BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0106.13
         (445 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CV4L_MACFA (Q95LL3) TBC1 domain family protein C6orf197 homolog ...   344  3e-94
CV4L_HUMAN (Q9NU19) TBC1 domain family protein C6orf197               344  3e-94
CV04_HUMAN (Q8WUA7) TBC1 domain family protein C22orf4                322  1e-87
CV04_MACFA (Q95KI1) TBC1 domain family protein C22orf4 homolog (...   321  3e-87
CV04_MOUSE (Q8R5A6) TBC1 domain family protein C22orf4 homolog (...   314  3e-85
GYP1_YEAST (Q08484) GTPase-activating protein GYP1 (GAP for YPT1)     255  1e-67
TB13_MOUSE (Q8R3D1) TBC1 domain family member 13                       80  8e-15
US6L_MOUSE (Q80XC3) USP6 N-terminal like protein                       74  6e-13
US6L_HUMAN (Q92738) USP6 N-terminal like protein (Related to the...    74  6e-13
YQ01_CAEEL (Q09445) Hypothetical protein C04A2.1 in chromosome II      72  2e-12
TBC5_HUMAN (Q92609) TBC1 domain family member 5                        69  3e-11
TB14_HUMAN (Q9P2M4) TBC1 domain family member 14                       66  2e-10
GYP7_YARLI (P09379) GTPase-activating protein GYP7 (GAP for YPT7)      64  6e-10
TBC2_HUMAN (Q9BYX2) TBC1 domain family member 2 (Prostate antige...    63  1e-09
TB14_MOUSE (Q8CGA2) TBC1 domain family member 14                       63  1e-09
GYP7_CANGA (Q6FWI1) GTPase-activating protein GYP7 (GAP for YPT7)      59  2e-08
GYP7_YEAST (P48365) GTPase-activating protein GYP7 (GAP for YPT7)      53  2e-06
GYP2_YEAST (P53258) GTPase-activating protein GYP2 (MAC1-depende...    50  1e-05
TBC4_HUMAN (O60343) TBC1 domain family member 4                        49  3e-05
GYP7_DEBHA (Q6BU76) GTPase-activating protein GYP7 (GAP for YPT7)      48  6e-05

>CV4L_MACFA (Q95LL3) TBC1 domain family protein C6orf197 homolog
           (QtsA-20424)
          Length = 505

 Score =  344 bits (882), Expect = 3e-94
 Identities = 189/445 (42%), Positives = 275/445 (61%), Gaps = 21/445 (4%)

Query: 3   NNDEDNNNNPNIGIFDSRFSQTLRSVQGLLKGRSMPGKILLSQRVDPIDNSNLSSPT--- 59
           +++E++ ++P+    +S+ +  L +   +L+  S         RV P  + + +S     
Sbjct: 74  DDEEEDFSSPSFQTLNSKVA--LATAAQVLENHS-------KLRVKPERSQSTTSDVPAN 124

Query: 60  YTRSNSYNDAGTSDHASET-VEVEVHSSSGIPGENKLKISTSHVENPSEDVRKSSMGARA 118
           Y    S +DA  S ++S+T +   +H    +P    L+     V   S+     +     
Sbjct: 125 YKVIKSSSDAQLSRNSSDTCLRNPLHKQQSLP----LRPIIPLVARISDQNASGAPPMTV 180

Query: 119 TDSARVMKFTKVLSGTVVILDKLRELAWSGVPDYMRPTVWRLLLGYAPPNSDRREGVLRR 178
            +  R+ KF ++LS     LD+LR+ +W GVP  +RP  WRLL GY P N++RR+  L+R
Sbjct: 181 REKTRLEKFRQLLSSHNTDLDELRKCSWPGVPREVRPVTWRLLSGYLPANTERRKLTLQR 240

Query: 179 KRLEYLDCVSQYYDIPDTERSEDEINMLRQIAVDCPRTVPDVSFFQQQQVQKSLERILYA 238
           KR EY   + QYYD  + E  +D     RQI +D PRT P +  FQQ  VQ+  ERIL+ 
Sbjct: 241 KREEYFGFIEQYYDSRNEEHHQDTY---RQIHIDIPRTNPLIPLFQQPLVQEIFERILFI 297

Query: 239 WAIRHPASGYVQGINDLVTPFFVVFLSEYLEGSIDNWSMSDLSSDEISNVEADCYWCLSK 298
           WAIRHPASGYVQGINDLVTPFFVVFLSEY+E  ++N+ +++LS D + ++EAD +WC+SK
Sbjct: 298 WAIRHPASGYVQGINDLVTPFFVVFLSEYVEEDVENFDVTNLSQDMLRSIEADSFWCMSK 357

Query: 299 LLDGMQDHYTFAQPGIQRLVFKLKELVRRIDDPVSTHMENQGLEFLQFAFRWFNCLLIRE 358
           LLDG+QD+YTFAQPGIQ+ V  L+ELV RID+ V  H     +E+LQFAFRW N LL+RE
Sbjct: 358 LLDGIQDNYTFAQPGIQKKVKALEELVSRIDEQVHNHFRRYEVEYLQFAFRWMNNLLMRE 417

Query: 359 IPFNMVTRLWDTYLAEGDALPDFLVYIFASFLLTW-SDKLQKLDFQDLVMFLQHLPTQDW 417
           +P     RLWDTY +E +    F +Y+ A+FL+ W  + L + DFQ L+M LQ+LPT  W
Sbjct: 418 LPLRCTIRLWDTYQSEPEGFSHFHLYVCAAFLIKWRKEILDEEDFQGLLMLLQNLPTIHW 477

Query: 418 THQELEMVLSRAFMWHSMFNNSPNH 442
            ++E+ ++L+ A+    MF ++PNH
Sbjct: 478 GNEEIGLLLAEAYRLKYMFADAPNH 502


>CV4L_HUMAN (Q9NU19) TBC1 domain family protein C6orf197
          Length = 505

 Score =  344 bits (882), Expect = 3e-94
 Identities = 189/445 (42%), Positives = 275/445 (61%), Gaps = 21/445 (4%)

