
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0117b.14
(458 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MINT_HUMAN (Q96T58) Msx2-interacting protein (SMART/HDAC1 associ... 39 0.036
IE68_SHV21 (Q01042) Immediate-early protein 37 0.11
ERF2_PICPI (P23637) Eukaryotic peptide chain release factor GTP-... 36 0.18
ECX1_METMA (Q8PTT8) Probable exosome complex exonuclease 1 (EC 3... 36 0.24
VATE_ARCFU (O29104) V-type ATP synthase subunit E (EC 3.6.3.14) ... 35 0.40
TRT2_BOVIN (P13789) Troponin T, cardiac muscle isoforms (TnTC) (... 35 0.53
KTN1_CHICK (Q90631) Kinectin 35 0.53
OS9_HUMAN (Q13438) Protein OS-9 precursor 34 0.69
DEK_HUMAN (P35659) DEK protein 34 0.69
VNCS_PAVBO (P07296) Noncapsid protein NS-1 (Nonstructural protei... 34 0.90
MACF_HUMAN (Q9UPN3) Microtubule-actin crosslinking factor 1, iso... 34 0.90
MAC4_HUMAN (Q96PK2) Microtubule-actin crosslinking factor 1, iso... 34 0.90
CALG_MOUSE (P52194) Calmegin precursor (MEG 1 antigen) (Calnexin... 34 0.90
YDH3_PLAFS (P14589) Hypothetical protein 3' to Asp-rich and His-... 33 1.2
Y24K_EHV4 (P22598) Hypothetical 24.6 kDa protein in GP13 3'regio... 33 1.2
MYS9_DROME (Q01989) Myosin heavy chain 95F (95F MHC) (Jaguar pro... 33 1.2
RPOD_PSEPU (P52327) RNA polymerase sigma factor rpoD (Sigma-70) 33 1.5
RPOD_PSEFL (P52326) RNA polymerase sigma factor rpoD (Sigma-70) 33 1.5
NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neur... 33 1.5
GRPE_NITEU (O08384) GrpE protein (HSP-70 cofactor) 33 1.5
>MINT_HUMAN (Q96T58) Msx2-interacting protein (SMART/HDAC1 associated
repressor protein)
Length = 3664
Score = 38.5 bits (88), Expect = 0.036
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 71 EPELEPYMPEPVQDSEEEEIPGKQEVLEAERRTVVVEAKPEANSVLLAKSEIKPYSPENS 130
EP+ + +P Q SEE P +AE+ +A+P+AN A E +P + E+
Sbjct: 1752 EPDSTQPLSKPAQKSEEANEP------KAEKPDATADAEPDANQKAEAAPESQPPASEDL 1805
Query: 131 EME--ASRKDSEFAMAAEQTAEVSRCQPVTVVDYIDCTLTAKGEKIDAEGEIKIKR 184
E++ + KD + + V V ++ +T K E+ID E K+KR
Sbjct: 1806 EVDPPVAAKDKKPNKSKRSKTPVQ----AAAVSIVEKPVTRKSERIDRE---KLKR 1854
>IE68_SHV21 (Q01042) Immediate-early protein
Length = 407
Score = 37.0 bits (84), Expect = 0.11
Identities = 36/129 (27%), Positives = 53/129 (40%), Gaps = 11/129 (8%)
Query: 22 EAKGVSEEEKFSGAEKALTGEAFMWWFCWRRRNQKATWWEFVEALLRKFEPELEPYMPEP 81
EA+ EE+ + E+A EA ++A E EA E E E E
Sbjct: 122 EAEEAEAEEEEAEEEEAEEEEA-----------EEAEEEEAEEAEEEAEEEEAEEEAEEE 170
Query: 82 VQDSEEEEIPGKQEVLEAERRTVVVEAKPEANSVLLAKSEIKPYSPENSEMEASRKDSEF 141
+++EE E ++E EAE EA+ EA E + + E E E + + E
Sbjct: 171 AEEAEEAEEEAEEEAEEAEEAEEAEEAEEEAEEAEEEAEEAEEEAEEAEEAEEAEEAEEE 230
Query: 142 AMAAEQTAE 150
A AE+ E
Sbjct: 231 AEEAEEEEE 239
