BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0101.12
         (310 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NUM1_YEAST (Q00402) Nuclear migration protein NUM1                     42  0.001
CU13_HUMAN (O95447) Protein C21orf13                                   39  0.021
ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (X-li...    37  0.048
USO1_YEAST (P25386) Intracellular protein transport protein USO1       37  0.082
COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contain...    35  0.18
RBMG_HUMAN (Q9UPN6) Putative RNA-binding protein 16 (RNA binding...    35  0.24
IF3X_YEAST (Q03690) Eukaryotic translation initiation factor 3 1...    35  0.24
ROC1_PANTR (P61584) Rho-associated protein kinase 1 (EC 2.7.1.37...    35  0.31
ROC1_HUMAN (Q13464) Rho-associated protein kinase 1 (EC 2.7.1.37...    35  0.31
CUT1_MOUSE (P53564) CCAAT displacement protein (CDP) (Cut-like 1...    35  0.31
YL17_CAEEL (Q11102) Hypothetical protein C02F12.7 in chromosome X      34  0.41
YG18_YEAST (P53207) Hypothetical 71.4 kDa protein in SEC9-MSB2 i...    34  0.41
REST_CHICK (O42184) Restin (Cytoplasmic linker protein-170) (CLI...    34  0.41
RBP2_PLAVB (Q00799) Reticulocyte binding protein 2 precursor (Pv...    34  0.41
PEPL_HUMAN (O60437) Periplakin (195 kDa cornified envelope precu...    34  0.41
DR36_ARATH (Q8VZC7) Probable disease resistance protein At5g45510      34  0.41
CUT1_HUMAN (P39880) CCAAT displacement protein (CDP) (Cut-like 1)      33  0.69
HEPH_HUMAN (Q9BQS7) Hephaestin precursor (EC 1.-.-.-) (UNQ2562/P...    33  0.90
CYL1_BOVIN (P35662) Cylicin I (Multiple-band polypeptide I)            33  0.90
YKD1_CAEEL (Q03560) Hypothetical protein B0464.2 in chromosome III     33  1.2

>NUM1_YEAST (Q00402) Nuclear migration protein NUM1
          Length = 2748

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 55/241 (22%), Positives = 95/241 (38%), Gaps = 40/241 (16%)

Query: 40  EDELTSAEEEASLENSKAMNAIFNAVDKNM---FRLINTCTVAKDAWEILKTTHEGTTRV 96
           ++ L+   EE + +    M  + +  D N     +L N     +   E+ K T +     
Sbjct: 132 KESLSDKIEELTNQKKSFMKELDSTKDLNWDLESKLTNLSMECRQLKELKKKTEKSWNDE 191

Query: 97  RMSRLQMLTTRFENLTMTE--------------DERISEYHMRVRDLSNASFALGEPMSD 142
           + S L++L T  E LT+T+              D+ ISE   R+ DL+N +  L   +SD
Sbjct: 192 KES-LKLLKTDLEILTLTKNGMENDLSSQKLHYDKEISELKERILDLNNENDRLLISVSD 250

Query: 143 -EKLVRKILRSVTSKFAMKVIAIEEAQDISSLKVDELIGSLQTYKLKLGEKPEKKTKSIA 201
               +  +  + T +  ++    +    ISSLK                 K +KK     
Sbjct: 251 LTSEINSLQSNRTERIKIQKQLDDAKASISSLK----------------RKVQKKYYQKQ 294

Query: 202 FVSNTTEGDDADSESENLSEALALLARKFNRALRKIDRRTRPNVQDIKSDNSKSYNSQRK 261
             S+TT   D DSE     E +  +  + +  +      T P+V+DI  D  K Y+ +  
Sbjct: 295 HTSDTTVTSDPDSEGTTSEEDIFDIVIEIDHMI-----ETGPSVEDISEDLVKKYSEKNN 349

Query: 262 V 262
           +
Sbjct: 350 M 350


>CU13_HUMAN (O95447) Protein C21orf13
          Length = 670

 Score = 38.5 bits (88), Expect = 0.021
 Identities = 37/150 (24%), Positives = 71/150 (46%), Gaps = 6/150 (4%)

