BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0105.6
(574 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PRR5_ARATH (Q6LA42) Two-component response regulator-like APRR5 ... 278 2e-74
PRR9_ARATH (Q8L500) Two-component response regulator-like APRR9 ... 211 4e-54
PRR7_ARATH (Q93WK5) Two-component response regulator-like APRR7 ... 192 2e-48
PRR3_ARATH (Q9LVG4) Two-component response regulator-like APRR3 ... 189 1e-47
PRR1_ARATH (Q9LKL2) Two-component response regulator-like APRR1 ... 128 4e-29
ARRC_ARATH (P62598) Two-component response regulator ARR12 97 1e-19
ARRA_ARATH (O49397) Two-component response regulator ARR10 (Rece... 97 1e-19
ARR1_ARATH (Q940D0) Two-component response regulator ARR1 96 3e-19
ARR2_ARATH (Q9ZWJ9) Two-component response regulator ARR2 (Recei... 89 2e-17
ARRB_ARATH (Q9FXD6) Two-component response regulator ARR11 (Rece... 87 9e-17
REGA_DICDI (Q23917) 3',5'-cyclic-nucleotide phosphodiesterase re... 87 1e-16
ARRI_ARATH (Q9FGT7) Two-component response regulator ARR18 86 3e-16
ARRE_ARATH (Q8L9Y3) Two-component response regulator ARR14 85 4e-16
ARR7_ARATH (Q9ZWS7) Two-component response regulator ARR7 79 4e-14
ARRJ_ARATH (Q9M9B9) Putative two-component response regulator ARR19 77 1e-13
ARR3_ARATH (Q9ZWS9) Two-component response regulator ARR3 76 2e-13
PRR4_ARATH (Q9FJ16) Putative two-component response regulator-li... 75 4e-13
ARRK_ARATH (Q9LZJ8) Putative two-component response regulator ARR20 74 1e-12
ARR4_ARATH (O82798) Two-component response regulator ARR4 (Respo... 74 1e-12
ARRF_ARATH (Q7G8V2) Two-component response regulator ARR15 73 2e-12
>PRR5_ARATH (Q6LA42) Two-component response regulator-like APRR5
(Pseudo-response regulator 5)
Length = 558
Score = 278 bits (712), Expect = 2e-74
Identities = 210/564 (37%), Positives = 287/564 (50%), Gaps = 96/564 (17%)
Query: 11 ERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILT 70
ER LP+ ALR+LLVEADDSTRQIIAALLRKCSY+VAAV DGLKAWE LK K +DLILT
Sbjct: 42 ERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILT 101
Query: 71 EVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNEL 130
EVDLPSISG++LLTLI +HD CK+IPVIMMS+ DSV+ V+KCMLKGAAD+L+KP+RRNEL
Sbjct: 102 EVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNEL 161
Query: 131 RNLWQHVWRRQTITKPPQKLTLAHNNKLDAAIENKPASNDSTGSVASTQKNNETSEAQST 190
RNLWQHVWRRQT P + N + ++N+S G + +AQS+
Sbjct: 162 RNLWQHVWRRQTSLAPD---SFPWNESVGQQKAEGASANNSNGKRDDHVVSGNGGDAQSS 218
Query: 191 CTSPILGAESGSMENMQDATQLKSSSNLSDIDAVKQDKSTQLEMESPKHNSEAGELSKGN 250
CT P + ES +E +S DAV Q+E + N
Sbjct: 219 CTRPEMEGESADVE-------------VSARDAV------QMECAKSQFN---------- 249
Query: 251 PHISTEIRGCSDELLEPSSGAMDLI-AAFGNLPKRTIGNHSFHDGSTAKFEFDTQLELST 309
E R ++EL + A+D + A+F +R + S A++E +L+LS
Sbjct: 250 -----ETRLLANELQSKQAEAIDFMGASFRRTGRRN------REESVAQYESRIELDLSL 298
Query: 310 R----GDFPASEERLMLNHTNASAFSQY---------SSSKLFSENSPHESHELCENTNI 356
R + +S +R L+ ++ASAF++Y S+S + ++ + + +N +
Sbjct: 299 RRPNASENQSSGDRPSLHPSSASAFTRYVHRPLQTQCSASPVVTDQRKNVAASQDDNIVL 358
Query: 357 SHRYGGKNQNHNPENTNSMVIGQSGQVKTKFPNSQLGFFPA-----TGVSFDNVSTGDGD 411
++Y N N ++QL +P T +N+ D