>ERF2_PICPI (P23637) Eukaryotic peptide chain release factor
GTP-binding subunit (ERF2) (Translation release factor
3) (ERF3) (ERF-3) (Omnipotent suppressor protein 2)
Length = 741
Score = 36.2 bits (82), Expect = 0.18
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 80 EPVQDSEEEEIPGKQEV-----LEAERRTVVVEAKPEANSVLLAKSEIK-PYSPENSEME 133
EPV + E P K+E+ EAE + V E+K EA + SE + P S +E +
Sbjct: 207 EPVNQESKTEEPAKEEIKNQEPAEAENK-VEEESKVEAPTAAKPVSESEFPASTPKTEAK 265
Query: 134 ASRKDSEFAMAAEQTAEVSRCQPVTVVDYIDCTLTAKGEKIDA 176
AS++ + A AA EVS+ + + V D + + E+IDA
Sbjct: 266 ASKEVA--AAAAALKKEVSQAKKESNVTNADALVKEQEEQIDA 306
>ECX1_METMA (Q8PTT8) Probable exosome complex exonuclease 1 (EC
3.1.13.-)
Length = 493
Score = 35.8 bits (81), Expect = 0.24
Identities = 33/114 (28%), Positives = 52/114 (44%), Gaps = 5/114 (4%)
Query: 70 FEPELEPYMPEPVQDSEEEEIPGKQEVLEAERRTVVVEAKPEANSVLLAKSEIKPYSPEN 129
FE ELE + E +++SEE+ + E E E + EA+PE + + ++ E
Sbjct: 299 FEDELEEEIEEELEESEEDL---ETEEEEFEEEALEEEAEPEEDLEEDLEEDLGEELEEE 355
Query: 130 SEMEASRKDSEFAMAAEQTAEVS-RCQP-VTVVDYIDCTLTAKGEKIDAEGEIK 181
E + E A+ E E S C P + D I+ L + I+AE EI+
Sbjct: 356 EEELEEEEFEEEALEEETELEASLECAPELKEFDEIEARLEKEDASIEAEEEIE 409
>VATE_ARCFU (O29104) V-type ATP synthase subunit E (EC 3.6.3.14)
(V-type ATPase subunit E)
Length = 188
Score = 35.0 bits (79), Expect = 0.40
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 80 EPVQDSEEEEIPGKQEVLEAERRTVVVEAKPEANSVLLAKSEIKPYSPENSEMEASRKDS 139
+ +Q EEE+ +E E E ++ EAK EA +L K E EA R+
Sbjct: 8 QEIQQKGEEEVRRIREETEKEVEKILAEAKAEAEEILK-----KAREEAEKEAEAIRRQE 62
Query: 140 EFAMAAEQTAEVSRCQPVTVVDYIDCTLTAKGEKIDAEGEIKI-KRLQEGSSMEKWQICS 198
++ E E+ Q +++ + L K +D E KI K L E ++
Sbjct: 63 ISSVKLEMKRELLNVQK-EILEEVFNLLRQKVRDMDEETRKKILKNLLEKNASPG---MV 118
Query: 199 IHGRKKVQPIVLPQISDLGFD 219
++ RK+ + IV I +L D
Sbjct: 119 VYSRKEDEDIVKELIKELKLD 139
>TRT2_BOVIN (P13789) Troponin T, cardiac muscle isoforms (TnTC)
(cTnT)
Length = 284
Score = 34.7 bits (78), Expect = 0.53
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 12/136 (8%)
Query: 17 VEQHCEAKGVSEEEKFSGAEKALTGEAFMWWFCWRRRNQKATWWEFVEALLRKFEPELEP 76
VE++ E + +EEE E+ GEA C ++ E + + +F+P+ P
Sbjct: 7 VEEYEEQEEAAEEEHEEAVEEEAGGEAEAGEPCTAEDGEEEEGREAEDGPVEEFKPKPRP 66
Query: 77 YMPE----PVQDSEE---EEIPGKQEVLEAERRTVVVEA-----KPEANSVLLAKSEIKP 124
+MP + D E ++I K+ + ++EA K E ++ K I+
Sbjct: 67 FMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQTLIEAHFENRKKEEEELVSLKDRIEK 126
Query: 125 YSPENSEMEASRKDSE 140
E +E + R + E
Sbjct: 127 RRAERAEQQRIRAERE 142
>KTN1_CHICK (Q90631) Kinectin
Length = 1364
Score = 34.7 bits (78), Expect = 0.53
Identities = 29/115 (25%), Positives = 53/115 (45%), Gaps = 5/115 (4%)
Query: 73 ELEPYMPEPVQDSEEEEIPGKQEVLEAERRTVVVEAKPEANSVLLAKSEIKPYSPENSEM 132