Query: 3   NNDEDNNNNPNIGIFDSRFSQTLRSVQGLLKGRSMPGKILLSQRVDPIDNSNLSSPT--- 59
           +++E++ ++P+    +S+ +  L +   +L+  S         RV P  + + +S     
Sbjct: 74  DDEEEDFSSPSFQTLNSKVA--LATAAQVLENHS-------KLRVKPERSQSTTSDVPAN 124

Query: 60  YTRSNSYNDAGTSDHASET-VEVEVHSSSGIPGENKLKISTSHVENPSEDVRKSSMGARA 118
           Y    S +DA  S ++S+T +   +H    +P    L+     V   S+     +     
Sbjct: 125 YKVIKSSSDAQLSRNSSDTCLRNPLHKQQSLP----LRPIIPLVARISDQNASGAPPMTV 180

Query: 119 TDSARVMKFTKVLSGTVVILDKLRELAWSGVPDYMRPTVWRLLLGYAPPNSDRREGVLRR 178
            +  R+ KF ++LS     LD+LR+ +W GVP  +RP  WRLL GY P N++RR+  L+R
Sbjct: 181 REKTRLEKFRQLLSSQNTDLDELRKCSWPGVPREVRPITWRLLSGYLPANTERRKLTLQR 240

Query: 179 KRLEYLDCVSQYYDIPDTERSEDEINMLRQIAVDCPRTVPDVSFFQQQQVQKSLERILYA 238
           KR EY   + QYYD  + E  +D     RQI +D PRT P +  FQQ  VQ+  ERIL+ 
Sbjct: 241 KREEYFGFIEQYYDSRNEEHHQDTY---RQIHIDIPRTNPLIPLFQQPLVQEIFERILFI 297

Query: 239 WAIRHPASGYVQGINDLVTPFFVVFLSEYLEGSIDNWSMSDLSSDEISNVEADCYWCLSK 298
           WAIRHPASGYVQGINDLVTPFFVVFLSEY+E  ++N+ +++LS D + ++EAD +WC+SK
Sbjct: 298 WAIRHPASGYVQGINDLVTPFFVVFLSEYVEEDVENFDVTNLSQDMLRSIEADSFWCMSK 357

Query: 299 LLDGMQDHYTFAQPGIQRLVFKLKELVRRIDDPVSTHMENQGLEFLQFAFRWFNCLLIRE 358
           LLDG+QD+YTFAQPGIQ+ V  L+ELV RID+ V  H     +E+LQFAFRW N LL+RE
Sbjct: 358 LLDGIQDNYTFAQPGIQKKVKALEELVSRIDEQVHNHFRRYEVEYLQFAFRWMNNLLMRE 417

Query: 359 IPFNMVTRLWDTYLAEGDALPDFLVYIFASFLLTW-SDKLQKLDFQDLVMFLQHLPTQDW 417
           +P     RLWDTY +E +    F +Y+ A+FL+ W  + L + DFQ L+M LQ+LPT  W
Sbjct: 418 LPLRCTIRLWDTYQSEPEGFSHFHLYVCAAFLIKWRKEILDEEDFQGLLMLLQNLPTIHW 477

Query: 418 THQELEMVLSRAFMWHSMFNNSPNH 442
            ++E+ ++L+ A+    MF ++PNH
Sbjct: 478 GNEEIGLLLAEAYRLKYMFADAPNH 502


>CV04_HUMAN (Q8WUA7) TBC1 domain family protein C22orf4
          Length = 517

 Score =  322 bits (825), Expect = 1e-87
 Identities = 159/333 (47%), Positives = 224/333 (66%), Gaps = 6/333 (1%)

Query: 112 SSMGARATDSARVMKFTKVLSGTVVILDKLRELAWSGVPDYMRPTVWRLLLGYAPPNSDR 171
           SS      +++R+ KF ++L+G    L++LR L+WSG+P  +RP  W+LL GY P N DR
Sbjct: 186 SSSALSEREASRLDKFKQLLAGPNTDLEELRRLSWSGIPKPVRPMTWKLLSGYLPANVDR 245

Query: 172 REGVLRRKRLEYLDCVSQYYDIPDTERSEDEINMLRQIAVDCPRTVPDVSFFQQQQVQKS 231
           R   L+RK+ EY   +  YYD  + E  +D     RQI +D PR  P+ +   Q +V + 
Sbjct: 246 RPATLQRKQKEYFAFIEHYYDSRNDEVHQDTY---RQIHIDIPRMSPE-ALILQPKVTEI 301

Query: 232 LERILYAWAIRHPASGYVQGINDLVTPFFVVFLSEYLEGS-IDNWSMSDLSSDEISNVEA 290
            ERIL+ WAIRHPASGYVQGINDLVTPFFVVF+ EY+E   +D   +S + ++ + N+EA
Sbjct: 302 FERILFIWAIRHPASGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLCNIEA 361

Query: 291 DCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDDPVSTHMENQGLEFLQFAFRW 350
           D YWC+SKLLDG+QD+YTFAQPGIQ  V  L+ELV RID+ V  H++   + +LQFAFRW
Sbjct: 362 DTYWCMSKLLDGIQDNYTFAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFRW 421

Query: 351 FNCLLIREIPFNMVTRLWDTYLAEGDALPDFLVYIFASFLLTW-SDKLQKLDFQDLVMFL 409
            N LL+RE+P     RLWDTY +E D    F +Y+ A+FL+ W  + L++ DFQ+L++FL
Sbjct: 422 MNNLLMREVPLRCTIRLWDTYQSEPDGFSHFHLYVCAAFLVRWRKEILEEKDFQELLLFL 481

Query: 410 QHLPTQDWTHQELEMVLSRAFMWHSMFNNSPNH 442
           Q+LPT  W  +++ ++L+ A+     F ++PNH
Sbjct: 482 QNLPTAHWDDEDISLLLAEAYRLKFAFADAPNH 514


