BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0093a.1
(268 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
RPE_SPIOL (Q43157) Ribulose-phosphate 3-epimerase, chloroplast p... 472 e-133
RPE_SOLTU (Q43843) Ribulose-phosphate 3-epimerase, chloroplast p... 458 e-129
RPE_ORYSA (Q9ZTP5) Ribulose-phosphate 3-epimerase, chloroplast p... 434 e-121
RPE_SYNY3 (P74061) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (... 318 9e-87
RPE_BACSU (O34557) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (... 258 1e-68
RPEP_ALCEU (Q04539) Ribulose-phosphate 3-epimerase, plasmid (EC ... 213 4e-55
RPEC_ALCEU (P40117) Ribulose-phosphate 3-epimerase, chromosomal ... 210 3e-54
RPE_SERMA (P45455) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (... 206 5e-53
RPE_HAEIN (P44756) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (... 206 6e-53
RPE_ECOLI (P32661) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (... 201 1e-51
RPE_STRCO (Q9L0Z5) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (... 199 8e-51
RPE_BUCAP (Q8K940) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (... 198 1e-50
RPE_AQUAE (O67098) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (... 198 1e-50
RPE_RHOCA (P51012) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (... 192 7e-49
RPE_BUCAI (P57603) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (... 190 4e-48
RPE_RHORU (P51013) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (... 186 7e-47
RPE_TREPA (O66107) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (... 179 8e-45
RPE_MYCTU (P65760) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (... 178 1e-44
RPE_MYCBO (P65761) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (... 178 1e-44
RPE_HELPJ (Q9ZJ75) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (... 174 2e-43
>RPE_SPIOL (Q43157) Ribulose-phosphate 3-epimerase, chloroplast
precursor (EC 5.1.3.1) (Pentose-5-phosphate 3-epimerase)
(PPE) (RPE) (R5P3E)
Length = 285
Score = 472 bits (1214), Expect = e-133
Identities = 235/251 (93%), Positives = 245/251 (96%)
Query: 18 PRSLTFSRRKISTIVKASSRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHV 77
P SLTF+RRK+ T+VKA+SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHV
Sbjct: 34 PNSLTFTRRKVQTLVKATSRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHV 93
Query: 78 DVMDGRFVPNITIGPLIVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSIHCEQS 137
DVMDGRFVPNITIGPL+VDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVS+HCE +
Sbjct: 94 DVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCELA 153
Query: 138 STIHLHRTVNQVKSLGAKAGVVLNPGTPLSAIEYVLDVVDLVLIMSVNPGFGGQSFIESQ 197
STIHLHRTVNQ+KSLGAKAGVVLNPGTPLS IEYVLDVVDLVLIMSVNPGFGGQSFIESQ
Sbjct: 154 STIHLHRTVNQIKSLGAKAGVVLNPGTPLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQ 213
Query: 198 VKKISDLRRLCAEKGVNPWIEVDGGVTPANAYKVIEAGANALVAGSAVFGAKDYAEAIKG 257
VKKISDLR++C EKGVNPWIEVDGGVTPANAYKVIEAGANALVAGSAVFGAKDYAEAIKG
Sbjct: 214 VKKISDLRKMCVEKGVNPWIEVDGGVTPANAYKVIEAGANALVAGSAVFGAKDYAEAIKG 273
Query: 258 IKTSKRPEPVA 268
IK SKRPEPVA
Sbjct: 274 IKASKRPEPVA 284
>RPE_SOLTU (Q43843) Ribulose-phosphate 3-epimerase, chloroplast
precursor (EC 5.1.3.1) (Pentose-5-phosphate 3-epimerase)
(PPE) (RPE) (R5P3E) (Fragment)
Length = 280
Score = 458 bits (1179), Expect = e-129
Identities = 225/253 (88%), Positives = 244/253 (95%)
Query: 16 NHPRSLTFSRRKISTIVKASSRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWI 75
++P SLTF+RR+I T+V ASSRVDKFSKSDIIVSPSILSANF+KLGEQVKA+E AGCDWI
Sbjct: 27 SNPNSLTFTRRRIQTVVNASSRVDKFSKSDIIVSPSILSANFSKLGEQVKAIEQAGCDWI 86
Query: 76 HVDVMDGRFVPNITIGPLIVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSIHCE 135
HVDVMDGRFVPNITIGPL+VD+LRP+TDLPLDVHLMIVEP+QRVPDFIKAGADIVS+HCE