E E + + EEEE K +V E+++ E K +SV + E++ E E+
Sbjct: 1151 ETEGILQRLQRSVEEEESKWKIKVEESQK-----ELKQMRSSVASLEHEVERLKEEIKEV 1205
Query: 133 EASRKDSEFAMAAEQTAEVSRCQPVTVVDYIDCTLTAKGEKIDAEGEIKIKRLQE 187
E +K+ E + + AE+ R V+ V + LT +K+D +++ +E
Sbjct: 1206 ETLKKEREHLESELEKAEIERSTYVSEVRELKDLLTELQKKLDDSYSEAVRQNEE 1260
>OS9_HUMAN (Q13438) Protein OS-9 precursor
Length = 667
Score = 34.3 bits (77), Expect = 0.69
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 12/137 (8%)
Query: 71 EPELEPYMPEPVQDSEEEEIPGKQEVLEAERRTVVVEAKPEANSVLLAKSEIKPYSPENS 130
EPE E PE ++ EEEE + E + + R ++ E + E +LL + S +
Sbjct: 399 EPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSEVKA 458
Query: 131 EMEASRKDSEFAMAAEQTAEVSRCQPVTVVDYIDCTLTAKGEKIDAEGEIKIKRLQEGSS 190
ME R+ E+ + + + D LT+ K+ IKRL+E S
Sbjct: 459 GME--RELENIIQETEKELDPDGLKKESERDRAMLALTSTLNKL-------IKRLEEKQS 509
Query: 191 MEKWQICSIHGRKKVQP 207
E + H +K+V P
Sbjct: 510 PE---LVKKHKKKRVVP 523
>DEK_HUMAN (P35659) DEK protein
Length = 375
Score = 34.3 bits (77), Expect = 0.69
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 73 ELEPYMPEPVQDSEEEEIPGKQEVLEAER-RTVVVEAKPEANSV 115
E EP MP P ++SEEEE +E E E+ ++++VE K E V
Sbjct: 20 EKEPEMPGPREESEEEEDEDDEEEEEEEKEKSLIVEGKREKKKV 63
>VNCS_PAVBO (P07296) Noncapsid protein NS-1 (Nonstructural protein
NS1)
Length = 726
Score = 33.9 bits (76), Expect = 0.90
Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 20/148 (13%)
Query: 81 PVQDSEEEEIPGKQEVLEAERRTVVVEAKPEANSVLLAKS----EIKPYSPENSEMEASR 136
P + E EEIP E LE R V + + NS+ + + P PE E + +R
Sbjct: 557 PDRAEEIEEIPS--ECLEWMREEVDRLSAHDINSLAHQATGFILDPIPEEPEEGERDLAR 614
Query: 137 KDSEFAMAAEQTAEVSRC-----------QPVTVVDYIDCTLTAKGEKIDAE---GEIKI 182
+D+E + T R QP+T D+ID K +++ E GE +
Sbjct: 615 EDAEPEASTSHTPATKRARVEEGEPWDGTQPITEGDWIDFESRQKRRRLEREEKGGEDED 674
Query: 183 KRLQEGSSMEKWQICSIHGRKKVQPIVL 210
+QE + I + +PIVL
Sbjct: 675 MEVQESDPSAWGEKLGIVEKPGEEPIVL 702
>MACF_HUMAN (Q9UPN3) Microtubule-actin crosslinking factor 1, isoforms
1/2/3 (Actin cross-linking family protein 7) (Macrophin
1) (Trabeculin-alpha) (620 kDa actin-binding protein)
(ABP620)
Length = 5430
Score = 33.9 bits (76), Expect = 0.90
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 19 QHCEAKGVSEEEKFSGAEKALTGEAFMWWFCWRRRNQKATWWEFVEALLRKFEPELEPYM 78
Q EA + E+++ E+A + + F W + + W E AL+ + +
Sbjct: 3801 QQYEAISLLNSERYARLERA---QVLVNQF-WETYEELSPWIEETRALIAQ--------L 3848
Query: 79 PEPVQDSEEEEIPGKQEVLEAERRTVVVEAKPEANSVLLAKSEIKPYSPENSEMEASRKD 138
P P D E++ +QE + R ++ E KP + +L ++K +PE EM +
Sbjct: 3849 PSPAID--HEQLRQQQEEMRQLRESIA-EHKPHIDKLLKIGPQLKELNPEEGEMVEEKYQ 3905
Query: 139 SEFAMAAEQTAEV 151
M A+ EV
Sbjct: 3906 KAENMYAQIKEEV 3918