Sbjct: 359 MNQYNTSEPPPNAPRRNDTSFYTGADSPGPPFSNQLNSWPGQSSYPTPTPINNIQFRD-- 416
Query: 412 VFPSMLYTQ-LTPKSVCQKESSPFPTSTSSQSNNESMKSEHHHWSDDATFTSDKCENDQS 470
P+ YT + P S+ SP P+S S H +S + K E Q
Sbjct: 417 --PNTAYTSAMAPASL-----SPSPSSVSP-----------HEYSSMFHPFNSKPEGLQD 458
Query: 471 NLDCAVNDSSATRQSSSTSFYHDSANHSSSGVNGSGGSGSDGNVTSTGVDDELRGTDSHR 530
DC++ D R SS + + NH + DG S G +
Sbjct: 459 R-DCSM-DVDERRYVSSATEHSAIGNHIDQLIEKKN---EDGYSLSVG--------KIQQ 505
Query: 531 TSQREAALTKFRLKRKDRCYDKKV 554
+ QREAALTKFR+KRKDRCY+KKV
Sbjct: 506 SLQREAALTKFRMKRKDRCYEKKV 529
>PRR9_ARATH (Q8L500) Two-component response regulator-like APRR9
(Pseudo-response regulator 9)
Length = 468
Score = 211 bits (537), Expect = 4e-54
Identities = 143/386 (37%), Positives = 188/386 (48%), Gaps = 74/386 (19%)
Query: 11 ERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILT 70
E+ LP+T LR+LLVE+D STRQII ALLRKC YKV AV DGL AWE LK K+H+IDLILT
Sbjct: 29 EKYLPKTVLRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILT 88
Query: 71 EVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNEL 130
E+DLPSISGF+LL L+ +H+ CK+IPVIMMSS DS+ MV KCML+GAAD+LIKP+R+NEL
Sbjct: 89 ELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNEL 148
Query: 131 RNLWQHVWRRQTITKPPQKLTLAHNNKLDAAIENKPASNDSTGSVASTQKNNETSEAQST 190
+NLWQHVWRR T+ P AH L A+ N + T
Sbjct: 149 KNLWQHVWRRLTLRDDP----TAHAQSLPASQHN-------------------LEDTDET 185
Query: 191 CTSPILGAESGSMENMQDATQLKSSSNLSDIDAVKQDKSTQLEMESPKHNSEAGELSKGN 250
C ++ G S A+ + +L ME+ K E
Sbjct: 186 CEDSRYHSDQG-----------------SGAQAINYNGHNKL-MENGKSVDE-------- 219
Query: 251 PHISTEIRGCSDELLEPSSGAMDLIAAFGNLPKRTIGNHSFHDGSTAKFEFDTQLELSTR 310
DE E MDLI P + S + + + S
Sbjct: 220 ----------RDEFKETFDVTMDLIGGIDKRPDSIYKDKSRDECVGPELGLSLKRSCSVS 269
Query: 311 GDFPASEERLMLNHTNASAFSQYSSSKLFSE-------------NSPHESHELCENTNIS 357
+ + L+ ++ASAFS++ SK + +P ESHE + ++
Sbjct: 270 FENQDESKHQKLSLSDASAFSRFEESKSAEKAVVALEESTSGEPKTPTESHE--KLRKVT 327
Query: 358 HRYGGKNQNHNPENTNSMVIGQSGQV 383
G + N EN S + QV
Sbjct: 328 SDQGSATTSSNQENIGSSSVSFRNQV 353
Score = 53.5 bits (127), Expect = 1e-06
Identities = 54/192 (28%), Positives = 80/192 (41%), Gaps = 35/192 (18%)
Query: 388 PNSQLGFFPATGVSFDN--------VSTGDGDVFPSMLYTQLTPKSVCQKESSPFPTSTS 439
P L + VSF+N +S D F ++ K+V E S TS
Sbjct: 256 PELGLSLKRSCSVSFENQDESKHQKLSLSDASAFSRFEESKSAEKAVVALEES---TSGE 312
Query: 440 SQSNNESMKSEHHHWSDDATFTSDKCENDQSNLDCA-------VNDSSATRQSSSTSFYH 492
++ ES + SD + T+ ++Q N+ + V S+ T Q +
Sbjct: 313 PKTPTESHEKLRKVTSDQGSATTS---SNQENIGSSSVSFRNQVLQSTVTNQKQDSPIPV 369
Query: 493 DSANHSSSGVNGSGGSGSDGNVTSTGVDDELRGTDSHRT----------SQREAALTKFR 542
+S ++ GS S T+ G+ + T+ + SQREAAL KFR
Sbjct: 370 ESNREKAASKEVEAGSQS----TNEGIAGQSSSTEKPKEEESAKQRWSRSQREAALMKFR 425
Query: 543 LKRKDRCYDKKV 554
LKRKDRC+DKKV
Sbjct: 426 LKRKDRCFDKKV 437
>PRR7_ARATH (Q93WK5) Two-component response regulator-like APRR7
(Pseudo-response regulator 7)
Length = 727
Score = 192 bits (488), Expect = 2e-48
Identities = 175/630 (27%), Positives = 275/630 (42%), Gaps = 96/630 (15%)
Query: 11 ERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILT 70
ER L +R+LLVE DD TR I+ ALLR CSY+V +G++AW+ L++ + ID++LT
