BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0108.13
(1262 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PVA_PLAFA (P08116) Processed variable antigen (Fragment) 41 0.018
RN12_HUMAN (Q9NVW2) RING finger protein 12 (LIM domain interacti... 40 0.052
DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contai... 39 0.089
MAP2_RAT (P15146) Microtubule-associated protein 2 (MAP 2) (MAP-2) 39 0.12
FLR1_HUMAN (Q9NZU1) Leucine-rich repeat transmembrane protein FL... 38 0.15
VIL3_ARATH (O81645) Villin 3 37 0.26
YKF0_YEAST (P35736) Hypothetical 103.1 kDa protein in NUP120-CSE... 37 0.34
YM67_YEAST (Q03661) Hypothetical 187.1 kDa protein in GUA1-ERG8 ... 36 0.58
DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin... 35 0.99
DMP1_MOUSE (O55188) Dentin matrix acidic phosphoprotein 1 precur... 35 1.7
TEK3_HUMAN (Q9BXF9) Tektin-3 34 2.2
T2FA_DROME (Q05913) Transcription initiation factor IIF, alpha s... 34 2.2
NXF1_COTJA (P58797) Nuclear RNA export factor 1 (Tip associating... 34 2.2
LKAA_PASHA (P55117) Leukotoxin from serotype T10 34 2.2
KAR3_YEAST (P17119) Kinesin-like protein KAR3 (Nuclear fusion pr... 34 2.2
CTCF_CHICK (Q08705) Transcriptional repressor CTCF (CCCTC-bindin... 34 2.9
MAP2_MOUSE (P20357) Microtubule-associated protein 2 (MAP 2) 33 3.8
PGK1_RHINI (P29405) Phosphoglycerate kinase 1 (EC 2.7.2.3) 33 4.9
FAED_ECOLI (P06970) Outer membrane usher protein faeD precursor 33 4.9
SP41_YEAST (P38904) SPP41 protein 33 6.4
>PVA_PLAFA (P08116) Processed variable antigen (Fragment)
Length = 224
Score = 41.2 bits (95), Expect = 0.018
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 10/168 (5%)
Query: 257 GDSKVDGDEGKGEEDLLVRDAPFTGKAENSGEGLSRKDSKRNDSVLKSKYFSTAANHSFD 316
G+SK G+ + E ++ TG+++ +GE +SK ++KY +
Sbjct: 63 GESKETGESKETGESKETGESKETGESKETGESKETGESKETRIYEETKYNKITSEFRET 122
Query: 317 LDLYAGARSQTAFPGQIVQGPGFEACGGTNWPDNFVGTKKLGHCDKDEKGMGGQDFQLPL 376
++ S+ G V GP +E +N TKKL +++E G++
Sbjct: 123 ENVKITEESKDR-EGNKVSGP-YENSENSNVTSESEETKKLAEKEENEGEKLGENVNDGA 180
Query: 377 SSQSEKPSEPELKSESFTMRETNGSKLSSSQNLLESPMELNEREVSGE 424
S SE P + T +E NG+K SS + + P E NE++ +
Sbjct: 181 SENSEDP-------KKLTEQEENGTKESSEETKDDKPEE-NEKKADNK 220
>RN12_HUMAN (Q9NVW2) RING finger protein 12 (LIM domain interacting
RING finger protein) (RING finger LIM domain-binding
protein) (R-LIM) (NY-REN-43 antigen)
Length = 624
Score = 39.7 bits (91), Expect = 0.052
Identities = 47/176 (26%), Positives = 68/176 (37%), Gaps = 20/176 (11%)
Query: 10 SASAMEETLISRKRSNPSSSPPGALTRSRSQLFVHRNRSGQRRPDSGPRQGGLYSGLGGS 69
S+S+ + S S+PSSS G + + S LF G +G SG G+
Sbjct: 461 SSSSSSSSSSSSSSSSPSSSSGGESSETSSDLF------------EGSNEGSSSSGSSGA 508
Query: 70 SGNDEKREPPEEDDGDTLLVKYLRKKAKRDDDGGDLPRLLTK---DLRARRVYSPQSSAR 126
