BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0110a.10
         (1408 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

HIS4_LISMO (Q8Y9G4) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylami...    35  1.4
VHSJ_LAMBD (P03749) Host specificity protein J                         33  4.2
VNN3_HUMAN (Q9NY84) Vascular non-inflammatory molecule 3 precurs...    33  7.2
VU84_HHV7J (P52534) Protein U84                                        32  9.4
CDAS_THEET (P29964) Cyclomaltodextrinase (EC 3.2.1.54) (CDase) (...    32  9.4
BAG_STRAG (P27951) IgA FC receptor precursor (Beta antigen) (B a...    32  9.4

>HIS4_LISMO (Q8Y9G4)
           1-(5-phosphoribosyl)-5-[(5-
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase (EC 5.3.1.16)
           (Phosphoribosylformimino-5-aminoimidazole carboxamide
           ribotide isomerase)
          Length = 240

 Score = 35.0 bits (79), Expect = 1.4
 Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 3/98 (3%)

Query: 570 MKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFV-VPYNPKLL-- 626
           +KNG+C + F   ++  T  + D     +   T  +T    VDLD      P N +++  
Sbjct: 9   LKNGQCVRLFQGDFSKKTVVNEDPIAQAKAFATDGATYLHIVDLDGALEGRPINLEVIQK 68

Query: 627 MKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSMSS 664
           MK  A I ++      S+  +  Y+  G+DRV +  ++
Sbjct: 69  MKITAKIPVQVGGGIRSMAQVDYYLESGIDRVIIGSAA 106


>VHSJ_LAMBD (P03749) Host specificity protein J
          Length = 1132

 Score = 33.5 bits (75), Expect = 4.2
 Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 765 PELFVYDP--KSKSWHPRKQGESIGRMSFVPPGTGE-LYYLRMLLNVQRGCTKYEDLRSV 821
           P L VYDP  + + W   KQ   I ++       G  LY++   +N++ G   Y  +RSV
Sbjct: 733 PHLAVYDPTVQFEFWFSEKQIADIRQVETSTRYLGTALYWIAASINIKPGHDYYFYIRSV 792

Query: 822 NNNVHDTFRGACEALGLLKDDREFIDGILD 851
           N      F    EA+G   DD E   G LD
Sbjct: 793 NTVGKSAF---VEAVGRASDDAE---GYLD 816


>VNN3_HUMAN (Q9NY84) Vascular non-inflammatory molecule 3 precursor
           (Vanin 3)
          Length = 501

 Score = 32.7 bits (73), Expect = 7.2
 Identities = 29/108 (26%), Positives = 44/108 (39%), Gaps = 20/108 (18%)

Query: 25  PYLADCPELLSNLL------RNTDTRSRHFLDNIRSYNSMFAFTSIGGKVDCGLNDGRGP 78
           PYL D P+   N +      R  +T  +  L  +   NS++   +IG K  C  +D + P
Sbjct: 95  PYLEDIPDPGVNWIPCRDPWRFGNTPVQQRLSCLAKDNSIYVVANIGDKKPCNASDSQCP 154

Query: 79  P--------QFVISGQ-----NYHRIGSLVP-TEGDNPKFAQLYIYDT 112
           P          V   Q      YH+     P  + D PK ++L  +DT
Sbjct: 155 PDGRYQYNTDVVFDSQGKLLARYHKYNLFAPEIQFDFPKDSELVTFDT 202


>VU84_HHV7J (P52534) Protein U84
          Length = 310

 Score = 32.3 bits (72), Expect = 9.4
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 9/74 (12%)

Query: 624 KLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSMSS-----GRTTQDKPVEDDEI 678
           ++L+K   + N  Y  K + ++ +FK + + +     +  S           KP+   EI
Sbjct: 64  EMLLKADKYTNAIY--KHSKLRKIFKAVKENLSTTNFATKSKGIVHSNFNDSKPIHSPEI 121

Query: 679 KQY--FDCRYLSPC 690
           K Y  F+C ++ PC
Sbjct: 122 KNYTDFNCDFMHPC 135


>CDAS_THEET (P29964) Cyclomaltodextrinase (EC 3.2.1.54) (CDase)
           (Cyclomaltodextrin hydrolase, decycling)
          Length = 574

 Score = 32.3 bits (72), Expect = 9.4
 Identities = 19/81 (23%), Positives = 39/81 (47%), Gaps = 4/81 (4%)

Query: 674 EDDEIKQYFDCRYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLFKENEAIEDVL 733
           E++E+K    C       A+ R+F +   +K   +  +  +  +++V+   E E  ED+L
Sbjct: 496 ENEELKYGSFCTLY----AIGRVFAFKREYKGKSIIVVLNNSSKQEVIFLNEVEGKEDIL 551

Query: 734 RRNIVKNSMFLAWMDANCKYV 754
           +   +K S  L ++  N  Y+
Sbjct: 552 KMKELKRSGNLLYLQPNSAYI 572


>BAG_STRAG (P27951) IgA FC receptor precursor (Beta antigen) (B
           antigen)
          Length = 1164

 Score = 32.3 bits (72), Expect = 9.4
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 627 MKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSMSSGRTTQDK--PVEDDEIKQYFDC 684
           M YQ H  +E   +   ++Y+ KY +    +        RT +D    +E+D +K YF+ 
Sbjct: 647 MNYQLHAQMEMLTRK-VVQYMNKYPDNAEIKKIFESDMKRTKEDNYGSLENDALKGYFEK 705

Query: 685 RYLSPCEAVWRI 696
            +L+P   + +I
Sbjct: 706 YFLTPFNKIKQI 717


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.353    0.158    0.566 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 144,190,271
Number of Sequences: 164201
Number of extensions: 5619933
Number of successful extensions: 25099
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 25099
Number of HSP's gapped (non-prelim): 6
length of query: 1408
length of database: 59,974,054
effective HSP length: 123
effective length of query: 1285
effective length of database: 39,777,331
effective search space: 51113870335
effective search space used: 51113870335
T: 11
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.5 bits)
S2: 72 (32.3 bits)