Sbjct: 70 ERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLT 129
Query: 71 EVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNEL 130
EV +P +SG LL I +H ++IPVIMMSS+DS+ +VFKC+ KGA DFL+KP+R+NEL
Sbjct: 130 EVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNEL 189
Query: 131 RNLWQHVWRRQTITKPPQKLTLAHNNKLDAAIENKPASNDSTGSVASTQKNNETSEAQST 190
+ LWQHVWRR + + H + ++ S+ +GS + +N S
Sbjct: 190 KILWQHVWRRCQSSSGSGSESGTHQTQKSVKSKSIKKSDQDSGS-SDENENGSIGLNASD 248
Query: 191 CTSPILGAESGSMENMQDATQLKSSSNLSD---------IDAVKQDKSTQL-----EMES 236
+S GA+S + D + +L D + + + S QL E E+
Sbjct: 249 GSSDGSGAQSSWTKKAVDVDDSPRAVSLWDRVDSTCAQVVHSNPEFPSNQLVAPPAEKET 308
Query: 237 PKHNSEAGELSKGNPHISTEIRGC------SDELLEPSSGAMDLIAAF---GNLPKRTIG 287
+H+ + +++ G + R C DE L ++G M +F + K +G
Sbjct: 309 QEHDDKFEDVTMGRDLEISIRRNCDLALEPKDEPLSKTTGIMRQDNSFEKSSSKWKMKVG 368
Query: 288 NHSFHDGSTAKFEFDTQLELSTRGDFPASEERLMLN------HTNASAFSQYSSSKLFSE 341
S + Q+ F A L N +T+ +S SE
Sbjct: 369 KGPLDLSSES--PSSKQMHEDGGSSFKAMSSHLQDNREPEAPNTHLKTLDTNEASVKISE 426
Query: 342 NSPHESHE-------------LCENTNISHR-YGGKNQNHNP-ENTNSMVIGQSGQVKTK 386
H H + ++ N+ R G +NP N N + G G +
Sbjct: 427 ELMHVEHSSKRHRGTKDDGTLVRDDRNVLRRSEGSAFSRYNPASNANKISGGNLGSTSLQ 486
Query: 387 FPNSQLGFFPATGVSFD---------------NVSTGDGDVFPSMLYTQLTPKSVCQKES 431
NSQ T ++D +V + + D+ + T + K
Sbjct: 487 DNNSQ-DLIKKTEAAYDCHSNMNESLPHNHRSHVGSNNFDM------SSTTENNAFTKPG 539
Query: 432 SPFPTSTSSQSNNES----MKSEHH--HWSDDATFTSDK----------------CENDQ 469
+P +S S S S + +HH H S + +++ E +
Sbjct: 540 APKVSSAGSSSVKHSSFQPLPCDHHNNHASYNLVHVAERKKLPPQCGSSNVYNETIEGNN 599
Query: 470 SNLDCAVNDSSATRQSSSTSFYHDSANHSSSGVN--GSGGSGSDGNVTSTGVDDELRG-- 525
+ ++ +VN S + S Y S ++ G+N G+G +GN +G
Sbjct: 600 NTVNYSVNGSVSGSGHGSNGPYGSSNGMNAGGMNMGSDNGAGKNGNGDGSGSGSGSGSGN 659
Query: 526 -TDSHRTSQREAALTKFRLKRKDRCYDKKV 554
D ++ SQREAALTKFR KRK+RC+ KKV
Sbjct: 660 LADENKISQREAALTKFRQKRKERCFRKKV 689
>PRR3_ARATH (Q9LVG4) Two-component response regulator-like APRR3
(Pseudo-response regulator 3)
Length = 495
Score = 189 bits (481), Expect = 1e-47
Identities = 133/385 (34%), Positives = 197/385 (50%), Gaps = 38/385 (9%)
Query: 11 ERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILT 70
ER LP +L++LLVE DDSTR I+ ALL+ CSY+V AV D L+AW L+++ IDL+LT
Sbjct: 56 ERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLT 115
Query: 71 EVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNEL 130
EVD+P SG LL+ I H K+IPVIMMSS+DS+ +VFKC+ GA DFL+KP+R+NEL
Sbjct: 116 EVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNEL 175
Query: 131 RNLWQHVWRRQTITKPPQKLTLAHNNKL-----------DAAI--ENKPASNDSTGSVAS 177
+NLWQHVWRR + + H+ K DA+I E++ S S G
Sbjct: 176 KNLWQHVWRRCHSSSGSGSESGIHDKKSVKPESTQGSENDASISDEHRNESGSSGGLSNQ 235
Query: 178 TQKNNETSEAQSTCTSPILGAESGSMEN-MQDATQLKSS--------SNLSDIDAVKQDK 228
++ S QS+ T +S S N DA K + + L + + K+
Sbjct: 236 DGGSDNGSGTQSSWTKRASDTKSTSPSNQFPDAPNKKGTYENGCAHVNRLKEAEDQKEQI 295
Query: 229 ST--QLEMESPKHNSEAGELSKGNPHISTEIRGCSDELLEPSSGAMDLIAAFGNLPKRTI 286
T Q M K E G+L K + + +D+ L SSG + + P
Sbjct: 296 GTGSQTGMSMSKKAEEPGDLEKNAKYSVQALERNNDDTLNRSSGNSQVES---KAPSSNR 352