R P D+ +L L + ++D D PR LTK D A R + + +
Sbjct: 509 RREGRHRAPVTFDESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRSFGENDALK 568
Query: 127 ASLDLIDSDCADRKIAGLGFGSPSSEEKSGVHVDDVMIAVNSDCTDRKIADLGFGS 182
I K+ L P S E VH D ++ NS C + A L G+
Sbjct: 569 TCSVCITEYTEGNKLRKL----PCSHEYH-VHCIDRWLSENSTCPICRRAVLASGN 619
>DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contains:
Dentin phosphoprotein (Dentin phosphophoryn) (DPP);
Dentin sialoprotein (DSP)]
Length = 1253
Score = 38.9 bits (89), Expect = 0.089
Identities = 60/318 (18%), Positives = 107/318 (32%), Gaps = 12/318 (3%)
Query: 201 SPDLGISSQARDFDRANTDSSDHKQFEEGNDGDCSGKINDFDEEIVVTTPPDAELLGDSK 260
S D SS + D ++DSSD + N D S + D D+ DSK
Sbjct: 571 SSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSS-------DSSDSSDSK 623
Query: 261 VDGDEGKGEEDLLVRDAPFTGKAENSGEGLSRKDSKRNDSVLKSKYFSTAANHSFDLDLY 320
D K E D D+ NS + DS + + S S +++ S D
Sbjct: 624 --SDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSS-DSSSS 680
Query: 321 AGARSQTAFPGQIVQGPGFEACGGTNWPDNFVGTKKLGHCDKDEKGMGGQDFQLPLSSQS 380
+ + S + ++ + D+ + D D SS S
Sbjct: 681 SDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDS 740
Query: 381 EKPSEPELKSESFTMRETNGSKLSSSQNLLESPMELNEREVSGECLSVPSGDDKCFNESK 440
S+ S S +++ S SS + + ++ S + + D + +
Sbjct: 741 SDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNS 800
Query: 441 CDPAADSDGVKVVGNALHNDDFMQCSIHKNNLDYAKVTNDSGCTSVQLGVLNDDFILTTP 500
D + SD ++ + D S N+ D + +N S + + D +
Sbjct: 801 SDSSNSSDSSDSSDSS--DSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDSSDSDSSNR 858
Query: 501 PDAKIYDNSAVNVDRSKS 518
D+ +S+ + D S S
Sbjct: 859 SDSSNSSDSSDSSDSSNS 876
Score = 35.0 bits (79), Expect = 1.3
Identities = 66/327 (20%), Positives = 115/327 (34%), Gaps = 34/327 (10%)
Query: 123 SSARASLDLIDSDCADRKIAGLGFGSPSSEEKSGVHVDDVMIAVNSDCTDRKIADLGFGS 182
SS+ +S SD +D S SSE D + +SD ++ +D +
Sbjct: 685 SSSDSSNSSDSSDSSD--------SSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSN 736
Query: 183 SAEKGGLCVDDATMKVTVSPDLGISSQARDFDRAN--TDSSDHKQFEEGNDGDCSGKIND 240
S++ + + S D SS + D ++ +DSSD + ND S +D
Sbjct: 737 SSDSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSD 796
Query: 241 FDEEIVVTTPPDAELLGDSKVDGDEGKGEEDLLVRDAPFTGKAENSGEGLSRKDSKRNDS 300
+ D+ DS D D + D+ + + +S + DS +DS
Sbjct: 797 SSNSSDSSNSSDSSDSSDSS-DSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDSSDSDS 855
Query: 301 VLKSKYFSTAANHSFDLDLYAGARSQTAFPGQIVQGPGFEACGGTNWPDNFVGTKKLGHC 360
+S ++N S D + S + ++ D+ +
Sbjct: 856 SNRSD----SSNSSDSSDSSDSSNSSDS----------------SDSSDSSDSNESSNSS 895
Query: 361 DKDEKGMGGQDFQLPLSSQSEKPSEPELKSESFTMRETNGSKLSSSQNLLESPMELNERE 420
D + D SS S S+ S+S +N S S+S + S + +
Sbjct: 896 DSSDSS-NSSDSDSSDSSNSSDSSDSSNSSDS--SESSNSSDNSNSSDSSNSSDSSDSSD 952