>CV04_MACFA (Q95KI1) TBC1 domain family protein C22orf4 homolog
           (QtrA-11492) (Fragment)
          Length = 497

 Score =  321 bits (822), Expect = 3e-87
 Identities = 158/333 (47%), Positives = 225/333 (67%), Gaps = 6/333 (1%)

Query: 112 SSMGARATDSARVMKFTKVLSGTVVILDKLRELAWSGVPDYMRPTVWRLLLGYAPPNSDR 171
           SS      +++R+ KF ++L+G    L++LR+L+WSG+P  +RP  W+LL GY P N DR
Sbjct: 166 SSSALSEREASRLDKFEQLLAGPNTDLEELRKLSWSGIPKPVRPMTWKLLSGYLPANVDR 225

Query: 172 REGVLRRKRLEYLDCVSQYYDIPDTERSEDEINMLRQIAVDCPRTVPDVSFFQQQQVQKS 231
           R   L+RK+ EY   +  YYD  + E  +D     RQI +D PR  P+ +   Q +V + 
Sbjct: 226 RPATLQRKQKEYFAFIEHYYDSRNDEVHQDTY---RQIHIDIPRMSPE-ALILQPKVTEI 281

Query: 232 LERILYAWAIRHPASGYVQGINDLVTPFFVVFLSEYLEGS-IDNWSMSDLSSDEISNVEA 290
            ERIL+ WAIRHPASGYVQGINDLVTPFFVVF+ EY+E   +D   +S + ++ + N+EA
Sbjct: 282 FERILFIWAIRHPASGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLRNIEA 341

Query: 291 DCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDDPVSTHMENQGLEFLQFAFRW 350
           D YWC+SKLLDG+QD+YTFAQPGIQ  V  L+ELV RID+ V  H++   + +LQFAFRW
Sbjct: 342 DTYWCMSKLLDGIQDNYTFAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFRW 401

Query: 351 FNCLLIREIPFNMVTRLWDTYLAEGDALPDFLVYIFASFLLTW-SDKLQKLDFQDLVMFL 409
            N LL+RE+P     RLWDTY +E +    F +Y+ A+FL+ W  + L++ DFQ+L++FL
Sbjct: 402 MNNLLMREVPLRCTIRLWDTYQSEPEGFSHFHLYVCAAFLVRWRKEILEEKDFQELLLFL 461

Query: 410 QHLPTQDWTHQELEMVLSRAFMWHSMFNNSPNH 442
           Q+LPT  W  +++ ++L+ A+     F ++PNH
Sbjct: 462 QNLPTAHWDDEDISLLLAEAYRLKFAFADAPNH 494


>CV04_MOUSE (Q8R5A6) TBC1 domain family protein C22orf4 homolog
           (Fragment)
          Length = 353

 Score =  314 bits (804), Expect = 3e-85
 Identities = 155/325 (47%), Positives = 221/325 (67%), Gaps = 6/325 (1%)

Query: 120 DSARVMKFTKVLSGTVVILDKLRELAWSGVPDYMRPTVWRLLLGYAPPNSDRREGVLRRK 179
           +++R+ KF ++L+G    L++LR+L+WSG+P  +RP  W+LL GY P N DRR   L+RK
Sbjct: 30  ETSRLDKFKQLLAGPNTDLEELRKLSWSGIPKPVRPMTWKLLSGYLPANVDRRPATLQRK 89

Query: 180 RLEYLDCVSQYYDIPDTERSEDEINMLRQIAVDCPRTVPDVSFFQQQQVQKSLERILYAW 239
           + EY   +  YY   + E  +D     RQI +D PR  P+ +   Q +V +  ERIL+ W
Sbjct: 90  QKEYFAFIEHYYSSRNDEVHQDTY---RQIHIDIPRMSPE-ALILQPKVTEIFERILFIW 145

Query: 240 AIRHPASGYVQGINDLVTPFFVVFLSEYLEGS-IDNWSMSDLSSDEISNVEADCYWCLSK 298
           AIRHPASGYVQGINDLVTPFFVVF+ EY +   +D   +S + ++ + N+EAD YWC+SK
Sbjct: 146 AIRHPASGYVQGINDLVTPFFVVFICEYTDREDVDKVDVSSVPAEVLRNIEADTYWCMSK 205

Query: 299 LLDGMQDHYTFAQPGIQRLVFKLKELVRRIDDPVSTHMENQGLEFLQFAFRWFNCLLIRE 358
           LLDG+QD+YTFAQPGIQ  V  L+ELV RID+ V  H++   + +LQFAFRW N LL+RE
Sbjct: 206 LLDGIQDNYTFAQPGIQMKVKMLEELVSRIDERVHRHLDGHEVRYLQFAFRWMNNLLMRE 265

Query: 359 IPFNMVTRLWDTYLAEGDALPDFLVYIFASFLLTW-SDKLQKLDFQDLVMFLQHLPTQDW 417
           +P     RLWDTY +E +    F +Y+ A+FL+ W  + L++ DFQ+L++FLQ+LPT  W
Sbjct: 266 LPLRCTIRLWDTYQSEPEGFSHFHLYVCAAFLVRWRREILEERDFQELLLFLQNLPTARW 325

Query: 418 THQELEMVLSRAFMWHSMFNNSPNH 442
             Q++ ++L+ A+     F ++PNH
Sbjct: 326 DDQDVSLLLAEAYRLKFAFADAPNH 350


>GYP1_YEAST (Q08484) GTPase-activating protein GYP1 (GAP for YPT1)
          Length = 637

 Score =  255 bits (652), Expect = 1e-67
 Identities = 127/258 (49%), Positives = 176/258 (67%), Gaps = 10/258 (3%)

Query: 123 RVMKFTKVLSG-TVVILDKLRELAWSGVPDYMRPTVWRLLLGYAPPNSDRREGVLRRKRL 181
           R+ KF  +L   T++    LR+++W+G+P   RP VW+LL+GY P N+ R+EG L+RKR 
Sbjct: 254 RISKFDNILKDKTIINQQDLRQISWNGIPKIHRPVVWKLLIGYLPVNTKRQEGFLQRKRK 313