>MAC4_HUMAN (Q96PK2) Microtubule-actin crosslinking factor 1, isoform
4
Length = 5938
Score = 33.9 bits (76), Expect = 0.90
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 19 QHCEAKGVSEEEKFSGAEKALTGEAFMWWFCWRRRNQKATWWEFVEALLRKFEPELEPYM 78
Q EA + E+++ E+A + + F W + + W E AL+ + +
Sbjct: 4303 QQYEAISLLNSERYARLERA---QVLVNQF-WETYEELSPWIEETRALIAQ--------L 4350
Query: 79 PEPVQDSEEEEIPGKQEVLEAERRTVVVEAKPEANSVLLAKSEIKPYSPENSEMEASRKD 138
P P D E++ +QE + R ++ E KP + +L ++K +PE EM +
Sbjct: 4351 PSPAID--HEQLRQQQEEMRQLRESIA-EHKPHIDKLLKIGPQLKELNPEEGEMVEEKYQ 4407
Query: 139 SEFAMAAEQTAEV 151
M A+ EV
Sbjct: 4408 KAENMYAQIKEEV 4420
>CALG_MOUSE (P52194) Calmegin precursor (MEG 1 antigen) (Calnexin-T)
(A2/6)
Length = 611
Score = 33.9 bits (76), Expect = 0.90
Identities = 30/104 (28%), Positives = 42/104 (39%), Gaps = 16/104 (15%)
Query: 48 FCWRRRNQKA-----------TWWEFVEALLRKFEPELEPYMPEPVQDSEEEEIPGKQEV 96
FCW R+ +K + AL ++ E E P PE VQ EE+ PG+ EV
Sbjct: 490 FCWPRKVKKKYEDTGPKKTELCKLQSKAALEQEAEEEKAPEKPEDVQ---EEKKPGEAEV 546
Query: 97 LEAERRTV--VVEAKPEANSVLLAKSEIKPYSPENSEMEASRKD 138
+ E+ + E E L + E+ S SE E D
Sbjct: 547 VTVEKEVIGEPEEKSKEDRETLEGQEEVSKLSKSGSEDEMKDAD 590
>YDH3_PLAFS (P14589) Hypothetical protein 3' to Asp-rich and
His-rich proteins (Fragment)
Length = 53
Score = 33.5 bits (75), Expect = 1.2
Identities = 11/24 (45%), Positives = 15/24 (61%), Gaps = 1/24 (4%)
Query: 44 FMWWFCWRRRNQKATWWEFVEALL 67
F WW CWRRR + WW ++ +L
Sbjct: 11 FRWW-CWRRRGWRRRWWLVIKLML 33
>Y24K_EHV4 (P22598) Hypothetical 24.6 kDa protein in GP13 3'region
(ORF3)
Length = 226
Score = 33.5 bits (75), Expect = 1.2
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 210 LPQISDLGFDWERRPPRKPPDSCLCTAVTANRLPDTFFCWTEVFIQTSVLCSSMVAIQLE 269
LPQ ++L + RRP R+ CLC T T + + T VL MVA++
Sbjct: 44 LPQPTELVYTKRRRPKRRSRCRCLC--FTMGMFAMGVLMTTTLLVSTFVLTVPMVALRTA 101
Query: 270 TKPPDRSGGSSHFILGDSC 288
P G LGD C
Sbjct: 102 PCPAQTFG------LGDEC 114
>MYS9_DROME (Q01989) Myosin heavy chain 95F (95F MHC) (Jaguar
protein)
Length = 1256
Score = 33.5 bits (75), Expect = 1.2
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Query: 63 VEALLRKFEPELEPYMPEPVQDSEEEEIPGKQEVLEAERRTVVVEAKPE----ANSVLLA 118
V A + K +L + E Q E+E + QE LEAER E + + N L A
Sbjct: 901 VMANMNKLTVDLNTKLKEQQQAEEQERLRKIQEALEAERAAKEAEEQRQREEIENKRLKA 960
Query: 119 KSEIKPYSPENSEMEASRKDSEFAMAAEQTAE 150
+ E + + E + +D A+A ++ E
Sbjct: 961 EMETRRKAAEAQRLRQEEEDRRAALALQEQLE 992
>RPOD_PSEPU (P52327) RNA polymerase sigma factor rpoD (Sigma-70)
Length = 614
Score = 33.1 bits (74), Expect = 1.5
Identities = 32/119 (26%), Positives = 61/119 (50%), Gaps = 21/119 (17%)
Query: 73 ELEPYMPEPVQDSEEEEIPGKQEVLEA--ERRTVVVEAKPEANSVLLAKSEIKPYSPENS 130
E+ ++PE + D E+ E +++ + V E+ P+A+++LLA+++