Query: 421 VSGECLSVPSGDDKCFNESKCDPAADS 447
S S SGD ++S ++DS
Sbjct: 953 SSNSSDSSNSGDSSNSSDSSDSNSSDS 979
Score = 34.7 bits (78), Expect = 1.7
Identities = 55/293 (18%), Positives = 98/293 (32%), Gaps = 27/293 (9%)
Query: 167 NSDCTDRKIADLGFGSSAEKGGLCVDDATMKVTVSPDLGISSQARDFDRANTDSSDHKQF 226
+SD +D +D S++ D + S D SS + D ++DSSD
Sbjct: 968 SSDSSDSNSSDSSDSSNSSDSSDSSDSSD-----SSDSSDSSNSSD----SSDSSDSSDS 1018
Query: 227 EEGNDGDCSGKINDFDEEIVVTTPPDAELLGDSKVDGDEGKGEEDLLVRDAPFTGKAENS 286
+D S +D + + D+ DS D + D+ + + +S
Sbjct: 1019 SNSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSGSSDSSDSSDSSDS 1078
Query: 287 GEGLSRKDSKRNDSVLKSKYFSTAANHSFDLDLYAGARSQTAFPGQIVQGPGFEACGGTN 346
+ DS + +S S +++ S D ++ ++
Sbjct: 1079 SDSSDSSDSSDSSDSSESSDSSDSSDSSDSSD----------------SSDSSDSSDSSD 1122
Query: 347 WPDNFVGTKKLGHCDKDEKGMGGQDFQLPLSSQSEKPSEPELKSESFTMRETNGSKLSSS 406
D+ + D + SS S S+ S+S +++ S SS
Sbjct: 1123 SSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSD 1182
Query: 407 QNLLESPMELNEREVSGECLSVPSGDDKCFNESKCDPAADSDGVKVVGNALHN 459
N ES + + S S S D ++S D +SD GN +N
Sbjct: 1183 SN--ESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESDSQSKSGNGNNN 1233
>MAP2_RAT (P15146) Microtubule-associated protein 2 (MAP 2) (MAP-2)
Length = 1861
Score = 38.5 bits (88), Expect = 0.12
Identities = 39/177 (22%), Positives = 77/177 (43%), Gaps = 17/177 (9%)
Query: 379 QSEKPSEPELKSESFTM--------RETNGSKLSSSQNLLESPMELNEREVSGECLSVPS 430
Q + P SFT+ R T GS+ + +S +++ ++ SG S S
Sbjct: 308 QFDSPMPSPFHGGSFTLPLDTVKDERVTEGSQ-PFAPVFFQSDDKMSLQDTSGSATSKES 366
Query: 431 GDDKCFNESKCDPAAD---SDGVKVVGNALHNDDFMQCSIHKNNLDYAKVTNDSGCTSVQ 487
D+ + K D AD S+ V+G+ + ++ + +N K T D
Sbjct: 367 SKDEEPQKDKADKVADVPVSEATTVLGDV--HSPAVEGFVGENISGEEKGTTDQEKKETS 424
Query: 488 LGVLNDDFILTTPPDAKIYDNSAVNVDRSKSVPQDMKRLKPMD---LRTNTQESFSK 541
+ + + T P K+ + S V+++ + + ++ +LK ++T+T++SFSK
Sbjct: 425 TPSVQEPTLTETEPQTKLEETSKVSIEETVAKEEESLKLKDDKAGVIQTSTEQSFSK 481
>FLR1_HUMAN (Q9NZU1) Leucine-rich repeat transmembrane protein FLRT1
precursor (Fibronectin-like domain-containing
leucine-rich transmembrane protein 1) (UNQ752/PRO1483)
Length = 646
Score = 38.1 bits (87), Expect = 0.15
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 47/233 (20%)
Query: 479 NDSGCTSVQLGVLNDDFILTTPPDAKIYDNSAVNVDRSKSVPQDMKRLKPMDLRTNTQES 538
ND G TS+ + +D L N+ +N + +PQD+K + N Q
Sbjct: 40 NDRGLTSIPADIPDDATTL-------YLQNNQIN---NAGIPQDLKT------KVNVQVI 83
Query: 539 FSKGVCLKADSRKDSLLKSKSVRRPHLPGKLFKTLGSVSKRFLPFLMELAKDDPGISKFG 598
+ + D + + +S+R HL +T+ S +P L +L DD +S
Sbjct: 84 Y----LYENDLDEFPINLPRSLRELHLQDNNVRTIARDSLARIPLLEKLHLDDNSVST-- 137
Query: 599 HGTPKKDEADMHGKRFELT------LSSQP-------EEASIDGHKIEKGPIHGTVESNA 645
+++A K+ +L LSS P EE +D ++I P+H N+