Query: 130 SNASFALGEPMSDEKLVRKILRSVTSKFAMKVIAIEEAQDISSLKVDELIGSLQTYK--L 187
           +N    + +  ++ K +R++LR    K       + E  D   LK  +++ +LQ      
Sbjct: 194 NNLPQIMAKHQNEVKNLRQLLRKSQEKERTLSRKLRET-DSQLLKTKDILQALQKLSEDK 252

Query: 188 KLGEKPEKKTKSIAFVSNTTEGDDADSESENLSEALALLARKFNRALRKIDRRTRPNVQD 247
            L E+ E+ T  ++ +  TT+ D  D + ++L + L L  R F+R L    R+T      
Sbjct: 253 NLAER-EELTHKLSII--TTKMDANDKKIQSLEKQLRLNCRAFSRQLAIETRKTLAAQTA 309

Query: 248 IKSDNSKSYNSQRKVKEEDKSGQNKGVQCH 277
            K+   +  + Q+K+KE+D+  + K +  H
Sbjct: 310 TKTLQVEVKHLQQKLKEKDRELEIKNIYSH 339


>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog
           (X-linked nuclear protein-1)
          Length = 1359

 Score = 37.4 bits (85), Expect = 0.048
 Identities = 33/149 (22%), Positives = 68/149 (45%), Gaps = 11/149 (7%)

Query: 164 IEEAQDISSLKVDELIGSLQTYKLKLGEKPEKKTKSIAFVSNTTEGDDADSESENLSEAL 223
           +E A+ I + + ++    L+  + + G+ P KK  +    ++++E DD D E        
Sbjct: 21  LEMARQIENERKEKRAQKLKEKREREGKPPPKKRPAKKRKASSSEEDDDDEEES------ 74

Query: 224 ALLARKFNRALRKIDRRTRPNVQDIKSDNSKSYNSQRKV--KEEDKSGQNKGVQCHECEG 281
               RK ++  RK  +    + +  + ++ K   S++KV  K+++KS + +     E E 
Sbjct: 75  ---PRKSSKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDED 131

Query: 282 YGHIRSECATYLKKQKKGMVVTWSDEDSE 310
               R + +    K+ K    + S E+SE
Sbjct: 132 SDEEREQKSKKKSKKTKKQTSSESSEESE 160


>USO1_YEAST (P25386) Intracellular protein transport protein USO1
          Length = 1790

 Score = 36.6 bits (83), Expect = 0.082
 Identities = 59/284 (20%), Positives = 110/284 (37%), Gaps = 35/284 (12%)

Query: 14   KAVVKGWKHPVKAQAEGSTSTPEEKPEDELTSAEEEASLENSKAM-NAIFNAVDKNMFRL 72
            K  ++  K  ++A  E      E   + E  S++E+A LE SK M   + + ++ N   L
Sbjct: 1462 KRDLESLKEQLRAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTIESNETEL 1521

Query: 73   INTCTVAKDAWEILKTT------------HEGTTRV-RMSRLQMLTTRFENLTMTEDERI 119
             ++    + + E L+ +            HE +  + R++  +      ++    E +  
Sbjct: 1522 KSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSKLRIEAKSG 1581

Query: 120  SEYHMRVRDLSNASFALGEPMSDEKLVRKILRSVTSKFAMKVIAIEEAQDISSLKVDELI 179
            SE     ++L+NA   +     +  +++  L  +  +   K   I+  Q+   L    L 
Sbjct: 1582 SELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKEL----LT 1637

Query: 180  GSLQTYKLKLGEKPEKKTKSIAFVSNTTEGDDADSESENLSEALALLARKFNRALRK--- 236
              L+  + +L    +K  KS        E      E   L E   LL  K+N  + K   
Sbjct: 1638 SRLKELEQELDSTQQKAQKSEE--ERRAEVRKFQVEKSQLDEKAMLLETKYNDLVNKEQA 1695

Query: 237  -------IDRRTRPNVQDIKS-----DNSKSYNSQRKVKEEDKS 268
                   + + T    Q+I+      DN K+ NS+ K   ED+S
Sbjct: 1696 WKRDEDTVKKTTDSQRQEIEKLAKELDNLKAENSKLKEANEDRS 1739


>COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contains:
           Copia VLP protein; Copia protease (EC 3.4.23.-)]
          Length = 1409

