
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0103.2
(681 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
HMW2_MYCPN (P75471) Cytadherence high molecular weight protein 2... 42 0.004
KDPG_SCHPO (O14019) Probable serine/threonine-protein kinase C29... 42 0.005
SECD_MYCTU (Q50634) Protein-export membrane protein secD 41 0.009
VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP) 38 0.077
SMOO_HUMAN (P53814) Smoothelin 38 0.077
MYSA_DROME (P05661) Myosin heavy chain, muscle 38 0.10
VASP_CANFA (P50551) Vasodilator-stimulated phosphoprotein (VASP) 37 0.17
PPOL_BOVIN (P18493) Poly [ADP-ribose] polymerase-1 (EC 2.4.2.30)... 36 0.29
M21_STRPY (P50468) M protein, serotype 2.1 precursor 36 0.29
MINT_HUMAN (Q96T58) Msx2-interacting protein (SMART/HDAC1 associ... 36 0.38
M49_STRPY (P16947) M protein, serotype 49 precursor 36 0.38
ENL_HUMAN (Q03111) ENL protein 36 0.38
ARP4_STRPY (P13050) IgA receptor precursor 36 0.38
CTF4_YEAST (Q01454) DNA polymerase alpha-binding protein (CTF4 p... 35 0.50
ATX7_HUMAN (O15265) Ataxin-7 (Spinocerebellar ataxia type 7 prot... 35 0.50
YL17_CAEEL (Q11102) Hypothetical protein C02F12.7 in chromosome X 35 0.65
DYNA_RAT (P28023) Dynactin 1 (150 kDa dynein-associated polypept... 35 0.65
VIM2_CARAU (P48672) Vimentin A2 (Fragment) 35 0.85
VASP_MOUSE (P70460) Vasodilator-stimulated phosphoprotein (VASP) 35 0.85
TDR3_MOUSE (Q91W18) Tudor domain containing protein 3 35 0.85
>HMW2_MYCPN (P75471) Cytadherence high molecular weight protein 2
(Cytadherence accessory protein 2)
Length = 1818
Score = 42.4 bits (98), Expect = 0.004
Identities = 25/86 (29%), Positives = 46/86 (53%)
Query: 531 RISQLEKTLAELRQEAQLESSVKADQIASTEADLENLRSDLAKKDDLLSSAKTQAHLDAK 590
+++Q +K ++R++ LE + Q+A L+N +++L K+ + L +A + D K
Sbjct: 792 KLNQAKKAFLQIRKQQLLEIASVKQQLAQKANLLKNQQAELDKQTEELEAAFLEQDTDKK 851
Query: 591 ALEEKLRSEDAVAAVSERGRGFFLAK 616
LE+ L S + + ER R F L K
Sbjct: 852 ELEKALHSVKSKQELLERERSFLLQK 877
>KDPG_SCHPO (O14019) Probable serine/threonine-protein kinase
C29A4.16 (EC 2.7.1.37)
Length = 636
Score = 42.0 bits (97), Expect = 0.005
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 464 PLGEEDPRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPI-VISSPRGPNLTSSANAPPPPA 522
P G P S R NS+ + T P + G+V + + V+S PN ++ +N P P +
Sbjct: 140 PSGSVPPSASVSRANST--ATTTPHKAGVVSNPAAANVHVLSVAASPNPSTPSNGPAPVS 197
Query: 523 HTSTPSVGRISQLEKTLAELRQEAQLESSVKADQIASTE 561
T+TPS +++L++ ++ Q + + +A+TE
Sbjct: 198 TTATPSRNPVTRLQRIFSQNSVSRQNSRTGRGAAVANTE 236
>SECD_MYCTU (Q50634) Protein-export membrane protein secD
Length = 573
Score = 41.2 bits (95), Expect = 0.009