Sbjct: 138 --VSIEEDAFADSKQLKLLFLSRNHLSSIPSGLPHTLEELRLDDNRISTIPLHAFKGLNS 195
Query: 646 LGNILFNSANELSNGNLPKLTSS--QDLPELPMQSDVKEVVQECLSAPSVEEP 696
L ++ + N L+N + T S Q+L EL +V+ L+AP + P
Sbjct: 196 LRRLVLD-GNLLANQRIADDTFSRLQNLTEL-------SLVRNSLAAPPLNLP 240
>VIL3_ARATH (O81645) Villin 3
Length = 966
Score = 37.4 bits (85), Expect = 0.26
Identities = 43/170 (25%), Positives = 70/170 (40%), Gaps = 14/170 (8%)
Query: 967 SDLRATSGGDSNDSVPMEHFTANSGTKQQKELNACELNDDSSSPRSRSP----GFQSSNS 1022
S ++SG S+ S + + G +Q+ E A + +SSP S+SP G S S
Sbjct: 768 SAFNSSSGRTSSPSRDRSN-GSQGGPRQRAEALAALTSAFNSSPSSKSPPRRSGLTSQAS 826
Query: 1023 KCKVMQMCDEQVLLNGLCKPESSSGTPISVRRIDSPSTPLRPIVNEVMAREEATFALSES 1082
+ QVL + + S T S D ++ +EV A EEAT A E
Sbjct: 827 QRAAAVAALSQVL---TAEKKKSPDTSPSAEAKDEETS-----FSEVEATEEATEAKEEE 878
Query: 1083 LINSKVKGNCSFSISPDDKEKLSEAHGCCLSLSQLELKEKLEVPAVDFKK 1132
++ + + P + E G + +L+ K + V +DFK+
Sbjct: 879 EVSPAAEASAE-EAKPKQDDSEVETTGVTFTYERLQAKSEKPVTGIDFKR 927
>YKF0_YEAST (P35736) Hypothetical 103.1 kDa protein in NUP120-CSE4
intergenic region
Length = 922
Score = 37.0 bits (84), Expect = 0.34
Identities = 70/298 (23%), Positives = 114/298 (37%), Gaps = 35/298 (11%)
Query: 152 EEKSGVHVDDVMIAVNSDCTDRKIADLGFGSSAEKGGLCVDDATMKVTVSPDLGISSQAR 211
EE+S + V+ + + + K A GFG +A+ GG K+ DL A
Sbjct: 583 EERSKIQVEIERLVAS--IAEHKTAIHGFGETADAGGAIPAVQKQKIPTRKDL---LDAT 637
Query: 212 DFDRANTDSSDHKQFEEGNDGDCSGKINDFDEEIVVTT----------PPDAELLGDSKV 261
D + K+ E +C K DE I++ + E S+
Sbjct: 638 VNDPLVISAEMAKEEAEMATEECMLKELQVDEMIIIRNIMLRECEKKLEEEKETAKRSRR 697
Query: 262 DGDEGKGEE----DLLVRDAPFTGKAENSGEGLSRKDSKRNDSVLKSKYFSTAANHSFDL 317
+E K D+++ K G+ S KD V+KS++ ST N D+
Sbjct: 698 GTEESKNNSNFSRDVIMSTPDNNEKVTPIGKSASPKD------VVKSRFLSTY-NTGKDI 750
Query: 318 DLYAGARSQTAFPGQIVQGPGFEACGGTN-WPDNFVGTKKLGHCDKDEKGMGGQDFQLPL 376
D A ARS T G + GP N D+ V + K+ H D G + +
Sbjct: 751 DSSASARSITGVSGVLDDGPKTPTSNKENELIDDEVKSYKV-HQAVDGTG------EDSI 803
Query: 377 SSQSEKPSEPELKS-ESFTMRETNGSKLSSSQNLLESPMELNEREVSGECLSVPSGDD 433
+++ +K S P S S T+ + +K + Q L ++ +RE + + G D
Sbjct: 804 ANKRDKSSRPAANSGGSITIEQFLFNKNADKQGLSKTESVTMKREPVVDQMDSKKGHD 861
>YM67_YEAST (Q03661) Hypothetical 187.1 kDa protein in GUA1-ERG8
intergenic region
Length = 1658
Score = 36.2 bits (82), Expect = 0.58
Identities = 49/182 (26%), Positives = 73/182 (39%), Gaps = 33/182 (18%)
Query: 618 LSSQPEEASIDGHKIEKGPIHGTVESNALGNILFNSANELSNGNLPKLTSSQDLPELPMQ 677
L+S+PEEA + +IE GP S + +E GN+P S DLP P
Sbjct: 1407 LNSEPEEAELYELEIE-GPTETAASSKM-------NDDERQRGNIP----STDLPSDP-P 1453
Query: 678 SDVKEVVQECLSAPSVEEPIEKAVVGSKD----------ECSREPNFDLCSAIVDFHSTK 727
SD +EV + S EK+ S + E E N ++ + ++ H
Sbjct: 1454 SDKEEVTDSYPYSNSENITAEKSAPTSPEVYEIFSDTPNEVPMEINDEIPATTLEKHDKT 1513