 Score = 35.4 bits (80), Expect = 0.18
 Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 16/158 (10%)

Query: 151 RSVTSKFAMK--VIAIEEAQDISSLKVDELIGSLQTYKLKLGEKPEKKTK-SIAFVSNTT 207
           +S+ S+ A++  +++++ + ++S L    +   L +  L  G K E+  K S   ++  +
Sbjct: 91  KSLASQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPS 150

Query: 208 EGDDADSESENLSEALALLARKFNRAL-RKIDRRTRPN------VQDIKSDNSKSY---- 256
             D   +  E LSE    LA   NR L ++I  +   N      +  I  +N+ +Y    
Sbjct: 151 CYDGIITAIETLSEENLTLAFVKNRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNL 210

Query: 257 --NSQRKVKEEDKSGQNKGVQCHECEGYGHIRSECATY 292
             N   K K+  K      V+CH C   GHI+ +C  Y
Sbjct: 211 FKNRVTKPKKIFKGNSKYKVKCHHCGREGHIKKDCFHY 248


>RBMG_HUMAN (Q9UPN6) Putative RNA-binding protein 16 (RNA binding
           motif protein 16)
          Length = 1271

 Score = 35.0 bits (79), Expect = 0.24
 Identities = 15/40 (37%), Positives = 27/40 (67%)

Query: 235 RKIDRRTRPNVQDIKSDNSKSYNSQRKVKEEDKSGQNKGV 274
           RK  +R+R   ++ K  +S+SY+S+R+ +E +K  Q KG+
Sbjct: 425 RKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGL 464


>IF3X_YEAST (Q03690) Eukaryotic translation initiation factor 3 135
           kDa subunit (eIF3 p135) (Translation initiation factor
           eIF3, p135 subunit)
          Length = 1277

 Score = 35.0 bits (79), Expect = 0.24
 Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 5/150 (3%)

Query: 130 SNASFALGEPMSDEKLVRKILRSVTSKFAMKV--IAIEEAQDISS-LKVDELIGSLQTYK 186
           ++ SF +G+    + ++  +    +SK+   V    IE    +S  + + E++G     K
Sbjct: 41  NDISFEIGKESKIQTVLDVLAMIPSSKYLTNVGLKTIEGDSQLSDEMSIKEIVGEKSELK 100

Query: 187 LKLGEKPEKKTKSIAFVSNTTEGDD-ADSESENLSEALALLARKFNRA-LRKIDRRTRPN 244
           L+L  KP    +++  V    +    A   S+ LSE        F+   L  I  R++  
Sbjct: 101 LQLILKPYSAREALKHVITVRDFIGFAQETSDGLSEFAISTGSSFSSLPLGPIKERSKQE 160

Query: 245 VQDIKSDNSKSYNSQRKVKEEDKSGQNKGV 274
            +D KSD  +  N+ + V +E+K   N+ V
Sbjct: 161 EKDEKSDPEEKKNTFKDVTDEEKLKFNEMV 190


>ROC1_PANTR (P61584) Rho-associated protein kinase 1 (EC 2.7.1.37)
           (Rho-associated, coiled-coil containing protein kinase
           1) (p160 ROCK-1) (p160ROCK) (Fragment)
          Length = 1003

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 46/231 (19%), Positives = 89/231 (37%), Gaps = 21/231 (9%)

Query: 40  EDELTSAEEEASLENSKAMNAIFNAVDKNMFRLINTCTVAKDAWEILKTTHEGT--TRVR 97
           +  +   + +A  EN K  N            + N  +  KD  E LK   + +     +
Sbjct: 141 QHRINEYQRKAEQENEKRRN------------VENEVSTLKDQLEDLKKVSQNSQLANEK 188

Query: 98  MSRLQMLTTRFENLTMTEDE---RISEYHMRVRDLSNASFALGEPMSDEKLVRKILRSVT 154
           +S+LQ       +L  TE +   R+ + H  +    +   +L   + +   + +  +S T
Sbjct: 189 LSQLQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQT 248

Query: 155 SKFAMKVIAIEEAQDISSLKVDELIGSLQTYKLKLGEKPEKKTKSIAFV-SNTTEGDDAD 213
            K   ++ AI EA+        E+IG LQ     L E+ +    ++  V     E  D  
Sbjct: 249 DKDYYQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDML 308

