Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0103.2
         (681 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

HMW2_MYCPN (P75471) Cytadherence high molecular weight protein 2...    42  0.004
KDPG_SCHPO (O14019) Probable serine/threonine-protein kinase C29...    42  0.005
SECD_MYCTU (Q50634) Protein-export membrane protein secD               41  0.009
VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP)       38  0.077
SMOO_HUMAN (P53814) Smoothelin                                         38  0.077
MYSA_DROME (P05661) Myosin heavy chain, muscle                         38  0.10
VASP_CANFA (P50551) Vasodilator-stimulated phosphoprotein (VASP)       37  0.17
PPOL_BOVIN (P18493) Poly [ADP-ribose] polymerase-1 (EC 2.4.2.30)...    36  0.29
M21_STRPY (P50468) M protein, serotype 2.1 precursor                   36  0.29
MINT_HUMAN (Q96T58) Msx2-interacting protein (SMART/HDAC1 associ...    36  0.38
M49_STRPY (P16947) M protein, serotype 49 precursor                    36  0.38
ENL_HUMAN (Q03111) ENL protein                                         36  0.38
ARP4_STRPY (P13050) IgA receptor precursor                             36  0.38
CTF4_YEAST (Q01454) DNA polymerase alpha-binding protein (CTF4 p...    35  0.50
ATX7_HUMAN (O15265) Ataxin-7 (Spinocerebellar ataxia type 7 prot...    35  0.50
YL17_CAEEL (Q11102) Hypothetical protein C02F12.7 in chromosome X      35  0.65
DYNA_RAT (P28023) Dynactin 1 (150 kDa dynein-associated polypept...    35  0.65
VIM2_CARAU (P48672) Vimentin A2 (Fragment)                             35  0.85
VASP_MOUSE (P70460) Vasodilator-stimulated phosphoprotein (VASP)       35  0.85
TDR3_MOUSE (Q91W18) Tudor domain containing protein 3                  35  0.85

>HMW2_MYCPN (P75471) Cytadherence high molecular weight protein 2
           (Cytadherence accessory protein 2)
          Length = 1818

 Score = 42.4 bits (98), Expect = 0.004
 Identities = 25/86 (29%), Positives = 46/86 (53%)

Query: 531 RISQLEKTLAELRQEAQLESSVKADQIASTEADLENLRSDLAKKDDLLSSAKTQAHLDAK 590
           +++Q +K   ++R++  LE +    Q+A     L+N +++L K+ + L +A  +   D K
Sbjct: 792 KLNQAKKAFLQIRKQQLLEIASVKQQLAQKANLLKNQQAELDKQTEELEAAFLEQDTDKK 851

Query: 591 ALEEKLRSEDAVAAVSERGRGFFLAK 616
            LE+ L S  +   + ER R F L K
Sbjct: 852 ELEKALHSVKSKQELLERERSFLLQK 877


>KDPG_SCHPO (O14019) Probable serine/threonine-protein kinase
           C29A4.16 (EC 2.7.1.37)
          Length = 636

 Score = 42.0 bits (97), Expect = 0.005
 Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 3/99 (3%)

Query: 464 PLGEEDPRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPI-VISSPRGPNLTSSANAPPPPA 522
           P G   P  S  R NS+  + T P + G+V    +  + V+S    PN ++ +N P P +
Sbjct: 140 PSGSVPPSASVSRANST--ATTTPHKAGVVSNPAAANVHVLSVAASPNPSTPSNGPAPVS 197

Query: 523 HTSTPSVGRISQLEKTLAELRQEAQLESSVKADQIASTE 561
            T+TPS   +++L++  ++     Q   + +   +A+TE
Sbjct: 198 TTATPSRNPVTRLQRIFSQNSVSRQNSRTGRGAAVANTE 236


>SECD_MYCTU (Q50634) Protein-export membrane protein secD
          Length = 573

 Score = 41.2 bits (95), Expect = 0.009
 Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 18/164 (10%)

Query: 463 RPLGEE-DPRPSPKRLNSSEPSGTIPAQHGLV----DGSLSRPIVISSPRGPNLTSSANA 517
           +P  EE  P PS +     +P+   PAQ G       G+  RP        PN TS A+ 
Sbjct: 128 QPAAEEPQPAPSAEPQPPGQPAAPPPAQSGAPASPQPGAQPRPYPQDPAPSPNPTSPASP 187