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 18/164 (10%)
Query: 463 RPLGEE-DPRPSPKRLNSSEPSGTIPAQHGLV----DGSLSRPIVISSPRGPNLTSSANA 517
+P EE P PS + +P+ PAQ G G+ RP PN TS A+
Sbjct: 128 QPAAEEPQPAPSAEPQPPGQPAAPPPAQSGAPASPQPGAQPRPYPQDPAPSPNPTSPASP 187
Query: 518 PPPPAHTSTPSVGRISQLEKTLAE---LRQEAQLESSVKADQIASTEADLENLRSDLAKK 574
PP P P+ L + +A+ LRQ + A Q +T + +++ LA
Sbjct: 188 PPAPP-AEAPATDPRKDLAERIAQEKKLRQSTNQYMQMVALQFQATRCESDDI---LAGN 243
Query: 575 DD------LLSSAKTQAHLDAKALEEKLRSEDAVAAVSERGRGF 612
DD S+ A+L A ++ + ++A + + +RG G+
Sbjct: 244 DDPKLPLVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRGIGY 287
>VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP)
Length = 379
Score = 38.1 bits (87), Expect = 0.077
Identities = 30/104 (28%), Positives = 48/104 (45%), Gaps = 8/104 (7%)
Query: 465 LGEEDPRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPPAHT 524
+GE+ P+ + N EP +PAQ S+ RP +S P + SS++
Sbjct: 279 VGEKTPKD--ESANQEEPEARVPAQ----SESVRRPWEKNSTTLPRMKSSSSVTTSETQP 332
Query: 525 STPSVGRISQLEKTLAELRQEAQLESSVKADQIASTEADLENLR 568
TPS S L++ EL +E + E ++I EA ++ LR
Sbjct: 333 CTPSSSDYSDLQRVKQELLEEVKKELQKVKEEI--IEAFVQELR 374
>SMOO_HUMAN (P53814) Smoothelin
Length = 917
Score = 38.1 bits (87), Expect = 0.077
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 466 GEEDPRPSPKRLNSSEP--SGTIPAQHG-----LVDGSLSRPIVISSPRGPNLTSSAN-A 517
G +P PSP + S EP S T+P+ G L+ G P S PRGP+ T A+ A
Sbjct: 232 GSPEPPPSPPKTTSPEPQESPTLPSTEGQVVNKLLSGPKETPAAQSPPRGPSDTKRADVA 291
Query: 518 PPPPAHTS 525
P P S
Sbjct: 292 GPRPCQRS 299
>MYSA_DROME (P05661) Myosin heavy chain, muscle
Length = 1962
Score = 37.7 bits (86), Expect = 0.10
Identities = 34/111 (30%), Positives = 56/111 (49%), Gaps = 14/111 (12%)
Query: 534 QLEKTLAELRQEAQLESSVKADQIAST---EADLENLRSDLAKKDDLLSSAKT------Q 584
Q E+ LA+ ++ S+ A A+ E++L+ L SDL D+LL+ AK +
Sbjct: 1700 QAEQELADAHEQLNEVSAQNASISAAKRKLESELQTLHSDL---DELLNEAKNSEEKAKK 1756
Query: 585 AHLDAKALEEKLRSEDAVAAVSERGRGFFLAKAQVKHLHPLIDLSQMGAFK 635
A +DA L ++LR+E A E+ R + Q+K L +D ++ A K
Sbjct: 1757 AMVDAARLADELRAEQDHAQTQEKLRK--ALEQQIKELQVRLDEAEANALK 1805
>VASP_CANFA (P50551) Vasodilator-stimulated phosphoprotein (VASP)
Length = 383
Score = 37.0 bits (84), Expect = 0.17
Identities = 30/104 (28%), Positives = 48/104 (45%), Gaps = 7/104 (6%)
Query: 465 LGEEDPRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPPAHT 524
+GE+ P+ + EP +P ++ RP +S P + SS++ AH
Sbjct: 282 VGEKPPKDESA---NEEPEARVPVP--AQSETVRRPWEKNSTTLPRMKSSSSVTTSEAHP 336
Query: 525 STPSVGRISQLEKTLAELRQEAQLESSVKADQIASTEADLENLR 568
STPS S LE+ EL +E + E ++I EA ++ LR
Sbjct: 337 STPSSSDESDLERVKQELLEEVRKELQKVKEEI--IEAFVQELR 378