Query: 214 SESENLSEALALLARKFNRALRKIDRRTRPNVQDIKSDNSKSYNSQRKVKE 264
           + SE     L +     N  L+ + +R    V + K   ++  +  + ++E
Sbjct: 309 NHSEKEKNNLEI---DLNYKLKSLQQRLEQEVNEHKVTKARLTDKHQSIEE 356


>ROC1_HUMAN (Q13464) Rho-associated protein kinase 1 (EC 2.7.1.37)
           (Rho-associated, coiled-coil containing protein kinase
           1) (p160 ROCK-1) (p160ROCK)
          Length = 1354

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 46/231 (19%), Positives = 89/231 (37%), Gaps = 21/231 (9%)

Query: 40  EDELTSAEEEASLENSKAMNAIFNAVDKNMFRLINTCTVAKDAWEILKTTHEGT--TRVR 97
           +  +   + +A  EN K  N            + N  +  KD  E LK   + +     +
Sbjct: 492 QHRINEYQRKAEQENEKRRN------------VENEVSTLKDQLEDLKKVSQNSQLANEK 539

Query: 98  MSRLQMLTTRFENLTMTEDE---RISEYHMRVRDLSNASFALGEPMSDEKLVRKILRSVT 154
           +S+LQ       +L  TE +   R+ + H  +    +   +L   + +   + +  +S T
Sbjct: 540 LSQLQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQT 599

Query: 155 SKFAMKVIAIEEAQDISSLKVDELIGSLQTYKLKLGEKPEKKTKSIAFV-SNTTEGDDAD 213
            K   ++ AI EA+        E+IG LQ     L E+ +    ++  V     E  D  
Sbjct: 600 DKDYYQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDML 659

Query: 214 SESENLSEALALLARKFNRALRKIDRRTRPNVQDIKSDNSKSYNSQRKVKE 264
           + SE     L +     N  L+ + +R    V + K   ++  +  + ++E
Sbjct: 660 NHSEKEKNNLEI---DLNYKLKSLQQRLEQEVNEHKVTKARLTDKHQSIEE 707


>CUT1_MOUSE (P53564) CCAAT displacement protein (CDP) (Cut-like 1)
           (Homeobox protein Cux) (Fragment)
          Length = 1395

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 39/188 (20%), Positives = 84/188 (43%), Gaps = 8/188 (4%)

Query: 6   KSIDIKTWKAVVKGWKHPVKAQAEGSTSTPEEKPEDELTSAEEEASLENSKAMNAIFNAV 65
           + + IK  K  ++ ++  +K+QAE      E+K +++   AE+E  L+ ++         
Sbjct: 15  QEVTIKALKEKIREYEQTLKSQAETIALEKEQKLQNDF--AEKERKLQETQMSTTSKLEE 72

Query: 66  DKNMFRLINTCTVAKDAWEI--LKTTHEGTTRVRMSRLQMLTTRFENLTMTEDERISEYH 123
            ++  + + T  + K   E+  LKT ++  T  +   ++M+ T  E      +    E  
Sbjct: 73  AEHKLQTLQT-ALEKTRTELFDLKTKYDEETTAKADEIEMIMTDLERANQRAEVAQREAE 131

Query: 124 MRVRDLSNASFALGEPMSDEKLVRKILRSVTSKFAMKVIAIEEAQDISSLKVDELIGSLQ 183
                LS+A+ +L +  S  +    +   V ++ +++V    + ++I+ L  D  +  LQ
Sbjct: 132 TLREQLSSANHSL-QLASQIQKAPDVAIEVLTRSSLEVELAAKEREIAQLVED--VQRLQ 188

Query: 184 TYKLKLGE 191
               KL E
Sbjct: 189 ASLTKLRE 196


>YL17_CAEEL (Q11102) Hypothetical protein C02F12.7 in chromosome X
          Length = 1130

 Score = 34.3 bits (77), Expect = 0.41
 Identities = 54/238 (22%), Positives = 96/238 (39%), Gaps = 21/238 (8%)

Query: 37  EKPEDELTSAEEEASLENSKAMNAIFNAVDKNMFRLINTCTVAKDAWEILKTTHEGTTRV 96
           E+  + +T  + E      +    I +  D+N     NT    +   E  K TH  T RV
Sbjct: 581 EEYRERITGKDAEILNLRKQLEKEISHTEDRNRLLHENT----QKELEAHKETHTETVRV 636

