BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0118c.1
         (565 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

M310_ARATH (P93295) Hypothetical mitochondrial protein AtMg00310...   110  1e-23
CAPP_BRAJA (Q89R17) Phosphoenolpyruvate carboxylase (EC 4.1.1.31...    35  0.40
THYG_RAT (P06882) Thyroglobulin precursor                              31  9.9
PO11_SCICO (Q03277) Retrovirus-related Pol polyprotein from type...    31  9.9
LGUL_HUMAN (Q04760) Lactoylglutathione lyase (EC 4.4.1.5) (Methy...    31  9.9

>M310_ARATH (P93295) Hypothetical mitochondrial protein AtMg00310
           (ORF154)
          Length = 154

 Score =  110 bits (274), Expect = 1e-23
 Identities = 54/150 (36%), Positives = 85/150 (56%), Gaps = 1/150 (0%)

Query: 10  LAIPSYVMSCFLLLDGLCSQIERMISRFYWGGDVSHRTMHWLKWDTLCRPK-GCGGIGFR 68
           +A+P Y MSCF L   LC ++   ++ F+W    + R + W+ W  LC+ K   GG+GFR
Sbjct: 1   MALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFR 60

Query: 69  DFKAFNTALLAKNWWRIMTKLKSMLAKIYKAVYFPKESFLEAKKGYRPSYVWLSLQKSAW 128
           D   FN ALLAK  +RI+ +  ++L+++ ++ YFP  S +E   G RPSY W S+     
Sbjct: 61  DLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRE 120

Query: 129 IFQEGGLWRVGNGKNIRA*EDKWVPHGGPL 158
           +   G L  +G+G + +   D+W+    PL
Sbjct: 121 LLSRGLLRTIGDGIHTKVWLDRWIMDETPL 150


>CAPP_BRAJA (Q89R17) Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
           (PEPCase) (PEPC)
          Length = 932

 Score = 35.4 bits (80), Expect = 0.40
 Identities = 59/238 (24%), Positives = 96/238 (39%), Gaps = 15/238 (6%)

Query: 262 ADAVPQCCETAWRACLDILPVRSILHRRGVV--GNPCCPRCSEVEETVHHALFSCPLVRM 319
           +DA+PQC  +  +   D+L V  +L   G+V            + ET+     S  ++  
Sbjct: 506 SDAIPQCIISMCKGMSDMLEVAVLLKEVGLVHPSGRSAINIVPLFETIEDLQASSAIMDR 565

Query: 320 IWFASPLNLRFDEEGSVHDFFLSFLATADTNIAGIFLAVLYSVWQARNELLFKWKDSSID 379
           +          D  GSV +  L +   +D+N  G F+   + +++A   L+  ++   + 
Sbjct: 566 MLSLHDYRRLVDSRGSVQEVMLGY---SDSNKDGGFVTSGWELYKAEINLVDVFERHHVR 622

Query: 380 QLLQRASSLRPSRVLLDDGPRAVQVLPSSWSRPLSGVCKMNIDASVTSSKEAGAGMVMRN 439
             L      R   V    GP +   + +     ++G  ++     + SSK + A  V RN
Sbjct: 623 LRLFHG---RGGSVGRGGGP-SYDAIIAQPGGAVNGQIRITEQGEIISSKYSNA-EVGRN 677

Query: 440 NHGEVLAAATTE---LGPVLSPVLAEALGMRWALRLATKLGFRRIWIETDCLELYTFW 494
           N  E+LAAAT E   L P  S    E L     L       +R +  ETD    Y FW
Sbjct: 678 NL-EILAAATLEASLLHPRQSAPRREYLTAMDELSSLAFRAYRGLVYETDGFVDY-FW 733


>THYG_RAT (P06882) Thyroglobulin precursor
          Length = 2768

 Score = 30.8 bits (68), Expect = 9.9
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 4/35 (11%)

Query: 182  GCWDRNKVEFLCWPPTARAILSIPLPLQQRDDCFF 216
            G WD  K+   CW P  R     P P Q  +DC +
Sbjct: 2254 GSWDATKLRSSCWQPGTRT----PTPPQISEDCLY 2284


>PO11_SCICO (Q03277) Retrovirus-related Pol polyprotein from type I
           retrotransposable element R1 [Contains: Reverse
           transcriptase (EC 2.7.7.49); Endonuclease] (Fragment)
          Length = 1004

 Score = 30.8 bits (68), Expect = 9.9
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 282 VRSILHRRGVVGNPCCPRCSEVEETVHHALFSCPL 316
           +   LH+RG+   P C  C    E V H L  CPL
Sbjct: 915 MNGFLHKRGLSNTPVC-MCGAPNEDVKHLLGECPL 948


>LGUL_HUMAN (Q04760) Lactoylglutathione lyase (EC 4.4.1.5)
           (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx
           I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione
           methylglyoxal lyase)
          Length = 183

 Score = 30.8 bits (68), Expect = 9.9
 Identities = 24/85 (28%), Positives = 31/85 (36%), Gaps = 3/85 (3%)

Query: 468 WALRLATKLGFRRIW-IETDCLELYTFWNRQGGEFSHLATVVFDCRSLLPNFDVFNFTFV 526
           WAL     L     W  E D  + Y   N     F H+   V D  S    F+     FV
Sbjct: 90  WALSRKATLELTHNWGTEDDATQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFV 149

Query: 527 RRTSNGAADALARLAFHYGCMIWIE 551
           ++  +G    LA +    G   WIE
Sbjct: 150 KKPDDGKMKGLAFIQDPDG--YWIE 172


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.326    0.139    0.464 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,289,549
Number of Sequences: 164201
Number of extensions: 2865843
Number of successful extensions: 6571
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 6568
Number of HSP's gapped (non-prelim): 5
length of query: 565
length of database: 59,974,054
effective HSP length: 115
effective length of query: 450
effective length of database: 41,090,939
effective search space: 18490922550
effective search space used: 18490922550
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 68 (30.8 bits)