Query: 728 IVAN---------DGHDVDIKHMQNSISSLQERGPSPKDQSM-LYVNVGVSNQTLEHHSS 777
V + HDVD + NSI+ G P+ Q++ + V V V + E S
Sbjct: 1514 NVTSVLDDRSEHLSSHDVDNEPHDNSINIKVNEGEEPEHQAVDIPVKVEVKEEQEEMPSK 1573
Query: 778 EV 779
V
Sbjct: 1574 SV 1575
>DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin
matrix protein-3) (DMP-3) [Contains: Dentin
phosphoprotein (Dentin phosphophoryn) (DPP); Dentin
sialoprotein (DSP)]
Length = 934
Score = 35.4 bits (80), Expect = 0.99
Identities = 53/268 (19%), Positives = 90/268 (32%), Gaps = 14/268 (5%)
Query: 183 SAEKGGLCVDDATMKVTVSPDLGISSQARDFDRANTDSSDHKQFEEGNDGDCSGKINDFD 242
SA + G D + S D S D ++ DSS + DGD + D
Sbjct: 472 SANESGSRGDASYTSDESSDDDNDSDSHAGEDDSSDDSSGDGDSDSNGDGDSESEDKDES 531
Query: 243 EEIVVTTPPDAELLGDSKVDGDEGKGEEDLLVRDAPFTGKAENSGEGLSRKDSKRNDSVL 302
+ D+E DS D+ D D+ + + +S + DS ++S
Sbjct: 532 DSSDHDNSSDSESKSDSSDSSDDSSDSSD--SSDSSDSSDSSDSSDSSDSSDSSDSNSSS 589
Query: 303 KSKYFSTAANHSFDLDLYAGARSQTAFPGQIVQGPGFEACGGTNWPDNFVGTKKLGHCDK 362
S S +++ S D + S + ++ ++ D+ + D
Sbjct: 590 DSSDSSGSSDSSDSSDTCDSSDSSDS----------SDSSDSSDSSDSSDSSDSSDSSDS 639
Query: 363 DEKGMGGQDFQLPLSSQSEKPSEPELKSESFTMRETNGSKLSSSQNLLESPMELNEREVS 422
+ S S S+ S+S +++ S SSS N +S + S
Sbjct: 640 SDSSSSSDSSDSSSCSDSSDSSDSSDSSDSSDSSDSSSSDSSSSSNSSDSSDSSDSSSSS 699
Query: 423 GECLSVPSGD--DKCFNESKCDPAADSD 448
S S D D + D +A SD
Sbjct: 700 DSSDSSDSSDSSDSSGSSDSSDSSASSD 727
Score = 34.3 bits (77), Expect = 2.2
Identities = 69/406 (16%), Positives = 128/406 (30%), Gaps = 11/406 (2%)
Query: 54 DSGPRQGGLYSGLGGSSGNDEKREPPEEDDGDTLLVKYLRKKAKRDDDGGDLPRLLTKDL 113
D G S G S +++K E D ++ + + DD D + D
Sbjct: 507 DDSSGDGDSDSNGDGDSESEDKDESDSSDHDNSSDSESKSDSSDSSDDSSD-----SSDS 561
Query: 114 RARRVYSPQSSARASLDLIDSDCADRKIAGLGFGSPSSEEKSGVHVDDVMIAVNSDCTDR 173
S S + S D DS ++ S S D + +SD +D
Sbjct: 562 SDSSDSSDSSDSSDSSDSSDSSDSNSSSDSSDSSGSSDSSDSSDTCDSSDSSDSSDSSDS 621
Query: 174 KIADLGFGSSAEKGGLCVDDATMKVTVSPDLGISSQARDFDRANTDSSDHKQFEEGNDGD 233
+ SS D++ S S + D +++ S +D
Sbjct: 622 SDSSDSSDSSDSSDSSDSSDSSSSSDSSDSSSCSDSSDSSDSSDSSDSSDSSDSSSSDSS 681
Query: 234 CSGKINDFDEEIVVTTPPDAELLGDSKVDGDEGKGEEDL----LVRDAPFTGKAENSGEG 289
S +D + ++ D+ DS D + G D D+ + + +S
Sbjct: 682 SSSNSSDSSDSSDSSSSSDSSDSSDSS-DSSDSSGSSDSSDSSASSDSSSSSDSSDSSSS 740
Query: 290 LSRKDSKRNDSVLKSKYFSTAANHSFDLDLYAGARSQTAFPGQIVQGPGFEACGGTNWPD 349
DS + S S ++N S D + S + ++ ++ D
Sbjct: 741 SDSSDSSDSSDSSDSSESSDSSNSSDSSDSSDSSDSSDSSDSSD-SSDSSDSSNSSDSSD 799
Query: 350 NFVGTKKLGHCDKDEKGMGGQDFQLPLSSQSEKPSEPELKSESFTMRETNGSKLSSSQNL 409
+ + + + SS S S+ S+S +++ S SS +
Sbjct: 800 SSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSD 859
Query: 410 LESPMELNEREVSGECLSVPSGDDKCFNESKCDPAADSDGVKVVGN 455
+ ++ S + + D ++SK + SDG GN
Sbjct: 860 SSDSSDSSDSSDSSDSSDSSNSSDSSDSDSKDSSSDSSDGDSKSGN 905