Query: 518 PPPPAHTSTPSVGRISQLEKTLAE---LRQEAQLESSVKADQIASTEADLENLRSDLAKK 574
           PP P     P+      L + +A+   LRQ       + A Q  +T  + +++   LA  
Sbjct: 188 PPAPP-AEAPATDPRKDLAERIAQEKKLRQSTNQYMQMVALQFQATRCESDDI---LAGN 243

Query: 575 DD------LLSSAKTQAHLDAKALEEKLRSEDAVAAVSERGRGF 612
           DD        S+    A+L A ++    + ++A + + +RG G+
Sbjct: 244 DDPKLPLVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRGIGY 287


>VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP)
          Length = 379

 Score = 38.1 bits (87), Expect = 0.077
 Identities = 30/104 (28%), Positives = 48/104 (45%), Gaps = 8/104 (7%)

Query: 465 LGEEDPRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPPAHT 524
           +GE+ P+   +  N  EP   +PAQ      S+ RP   +S   P + SS++        
Sbjct: 279 VGEKTPKD--ESANQEEPEARVPAQ----SESVRRPWEKNSTTLPRMKSSSSVTTSETQP 332

Query: 525 STPSVGRISQLEKTLAELRQEAQLESSVKADQIASTEADLENLR 568
            TPS    S L++   EL +E + E     ++I   EA ++ LR
Sbjct: 333 CTPSSSDYSDLQRVKQELLEEVKKELQKVKEEI--IEAFVQELR 374


>SMOO_HUMAN (P53814) Smoothelin
          Length = 917

 Score = 38.1 bits (87), Expect = 0.077
 Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 8/68 (11%)

Query: 466 GEEDPRPSPKRLNSSEP--SGTIPAQHG-----LVDGSLSRPIVISSPRGPNLTSSAN-A 517
           G  +P PSP +  S EP  S T+P+  G     L+ G    P   S PRGP+ T  A+ A
Sbjct: 232 GSPEPPPSPPKTTSPEPQESPTLPSTEGQVVNKLLSGPKETPAAQSPPRGPSDTKRADVA 291

Query: 518 PPPPAHTS 525
            P P   S
Sbjct: 292 GPRPCQRS 299


>MYSA_DROME (P05661) Myosin heavy chain, muscle
          Length = 1962

 Score = 37.7 bits (86), Expect = 0.10
 Identities = 34/111 (30%), Positives = 56/111 (49%), Gaps = 14/111 (12%)

Query: 534  QLEKTLAELRQEAQLESSVKADQIAST---EADLENLRSDLAKKDDLLSSAKT------Q 584
            Q E+ LA+  ++    S+  A   A+    E++L+ L SDL   D+LL+ AK       +
Sbjct: 1700 QAEQELADAHEQLNEVSAQNASISAAKRKLESELQTLHSDL---DELLNEAKNSEEKAKK 1756

Query: 585  AHLDAKALEEKLRSEDAVAAVSERGRGFFLAKAQVKHLHPLIDLSQMGAFK 635
            A +DA  L ++LR+E   A   E+ R     + Q+K L   +D ++  A K
Sbjct: 1757 AMVDAARLADELRAEQDHAQTQEKLRK--ALEQQIKELQVRLDEAEANALK 1805


>VASP_CANFA (P50551) Vasodilator-stimulated phosphoprotein (VASP)
          Length = 383

 Score = 37.0 bits (84), Expect = 0.17
 Identities = 30/104 (28%), Positives = 48/104 (45%), Gaps = 7/104 (6%)

Query: 465 LGEEDPRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPPAHT 524
           +GE+ P+       + EP   +P        ++ RP   +S   P + SS++     AH 
Sbjct: 282 VGEKPPKDESA---NEEPEARVPVP--AQSETVRRPWEKNSTTLPRMKSSSSVTTSEAHP 336

Query: 525 STPSVGRISQLEKTLAELRQEAQLESSVKADQIASTEADLENLR 568
           STPS    S LE+   EL +E + E     ++I   EA ++ LR
Sbjct: 337 STPSSSDESDLERVKQELLEEVRKELQKVKEEI--IEAFVQELR 378


>PPOL_BOVIN (P18493) Poly [ADP-ribose] polymerase-1 (EC 2.4.2.30)
           (PARP-1) (ADPRT) (NAD(+) ADP-ribosyltransferase-1)
           (Poly[ADP-ribose] synthetase-1)
          Length = 1015