Query: 287 GNHSFHDGSTAKFEFDTQLELSTRGDFPASEERLMLNHTNASAFSQYSSSKLFSENSPHE 346
+ + + K D ++ +R +L H+N SAFS+Y++ ++ +P E
Sbjct: 353 EDLQSLEQTLKKTREDRDYKVG---------DRSVLRHSNLSAFSKYNNGATSAKKAPEE 403
Query: 347 SHELC--ENTNISHRYGGKNQNHNP 369
+ E C ++ I+ G + + NP
Sbjct: 404 NVESCSPHDSPIAKLLGSSSSSDNP 428
Score = 55.1 bits (131), Expect = 5e-07
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 391 QLGFFPATGVSFDNVSTGDGDVFPSMLYTQLTPKSVCQKESSPFPTSTSSQSNNESMKSE 450
Q+G TG+S + GD+ + Y SV E + T S N++
Sbjct: 294 QIGTGSQTGMSMSKKAEEPGDLEKNAKY------SVQALERNNDDTLNRSSGNSQVESKA 347
Query: 451 HHHWSDDATFTSDKCENDQSNLDCAVNDSSATRQSSSTSF--YHDSANHSSSGV--NGSG 506
+D + + + D V D S R S+ ++F Y++ A + N
Sbjct: 348 PSSNREDLQSLEQTLKKTREDRDYKVGDRSVLRHSNLSAFSKYNNGATSAKKAPEENVES 407
Query: 507 GSGSDGNV-----TSTGVDDELR--GTDSHRTSQREAALTKFRLKRKDRCYDKKV 554
S D + +S+ D+ L+ + S R +QREAAL KFRLKRK+RC++KKV
Sbjct: 408 CSPHDSPIAKLLGSSSSSDNPLKQQSSGSDRWAQREAALMKFRLKRKERCFEKKV 462
>PRR1_ARATH (Q9LKL2) Two-component response regulator-like APRR1
(Pseudo-response regulator 1) (Timing of CAB expression
1) (ABI3-interacting protein 1)
Length = 618
Score = 128 bits (322), Expect = 4e-29
Identities = 146/602 (24%), Positives = 246/602 (40%), Gaps = 123/602 (20%)
Query: 14 LPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILTEVD 73
+ ++ +RILL + D ++ + LL +CSY+V AV+ + + L + DID+IL E+D
Sbjct: 14 IDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEID 73
Query: 74 LPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNELRNL 133
LP G +L IT + IPVIMMS D V +V KC+ GAAD+L+KP+R NEL NL
Sbjct: 74 LPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNL 133
Query: 134 WQHVWRRQTITKPPQKLTLAHNNKLDAAIENKPASNDST--------GSVAST--QKNNE 183
W H+WRR+ + +K L+++ L + ++ P +N + S+ ST Q+ N
Sbjct: 134 WTHMWRRRRMLGLAEKNMLSYDFDLVGSDQSDPNTNSTNLFSDDTDDRSLRSTNPQRGNL 193
Query: 184 TSEAQ--STCTSPI------LGAESGSMENMQDAT--------------QLKSSSNLSDI 221
+ + S T+P+ LGA+ + ++ +K +SN +
Sbjct: 194 SHQENEWSVATAPVHARDGGLGADGTATSSLAVTAIEPPLDHLAGSHHEPMKRNSNPAQF 253
Query: 222 DAVKQDKSTQLEMESP----------KHNSEAGELSKGNPHISTEIRGCSDEL-LEPSSG 270
+ + ++ S + N + L GN + RG +++ + S G
Sbjct: 254 SSAPKKSRLKIGESSAFFTYVKSTVLRTNGQDPPLVDGNGSLHLH-RGLAEKFQVVASEG 312
Query: 271 AMDLIAAFGNLPKRTI--------------GNHSFHDGSTAKFEFDTQLELSTRGDFPAS 316
+ A PK T+ G+H H G+ KF+ AS
Sbjct: 313 INNTKQARRATPKSTVLRTNGQDPPLVNGNGSHHLHRGAAEKFQV------------VAS 360
Query: 317 EERLMLNHTNASAFS----QYSSSKLFSENSPHESHELCENTNISHRYGGKNQNHNPENT 372
E +N+T + S QY S +N H L + + +N+ N
Sbjct: 361 EG---INNTKQAHRSRGTEQYHSQGETLQNGASYPHSLERSRTLPTSMESHGRNYQEGNM 417
Query: 373 NSMVIGQSGQVKTKFPNSQLGFFPATGVSFDNVSTGDGDVFPSMLYTQLTPKSVCQKESS 432
N I Q ++K +SQ+ G F + + M + ++ +
Sbjct: 418 N---IPQVAMNRSK-DSSQVD-----GSGFSAPNAYPYYMHGVMNQVMMQSAAMMPQYGH 468
Query: 433 PFPTSTSSQSNNESMKSEHHHWSDDATFTSDKCENDQSNLDCAVNDSSATRQSSSTSFYH 492
P + N + +HH ++ ++ S + Q+ S H
Sbjct: 469 QIPHCQPNHPNGMTGYPYYHH-----------------PMNTSLQHSQMSLQNGQMSMVH 511
Query: 493 DSANHSSSGVNGSGGSGSDGNVTSTGVDDELRGTDSHRTSQREAALTKFRLKRKDRCYDK 552
S + + GN S +E+R ++ +RE AL KFR KR RC+DK
Sbjct: 512 HSWSPA-------------GNPPS----NEVR---VNKLDRREEALLKFRRKRNQRCFDK 551
Query: 553 KV 554
K+