Query: 97  RMSRLQMLTTRFENLTMTEDERISEYHMRVRDLSNASFALGEPMSDEKLVRKILRSVTSK 156
             + +    + FEN    E E   E   ++R+L   +  L   M   K V + L + TS 
Sbjct: 637 LEAEIDQFKSAFEN----EQEYGKEKSAKIRELEAQNKTLLSEMEKVKHVAENLEAFTSD 692

Query: 157 FAMKVIAIE-EAQDISSLKVDELIGSLQTYKLKLGEKPEKKTKSIA--FVSNTTEGDDAD 213
               +  +E + ++I  LK  E+    +    K  EK  +  K+IA   + N+++ D  +
Sbjct: 693 KDNLLEELESKNKNIEHLK-QEIAQLNEKISTKETEKDSELEKTIAQLEIDNSSKSDQIE 751

Query: 214 SESENLSEALALLAR------KFNRALRKIDRRTRPNVQDIKSDNSKSYNSQRKVKEE 265
                +++ L  +        K N  ++ I  +T    Q ++S+  +S      V EE
Sbjct: 752 KLHLRVNDMLDQMGTIKDELVKKNEEIKTISAKT---AQLLESNTVESETKLASVTEE 806


>YG18_YEAST (P53207) Hypothetical 71.4 kDa protein in SEC9-MSB2
           intergenic region
          Length = 620

 Score = 34.3 bits (77), Expect = 0.41
 Identities = 47/239 (19%), Positives = 98/239 (40%), Gaps = 40/239 (16%)

Query: 62  FNAVDKNMFRLINTCTVAKDAWEILKTTHEG---TTRVRMSRLQMLTTRFENLTMTEDER 118
           F+ VD++    +NT    K  +  ++  HE       + ++  + +  R   +   + E+
Sbjct: 173 FSKVDEDE-AFVNTLNYCKALFAFIRKLHEDFKIELHLDLNTKEYVEDRTGTIPSVKPEK 231

Query: 119 ISEYHM---RVRDLSNASFALGEPMSDEKLVRKILRSVTS---------------KFAMK 160
            SE++     + D ++   +  E + D     K+  +  S               +F  K
Sbjct: 232 ASEFYSVFKNIEDQTDERNSKKEQLDDSSTQYKVDTNTLSDLPSDALDQLCKDIIEFRTK 291

Query: 161 VIAIEEAQDISSLKVDELIGSLQTYKLKLGEKPEKKTKSIAFVSNTTEGDDADSESEN-- 218
           V++IE+ + + S   +      Q ++++      +K  S A  S  TE +D + E E+  
Sbjct: 292 VVSIEKEKKMKSTYEES---RRQRHQMQKVFDQIRKNHSGAKGSANTEEEDTNMEDEDEE 348

Query: 219 --LSEALALLARKFNRALRKIDRR-----------TRPNVQDIKSDNSKSYNSQRKVKE 264
               + LAL  RK  R L + +RR           T P ++ I++D   + N +  +++
Sbjct: 349 DDTEDDLALEKRKEERDLEESNRRYEDMLHQLHSNTEPKIKSIRADIMSAENYEEHLEK 407


>REST_CHICK (O42184) Restin (Cytoplasmic linker protein-170)
            (CLIP-170)
          Length = 1433

 Score = 34.3 bits (77), Expect = 0.41
 Identities = 51/245 (20%), Positives = 92/245 (36%), Gaps = 36/245 (14%)

Query: 47   EEEASLENSKA-MNAIFNAVDKNMFRLINTCTVAKDAWEILKTTHEGTTRVRMSRLQMLT 105
            EE ASL+ S +  +A+    D+ + +L N  TV +      KT            LQ + 
Sbjct: 1217 EERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKT------------LQSVV 1264

Query: 106  TRFENLTMTEDERISEYHMRVRDLSNASFALGEPMSDEKLVRKILRSVTSKFAMKVIAIE 165
               E+  +  +E++     +++  S     +  P  D          + +       A +
Sbjct: 1265 KTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTSPSGD----------IAANLLQDESAED 1314