Query: 182 EYLDCVSQYYDIPDTERSEDEINMLRQIAVDCPRTVPDVSFFQQQQVQKSLERILYAWAI 241
           EY D +   +    +++   +I    QI +D PRT P +  +Q + VQ SL+RILY WAI
Sbjct: 314 EYRDSLKHTF----SDQHSRDIPTWHQIEIDIPRTNPHIPLYQFKSVQNSLQRILYLWAI 369

Query: 242 RHPASGYVQGINDLVTPFFVVFLSEYLEGS-IDNWSMSDLSS----DEISNVEADCYWCL 296
           RHPASGYVQGINDLVTPFF  FL+EYL  S ID+  + D S+    ++I+++EAD +WCL
Sbjct: 370 RHPASGYVQGINDLVTPFFETFLTEYLPPSQIDDVEIKDPSTYMVDEQITDLEADTFWCL 429

Query: 297 SKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDDPVSTHMENQGLEFLQFAFRWFNCLLI 356
           +KLL+ + D+Y   QPGI R V  L +LV+RID  +  H +N+ +EF+QFAFRW NCLL+
Sbjct: 430 TKLLEQITDNYIHGQPGILRQVKNLSQLVKRIDADLYNHFQNEHVEFIQFAFRWMNCLLM 489

Query: 357 REIPFNMVTRLWDTYLAE 374
           RE     V R+WDTYL+E
Sbjct: 490 REFQMGTVIRMWDTYLSE 507



 Score = 78.6 bits (192), Expect = 3e-14
 Identities = 30/66 (45%), Positives = 52/66 (78%)

Query: 377 ALPDFLVYIFASFLLTWSDKLQKLDFQDLVMFLQHLPTQDWTHQELEMVLSRAFMWHSMF 436
           +L +F V++ A+FL+ WSD+L ++DFQ+ + FLQ+ PT+DWT  ++EM+LS AF+W S++
Sbjct: 570 SLNEFHVFVCAAFLIKWSDQLMEMDFQETITFLQNPPTKDWTETDIEMLLSEAFIWQSLY 629

Query: 437 NNSPNH 442
            ++ +H
Sbjct: 630 KDATSH 635


>TB13_MOUSE (Q8R3D1) TBC1 domain family member 13
          Length = 400

 Score = 80.5 bits (197), Expect = 8e-15
 Identities = 53/189 (28%), Positives = 96/189 (50%), Gaps = 18/189 (9%)

Query: 232 LERILYAWAIRHPASGYVQGINDLVTPFFVVFLSEYLEGSIDNWSMSDLSSDEISNVEAD 291
           +ERIL+ +A  +P   YVQG+N++V P +  F +             D +S+   + EAD
Sbjct: 211 VERILFIYAKLNPGIAYVQGMNEIVGPLYYTFAT-------------DPNSEWKEHAEAD 257

Query: 292 CYWCLSKLLDGMQDHYTFA----QPGIQRLVFKLKELVRRIDDPVSTHMENQGLEFLQFA 347
            ++C + L+  ++D++  +    Q GI   + K+   ++  D  +   ++ Q ++   FA
Sbjct: 258 TFFCFTNLMAEIRDNFIKSLDDSQCGITYKMEKVYSTLKDKDVELYLKLQEQSIKPQFFA 317

Query: 348 FRWFNCLLIREIPFNMVTRLWDTYLAEGDALPDFLVYIFASFLLTWSDKLQKLDFQDLVM 407
           FRW   LL +E     V R+WD+  A+G+   DFL+ +  + L+   ++L + DF   + 
Sbjct: 318 FRWLTLLLSQEFLLPDVIRIWDSLFADGNRF-DFLLLVCCAMLILIREQLLEGDFTVNMR 376

Query: 408 FLQHLPTQD 416
            LQ  P  D
Sbjct: 377 LLQDYPITD 385



 Score = 45.4 bits (106), Expect = 3e-04
 Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 29/133 (21%)

Query: 122 ARVMKFTKVLSGTVVILDKLRELAWSGVP--DYMRPTVWRLLLGYAPPNSDRREGVLRRK 179
           +R+  F  VL    ++L+KLREL++SG+P    +R   W++LL Y P        +L ++
Sbjct: 7   SRIADFQDVLKEPSIVLEKLRELSFSGIPCEGGLRCLCWKILLNYLPLERASWTSILAKQ 66

Query: 180 RLEYLDCVSQ--------------------YYDIPDTERSEDEIN-------MLRQIAVD 212
           R  Y   + +                    + D P     +   N       +L QI  D
Sbjct: 67  RGLYSQFLREMIIQPGIAKANMGVFREDVTFEDHPLNPNPDSRWNTYFKDNEVLLQIDKD 126

Query: 213 CPRTVPDVSFFQQ 225
             R  PD+SFFQ+
Sbjct: 127 VRRLCPDISFFQR 139


>US6L_MOUSE (Q80XC3) USP6 N-terminal like protein
          Length = 819

 Score = 74.3 bits (181), Expect = 6e-13
 Identities = 66/289 (22%), Positives = 120/289 (40%), Gaps = 50/289 (17%)

Query: 139 DKLRELAWSGVPDYMRPTVWRLLLGYAPPNSDRREGVLRRKRLEYLDCVSQYYDIPDTER 198
           +K     + G+P  +R  VW LLL       + R+   + K                  R
Sbjct: 91  EKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKH-----------------R 133

Query: 199 SEDEINMLRQIAVDCPRTVPDVSFFQQQQ--VQKSLERILYAWAIRHPASGYVQGINDLV 256
           +      +RQI +D  RT  D   F+ +    Q+SL  +L A++I +   GY QG++  +
Sbjct: 134 ARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQ-I 192