>DMP1_MOUSE (O55188) Dentin matrix acidic phosphoprotein 1 precursor
(Dentin matrix protein-1) (DMP-1) (AG1)
Length = 503
Score = 34.7 bits (78), Expect = 1.7
Identities = 94/467 (20%), Positives = 156/467 (33%), Gaps = 72/467 (15%)
Query: 16 ETLISRKRSNPSSSPPGALTRSRSQLFVHRNRSGQRRPD------SGPRQG---GLYSGL 66
E+ S +R++ + P T S S + Q D SG G G Y
Sbjct: 26 ESESSEERTDDLAGSPPPPTNSESSEESQASPEAQANSDHTHSSESGEELGYDRGQYRPA 85
Query: 67 GG---SSGNDEKREPPEEDDGDTLLVKYLRKKAKRDDDGGDLPRLLTKDLRARRVYSPQS 123
GG S+G ++ E+D GD + G +L + + A S +
Sbjct: 86 GGLSKSTGTGADKDDDEDDSGDDTFGDEDNGLGPEEGQWGGPSKLDSDEDSADTTQSSED 145
Query: 124 SARASLDLID--SDCADRKIAGLGFGSPSSEEKSGVHVDDVMIAVNSDCTDRKIADLGFG 181
S D SD D+ SE+ + D A +S+ ++++ G
Sbjct: 146 STSQENSAQDTPSDSKDQ----------DSEDDAHSRPDAGDSAQHSESEEQRVGGGSEG 195
Query: 182 SSAEKGGLCVDDATMKVTVSPD-------------LGISSQARDFDRANTDSSD------ 222
S+ G DD M+ + P+ GI S+ DR T + D
Sbjct: 196 QSSHGDGSEFDDEGMQ-SDDPESTRSDRGHARMSSAGIRSEESKGDREPTSTQDSDDSQS 254
Query: 223 -----HKQFEEG--NDGDCSGKINDFD-----EEIVVTTPPDAELLGDSKVDGDEGKGEE 270
K F ++ D G++ D + + T E +S+ D E + +E
Sbjct: 255 VEFSSRKSFRRSRVSEEDYRGELTDSNSRETQSDSTEDTASKEESRSESQEDTAESQSQE 314
Query: 271 DLLVRDAPFTGKAENSGEGLSRKDSKRNDSVLKSKYFSTAANHSFDLDLYAGARSQ---- 326
D P + +E +GE S+ + V N S D S+
Sbjct: 315 DSPEGQDPSSESSEEAGEPSQESSSESQEGVTSESRGDNPDNTSQTGDQEDSESSEEDSL 374
Query: 327 TAFPGQIVQGPGFEACGGTNWPDNFVGTKKLGHCDKDEKGMGG------------QDFQL 374
F Q +A +N + + D D G Q+ Q
Sbjct: 375 NTFSSSESQSTEEQADSESNESLSLSEESQESAQDGDSSSQEGLQSQSASTESRSQESQS 434
Query: 375 PLSSQSEKPSEPELKSESFTMRETNGSKLSSSQNLLESPMELNEREV 421
S+SE+ S+ + S S + GS SS +++ ME + R++
Sbjct: 435 EQDSRSEEDSDSQDSSRSKEESNSTGSASSSEEDIRPKNMEADSRKL 481
>TEK3_HUMAN (Q9BXF9) Tektin-3
Length = 490
Score = 34.3 bits (77), Expect = 2.2
Identities = 34/134 (25%), Positives = 62/134 (45%), Gaps = 27/134 (20%)
Query: 648 NILFNSANELSNG-NLPKLTSSQDLPELP-----MQSDVKEVVQECLSAPSVEEPIEKAV 701
N+L +ANE+ N N L+ + + E +Q+ + + +QE E I+KA+
Sbjct: 327 NLLVVTANEMWNQFNKVNLSFTNRIAETADAKNKIQTHLAKTLQEIFQTEMTIESIKKAI 386
Query: 702 VGSK----------DECSREPNFDLCSAIVDFHSTKIVANDGHDVDIKHMQNSISSLQER 751
DE +R PN +LC + + N+ H+VD ++I +LQ+R
Sbjct: 387 KDKTAFLKVAQTRLDERTRRPNIELCRDMAQLR----LVNEVHEVD-----DTIQTLQQR 437
Query: 752 GPSPKD--QSMLYV 763
+D QS++++
Sbjct: 438 LRDAEDTLQSLVHI 451
>T2FA_DROME (Q05913) Transcription initiation factor IIF, alpha
subunit (EC 2.7.1.37) (TFIIF-alpha) (Transcription
factor 5, large chain) (TF5A)
Length = 577
Score = 34.3 bits (77), Expect = 2.2
Identities = 30/95 (31%), Positives = 44/95 (45%), Gaps = 16/95 (16%)
Query: 222 DHKQFEEGNDGDCSGKINDFDEEIVVTTPPDAELLGDSKVDGD-EGKGEED----LLVRD 276
D + FEE +DGD G+ D+D T+ + E ++KVD D +G EED LL D
