BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0106.7.5
(63 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YAC3_SCHPO (Q09817) Hypothetical protein C16C9.03 in chromosome I 34 0.062
NMD3_YEAST (P38861) Nonsense-mediated mRNA decay protein 3 34 0.081
APRF_PSEAE (Q03027) Alkaline protease secretion protein aprF 29 2.0
NDF2_MOUSE (Q62414) Neurogenic differentiation factor 2 (NeuroD2... 29 2.6
DAB_DROME (P98081) Disabled protein 29 2.6
CEC1_CAEEL (P34618) Chromo domain protein cec-1 28 3.4
IHK2_RAT (Q9R0U1) Inositol hexakisphosphate kinase 2 (EC 2.7.4.2... 28 4.5
IHK2_RABIT (Q95221) Inositol hexakisphosphate kinase 2 (EC 2.7.4... 28 4.5
IHK2_MOUSE (Q80V72) Inositol hexakisphosphate kinase 2 (EC 2.7.4... 28 4.5
IHK2_HUMAN (Q9UHH9) Inositol hexakisphosphate kinase 2 (EC 2.7.4... 28 5.8
NDF2_RAT (Q63689) Neurogenic differentiation factor 2 (NeuroD2) ... 27 7.6
VACJ_HAEIN (P44042) VacJ lipoprotein homolog precursor 27 9.9
>YAC3_SCHPO (Q09817) Hypothetical protein C16C9.03 in chromosome I
Length = 498
Score = 34.3 bits (77), Expect = 0.062
Identities = 20/59 (33%), Positives = 34/59 (56%), Gaps = 13/59 (22%)
Query: 2 FLNDLEENPDLRFNLSLYQNIEFQPSEMASVTD---------GEELPSVPLEELLADLE 51
FL +LEE+P+LR ++LY+ P + +V D E++P + ++ELL D+E
Sbjct: 440 FLQNLEEDPELRQGVNLYK----APVKAIAVADTDMDEEDEVDEDIPQISVDELLDDVE 494
>NMD3_YEAST (P38861) Nonsense-mediated mRNA decay protein 3
Length = 518
Score = 33.9 bits (76), Expect = 0.081
Identities = 20/53 (37%), Positives = 33/53 (61%), Gaps = 3/53 (5%)
Query: 2 FLNDLEENPDLRFNLSLYQNIE--FQPSEMASVTD-GEELPSVPLEELLADLE 51
FL +LEE+ +LR +++LY+N E P E D E+ P + ++ELL +L+
Sbjct: 449 FLQELEEDAELRQSVNLYKNREANVPPEEHEMDEDEDEDAPQINIDELLDELD 501
>APRF_PSEAE (Q03027) Alkaline protease secretion protein aprF
Length = 481
Score = 29.3 bits (64), Expect = 2.0
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 13 RFNLSLYQNIEFQPSEMASVTDGEELPSVPLEELLADL-ELGE 54
RFNL+ Q IE + S+ A++ + E L PLE +ADL LGE
Sbjct: 192 RFNLAQAQEIEARDSQDAALRELERLVGAPLE--IADLAPLGE 232
>NDF2_MOUSE (Q62414) Neurogenic differentiation factor 2 (NeuroD2)
(NeuroD-related factor) (NDRF)
Length = 383
Score = 28.9 bits (63), Expect = 2.6
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 31 SVTDGEELPSVPLEELLADLELGEDEDEED 60
S+ GEE+P L E+ + ELG +E+EE+
Sbjct: 59 SLRGGEEIPEPTLAEVKEEGELGGEEEEEE 88
>DAB_DROME (P98081) Disabled protein
Length = 2411
Score = 28.9 bits (63), Expect = 2.6
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 1 QFLNDLEENPDLRFNLSLYQNIEFQPSEMASVTDGEELPSVPLEELLADLELGEDEDEED 60
+F ++ E+ DLR + +QN++ + + D P+ P L +G+D+++ED
Sbjct: 1249 EFSDEFNEDHDLR-QIMDHQNVQTHARDRHGLVDSRGFPTEPSSSALT---VGDDDEDED 1304
>CEC1_CAEEL (P34618) Chromo domain protein cec-1
Length = 304
Score = 28.5 bits (62), Expect = 3.4
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 20 QNIEFQPSEMASVTDGEELPSVPLEELLADLELGEDEDEED 60
+ ++ +P E SV +E S +E+L D ++ EDE EE+
Sbjct: 159 KEVQEEPEEEESVEGEDEEESQEVEDLKEDEKMEEDEKEEE 199
>IHK2_RAT (Q9R0U1) Inositol hexakisphosphate kinase 2 (EC 2.7.4.21)