Sbjct: 28 EVNDHLPEDISDPEQVE-----DIIRMINDMGINVFESAPDADALLLAEADTD------- 75
Query: 131 EMEASRKDSEFAMAAEQTAEVSRCQPVTVVDYIDCTLTAKGEKIDAEGEIKI-KRLQEG 188
EA+ +++ A+AA +T PV + T+ E + EGEI+I KR++EG
Sbjct: 76 --EAAAEEAAAALAAVETDIRRTTDPVRMYMREMGTV----ELLTREGEIEIAKRIEEG 128
>RPOD_PSEFL (P52326) RNA polymerase sigma factor rpoD (Sigma-70)
Length = 615
Score = 33.1 bits (74), Expect = 1.5
Identities = 32/119 (26%), Positives = 61/119 (50%), Gaps = 21/119 (17%)
Query: 73 ELEPYMPEPVQDSEEEEIPGKQEVLEA--ERRTVVVEAKPEANSVLLAKSEIKPYSPENS 130
E+ ++PE + D E+ E +++ + V E+ P+A+++LLA+++
Sbjct: 28 EVNDHLPEDISDPEQVE-----DIIRMINDMGINVFESAPDADALLLAEADTD------- 75
Query: 131 EMEASRKDSEFAMAAEQTAEVSRCQPVTVVDYIDCTLTAKGEKIDAEGEIKI-KRLQEG 188
EA+ +++ A+AA +T PV + T+ E + EGEI+I KR++EG
Sbjct: 76 --EAAAEEAAAALAAVETDIGRTTDPVRMYMREMGTV----ELLTREGEIEIAKRIEEG 128
>NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa
neurofilament protein) (Neurofilament medium
polypeptide) (NF-M) (Fragment)
Length = 810
Score = 33.1 bits (74), Expect = 1.5
Identities = 25/95 (26%), Positives = 43/95 (44%), Gaps = 2/95 (2%)
Query: 61 EFVEALLRKFEPELEPYMPEPVQDSEEEE--IPGKQEVLEAERRTVVVEAKPEANSVLLA 118
+FVE ++ + + E E E + EE + K+EV E E + + E V
Sbjct: 336 KFVEEIIEETKVEDEKSEMEEALTAITEELAVSVKEEVKEEEAEEKEEKEEAEEEVVAAK 395
Query: 119 KSEIKPYSPENSEMEASRKDSEFAMAAEQTAEVSR 153
KS +K +PE E E +++ E E+ E ++
Sbjct: 396 KSPVKATAPELKEEEGEKEEEEGQEEEEEEEEAAK 430
>GRPE_NITEU (O08384) GrpE protein (HSP-70 cofactor)
Length = 195
Score = 33.1 bits (74), Expect = 1.5
Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 21/142 (14%)
Query: 75 EPYMPEPVQDSEEEEIPGKQEVLEAERRTVVV--------EAKPEANSVLLAKSEIKPYS 126
EP+ EP+ E++++PG +VLE E V +A P L ++EI+
Sbjct: 3 EPHDQEPI---EKQKLPGMDDVLETEHSGTVAGNTERAGEDAAPSLEQ-QLKEAEIRAAE 58
Query: 127 PENSEMEA--------SRKDSEFAMAAEQTAEVSRCQPVTVVDYIDCTLTAKGEKID-AE 177
++ + A R ++ A A + + Q + V+D +D L + ++
Sbjct: 59 HHDAWLRAKAETENIRKRAQTDIASAHKYAIDNFSVQLLAVMDSLDAALATENSTLENLR 118
Query: 178 GEIKIKRLQEGSSMEKWQICSI 199
+++ R Q + EK+ I +I
Sbjct: 119 DGVELTRKQLAAVFEKFNIHTI 140
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.320 0.135 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,046,126
Number of Sequences: 164201
Number of extensions: 2290801
Number of successful extensions: 6005
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 5966
Number of HSP's gapped (non-prelim): 69
length of query: 458
length of database: 59,974,054
effective HSP length: 114
effective length of query: 344
effective length of database: 41,255,140
effective search space: 14191768160
effective search space used: 14191768160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0117b.14