BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0111a.4
         (74 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ACD8_MOUSE (Q9D7B6) Acyl-CoA dehydrogenase family member 8, mito...    28  4.3
ACD8_HUMAN (Q9UKU7) Acyl-CoA dehydrogenase family member 8, mito...    28  4.3
YB28_MYCTU (O06580) Hypothetical protein Rv1128c/MT1160                27  9.6
LRF5_MOUSE (Q8BXA0) Leucine rich repeat and fibronectin type III...    27  9.6
A2MG_MOUSE (Q61838) Alpha-2-macroglobulin precursor (Alpha-2-M)        27  9.6

>ACD8_MOUSE (Q9D7B6) Acyl-CoA dehydrogenase family member 8,
           mitochondrial precursor (EC 1.3.99.-) (ACAD-8)
           (Isobutyryl-CoA dehydrogenase)
          Length = 413

 Score = 28.1 bits (61), Expect = 4.3
 Identities = 11/27 (40%), Positives = 13/27 (47%)

Query: 13  AWMLAMNVNHENNHELCAPECTSTSIA 39
           AWM+    N E  H+ C P CT    A
Sbjct: 128 AWMIDSFGNEEQRHKFCPPLCTMEKFA 154


>ACD8_HUMAN (Q9UKU7) Acyl-CoA dehydrogenase family member 8,
           mitochondrial precursor (EC 1.3.99.-) (ACAD-8)
           (Isobutyryl-CoA dehydrogenase) (Activator-recruited
           cofactor 42 kDa component) (ARC42)
          Length = 415

 Score = 28.1 bits (61), Expect = 4.3
 Identities = 11/27 (40%), Positives = 13/27 (47%)

Query: 13  AWMLAMNVNHENNHELCAPECTSTSIA 39
           AWM+    N E  H+ C P CT    A
Sbjct: 130 AWMIDSFGNEEQRHKFCPPLCTMEKFA 156


>YB28_MYCTU (O06580) Hypothetical protein Rv1128c/MT1160
          Length = 451

 Score = 26.9 bits (58), Expect = 9.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 31  PECTSTSIAVWDIPKCSGLCNPEKR 55
           PE  +T  AVW      G+CNPE++
Sbjct: 215 PELRATIEAVWAKLAAPGMCNPEQK 239


>LRF5_MOUSE (Q8BXA0) Leucine rich repeat and fibronectin type III
           domain containing protein 5 precursor
          Length = 719

 Score = 26.9 bits (58), Expect = 9.6
 Identities = 13/43 (30%), Positives = 19/43 (43%)

Query: 20  VNHENNHELCAPECTSTSIAVWDIPKCSGLCNPEKRMLELHQM 62
           ++ E++ E CA     T    W IP+   LC P       H+M
Sbjct: 254 LSREDDLETCASPALLTGRYFWSIPEEEFLCEPPLITRHTHEM 296


>A2MG_MOUSE (Q61838) Alpha-2-macroglobulin precursor (Alpha-2-M)
          Length = 1495

 Score = 26.9 bits (58), Expect = 9.6
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 8   DVTIGAWMLAMNVN-HENNHELCAPECTSTSIAVWDIPKCSGLCNPEKRMLELHQMESC 65
           D+ I    LA+ V  HEN+H +C  E  + S AV   PK  G  N  +    L   E C
Sbjct: 839 DLEISPDFLAVPVGGHENSHCICGNERKTVSWAV--TPKSLGEVNFTRTAEALESQELC 895


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.317    0.127    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,898,333
Number of Sequences: 164201
Number of extensions: 281197
Number of successful extensions: 537
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 533
Number of HSP's gapped (non-prelim): 5
length of query: 74
length of database: 59,974,054
effective HSP length: 50
effective length of query: 24
effective length of database: 51,764,004
effective search space: 1242336096
effective search space used: 1242336096
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)