>PPOL_BOVIN (P18493) Poly [ADP-ribose] polymerase-1 (EC 2.4.2.30)
(PARP-1) (ADPRT) (NAD(+) ADP-ribosyltransferase-1)
(Poly[ADP-ribose] synthetase-1)
Length = 1015
Score = 36.2 bits (82), Expect = 0.29
Identities = 40/147 (27%), Positives = 58/147 (39%), Gaps = 11/147 (7%)
Query: 509 PNLTSSANAPPPPAHTSTPSVGRISQLEKTLAELRQEAQLESSVKADQIASTEADLENLR 568
P ++ A PP+ S P+ +K L+ ++ + S D++ +T L
Sbjct: 361 PESSTPVGAAAPPSAASAPAAVHSGPPDKPLSNMKILTLGKLSQNKDEVKATIEKLGGKL 420
Query: 569 SDLAKKDDLLSSAKTQAHLDAKALEEKLRSEDAVAAVSERGRGFFL--AKAQVKHLHPLI 626
+ A K L S K + K +EE E + VSE FL A K L L+
Sbjct: 421 TGTANKASLCISTKKEVDKLNKKMEEV--KEANIRVVSED----FLQDISASTKSLQELL 474
Query: 627 D---LSQMGAFKRVTPTGLVGPDDPPG 650
LS GA +V P VGP G
Sbjct: 475 STHLLSPWGAEVKVEPVEAVGPKGKSG 501
>M21_STRPY (P50468) M protein, serotype 2.1 precursor
Length = 407
Score = 36.2 bits (82), Expect = 0.29
Identities = 27/94 (28%), Positives = 42/94 (43%), Gaps = 7/94 (7%)
Query: 531 RISQLEKTLAELRQEAQLESSVKADQIASTEADLENLRSDLAKKDDLLSSAKTQAHLDAK 590
++ LEK EL + +L KA+ A EA+ + L+ LAK+ + L+ K +AK
Sbjct: 296 KLQALEKLNKELEEGKKLSEKEKAELQAKLEAEAKALKEQLAKQAEELAKLKGNQTPNAK 355
Query: 591 ALEEKLRSEDAVA-------AVSERGRGFFLAKA 617
+ RS A+ + E FF A A
Sbjct: 356 VAPQANRSRSAMTQQKRTLPSTGETANPFFTAAA 389
>MINT_HUMAN (Q96T58) Msx2-interacting protein (SMART/HDAC1 associated
repressor protein)
Length = 3664
Score = 35.8 bits (81), Expect = 0.38
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 3 PKRQTKGSKRNVVAATPLRC-VPPVRPPPPGGVPLEEKDVIAFRTRT---WKSLSAPAAR 58
P + + +V TP + VPP PPPP P++E+ FR + ++ P+
Sbjct: 2406 PSTENSSQEISVEERTPTKASVPPDLPPPPQPAPVDEEPQARFRVHSIIESDPVTPPSDP 2465
Query: 59 DLPAGTMPNQRSSLEKESSIWEISTESGGFCHEKPLDKL 97
+P T+P+ ++ SGG H+ P K+
Sbjct: 2466 SIPIPTLPSVTAAKLSP------PVASGGIPHQSPPTKV 2498
>M49_STRPY (P16947) M protein, serotype 49 precursor
Length = 389
Score = 35.8 bits (81), Expect = 0.38
Identities = 27/94 (28%), Positives = 42/94 (43%), Gaps = 7/94 (7%)
Query: 531 RISQLEKTLAELRQEAQLESSVKADQIASTEADLENLRSDLAKKDDLLSSAKTQAHLDAK 590
++ LEK EL + +L KA+ A EA+ + L+ LAK+ + L+ K +AK
Sbjct: 278 KLQALEKLNKELEEGKKLSEKEKAELQARLEAEAKALKEQLAKQAEELAKLKGNQTPNAK 337
Query: 591 ALEEKLRSEDAVA-------AVSERGRGFFLAKA 617
+ RS A+ + E FF A A
Sbjct: 338 VAPQANRSRSAMTQQKRTLPSTGETANPFFTAAA 371
>ENL_HUMAN (Q03111) ENL protein
Length = 559
Score = 35.8 bits (81), Expect = 0.38
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 458 QASGKRPLGEEDPRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANA 517
+AS KRP + P+PS K+ S G SR +SPR +SS+ +
Sbjct: 281 RASSKRPATADSPKPSAKKQKKSSSKG-------------SRSAPGTSPR--TSSSSSFS 325