Query: 257 TPFFVVFLSEYLEGSIDNWSMSDLSSDEISNVEADCYWCLSKLLDGMQD--HYTFAQ--P 312
           T   +++++E                        D +W L KL  G +   H  F Q  P
Sbjct: 193 TALLLMYMNE-----------------------EDAFWALVKLFSGPKHAMHGFFVQGFP 229

Query: 313 GIQRLVFKLKELVRRIDDPVSTHMENQGLEFLQFAFRWFNCLLIREIPFNMVTRLWDTYL 372
            + R     ++++ +    +  H+++Q +    +  +WF    +   PF +  R+WD Y+
Sbjct: 230 KLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFRLNLRIWDIYI 289

Query: 373 AEGDALPDFLVYIFASFLLTWSDKLQKLDFQDLVMFLQHLPTQDWTHQE 421
            EG+ +   + Y   + L      L KL  ++LV FLQ    +D+  ++
Sbjct: 290 FEGERVLTAMSY---TILKLHKKHLMKLSMEELVEFLQETLAKDFFFED 335


>US6L_HUMAN (Q92738) USP6 N-terminal like protein (Related to the N
           terminus of tre) (RN-tre)
          Length = 828

 Score = 74.3 bits (181), Expect = 6e-13
 Identities = 70/307 (22%), Positives = 126/307 (40%), Gaps = 52/307 (16%)

Query: 123 RVMKFTKVLSGTVVI--LDKLRELAWSGVPDYMRPTVWRLLLGYAPPNSDRREGVLRRKR 180
           R  K+ K+L G       +K     + G+P  +R  VW LLL       + R+   + K 
Sbjct: 73  RTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKH 132

Query: 181 LEYLDCVSQYYDIPDTERSEDEINMLRQIAVDCPRTVPDVSFFQQQQ--VQKSLERILYA 238
                            R+      +RQI +D  RT  D   F+ +    Q+SL  +L A
Sbjct: 133 -----------------RARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAA 175

Query: 239 WAIRHPASGYVQGINDLVTPFFVVFLSEYLEGSIDNWSMSDLSSDEISNVEADCYWCLSK 298
           ++I +   GY QG++  +T   +++++E                        D +W L K
Sbjct: 176 YSIYNTEVGYCQGMSQ-ITALLLMYMNE-----------------------EDAFWALVK 211

Query: 299 LLDGMQD--HYTFAQ--PGIQRLVFKLKELVRRIDDPVSTHMENQGLEFLQFAFRWFNCL 354
           L  G +   H  F Q  P + R     ++++ +    +  H+++Q +    +  +WF   
Sbjct: 212 LFSGPKHAMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQC 271

Query: 355 LIREIPFNMVTRLWDTYLAEGDALPDFLVYIFASFLLTWSDKLQKLDFQDLVMFLQHLPT 414
            +   PF +  R+WD Y+ EG+ +   + Y   + L      L KL  ++LV F Q    
Sbjct: 272 FLDRTPFTLNLRIWDIYIFEGERVLTAMSY---TILKLHKKHLMKLSMEELVEFFQETLA 328

Query: 415 QDWTHQE 421
           +D+  ++
Sbjct: 329 KDFFFED 335


>YQ01_CAEEL (Q09445) Hypothetical protein C04A2.1 in chromosome II
          Length = 330

 Score = 72.4 bits (176), Expect = 2e-12
 Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 25/199 (12%)

Query: 178 RKRLEYLDCVSQYYDIPDTERSEDEINMLRQIAVDCPRTVPDVSFFQQQQVQKSLERILY 237
           RK L    C S+   +       DE+  ++QI +D PRT PD  F + +  +K+L R L+
Sbjct: 84  RKELWLRSCPSRADGVWQRHEVPDEV--IKQIKLDLPRTFPDNKFLKTEGTRKTLGRALF 141

Query: 238 AWAIRHPASGYVQGINDLVTPFFVVFLSEYLEGSIDNWSMSDLSSDEISNVEADCYWCLS 297
           A A   P+ GY QG+N +     +V                        N E+     L 
Sbjct: 142 AVAEHIPSVGYCQGLNFVAGVILLVV-----------------------NDESRAIDLLV 178

Query: 298 KLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDDPVSTHMENQGLEFLQFAFRWFNCLLIR 357
            L+   Q++Y     G++R +  L  L+R     V   +E   +       +WF C  + 
Sbjct: 179 HLVSQRQEYYGKNMIGLRRDMHVLHSLLREHCPRVVVTLEKLDVGLDMLVGKWFVCWFVE 238

Query: 358 EIPFNMVTRLWDTYLAEGD 376
            +P   V RLWD  + EGD
Sbjct: 239 SLPMETVLRLWDCLIYEGD 257


>TBC5_HUMAN (Q92609) TBC1 domain family member 5
          Length = 795

 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 35/237 (14%)

Query: 209 IAVDCPRTVPDVSFFQQQQVQKSLERILYAWAIRHPASGYVQGINDLVTPFFVVFLSEYL 268
           I  D  RT P++ FFQQ+ V+K L  +L+ +A  +    Y QG+++L+ P  +VF+    
Sbjct: 163 IEQDVKRTFPEMQFFQQENVRKILTDVLFCYARENEQLLYKQGMHELLAP--IVFVLHCD 220

Query: 269 EGSIDNWSMSDLSSDEISNV------EADCYWCLSKLL------------DGMQDHYT-- 308
             +  + S S   S+E+  V      E D Y   S+L+            DG +   T  
Sbjct: 221 HQAFLHASESAQPSEEMKTVLNPEYLEHDAYAVFSQLMETAEPWFSTFEHDGQKGKETLM 280

Query: 309 ----FAQP-------GIQRLVFKLKE-LVRRIDDPVSTHMENQGLEFLQFAFRWFNCLLI 356
               FA+P        I   V ++++ L+++ D  +  H+    +    +  RW   L  
Sbjct: 281 TPIPFARPQDLGPTIAIVTKVNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRLLFG 340