Sbjct: 289 DDEAFEESDDGDEEGREMDYD-----TSSSEDEPDPEAKVDKDMKGVAEEDALRKLLTSD 343
Query: 277 APFTGKAEN------SGEGLSRKDSKRNDSVLKSK 305
+ ++ +G +K K D V K K
Sbjct: 344 EEEDDEKKSDESDKEDADGEKKKKDKGKDEVSKDK 378
>NXF1_COTJA (P58797) Nuclear RNA export factor 1 (Tip associating
protein) (Tip-associated protein) (mRNA export factor
TAP)
Length = 616
Score = 34.3 bits (77), Expect = 2.2
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 43 VHRNRSGQRRPDSGPRQGGLYSGLG------GSSGNDEKREPPEEDDGDTLL 88
V R SG+R+ GP +G +YS + G +G R+ +EDDGD +
Sbjct: 17 VGRGFSGRRKKGRGPFRGKMYSEMNRNSRNRGGTGPSSSRQRQDEDDGDVAM 68
>LKAA_PASHA (P55117) Leukotoxin from serotype T10
Length = 955
Score = 34.3 bits (77), Expect = 2.2
Identities = 34/112 (30%), Positives = 55/112 (48%), Gaps = 11/112 (9%)
Query: 123 SSARASLDLIDSDCADRKIAGLGFGSPSSEEKSGVHVDDVMIAVNSDCTDRKIADLGFGS 182
S A A+L L D D + K G GF E + V ++ AV+S +++A G S
Sbjct: 243 SGATAALVLADKDASTAKKVGAGF------ELANQVVGNITKAVSSYILAQRVA-AGLSS 295
Query: 183 SAEKGGLCVDDATMKVTVSPDLGISSQARDFDRANTDSSDHKQFEE-GNDGD 233
+ L +T+ V +SP L + A FDRA + + ++F++ G +GD
Sbjct: 296 TGPVAALIA--STVAVAISP-LSFAGIADKFDRAKSLENYAERFKKLGYEGD 344
>KAR3_YEAST (P17119) Kinesin-like protein KAR3 (Nuclear fusion
protein)
Length = 729
Score = 34.3 bits (77), Expect = 2.2
Identities = 45/238 (18%), Positives = 105/238 (43%), Gaps = 21/238 (8%)
Query: 602 PKKDEADMHGKRFELTLSSQPEEASIDGHKIEKGPIHGTVESNA-LGNILFNSANELSNG 660
P++ + H + +S P + +K I+G +SN+ + + + NEL
Sbjct: 49 PQRTDIHRHSLASQSRISMSPNRELLKNYKGTANLIYGNQKSNSGVTSFYKENVNEL--- 105
Query: 661 NLPKLTSSQDLPELPMQSDVKEVVQECLSAPSVE-EPIEKAVVGSKDECSREPNFDLCSA 719
N + + L + D +E ++A +++ E + + + + + + + N +L S
Sbjct: 106 NRTQAILFEKKATLDLLKDELTETKEKINAVNLKFETLREEKIKIEQQLNLKNN-ELISI 164
Query: 720 IVDFHSTKIVANDGHDVDIKHMQNSIS---SLQERGPSPKDQSMLYVNVGV---SNQTLE 773
+F S K N+GH++ +K + S E K + + ++ + +L
Sbjct: 165 KEEFLSKKQFMNEGHEIHLKQLAASNKKELKQMENEYKTKIEKLKFMKIKQFENERASLL 224
Query: 774 HHSSEVKG-FSVNNGEVKQLLN-------MEKRKYVSRYPSEGQSSSQLDT-DMQDLE 822
EV+ ++N ++++LN +EK ++++ Y S+ + +L+ MQ++E
Sbjct: 225 DKIEEVRNKITMNPSTLQEMLNDVEQKHMLEKEEWLTEYQSQWKKDIELNNKHMQEIE 282
>CTCF_CHICK (Q08705) Transcriptional repressor CTCF (CCCTC-binding
factor) (CTCFL paralog) (11-zinc finger protein)
Length = 728
Score = 33.9 bits (76), Expect = 2.9
Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 12/88 (13%)
Query: 771 TLEHHSSEVKGFS----VNNGEVKQLLNMEKRKYVSRYPSEGQSSSQLDTDMQDLEENER 826
T+ H+ G N GE K+ KRK S+ S + D+ D E+ E
Sbjct: 569 TMARHADNCSGLDGGEGENGGETKKGKRGRKRKMRSKKEDSSDSEENAEPDLDDNEDEEE 628
Query: 827 SNGAIRKSDDAVVLNHVGVSNEVPRPPP 854
+ I + VS E P PPP
Sbjct: 629 TAVEIEAEPE--------VSAEAPAPPP 648
>MAP2_MOUSE (P20357) Microtubule-associated protein 2 (MAP 2)
Length = 1828