 Score = 36.2 bits (82), Expect = 0.29
 Identities = 40/147 (27%), Positives = 58/147 (39%), Gaps = 11/147 (7%)

Query: 509 PNLTSSANAPPPPAHTSTPSVGRISQLEKTLAELRQEAQLESSVKADQIASTEADLENLR 568
           P  ++   A  PP+  S P+       +K L+ ++     + S   D++ +T   L    
Sbjct: 361 PESSTPVGAAAPPSAASAPAAVHSGPPDKPLSNMKILTLGKLSQNKDEVKATIEKLGGKL 420

Query: 569 SDLAKKDDLLSSAKTQAHLDAKALEEKLRSEDAVAAVSERGRGFFL--AKAQVKHLHPLI 626
           +  A K  L  S K +     K +EE    E  +  VSE     FL    A  K L  L+
Sbjct: 421 TGTANKASLCISTKKEVDKLNKKMEEV--KEANIRVVSED----FLQDISASTKSLQELL 474

Query: 627 D---LSQMGAFKRVTPTGLVGPDDPPG 650
               LS  GA  +V P   VGP    G
Sbjct: 475 STHLLSPWGAEVKVEPVEAVGPKGKSG 501


>M21_STRPY (P50468) M protein, serotype 2.1 precursor
          Length = 407

 Score = 36.2 bits (82), Expect = 0.29
 Identities = 27/94 (28%), Positives = 42/94 (43%), Gaps = 7/94 (7%)

Query: 531 RISQLEKTLAELRQEAQLESSVKADQIASTEADLENLRSDLAKKDDLLSSAKTQAHLDAK 590
           ++  LEK   EL +  +L    KA+  A  EA+ + L+  LAK+ + L+  K     +AK
Sbjct: 296 KLQALEKLNKELEEGKKLSEKEKAELQAKLEAEAKALKEQLAKQAEELAKLKGNQTPNAK 355

Query: 591 ALEEKLRSEDAVA-------AVSERGRGFFLAKA 617
              +  RS  A+        +  E    FF A A
Sbjct: 356 VAPQANRSRSAMTQQKRTLPSTGETANPFFTAAA 389


>MINT_HUMAN (Q96T58) Msx2-interacting protein (SMART/HDAC1 associated
            repressor protein)
          Length = 3664

 Score = 35.8 bits (81), Expect = 0.38
 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 10/99 (10%)

Query: 3    PKRQTKGSKRNVVAATPLRC-VPPVRPPPPGGVPLEEKDVIAFRTRT---WKSLSAPAAR 58
            P  +    + +V   TP +  VPP  PPPP   P++E+    FR  +      ++ P+  
Sbjct: 2406 PSTENSSQEISVEERTPTKASVPPDLPPPPQPAPVDEEPQARFRVHSIIESDPVTPPSDP 2465

Query: 59   DLPAGTMPNQRSSLEKESSIWEISTESGGFCHEKPLDKL 97
             +P  T+P+  ++             SGG  H+ P  K+
Sbjct: 2466 SIPIPTLPSVTAAKLSP------PVASGGIPHQSPPTKV 2498


>M49_STRPY (P16947) M protein, serotype 49 precursor
          Length = 389

 Score = 35.8 bits (81), Expect = 0.38
 Identities = 27/94 (28%), Positives = 42/94 (43%), Gaps = 7/94 (7%)

Query: 531 RISQLEKTLAELRQEAQLESSVKADQIASTEADLENLRSDLAKKDDLLSSAKTQAHLDAK 590
           ++  LEK   EL +  +L    KA+  A  EA+ + L+  LAK+ + L+  K     +AK
Sbjct: 278 KLQALEKLNKELEEGKKLSEKEKAELQARLEAEAKALKEQLAKQAEELAKLKGNQTPNAK 337

Query: 591 ALEEKLRSEDAVA-------AVSERGRGFFLAKA 617
              +  RS  A+        +  E    FF A A
Sbjct: 338 VAPQANRSRSAMTQQKRTLPSTGETANPFFTAAA 371


>ENL_HUMAN (Q03111) ENL protein
          Length = 559

 Score = 35.8 bits (81), Expect = 0.38
 Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 20/149 (13%)

Query: 458 QASGKRPLGEEDPRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANA 517
           +AS KRP   + P+PS K+   S   G             SR    +SPR    +SS+ +
Sbjct: 281 RASSKRPATADSPKPSAKKQKKSSSKG-------------SRSAPGTSPR--TSSSSSFS 325