Query: 357 REIPFNMVTRLWDTYLAEGDALPDFLVYIFASFLLTWSDKLQKLDFQDLVMFLQHLP 413
           RE P   +  +WD   A+G +L   + YIF + LL   D L   ++Q  +  L H P
Sbjct: 341 REFPLQDLLVVWDALFADGLSL-GLVDYIFVAMLLYIRDALISSNYQTCLGLLMHYP 396


>TB14_HUMAN (Q9P2M4) TBC1 domain family member 14
          Length = 678

 Score = 65.9 bits (159), Expect = 2e-10
 Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 35/290 (12%)

Query: 140 KLRELAWSGVPDYMRPTVWRLLLGYAPPNSDRREGVLRRKRLEYLDCVSQYYDIPDTE-- 197
           K+R+L W G+P  +R  VW L +G     +     +   +  E    +S      + E  
Sbjct: 378 KVRDLWWQGIPPSVRGKVWSLAIGNELNITHELFDICLARAKERWRSLSTGGSEVENEDA 437

Query: 198 --RSEDEINMLRQIAVDCPRTVPDVSFFQQ-QQVQKSLERILYAWAIRHPASGYVQGIND 254
              + D    L  I +D  RT P++  FQQ       L  IL A+    P  GYVQG++ 
Sbjct: 438 GFSAADREASLELIKLDISRTFPNLCIFQQGGPYHDMLHSILGAYTCYRPDVGYVQGMS- 496

Query: 255 LVTPFFVVFLSEYLEGSIDNWSMSDLSSDEISNVEADCYWCLSKLLD-GMQDHYTFAQPG 313
                   F++  L  ++D                AD +   S LL+   Q  +     G
Sbjct: 497 --------FIAAVLILNLDT---------------ADAFIAFSNLLNKPCQMAFFRVDHG 533

Query: 314 IQRLVFKLKELVRRIDDP-VSTHMENQGLEFLQFAFRWFNCLLIREIPFNMVTRLWDTYL 372
           +    F   E+    + P +  H +   L    +   W   L  + +P ++  R+WD + 
Sbjct: 534 LMLTYFAAFEVFFEENLPKLFAHFKKNNLTPDIYLIDWIFTLYSKSLPLDLACRIWDVFC 593

Query: 373 AEGDALPDFLVYIFASFLLTWSDKLQKLDFQDLVMFLQHLPTQDWTHQEL 422
            +G+   +FL       L  + D L K+DF  +  FL  LP +D   +EL
Sbjct: 594 RDGE---EFLFRTALGILKLFEDILTKMDFIHMAQFLTRLP-EDLPAEEL 639


>GYP7_YARLI (P09379) GTPase-activating protein GYP7 (GAP for YPT7)
          Length = 730

 Score = 64.3 bits (155), Expect = 6e-10
 Identities = 59/263 (22%), Positives = 111/263 (41%), Gaps = 51/263 (19%)

Query: 135 VVILDKLRELAW-SGVPDYMRPTVWRLLLGYAPPNSD--RREGVLRRKRLEYLDCVSQYY 191
           +V +++++E  +  G+   +RP  W  LLG  P +S    R+ ++ + R++Y     +++
Sbjct: 374 IVTVNEVKERIFHGGLAPAVRPEGWLFLLGVYPWDSTAAERKELVSKLRVDYNRLKKEWW 433

Query: 192 DIPDTERSEDEINMLRQIAVDCPRTVPDVSFFQQQQVQKS-------------------- 231
              D ER +   + L +I  D  RT  +++FF +   +K                     
Sbjct: 434 VQEDKERDDFWRDQLSRIEKDVHRTDRNITFFAECDAKKDGDDDNYDKDEFGFSSQINSN 493

Query: 232 -----LERILYAWAIRHPASGYVQGINDLVTPFFVVFLSEYLEGSIDNWSMSDLSSDEIS 286
                L  +L  +   +   GYVQG++DL++P +VV   + L                  
Sbjct: 494 IHLIQLRDMLITYNQHNKNLGYVQGMSDLLSPLYVVLQDDTL------------------ 535

Query: 287 NVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDDPVSTHMENQGLEFLQF 346
                 +W  S  ++ M+ +Y   Q G++  +  L  LV+ +   +  H+E      L F
Sbjct: 536 -----AFWAFSAFMERMERNYLRDQSGMRNQLLCLDHLVQFMLPSLYKHLEKTESTNLFF 590

Query: 347 AFRWFNCLLIREIPFNMVTRLWD 369
            FR       RE+ ++ V RLW+
Sbjct: 591 FFRMLLVWFKRELLWDDVLRLWE 613


>TBC2_HUMAN (Q9BYX2) TBC1 domain family member 2 (Prostate antigen
           recognized and indentified by SEREX) (PARIS-1)
          Length = 917

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 71/325 (21%), Positives = 126/325 (37%), Gaps = 58/325 (17%)

Query: 114 MGARATDSARVMKFTKVLSGTVVILDKLRELAWSGVPDYMRPTVWRLLLGYAPPNSDRRE 173
           +G  A D  R ++      G +V   +L++L  +GVP   RP VWR L+           
Sbjct: 593 LGLEAVD--RPLRERWAALGDLVPSAELKQLLRAGVPREHRPRVWRWLV----------- 639

Query: 174 GVLRRKRLEYLDCVSQYYDIPDTERSEDEINMLRQIAVDCPRTVPDVSFFQ--QQQVQKS 231
                 R+++L     Y ++    ++ +     RQI +D  RT P+   F          
Sbjct: 640 ----HLRVQHLHTPGCYQELLSRGQAREH-PAARQIELDLNRTFPNNKHFTCPTSSFPDK 694

Query: 232 LERILYAWAIRHPASGYVQGINDLVTPFFVVFLSEYLEGSIDNWSMSDLSSDEISNVEAD 291
           L R+L A++ ++P  GY QG+N L     +V                          E  
Sbjct: 695 LRRVLLAFSWQNPTIGYCQGLNRLAAIALLVL-----------------------EEEES 731