Sbjct: 552 KI 553
>ARRC_ARATH (P62598) Two-component response regulator ARR12
Length = 596
Score = 97.1 bits (240), Expect = 1e-19
Identities = 48/121 (39%), Positives = 73/121 (59%), Gaps = 3/121 (2%)
Query: 19 LRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILTEVDLPSIS 78
+R+L V+ D + +I+ +LLR C Y V KA E L+ + DL++++VD+P +
Sbjct: 17 MRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPDMD 76
Query: 79 GFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNELRNLWQHVW 138
GF LL L+ +PVIM+S++ V K + GA D+L+KPVR EL+N+WQHV
Sbjct: 77 GFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVV 133
Query: 139 R 139
R
Sbjct: 134 R 134
>ARRA_ARATH (O49397) Two-component response regulator ARR10
(Receiver-like protein 4)
Length = 552
Score = 96.7 bits (239), Expect = 1e-19
Identities = 48/138 (34%), Positives = 78/138 (55%), Gaps = 3/138 (2%)
Query: 19 LRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILTEVDLPSIS 78
+R+L V+ D + +I+ LL++C Y V A E L+ + DL++++VD+P +
Sbjct: 17 MRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMD 76
Query: 79 GFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNELRNLWQHVW 138
GF LL L+ +PVIM+S++ V K + GA D+L+KPVR EL+N+WQHV
Sbjct: 77 GFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVV 133
Query: 139 RRQTITKPPQKLTLAHNN 156
R+ + K ++ N
Sbjct: 134 RKSKLKKNKSNVSNGSGN 151
>ARR1_ARATH (Q940D0) Two-component response regulator ARR1
Length = 690
Score = 95.5 bits (236), Expect = 3e-19
Identities = 51/139 (36%), Positives = 80/139 (56%), Gaps = 5/139 (3%)
Query: 5 NDNGDVERILPQ--TALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKA 62
N G E ++ + LR+L+V+ D + I+ +LR C Y+V A L+
Sbjct: 21 NQGGGGETVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNK 80
Query: 63 HDIDLILTEVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLI 122
H D+++++V +P + GF LL + +PVIMMS++DS S+V K + GA D+LI
Sbjct: 81 HGFDIVISDVHMPDMDGFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLI 137
Query: 123 KPVRRNELRNLWQHVWRRQ 141
KPVR L+N+WQHV R++
Sbjct: 138 KPVRMEALKNIWQHVVRKR 156
>ARR2_ARATH (Q9ZWJ9) Two-component response regulator ARR2
(Receiver-like protein 5)
Length = 664
Score = 89.4 bits (220), Expect = 2e-17
Identities = 46/123 (37%), Positives = 73/123 (58%), Gaps = 3/123 (2%)
Query: 19 LRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILTEVDLPSIS 78
LR+L+V+ D + I+ +L C Y+V A L+ + D+++++V +P +
Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMD 87
Query: 79 GFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNELRNLWQHVW 138
GF LL + +PVIMMS++DS S+V K + GA D+LIKPVR L+N+WQHV
Sbjct: 88 GFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVV 144
Query: 139 RRQ 141
R++
Sbjct: 145 RKK 147
>ARRB_ARATH (Q9FXD6) Two-component response regulator ARR11
(Receiver-like protein 3)
Length = 521
Score = 87.4 bits (215), Expect = 9e-17
Identities = 44/123 (35%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 19 LRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILTEVDLPSIS 78
LR+L+V+ D + +I+ +L+KCSY+V +A L+ + D+++++V++P +
Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMD 70
Query: 79 GFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNELRNLWQHVW 138