Score = 33.5 bits (75), Expect = 3.8
Identities = 30/137 (21%), Positives = 64/137 (45%), Gaps = 8/137 (5%)
Query: 411 ESPMELNEREVSGECLSVPSGDDKCFNESKCDPAAD---SDGVKVVGNALHNDDFMQCSI 467
+S +++ ++ S S S D+ + K D AD S+ ++GN + ++ +
Sbjct: 345 QSDDKVSLQDPSALATSKESSKDEEPLKDKADKVADVSISEVTTLLGNV--HSPVVEGYV 402
Query: 468 HKNNLDYAKVTNDSGCTSVQLGVLNDDFILTTPPDAKIYDNSAVNVDRSKSVPQDMKRL- 526
+N KVT D + + + T P K+ + S V+++ + + ++ +L
Sbjct: 403 GENISGEVKVTTDQEKKETSAPSVQEPTLTETEPQTKLDEKSTVSIEEAVAKEEESLKLR 462
Query: 527 --KPMDLRTNTQESFSK 541
K ++T+T++SFSK
Sbjct: 463 DDKTGVIQTSTEQSFSK 479
>PGK1_RHINI (P29405) Phosphoglycerate kinase 1 (EC 2.7.2.3)
Length = 417
Score = 33.1 bits (74), Expect = 4.9
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 14/122 (11%)
Query: 1112 LSLSQLELKEKLEVPAVDF----KKGILKRNPRGCRGLCTCLNCASFRLH--AERAFEYS 1165
LS+ L LK+K + VDF K G + N R + L T + L A S
Sbjct: 7 LSIRDLNLKDKRVLIRVDFNVPMKDGAITNNNRIVQALPT----VKYALDNGASAVILMS 62
Query: 1166 RNQLLDAEEVAQDLLKELS-HLRDMLGRPIDSVNDNPGFDRDQVKEACRKAYAAEQLAKE 1224
+ E VA+ LK ++ + +LG+P++ +ND G D V++AC+ A + + E
Sbjct: 63 HLGRPNGEAVAKYSLKPVAAEVEKLLGKPVEFLNDCVGPD---VEKACQSAKDGKVILLE 119
Query: 1225 RL 1226
L
Sbjct: 120 NL 121
>FAED_ECOLI (P06970) Outer membrane usher protein faeD precursor
Length = 812
Score = 33.1 bits (74), Expect = 4.9
Identities = 23/77 (29%), Positives = 34/77 (43%), Gaps = 5/77 (6%)
Query: 421 VSGECLSVPSGDDKCFNESKCDPAA-----DSDGVKVVGNALHNDDFMQCSIHKNNLDYA 475
VSG L+VP+ D F+ + D A D+ GVKV D + N+ D+
Sbjct: 641 VSGSVLAVPAAKDIMFSRTTGDTVAVVNVKDTPGVKVTSGDGQTDSDGNLVVPLNSYDWN 700
Query: 476 KVTNDSGCTSVQLGVLN 492
VT D+G + + N
Sbjct: 701 TVTIDTGTLPLSTELTN 717
>SP41_YEAST (P38904) SPP41 protein
Length = 1395
Score = 32.7 bits (73), Expect = 6.4
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 377 SSQSEKPSEPELKSESFTMRE--TNGSKLSSSQNLLESPMELNEREVSGECLSVPSGDDK 434
S Q K + SE T+ E TNG + + L+ESP+E +++ GE ++ +D
Sbjct: 1030 SVQEIKENVGTKASEEVTLTEDKTNGDPKNEKRILIESPVEKTDKKKPGEKIATDLNEDA 1089
Query: 435 CFNESKC---DPAADSDGVKVVGN 455
++ K SD ++ GN
Sbjct: 1090 SLSDKKDGDEKSTLHSDAAQLTGN 1113
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.311 0.131 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,258,198
Number of Sequences: 164201
Number of extensions: 7161920
Number of successful extensions: 14626
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 14502
Number of HSP's gapped (non-prelim): 101
length of query: 1262
length of database: 59,974,054
effective HSP length: 122
effective length of query: 1140
effective length of database: 39,941,532
effective search space: 45533346480
effective search space used: 45533346480
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 72 (32.3 bits)
Lotus: description of TM0108.13