Query: 292 CYWCLSKLLDGMQ--DHYTFAQPGIQRLVFKLKELVRRIDDPVSTHMENQGLEFLQFAFR 349
            +WCL  +++ +   D+Y       Q     L++L+      +  H+    ++     F 
Sbjct: 732 AFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHHVDLSLVTFN 791

Query: 350 WFNCLLIREIPFNMVTRLWDTYLAEG------------DALPDFLVYIFASFLLTWSDKL 397
           WF  +    +  N++ R+WD +L EG            + L  +    F +  ++ S KL
Sbjct: 792 WFLVVFADSLISNILLRVWDAFLYEGTKYNEKEILRLQNGLEIYQYLRFFTKTISNSRKL 851

Query: 398 QKLDFQDLVMF-LQHLPTQDWTHQE 421
             + F D+  F ++ L      H+E
Sbjct: 852 MNIAFNDMNPFRMKQLRQLRMVHRE 876


>TB14_MOUSE (Q8CGA2) TBC1 domain family member 14
          Length = 679

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 67/281 (23%), Positives = 109/281 (37%), Gaps = 34/281 (12%)

Query: 140 KLRELAWSGVPDYMRPTVWRLLLGYAPPNSDRREGVLRRKRLEYLDCVSQYYDIPDTE-- 197
           K+R+L W G+P  +R  VW L +G     +     +   +  E    +S      + E  
Sbjct: 379 KVRDLWWQGIPPSVRGKVWSLAIGNELNITHELFDICLARAKERWRSLSTGGSEVENEDA 438

Query: 198 --RSEDEINMLRQIAVDCPRTVPDVSFFQQ-QQVQKSLERILYAWAIRHPASGYVQGIND 254
              + D    L  I +D  RT P++  FQQ       L  IL A+    P  GYVQG++ 
Sbjct: 439 GFSAADREASLELIKLDISRTFPNLCIFQQGGPYHDMLHSILGAYTCYRPDVGYVQGMS- 497

Query: 255 LVTPFFVVFLSEYLEGSIDNWSMSDLSSDEISNVEADCYWCLSKLLD-GMQDHYTFAQPG 313
                   F++  L  ++D                AD +   S LL+   Q  +     G
Sbjct: 498 --------FIAAVLILNLDT---------------ADAFIAFSNLLNKPCQMAFFRVDHG 534

Query: 314 IQRLVFKLKELVRRIDDP-VSTHMENQGLEFLQFAFRWFNCLLIREIPFNMVTRLWDTYL 372
           +    F   E+    + P +  H +   L    +   W   L  + +P ++  R+WD + 
Sbjct: 535 LMLTYFAAFEVFFEENLPKLFAHFKKNNLTADIYLIDWIFTLYSKSLPLDLACRIWDVFC 594

Query: 373 AEGDALPDFLVYIFASFLLTWSDKLQKLDFQDLVMFLQHLP 413
            +G+   +FL       L  + D L ++DF     FL  LP
Sbjct: 595 RDGE---EFLFRTALGILKLFEDILTRMDFIHSAQFLTRLP 632


>GYP7_CANGA (Q6FWI1) GTPase-activating protein GYP7 (GAP for YPT7)
          Length = 745

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 56/269 (20%), Positives = 104/269 (37%), Gaps = 53/269 (19%)

Query: 136 VILDKLRELAWSG--VPDYMRPTVWRLLLGYAPPNSDRREGVLRRKRL--EYLDCVSQYY 191
           V ++++++  + G    D  R  VW  LLG  P +S   E    RK L  EY++   ++ 
Sbjct: 377 VTVNEVKDYIFHGGLADDATRKEVWPFLLGVYPWDSSEDERKQLRKALHDEYMELKQKWV 436

Query: 192 DIP---DTERSEDEINMLRQIAVDCPRTVPDVSFFQQQQVQ------------------- 229
           D     D +  E   + L +I  D  R   ++  ++                        
Sbjct: 437 DREVNLDNDEEEYWKDQLFRIEKDVKRNDRNIDIYKYNTSDNLPFPEDTAPTTDDDDSIK 496

Query: 230 ----KSLERILYAWAIRHPASGYVQGINDLVTPFFVVFLSEYLEGSIDNWSMSDLSSDEI 285
               K L  IL  + I +P  GYVQG+ DL++P + +   E                   
Sbjct: 497 NPNLKKLADILTTYNIFNPNLGYVQGMTDLLSPLYYIIRDE------------------- 537

Query: 286 SNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDDPVSTHMENQGLEFLQ 345
                  +WC +  ++ M+ ++   Q GI+  +  L +L + +   +S H++      L 
Sbjct: 538 ----ETTFWCFTNFMERMERNFLRDQSGIRDQMLALTDLCQLMLPRLSAHLQKCDSSDLF 593

Query: 346 FAFRWFNCLLIREIPFNMVTRLWDTYLAE 374
           F FR       RE  ++ +  +W+ +  +
Sbjct: 594 FCFRMLLVWFKREFNYDDIFNIWEVFFTD 622


>GYP7_YEAST (P48365) GTPase-activating protein GYP7 (GAP for YPT7)
          Length = 746

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 33/140 (23%), Positives = 58/140 (40%), Gaps = 23/140 (16%)

Query: 232 LERILYAWAIRHPASGYVQGINDLVTPFFVVFLSEYLEGSIDNWSMSDLSSDEISNVEAD 291
           L+ IL  + + +   GYVQG+ DL++P +V+   E+                        
Sbjct: 513 LQNILITYNVYNTNLGYVQGMTDLLSPIYVIMKEEW-----------------------K 549

Query: 292 CYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDDPVSTHMENQGLEFLQFAFRWF 351
            +WC +  +D M+ ++   Q GI   +  L ELV+ +   +S H+       L F FR  
Sbjct: 550 TFWCFTHFMDIMERNFLRDQSGIHEQMLTLVELVQLMLPELSEHLNKCDSGNLFFCFRML 609