Query: 518 PPPPAHTSTPSVGRISQLEKTLAELRQEAQLESSVKADQIASTEADLENLRSDLAKKDDL 577
PA + + G + E E ++ ++E S D+ + ++ S+ + D
Sbjct: 326 DKKPAKDKSSTRGEKVKAESEPREAKKALEVEESNSEDEASFKSESAQSSPSNSSSSSDS 385
Query: 578 LSSA---KTQAHLDA--KALEEKLRSEDA 601
S + +Q H +++ E L+SE++
Sbjct: 386 SSDSDFEPSQNHSQGPLRSMVEDLQSEES 414
>ARP4_STRPY (P13050) IgA receptor precursor
Length = 386
Score = 35.8 bits (81), Expect = 0.38
Identities = 27/94 (28%), Positives = 42/94 (43%), Gaps = 7/94 (7%)
Query: 531 RISQLEKTLAELRQEAQLESSVKADQIASTEADLENLRSDLAKKDDLLSSAKTQAHLDAK 590
++ LEK EL + +L KA+ A EA+ + L+ LAK+ + L+ K +AK
Sbjct: 275 KLQALEKLNKELEEGKKLSEKEKAELQARLEAEAKALKEQLAKQAEELAKLKGNQTPNAK 334
Query: 591 ALEEKLRSEDAVA-------AVSERGRGFFLAKA 617
+ RS A+ + E FF A A
Sbjct: 335 VAPQANRSRSAMTQQKRTLPSTGETANPFFTAAA 368
>CTF4_YEAST (Q01454) DNA polymerase alpha-binding protein (CTF4
protein) (POB1 protein) (Chromosome replication protein
CHL15)
Length = 926
Score = 35.4 bits (80), Expect = 0.50
Identities = 43/160 (26%), Positives = 62/160 (37%), Gaps = 34/160 (21%)
Query: 536 EKTLAELRQEAQLESSVKADQIASTEADLENL--RSDLAKKDDLLSSAK---------TQ 584
E ++ + ++ ESS K +E+DLENL D+ K D L S TQ
Sbjct: 352 ESVVSNIPDQSVAESSTKHGLFVDSESDLENLEGNDDINKSDKLFSDITQEANAEDVFTQ 411
Query: 585 AHLDAKALEEKLR-----SEDAVAAVSERGRGFFLAK--------AQVKHLHPL-IDLSQ 630
H L EK + ED + + G G+ K ++V H I L+
Sbjct: 412 THDGPSGLSEKRKYNFEDEEDFID--DDDGAGYISGKKPHNEHSYSRVHKTHSFPISLAN 469
Query: 631 MGAFKRV--TPTGLVGPDDPPGFVVERFLTEEHVELTQNV 668
G F+ + +P G P GF R+LT V V
Sbjct: 470 TGKFRYMPFSPAG-----TPFGFTDRRYLTMNEVGYVSTV 504
>ATX7_HUMAN (O15265) Ataxin-7 (Spinocerebellar ataxia type 7
protein)
Length = 892
Score = 35.4 bits (80), Expect = 0.50
Identities = 25/79 (31%), Positives = 34/79 (42%), Gaps = 7/79 (8%)
Query: 454 LLKIQASGKRPLGEEDPRPSPKRLNSS---EPSGTIPAQHGLVDGSLSRPIVISSPRGPN 510
L++ S + P DP P+P R + P G IP++ S +P S PR P
Sbjct: 398 LIRHPDSQQPPQPLRDPHPAPPRTSQEPHQNPHGVIPSESKPFVASKPKPHTPSLPRPPG 457
Query: 511 LTS----SANAPPPPAHTS 525
+ SA PPP H S
Sbjct: 458 CPAQQGGSAPIDPPPVHES 476
>YL17_CAEEL (Q11102) Hypothetical protein C02F12.7 in chromosome X
Length = 1130
Score = 35.0 bits (79), Expect = 0.65
Identities = 28/92 (30%), Positives = 50/92 (53%), Gaps = 17/92 (18%)
Query: 525 STPSVGRISQLEKTLAELRQEAQLESSVKADQIASTEA-------DLENLRSDLAKKDDL 577
ST + S+LEKT+A+L ++++S K+DQI + ++ +L KK++
Sbjct: 722 STKETEKDSELEKTIAQL----EIDNSSKSDQIEKLHLRVNDMLDQMGTIKDELVKKNEE 777
Query: 578 LS--SAKTQAHLDAKALEEKLRSEDAVAAVSE 607
+ SAKT L++ +E SE +A+V+E
Sbjct: 778 IKTISAKTAQLLESNTVE----SETKLASVTE 805
>DYNA_RAT (P28023) Dynactin 1 (150 kDa dynein-associated
polypeptide) (DP-150) (DAP-150) (p150-glued)