(InsP6 kinase 2) (Inositol hexakisphosphate kinase 2)
(P(i)-uptake stimulator) (PiUS)
Length = 424
Score = 28.1 bits (61), Expect = 4.5
Identities = 17/55 (30%), Positives = 29/55 (51%), Gaps = 1/55 (1%)
Query: 6 LEENPDLRFNLSLYQNIEFQPSEMASVTDGEELPSVPLEELLADLE-LGEDEDEE 59
L++ +L+ L ++ F S + + DG+E P V L+ DLE L E+ +E
Sbjct: 306 LKKLTELKAVLERQESYRFYSSSLLVIYDGKEWPEVTLDSDAEDLEDLSEESADE 360
>IHK2_RABIT (Q95221) Inositol hexakisphosphate kinase 2 (EC
2.7.4.21) (InsP6 kinase 2) (Inositol hexakisphosphate
kinase 2) (P(i)-uptake stimulator) (PiUS)
Length = 425
Score = 28.1 bits (61), Expect = 4.5
Identities = 17/55 (30%), Positives = 29/55 (51%), Gaps = 1/55 (1%)
Query: 6 LEENPDLRFNLSLYQNIEFQPSEMASVTDGEELPSVPLEELLADLE-LGEDEDEE 59
L++ +L+ L ++ F S + + DG+E P V L+ DLE L E+ +E
Sbjct: 307 LKKLAELKAVLERQESYRFYSSSLLVIYDGKEWPEVALDSDAEDLEDLSEESADE 361
>IHK2_MOUSE (Q80V72) Inositol hexakisphosphate kinase 2 (EC
2.7.4.21) (InsP6 kinase 2) (Inositol hexakisphosphate
kinase 2) (P(i)-uptake stimulator) (PiUS)
Length = 448
Score = 28.1 bits (61), Expect = 4.5
Identities = 17/55 (30%), Positives = 29/55 (51%), Gaps = 1/55 (1%)
Query: 6 LEENPDLRFNLSLYQNIEFQPSEMASVTDGEELPSVPLEELLADLE-LGEDEDEE 59
L++ +L+ L ++ F S + + DG+E P V L+ DLE L E+ +E
Sbjct: 330 LKKLTELKAVLERQESYRFYSSSLLVIYDGKEWPEVTLDSDAEDLEDLSEESADE 384
>IHK2_HUMAN (Q9UHH9) Inositol hexakisphosphate kinase 2 (EC
2.7.4.21) (InsP6 kinase 2) (Inositol hexakisphosphate
kinase 2) (P(i)-uptake stimulator) (PiUS)
Length = 426
Score = 27.7 bits (60), Expect = 5.8
Identities = 17/55 (30%), Positives = 29/55 (51%), Gaps = 1/55 (1%)
Query: 6 LEENPDLRFNLSLYQNIEFQPSEMASVTDGEELPSVPLEELLADLE-LGEDEDEE 59
L++ +L+ L ++ F S + + DG+E P V L+ DLE L E+ +E
Sbjct: 308 LKKLTELKAVLERQESYRFYSSSLLVIYDGKERPEVVLDSDAEDLEDLSEESADE 362
>NDF2_RAT (Q63689) Neurogenic differentiation factor 2 (NeuroD2)
(Brain bHLH protein KW8)
Length = 382
Score = 27.3 bits (59), Expect = 7.6
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 35 GEELPSVPLEELLADLELGEDEDEED 60
GEE+P L E+ + ELG +E+EE+
Sbjct: 62 GEEVPEPTLAEVKEEGELGGEEEEEE 87
>VACJ_HAEIN (P44042) VacJ lipoprotein homolog precursor
Length = 250
Score = 26.9 bits (58), Expect = 9.9
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 8 ENPDLRFNLSLYQNIEFQPSEMASVTDGEELPSVPLEEL 46
++P + F + YQN++F+ ++ V E LP L+E+
Sbjct: 211 QDPYITFREAYYQNLQFKVNDGKLVESKESLPDDILKEI 249
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.310 0.135 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,330,227
Number of Sequences: 164201
Number of extensions: 307713
Number of successful extensions: 845
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 835
Number of HSP's gapped (non-prelim): 14
length of query: 63
length of database: 59,974,054
effective HSP length: 39
effective length of query: 24
effective length of database: 53,570,215
effective search space: 1285685160
effective search space used: 1285685160
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0106.7.5