Query: 352 NCLLIREIPFNMVTRLWDTY 371
                RE     +  +W+ +
Sbjct: 610 LVWFKREFEMEDIMHIWENF 629


>GYP2_YEAST (P53258) GTPase-activating protein GYP2 (MAC1-dependent
           regulator) (MIC1 protein)
          Length = 950

 Score = 50.1 bits (118), Expect = 1e-05
 Identities = 57/249 (22%), Positives = 97/249 (38%), Gaps = 55/249 (22%)

Query: 135 VVILDKLRELAWSGVPDYMRPTVWRLLLG-----YAPPNSDRREGVLRRKRLEYLDCVSQ 189
           VV     R+L   GVP+ MR  +W L  G     YA  NS   E +L             
Sbjct: 231 VVQTPMFRKLIRIGVPNRMRGEIWELCSGAMYMRYA--NSGEYERILNE----------- 277

Query: 190 YYDIPDTERSEDEINMLRQIAVDCPRTVPDVSFFQQQQVQKSLERILYAWAIRHPASGYV 249
             +   T ++ DEI        D  R++P+ S +Q ++  + L  +L A++ ++P  GY 
Sbjct: 278 --NAGKTSQAIDEIEK------DLKRSLPEYSAYQTEEGIQRLRNVLTAYSWKNPDVGYC 329

Query: 250 QGINDLVTPFFVVFLSEYLEGSIDNWSMSDLSSDEISNVEADCYWCLSKLLD-GMQDHYT 308
           Q +N +V   F++F+S                       E   +WCL  L D  +  +Y+
Sbjct: 330 QAMN-IVVAGFLIFMS-----------------------EEQAFWCLCNLCDIYVPGYYS 365

Query: 309 FAQPG--IQRLVFKLKELVRRIDDPVSTHMENQGLEFLQFAFRWFNCLLIREIPFNMVTR 366
               G  + + VF  +  V      +  ++    ++    +  WF  L    +P     R
Sbjct: 366 KTMYGTLLDQRVF--ESFVEDRMPVLWEYILQHDIQLSVVSLPWFLSLFFTSMPLEYAVR 423

Query: 367 LWDTYLAEG 375
           + D +   G
Sbjct: 424 IMDIFFMNG 432


>TBC4_HUMAN (O60343) TBC1 domain family member 4
          Length = 1299

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 66/298 (22%), Positives = 115/298 (38%), Gaps = 46/298 (15%)

Query: 138  LDKLRELAWSGVPDYMRPTVWRLLLGYAPPNSDRREGVLRRKRLEYLDCVSQYYDIPDTE 197
            ++ +  L   GVP   R  +W+ L              L+ +    L    Q  DI   E
Sbjct: 909  MEDIHTLLKEGVPKSRRGEIWQFL-------------ALQYRLRHRLPNKQQPPDISYKE 955

Query: 198  RSEDEINMLRQIAVDCPRTVPDVSFFQQQ--QVQKSLERILYAWAIRHPASGYVQGINDL 255
              +        I VD  RT P   +F  Q    Q SL  +L A+++     GY QGI+  
Sbjct: 956  LLKQLTAQQHAILVDLGRTFPTHPYFSVQLGPGQLSLFNLLKAYSLLDKEVGYCQGIS-F 1014

Query: 256  VTPFFVVFLSEYLEGSIDNWSMSDLSSDEISNVEADCYWCLSKLLDGMQDHYTFAQPGIQ 315
            V    ++ +SE     +  + M DL                     G +  Y      +Q
Sbjct: 1015 VAGVLLLHMSEEQAFEMLKFLMYDL---------------------GFRKQYRPDMMSLQ 1053

Query: 316  RLVFKLKELVRRIDDPVSTHMENQGLEFLQFAFRWFNCLLIREIPFNMVTRLWDTYLAEG 375
              +++L  L+      +  H+E   +    +A  WF  L   +     V R++D    +G
Sbjct: 1054 IQMYQLSRLLHDYHRDLYNHLEENEISPSLYAAPWFLTLFASQFSLGFVARVFDIIFLQG 1113

Query: 376  DALPDFLVYIFASFLLTWSDKL--QKLDFQDLVMFLQH-LPTQDWTHQELEMVLSRAF 430
                  +++  A  LL+  + L  +   F+++V FL++ LP  D    E+E ++++ F
Sbjct: 1114 TE----VIFKVALSLLSSQETLIMECESFENIVEFLKNTLP--DMNTSEMEKIITQVF 1165


>GYP7_DEBHA (Q6BU76) GTPase-activating protein GYP7 (GAP for YPT7)
          Length = 757

 Score = 47.8 bits (112), Expect = 6e-05
 Identities = 34/138 (24%), Positives = 56/138 (39%), Gaps = 23/138 (16%)

Query: 232 LERILYAWAIRHPASGYVQGINDLVTPFFVVFLSEYLEGSIDNWSMSDLSSDEISNVEAD 291
           +  IL  +   +   GYVQG+ DL++P +V F  E L                       
Sbjct: 520 MREILLTYNEHNVNLGYVQGMTDLLSPLYVTFQDESLT---------------------- 557

Query: 292 CYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDDPVSTHMENQGLEFLQFAFRWF 351
            +W     +D M+ ++   Q G++  +  L ELV+ +   +  H+E      L F FR  
Sbjct: 558 -FWAFVNFMDRMERNFLRDQSGMKNQMLTLNELVQFMLPDLFKHLEKCESTDLYFFFRML 616

Query: 352 NCLLIREIPFNMVTRLWD 369
                RE  ++ V  LW+
Sbjct: 617 LVWFKREFEWSSVLSLWE 634


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.320    0.135    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,317,898
Number of Sequences: 164201
Number of extensions: 2207495
Number of successful extensions: 5925
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 5811
Number of HSP's gapped (non-prelim): 74
length of query: 445
length of database: 59,974,054
effective HSP length: 113
effective length of query: 332
effective length of database: 41,419,341
effective search space: 13751221212
effective search space used: 13751221212
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)