Query: 166  EAQDISSLKVDELIGSLQTYKLKLGEKPEKKTKSIAFVSNTTEGDDADSESENLSEALAL 225
            + Q+I  L  + +I  LQ    +L  K ++  ++ A   N  E  + DSE E LS+    
Sbjct: 1315 KQQEIDFL--NSVIVDLQRRNEELNLKIQRMCEA-ALNGNEEETINYDSEEEGLSKKTPR 1371

Query: 226  LARKFNRALRKIDRRTRPN-VQDIKSDNSKSYNSQRKVKEEDKSGQNKGVQCHECEGYGH 284
            L           D    P   Q ++     +Y+  R+ +            C  CE +GH
Sbjct: 1372 LFCDICGCFDLHDTEDCPTQAQMLEEPPHSTYHGSRREERP---------YCDTCEMFGH 1422

Query: 285  IRSEC 289
              ++C
Sbjct: 1423 WTADC 1427


>RBP2_PLAVB (Q00799) Reticulocyte binding protein 2 precursor
            (PvRBP-2)
          Length = 2867

 Score = 34.3 bits (77), Expect = 0.41
 Identities = 55/275 (20%), Positives = 106/275 (38%), Gaps = 36/275 (13%)

Query: 45   SAEEEASLENSKAMNAI------FNAVDKNMFRLINT-------CTVAKDAWEILKTTHE 91
            +AE+E  L N K+ NA         +V  N+  + N         + AKD  + +K T E
Sbjct: 1594 NAEDE--LNNDKSTNAKVLIETNLESVKHNLSEITNIKQGGEKIYSKAKDIMQKIKATSE 1651

Query: 92   GTTRVRMSR-----------LQMLTTRFENLTMTEDERISEYHMRVRDLSNA------SF 134
             T    + +           L  +TT   NL +TE  R++     + ++  A      ++
Sbjct: 1652 NTAEKTLEKVKDDQSNYVNYLNQITTE-RNLIVTEKNRLNGIDSTITNIEGALKESKGNY 1710

Query: 135  ALG--EPMSDEKLVRKILRSVTSKFAMKVIA-IEEAQDISSLKVDELIGSLQTYKLKLGE 191
             +G  E + +    RK+   +T K     +       +   L   +   ++  Y+ K+GE
Sbjct: 1711 EIGFLEKLEEIGKNRKLKVDITKKSINSTVGNFSSLFNNFDLNQYDFNKNINDYENKMGE 1770

Query: 192  KPEKKTKSIAFVSNTTEGDDADSESENLSEALALLARKFNRALRKIDRRTRPNVQDIKSD 251
               +   S+  +S        ++   N ++ L L A+K    L   +      ++D+K  
Sbjct: 1771 IYNEFEGSLNKISENLRNASENTSDYNSAKTLRLEAQKEKVNLLNKEEEANKYLRDVKKV 1830

Query: 252  NSKSYNSQRKVKEEDKSGQNKGVQCHECEGYGHIR 286
             S  +    K   +  +   K  Q    EG+G+++
Sbjct: 1831 ESFRFIFNMKESLDKINEMIKKEQLTVNEGHGNVK 1865


>PEPL_HUMAN (O60437) Periplakin (195 kDa cornified envelope precursor)
            (190 kDa paraneoplastic pemphigus antigen)
          Length = 1756

 Score = 34.3 bits (77), Expect = 0.41
 Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 24/188 (12%)

Query: 95   RVRMSRLQMLTTRFEN-LTMTEDERIS--EYHMRVRDLSNASFALGEPMSD--------E 143
            R  + RLQ   T  E  L   E ER +  E    V+ L     AL +  ++        +
Sbjct: 1386 RAELRRLQRRRTELERQLEELERERQARREAEREVQRLQQRLAALEQEEAEAREKVTHTQ 1445

Query: 144  KLVRKILRSVTSKFAMKVIAIEEAQDISSLKVDELIGSLQTYKLKLG--EKPEKKTKSIA 201
            K+V +       + A+  + +EE Q    L    L G L+T + KL   EK E K K + 
Sbjct: 1446 KVVLQQDPQQAREHALLRLQLEEEQHRRQL----LEGELETLRRKLAALEKAEVKEKVVL 1501