GF LL + +PVIMMS + S V K + GA D+L+KP+R EL+ +WQHV
Sbjct: 71 GFKLLEHV---GLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 139 RRQ 141
R++
Sbjct: 128 RKK 130
>REGA_DICDI (Q23917) 3',5'-cyclic-nucleotide phosphodiesterase regA
(EC 3.1.4.17) (PDEase regA)
Length = 793
Score = 87.0 bits (214), Expect = 1e-16
Identities = 59/163 (36%), Positives = 86/163 (52%), Gaps = 25/163 (15%)
Query: 19 LRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILTEVDLPSIS 78
+RIL+ + DD R+I+ LL+K Y V V +G AWE + DL+LT+V +P I+
Sbjct: 160 VRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQKYDLVLTDVMMPHIT 219
Query: 79 GFSLLTLITDHDFCKHIPVIMMS--------SNDSVSMVFKCMLKGAADFLIKPVRRNEL 130
GF LL I DH +HIPVI+MS +ND++ + G DFL KP+ + L
Sbjct: 220 GFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKI-------GGQDFLTKPIAKELL 272
Query: 131 R----NLWQHVWRRQTITKPPQKLTLAH----NNKLDAAIENK 165
+ + Q +W+R+ + K TLA NKL +E K
Sbjct: 273 KKKIDTVLQSIWQRR--KEEEYKATLAQEREKGNKLAKEMELK 313
Score = 32.3 bits (72), Expect = 3.4
Identities = 23/112 (20%), Positives = 53/112 (46%), Gaps = 17/112 (15%)
Query: 431 SSPFPTSTSSQSNNESMK-----------SEHHHWSDDATFTSDKCENDQSN------LD 473
+SP P+S+SS SNN+S + H +D+ ++ N+ +N +
Sbjct: 17 TSPSPSSSSSPSNNDSTSLKSMISGIENLNVHSKGNDNKNNNNNNNNNNSNNNEKQKDIV 76
Query: 474 CAVNDSSATRQSSSTSFYHDSANHSSSGVNGSGGSGSDGNVTSTGVDDELRG 525
N+SS+ +++T+ S ++S++ N + + ++ N+ + + + G
Sbjct: 77 SLENNSSSNNTTTTTTTTTTSNHNSNNNSNNNNNNINNNNINNNNYEPLVNG 128
>ARRI_ARATH (Q9FGT7) Two-component response regulator ARR18
Length = 635
Score = 85.5 bits (210), Expect = 3e-16
Identities = 46/168 (27%), Positives = 90/168 (53%), Gaps = 5/168 (2%)
Query: 19 LRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILTEVDLPSIS 78
+R+L V+ + + + + LL +C Y V + KA E L+ ++ DL++++V++P
Sbjct: 18 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 77
Query: 79 GFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNELRNLWQHVW 138
GF LL + + D +PVIM+S++ V K ++ GA D+L+KPV EL+N+W HV
Sbjct: 78 GFKLLEIGLEMD----LPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVV 133
Query: 139 RRQTITKPPQKLTLAHNNKLDAAIENKPASNDSTGSVASTQKNNETSE 186
++ I + L + ++ + +A + + +G + + + E
Sbjct: 134 KK-NIKSYAKLLPPSESDSVPSASRKRKDKVNDSGDEDDSDREEDDGE 180
>ARRE_ARATH (Q8L9Y3) Two-component response regulator ARR14
Length = 382
Score = 85.1 bits (209), Expect = 4e-16
Identities = 50/148 (33%), Positives = 84/148 (55%), Gaps = 3/148 (2%)
Query: 17 TALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILTEVDLPS 76
+ LRIL+V+ D S I+ +L + Y+V A L+ + DL+L++V +P
Sbjct: 9 SGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPG 68
Query: 77 ISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNELRNLWQH 136
++G++LL + + +PVIMMS + + V + GA D+LIKP+R EL+N+WQH
Sbjct: 69 MNGYNLLQQVGLLEM--DLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQH 126
Query: 137 VWRRQTITKPPQKLTLA-HNNKLDAAIE 163
V RR+ + K + + A +NK ++E
Sbjct: 127 VVRRKCVMKKELRSSQALEDNKNSGSLE 154
>ARR7_ARATH (Q9ZWS7) Two-component response regulator ARR7
Length = 206
Score = 78.6 bits (192), Expect = 4e-14
Identities = 54/193 (27%), Positives = 99/193 (50%), Gaps = 17/193 (8%)