Query: 518 PPPPAHTSTPSVGRISQLEKTLAELRQEAQLESSVKADQIASTEADLENLRSDLAKKDDL 577
              PA   + + G   + E    E ++  ++E S   D+ +      ++  S+ +   D 
Sbjct: 326 DKKPAKDKSSTRGEKVKAESEPREAKKALEVEESNSEDEASFKSESAQSSPSNSSSSSDS 385

Query: 578 LSSA---KTQAHLDA--KALEEKLRSEDA 601
            S +    +Q H     +++ E L+SE++
Sbjct: 386 SSDSDFEPSQNHSQGPLRSMVEDLQSEES 414


>ARP4_STRPY (P13050) IgA receptor precursor
          Length = 386

 Score = 35.8 bits (81), Expect = 0.38
 Identities = 27/94 (28%), Positives = 42/94 (43%), Gaps = 7/94 (7%)

Query: 531 RISQLEKTLAELRQEAQLESSVKADQIASTEADLENLRSDLAKKDDLLSSAKTQAHLDAK 590
           ++  LEK   EL +  +L    KA+  A  EA+ + L+  LAK+ + L+  K     +AK
Sbjct: 275 KLQALEKLNKELEEGKKLSEKEKAELQARLEAEAKALKEQLAKQAEELAKLKGNQTPNAK 334

Query: 591 ALEEKLRSEDAVA-------AVSERGRGFFLAKA 617
              +  RS  A+        +  E    FF A A
Sbjct: 335 VAPQANRSRSAMTQQKRTLPSTGETANPFFTAAA 368


>CTF4_YEAST (Q01454) DNA polymerase alpha-binding protein (CTF4
           protein) (POB1 protein) (Chromosome replication protein
           CHL15)
          Length = 926

 Score = 35.4 bits (80), Expect = 0.50
 Identities = 43/160 (26%), Positives = 62/160 (37%), Gaps = 34/160 (21%)

Query: 536 EKTLAELRQEAQLESSVKADQIASTEADLENL--RSDLAKKDDLLSSAK---------TQ 584
           E  ++ +  ++  ESS K      +E+DLENL    D+ K D L S            TQ
Sbjct: 352 ESVVSNIPDQSVAESSTKHGLFVDSESDLENLEGNDDINKSDKLFSDITQEANAEDVFTQ 411

Query: 585 AHLDAKALEEKLR-----SEDAVAAVSERGRGFFLAK--------AQVKHLHPL-IDLSQ 630
            H     L EK +      ED +    + G G+   K        ++V   H   I L+ 
Sbjct: 412 THDGPSGLSEKRKYNFEDEEDFID--DDDGAGYISGKKPHNEHSYSRVHKTHSFPISLAN 469

Query: 631 MGAFKRV--TPTGLVGPDDPPGFVVERFLTEEHVELTQNV 668
            G F+ +  +P G      P GF   R+LT   V     V
Sbjct: 470 TGKFRYMPFSPAG-----TPFGFTDRRYLTMNEVGYVSTV 504


>ATX7_HUMAN (O15265) Ataxin-7 (Spinocerebellar ataxia type 7
           protein)
          Length = 892

 Score = 35.4 bits (80), Expect = 0.50
 Identities = 25/79 (31%), Positives = 34/79 (42%), Gaps = 7/79 (8%)

Query: 454 LLKIQASGKRPLGEEDPRPSPKRLNSS---EPSGTIPAQHGLVDGSLSRPIVISSPRGPN 510
           L++   S + P    DP P+P R +      P G IP++      S  +P   S PR P 
Sbjct: 398 LIRHPDSQQPPQPLRDPHPAPPRTSQEPHQNPHGVIPSESKPFVASKPKPHTPSLPRPPG 457

Query: 511 LTS----SANAPPPPAHTS 525
             +    SA   PPP H S
Sbjct: 458 CPAQQGGSAPIDPPPVHES 476


>YL17_CAEEL (Q11102) Hypothetical protein C02F12.7 in chromosome X
          Length = 1130

 Score = 35.0 bits (79), Expect = 0.65
 Identities = 28/92 (30%), Positives = 50/92 (53%), Gaps = 17/92 (18%)