Query: 202  FVSNTTEGDDADSESENLSEALALLARKFNRALRKID---RRTRPNVQDIKSDNSKSYNS 258
              S   E  D + E + L  +L     + +R+ R++D    R    + +++  NSKS   
Sbjct: 1502 SESVQVEKGDTEQEIQRLKSSL----EEESRSKRELDVEVSRLEARLSELEFHNSKSSKE 1557

Query: 259  QRKVKEED 266
               ++EE+
Sbjct: 1558 LDFLREEN 1565


>DR36_ARATH (Q8VZC7) Probable disease resistance protein At5g45510
          Length = 1202

 Score = 34.3 bits (77), Expect = 0.41
 Identities = 46/196 (23%), Positives = 77/196 (38%), Gaps = 19/196 (9%)

Query: 26  AQAEGSTSTPEEKPEDELTSAEEEASLENSKAMNAIFNAVDKNMFRLINTCTVAKDAWEI 85
           A+ E + S   EK ED  T  E+E    + +   +      +     +   T+  D W  
Sbjct: 257 AEGEANDSQSGEKKED--TDGEDEIRSADKEEPESQARVKTEEKHEKVVPPTI-DDLWGS 313

Query: 86  LKTTHEGTTRVRMSRLQMLTTRFENLTMTEDERISEYHMRVRDLSNASFALGEPMSDEKL 145
             T  E T +       +L    E+  + E E +    M  +D+ N  F    P +DEKL
Sbjct: 314 TNTYGEITFQTTNESQDLL----ESFNLKEAEALFTSSMFFKDMPNFFFD-PVPGTDEKL 368

Query: 146 VRKILRSVTS-KFAMKVIAIEEAQDISSLKVDELIGSLQTYKLKLGEKPEKKTKSIAFVS 204
           +  +L+   S   A+ V+A      + S          ++YKL   E+     + I  V 
Sbjct: 369 LNHMLKKSKSLPAAINVLAKSLEYTVKS----------KSYKLNKDEEERLLKEKIEMVL 418

Query: 205 NTTEGDDADSESENLS 220
           +   G+ +D ES + S
Sbjct: 419 SAERGNPSDQESSSES 434


>CUT1_HUMAN (P39880) CCAAT displacement protein (CDP) (Cut-like 1)
          Length = 1505

 Score = 33.5 bits (75), Expect = 0.69
 Identities = 38/202 (18%), Positives = 82/202 (39%), Gaps = 17/202 (8%)

Query: 6   KSIDIKTWKAVVKGWKHPVKAQAEGSTSTPEEKPEDELTSAE---EEASLENSKAMNAIF 62
           + + IK  K  ++ ++  +K QAE      E+K +++    E   +E  +  +  +    
Sbjct: 135 QEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAE 194

Query: 63  NAVDKNMFRLINTCTVAKDAWEILKTTHEGTTRVRMSRLQMLTTRFENLTMTEDERISEY 122
           + V      L  T T   D    LKT ++  T  +   ++M+ T  E      +    E 
Sbjct: 195 HKVQSLQTALEKTRTELFD----LKTKYDEETTAKADEIEMIMTDLERANQRAEVAQREA 250

Query: 123 HMRVRDLSNASFALGEPMSDEKLVRKILRSVTSKFAMKVI---AIEEAQDISSLKVDELI 179
                 LS+A+ +L       +L  +I ++   + A++V+   ++E        ++ +L+
Sbjct: 251 ETLREQLSSANHSL-------QLASQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLV 303

Query: 180 GSLQTYKLKLGEKPEKKTKSIA 201
             +Q  +  L +  E     I+
Sbjct: 304 EDVQRLQASLTKLRENSASQIS 325


>HEPH_HUMAN (Q9BQS7) Hephaestin precursor (EC 1.-.-.-)
           (UNQ2562/PRO6242)
          Length = 1158

 Score = 33.1 bits (74), Expect = 0.90
 Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 15/152 (9%)

Query: 41  DELTSAEEEASLENSKAMNAIFNAVDKNMFRLINTCTVAKDAWEILKTTHEGTTRVRMSR 100
           D  +  +E+ + + S  M+AI   V  N+  L N C   + AW +    +E         
Sbjct: 251 DPASVDKEDETFQESNRMHAINGFVFGNLPEL-NMCAQKRVAWHLFGMGNEIDVHTAFFH 309