Query: 8 GDVERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETL--------- 58
GD+ P+ L +L V+ R++I LLR S KV V G +A + L
Sbjct: 15 GDLTVTTPE--LHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGAS 72
Query: 59 KNKAHDIDLILTEVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAA 118
K ++LI+T+ +P +SG+ LL I + + +PV++MSS + + + +C+ +GA
Sbjct: 73 NLKDLKVNLIVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAE 132
Query: 119 DFLIKPVRRNELRNLWQHVWRRQTITKPPQKLTLAHNN--KLDAAIENKPASNDSTGSVA 176
+FL+KPV+ +++ + Q + R + + L+H+N KL + +S+D T
Sbjct: 133 EFLLKPVKLADVKRIKQLIMRNEA----EECKILSHSNKRKLQEDSDTSSSSHDDTSIKD 188
Query: 177 STQKNNETSEAQS 189
S+ SE+++
Sbjct: 189 SSCSKRMKSESEN 201
>ARRJ_ARATH (Q9M9B9) Putative two-component response regulator ARR19
Length = 407
Score = 77.0 bits (188), Expect = 1e-13
Identities = 37/126 (29%), Positives = 72/126 (56%), Gaps = 3/126 (2%)
Query: 21 ILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILTEVDLPSISGF 80
+L+V+ + +T + ++++ +Y+V+ D KA L + H+I++++ + +P I G
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 81 SLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNELRNLWQHVWRR 140
L IT +PV++MS ++ V K GA D+++KPV+ + N+WQH+ R+
Sbjct: 96 QALKSITSK---LDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRK 152
Query: 141 QTITKP 146
+ I KP
Sbjct: 153 RLIFKP 158
>ARR3_ARATH (Q9ZWS9) Two-component response regulator ARR3
Length = 231
Score = 76.3 bits (186), Expect = 2e-13
Identities = 59/203 (29%), Positives = 106/203 (52%), Gaps = 24/203 (11%)
Query: 15 PQTALRILLVEADDST--RQIIAALLRKCSYKVAAVRDGLKAWETL---KNKAH------ 63
P + ++ ++ DDS R +I LLR S KV AV G +A E L +KA
Sbjct: 27 PLDSDQVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDRL 86
Query: 64 DIDLILTEVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIK 123
+DLI+T+ +P ++G+ LL I + K +PV++MSS + ++ + +C+ +GA DFL+K
Sbjct: 87 KVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLK 146
Query: 124 PVRRNELRNLWQHVWR---------RQTITKPPQKLTLAHNNKL---DAAIENKPASNDS 171
PV+ +++ L ++ R ++ +T PP L+ + + D+ +E+ + D
Sbjct: 147 PVKLADVKRLRSYLTRDVKVAAEGNKRKLTTPPPPPPLSATSSMESSDSTVESPLSMVDD 206
Query: 172 TGSVASTQKNNETSEAQSTCTSP 194
S+ + + + TS S SP
Sbjct: 207 EDSLTMSPE-SATSLVDSPMRSP 228
>PRR4_ARATH (Q9FJ16) Putative two-component response regulator-like
APRR4 (Pseudo-response regulator 4)
Length = 292
Score = 75.5 bits (184), Expect = 4e-13
Identities = 54/181 (29%), Positives = 89/181 (48%), Gaps = 9/181 (4%)
Query: 19 LRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILTEVDLPSIS 78
LR+L+ + D S I+ L+K Y+V + KA TL+N + DL + +V+
Sbjct: 42 LRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNNAEGD 101
Query: 79 GFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNELRNLWQHV- 137
F L+ I +P+I++S +DSV V K M+ GAAD+LIKP+R +LR +++H+
Sbjct: 102 IFRFLSEIGSE---MDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHLV 158
Query: 138 ----WRRQTITKPPQKLTLAHNNKL-DAAIENKPASNDSTGSVASTQKNNETSEAQSTCT 192
RR +T +K ++ + D+ I N S S+ A + + C
Sbjct: 159 KKMRERRSVVTGEAEKAAGEKSSSVGDSTIRNPNKSKRSSCLEAEVNEEDRHDHNDRACA 218
Query: 193 S 193
S
Sbjct: 219 S 219