Query: 525 STPSVGRISQLEKTLAELRQEAQLESSVKADQIASTEA-------DLENLRSDLAKKDDL 577
           ST    + S+LEKT+A+L    ++++S K+DQI             +  ++ +L KK++ 
Sbjct: 722 STKETEKDSELEKTIAQL----EIDNSSKSDQIEKLHLRVNDMLDQMGTIKDELVKKNEE 777

Query: 578 LS--SAKTQAHLDAKALEEKLRSEDAVAAVSE 607
           +   SAKT   L++  +E    SE  +A+V+E
Sbjct: 778 IKTISAKTAQLLESNTVE----SETKLASVTE 805


>DYNA_RAT (P28023) Dynactin 1 (150 kDa dynein-associated
           polypeptide) (DP-150) (DAP-150) (p150-glued)
          Length = 1280

 Score = 35.0 bits (79), Expect = 0.65
 Identities = 38/141 (26%), Positives = 65/141 (45%), Gaps = 22/141 (15%)

Query: 473 SPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPPAHTSTPSVGR- 531
           S   L+SSEPS   PAQ       L+ PI+ +    P LTS   APP P+ +      R 
Sbjct: 174 SAGELSSSEPS--TPAQT-----PLAAPIIPT----PALTSPGAAPPLPSPSKEEEGLRD 222

Query: 532 -ISQLEKTLAELR-----QEAQLES----SVKADQIASTEADLENLRSDLAKKDDLLSSA 581
            +  LE+ L  LR      +A+L+      ++ +Q+   ++ ++  ++DL ++      A
Sbjct: 223 QVRDLEEKLETLRLKRSEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEAKEA 282

Query: 582 KTQAHLDAKALEEKLRSEDAV 602
           K       + +EE   + DA+
Sbjct: 283 KEALEAKERYMEEMADTADAI 303


>VIM2_CARAU (P48672) Vimentin A2 (Fragment)
          Length = 243

 Score = 34.7 bits (78), Expect = 0.85
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 530 GRISQLEKTLAELRQEAQLESSVKADQIASTEADLENLRSDLAK 573
           G    LE+ + E+ +   +ESS   D IA  E D+ N++ ++AK
Sbjct: 112 GTNESLERQMREIEENFAIESSSSQDNIARLEEDIRNMKDEMAK 155


>VASP_MOUSE (P70460) Vasodilator-stimulated phosphoprotein (VASP)
          Length = 375

 Score = 34.7 bits (78), Expect = 0.85
 Identities = 28/93 (30%), Positives = 41/93 (43%), Gaps = 6/93 (6%)

Query: 465 LGEEDPRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPPAHT 524
           +GE+ P+        SE    +PAQ   V     RP   +S   P + SS++     AH 
Sbjct: 275 VGEKPPKDESASQEESE--ARLPAQSEPV----RRPWEKNSTTLPRMKSSSSVTTSEAHP 328

Query: 525 STPSVGRISQLEKTLAELRQEAQLESSVKADQI 557
           STP     S LE+   EL +E + E     ++I
Sbjct: 329 STPCSSDDSDLERVKQELLEEVRKELQKMKEEI 361


>TDR3_MOUSE (Q91W18) Tudor domain containing protein 3
          Length = 650

 Score = 34.7 bits (78), Expect = 0.85
 Identities = 25/97 (25%), Positives = 43/97 (43%), Gaps = 7/97 (7%)

Query: 465 LGEEDPRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPPAHT 524
           L  E+P+  P+ L+  +  G    Q+G+ DGS SR +  +  R P      N  PP    
Sbjct: 284 LNVEEPKSQPQHLHQGQHRGWNAEQNGMKDGSQSRHLPRNDTRQPR-----NERPPRFQK 338

Query: 525 STPSVGRISQLEKTLAELRQEAQLESSVKADQIASTE 561
            TP+    S +E ++    + ++  SS     + + E
Sbjct: 339 DTPT--SKSTVENSVLSRNRGSERPSSSSGSDVWAEE 373


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.317    0.134    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,730,099
Number of Sequences: 164201
Number of extensions: 3879617
Number of successful extensions: 13839
Number of sequences better than 10.0: 124
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 13618
Number of HSP's gapped (non-prelim): 314
length of query: 681
length of database: 59,974,054
effective HSP length: 117
effective length of query: 564
effective length of database: 40,762,537
effective search space: 22990070868
effective search space used: 22990070868
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)


Lotus: description of TM0103.2