Query: 101 LQMLTTRFENLTMTEDERISEYHMRVRDLSNASFALGEPMSDEKLVRKILRSVTSKFAMK 160
            QMLTTR              +H  V ++  A+F   E +  E     I   V S F   
Sbjct: 310 GQMLTTR-------------GHHTDVANIFPATFVTAEMVPWEPGTWLISCQVNSHFRDG 356

Query: 161 VIAIEEAQDIS-SLKVDELIGSLQTYKLKLGE 191
           + A+ + +  S +  VD L G ++ Y ++  E
Sbjct: 357 MQALYKVKSCSMAPPVDLLTGKVRQYFIEAHE 388


>CYL1_BOVIN (P35662) Cylicin I (Multiple-band polypeptide I)
          Length = 667

 Score = 33.1 bits (74), Expect = 0.90
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)

Query: 188 KLGEKPEKKTKSIAFVSNTTEGDDADSESENLSEALALLARKFNRALRKIDRRTRPNVQD 247
           K G+K +KK  +     +T    DADSESE  ++     ++K  + L+K D++ +P ++ 
Sbjct: 448 KKGKKDDKKKDAKKDAVST----DADSESEGDAKKSKKDSKKDKKDLKKDDQK-KPAMKS 502

Query: 248 IKSDNSKSYNSQRKVKEEDKSGQNK 272
            +S  ++S    +KVK + K    K
Sbjct: 503 KESTETESDWESKKVKRDSKKDTKK 527


>YKD1_CAEEL (Q03560) Hypothetical protein B0464.2 in chromosome III
          Length = 1150

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 64/301 (21%), Positives = 126/301 (41%), Gaps = 47/301 (15%)

Query: 13   WKAVVKGWKHPVKAQAEGSTSTPEEKPEDELTSAEEEASLENS--KAMN-AIFNAVDKNM 69
            W A V+ +   +K   + + ST +      L  A   A++ N   +A+  A+ + +D   
Sbjct: 728  WMAAVQMYSSAMKKFRKENDSTLQHY----LAKAYYRANMLNEAKEALECAMLDQLDNTQ 783

Query: 70   FRLINTCTVAKDAWEIL---KTTHEGTTRVRMSRLQMLTTRFENLTMTEDERISEYHMRV 126
             +      + K A E+L   K T E  T   +  L+     F+ ++  +D + S   MR+
Sbjct: 784  LKFNYAIVLKKSAKEVLRGHKMTSEQVTAA-IDDLKFADKIFQYISKNDDRQSSHTGMRI 842

Query: 127  RD-------------LSNASFALGEPMSDEKLVRKIL-RSVTSKFAMKVIAIEEA---QD 169
                           L+ A   L    + ++  R+++ +    K A++   IEEA   ++
Sbjct: 843  SRTICAEEAKNCKDLLTQAKHKLAAAQTQDEEERRLMEKQEKEKIALQNKMIEEARAKEE 902

Query: 170  ISSLKVDEL----IGSLQTYK--LKLGEKPEKKTKSIA-----------FVSNTTEGDDA 212
                K++++    +  ++  K  L+L E  E+K +              FV+++++  + 
Sbjct: 903  AEKQKLEDMKNLRLSFIEMTKDVLRLPEIVEEKRRGGGGRKRRNDDGDEFVNDSSDAGNY 962

Query: 213  DSESENLSEALALLARKFNRALRKIDRRTRPNVQDIKSDNSKSYNSQRKVKEE-DKSGQN 271
            D E E   +      RK ++A +K  R+ R        D+++    +RK KEE D+  Q 
Sbjct: 963  DGE-EGGEDGERRERRKKDKAAKKASRKKRERRDSGGPDSNRRDEKKRKRKEERDRKLQE 1021

Query: 272  K 272
            K
Sbjct: 1022 K 1022


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.310    0.126    0.341 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,994,729
Number of Sequences: 164201
Number of extensions: 1274697
Number of successful extensions: 4626
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 4584
Number of HSP's gapped (non-prelim): 117
length of query: 310
length of database: 59,974,054
effective HSP length: 110
effective length of query: 200
effective length of database: 41,911,944
effective search space: 8382388800
effective search space used: 8382388800
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)