>ARRK_ARATH (Q9LZJ8) Putative two-component response regulator ARR20
Length = 426
Score = 73.9 bits (180), Expect = 1e-12
Identities = 44/135 (32%), Positives = 73/135 (53%), Gaps = 6/135 (4%)
Query: 7 NGDVERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDID 66
N D E L ++ R+LLV AD ++ + L+ + SY+V G +A L H+ID
Sbjct: 30 NDDDEEFLTKSN-RVLLVGADSNSS--LKNLMTQYSYQVTKYESGEEAMAFLMKNKHEID 86
Query: 67 LILTEVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVR 126
L++ + +P I+G L +I +PV++MS V + + GA DFL+KPV
Sbjct: 87 LVIWDFHMPDINGLDALNIIGKQ---MDLPVVIMSHEYKKETVMESIKYGACDFLVKPVS 143
Query: 127 RNELRNLWQHVWRRQ 141
+ + LW+HV+R++
Sbjct: 144 KEVIAVLWRHVYRKR 158
>ARR4_ARATH (O82798) Two-component response regulator ARR4 (Response
regulator 1)
Length = 259
Score = 73.9 bits (180), Expect = 1e-12
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 23/228 (10%)
Query: 19 LRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETL---KNKAH------DIDLIL 69
+ +L V+ R +I LLR S KV AV G +A E L KA +DLI+
Sbjct: 34 VHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLKVDLII 93
Query: 70 TEVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNE 129
T+ +P ++G+ LL I + + +PV++MSS + ++ + +C+ +GA DFL+KPV+ +
Sbjct: 94 TDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLAD 153
Query: 130 LRNLWQHVWRRQTITKPPQKLTLAHNNKLDAAIENKPASNDSTGSVASTQKNNETSEAQS 189
++ L H+ + + L++ NK P + S S T +S
Sbjct: 154 VKRLRSHL---------TKDVKLSNGNK-----RKLPEDSSSVNSSLPPPSPPLTISPES 199
Query: 190 TCTSPILGAESGSMENMQDATQLKSSSNLSDIDAVKQDKSTQLEMESP 237
+ + S S + +S S ID D T ESP
Sbjct: 200 SPPLTVSTESSDSSPPLSPVEIFSTSPLSSPIDDEDDDVLTSSSEESP 247
>ARRF_ARATH (Q7G8V2) Two-component response regulator ARR15
Length = 206
Score = 72.8 bits (177), Expect = 2e-12
Identities = 46/168 (27%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 19 LRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHD---------IDLIL 69
L +L V+ R++I LL+ + KV V G +A + L + ++LI+
Sbjct: 18 LHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLIV 77
Query: 70 TEVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNE 129
T+ +P ++G+ LL I + + IPV++MSS + + +CM++GA +FL+KPV+ +
Sbjct: 78 TDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLAD 137
Query: 130 LRNLWQHVWRRQTITKPPQKLTLAHNNKLDAAIENKPASNDSTGSVAS 177
++ L + + R + K L+ L I++ P+S+ ++ S +S
Sbjct: 138 VKRLKELIMRGGEAEEGKTK-KLSPKRILQNDIDSSPSSSSTSSSSSS 184
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.311 0.126 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,051,963
Number of Sequences: 164201
Number of extensions: 2734745
Number of successful extensions: 10628
Number of sequences better than 10.0: 399
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 285
Number of HSP's that attempted gapping in prelim test: 9188
Number of HSP's gapped (non-prelim): 774
length of query: 574
length of database: 59,974,054
effective HSP length: 116
effective length of query: 458
effective length of database: 40,926,738
effective search space: 18744446004
effective search space used: 18744446004
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 69 (31.2 bits)
Lotus: description of TM0105.6