Length = 1280
Score = 35.0 bits (79), Expect = 0.65
Identities = 38/141 (26%), Positives = 65/141 (45%), Gaps = 22/141 (15%)
Query: 473 SPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPPAHTSTPSVGR- 531
S L+SSEPS PAQ L+ PI+ + P LTS APP P+ + R
Sbjct: 174 SAGELSSSEPS--TPAQT-----PLAAPIIPT----PALTSPGAAPPLPSPSKEEEGLRD 222
Query: 532 -ISQLEKTLAELR-----QEAQLES----SVKADQIASTEADLENLRSDLAKKDDLLSSA 581
+ LE+ L LR +A+L+ ++ +Q+ ++ ++ ++DL ++ A
Sbjct: 223 QVRDLEEKLETLRLKRSEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEAKEA 282
Query: 582 KTQAHLDAKALEEKLRSEDAV 602
K + +EE + DA+
Sbjct: 283 KEALEAKERYMEEMADTADAI 303
>VIM2_CARAU (P48672) Vimentin A2 (Fragment)
Length = 243
Score = 34.7 bits (78), Expect = 0.85
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 530 GRISQLEKTLAELRQEAQLESSVKADQIASTEADLENLRSDLAK 573
G LE+ + E+ + +ESS D IA E D+ N++ ++AK
Sbjct: 112 GTNESLERQMREIEENFAIESSSSQDNIARLEEDIRNMKDEMAK 155
>VASP_MOUSE (P70460) Vasodilator-stimulated phosphoprotein (VASP)
Length = 375
Score = 34.7 bits (78), Expect = 0.85
Identities = 28/93 (30%), Positives = 41/93 (43%), Gaps = 6/93 (6%)
Query: 465 LGEEDPRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPPAHT 524
+GE+ P+ SE +PAQ V RP +S P + SS++ AH
Sbjct: 275 VGEKPPKDESASQEESE--ARLPAQSEPV----RRPWEKNSTTLPRMKSSSSVTTSEAHP 328
Query: 525 STPSVGRISQLEKTLAELRQEAQLESSVKADQI 557
STP S LE+ EL +E + E ++I
Sbjct: 329 STPCSSDDSDLERVKQELLEEVRKELQKMKEEI 361
>TDR3_MOUSE (Q91W18) Tudor domain containing protein 3
Length = 650
Score = 34.7 bits (78), Expect = 0.85
Identities = 25/97 (25%), Positives = 43/97 (43%), Gaps = 7/97 (7%)
Query: 465 LGEEDPRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPPAHT 524
L E+P+ P+ L+ + G Q+G+ DGS SR + + R P N PP
Sbjct: 284 LNVEEPKSQPQHLHQGQHRGWNAEQNGMKDGSQSRHLPRNDTRQPR-----NERPPRFQK 338
Query: 525 STPSVGRISQLEKTLAELRQEAQLESSVKADQIASTE 561
TP+ S +E ++ + ++ SS + + E
Sbjct: 339 DTPT--SKSTVENSVLSRNRGSERPSSSSGSDVWAEE 373
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.317 0.134 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,730,099
Number of Sequences: 164201
Number of extensions: 3879617
Number of successful extensions: 13839
Number of sequences better than 10.0: 124
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 13618
Number of HSP's gapped (non-prelim): 314
length of query: 681
length of database: 59,974,054
effective HSP length: 117
effective length of query: 564
effective length of database: 40,762,537
effective search space: 22990070868
effective search space used: 22990070868
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)
Lotus: description of TM0103.2