Sbjct: 87 HVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCE 146
Query: 136 QSSTIHLHRTVNQVKSLGAKAGVVLNPGTPLSAIEYVLDVVDLVLIMSVNPGFGGQSFIE 195
QSSTIHLHRT+NQ+KSLGAKAGVVLNPGTPL+AIEYVLD VDLVLIMSVNPGFGGQSFIE
Sbjct: 147 QSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQSFIE 206
Query: 196 SQVKKISDLRRLCAEKGVNPWIEVDGGVTPANAYKVIEAGANALVAGSAVFGAKDYAEAI 255
SQVKKISDLR++CAE+G+NPWIEVDGGV P NAYKVIEAGANALVAGSAVFGA DYAEAI
Sbjct: 207 SQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAPDYAEAI 266
Query: 256 KGIKTSKRPEPVA 268
KGIKTSKRPE VA
Sbjct: 267 KGIKTSKRPEAVA 279
>RPE_ORYSA (Q9ZTP5) Ribulose-phosphate 3-epimerase, chloroplast
precursor (EC 5.1.3.1) (Pentose-5-phosphate 3-epimerase)
(PPE) (RPE) (R5P3E)
Length = 274
Score = 434 bits (1115), Expect = e-121
Identities = 219/249 (87%), Positives = 234/249 (93%)
Query: 19 RSLTFSRRKISTIVKASSRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVD 78
R L FS + + V+ASSRVDKFSK+DIIVSPSILSANF+KLGEQVKAVE+AGCDWIHVD
Sbjct: 24 RRLAFSSPRKAFRVRASSRVDKFSKNDIIVSPSILSANFSKLGEQVKAVEVAGCDWIHVD 83
Query: 79 VMDGRFVPNITIGPLIVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSIHCEQSS 138
VMDGRFVPNITIGPL+VDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVS+HCEQSS
Sbjct: 84 VMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSS 143
Query: 139 TIHLHRTVNQVKSLGAKAGVVLNPGTPLSAIEYVLDVVDLVLIMSVNPGFGGQSFIESQV 198
TIHLHRTVNQ+KSLGAKAGVVLNP TPL+AI+YVLDVVDLVLIMSVNPGFGGQSFIESQV
Sbjct: 144 TIHLHRTVNQIKSLGAKAGVVLNPATPLTAIDYVLDVVDLVLIMSVNPGFGGQSFIESQV 203
Query: 199 KKISDLRRLCAEKGVNPWIEVDGGVTPANAYKVIEAGANALVAGSAVFGAKDYAEAIKGI 258
KKI++LR+ AEKGVNPWIEVDGGV P NAYKVIEAGANA+VAGSAVFGA DYAEAIKGI
Sbjct: 204 KKIAELRKYVAEKGVNPWIEVDGGVGPKNAYKVIEAGANAIVAGSAVFGAPDYAEAIKGI 263
Query: 259 KTSKRPEPV 267
KTSKRP V
Sbjct: 264 KTSKRPVAV 272
>RPE_SYNY3 (P74061) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
(Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
Length = 229
Score = 318 bits (815), Expect = 9e-87
Identities = 152/222 (68%), Positives = 188/222 (84%)
Query: 45 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDL 104
+I+V+PSILSA+F++LGE++KAV+ AG DWIHVDVMDGRFVPNITIGPLIVDA+RP+T
Sbjct: 3 NIVVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKK 62
Query: 105 PLDVHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGT 164
LDVHLMIVEPE+ V DF KAGADI+S+H E +++ HLHRT+ Q++ LG KAG VLNP T
Sbjct: 63 TLDVHLMIVEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPST 122
Query: 165 PLSAIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVT 224
PL +EYVL V DL+LIMSVNPGFGGQSFI + KI LR++C E+G++PWIEVDGG+
Sbjct: 123 PLDFLEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLK 182
Query: 225 PANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPEP 266
P N ++V+EAGANA+VAGSAVF A +YAEAI G++ SKRPEP
Sbjct: 183 PNNTWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRNSKRPEP 224
>RPE_BACSU (O34557) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
(Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
Length = 217
Score = 258 bits (659), Expect = 1e-68
Identities = 136/218 (62%), Positives = 164/218 (74%), Gaps = 3/218 (1%)
Query: 46 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 105
I V+PSILSA+FA LG ++K VE G D IH+DVMDG FVPNITIGPLIV+A+RPVTDLP
Sbjct: 2 IKVAPSILSADFAALGNEIKDVEKGGADCIHIDVMDGHFVPNITIGPLIVEAVRPVTDLP 61
Query: 106 LDVHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTP 165
LDVHLMI EP++ +P F KAGADI+S+H E + HLHRT+ +K G KAGVVLNP TP
Sbjct: 62 LDVHLMIEEPDRYIPAFAKAGADILSVHAE--ACPHLHRTIQLIKEQGVKAGVVLNPHTP 119
Query: 166 LSAIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNP-WIEVDGGVT 224
+ IE+V D +DLVL+M+VNPGFGGQ FI S + KI +++R+ EKG IEVDGGV
Sbjct: 120 VQVIEHVFDDLDLVLLMTVNPGFGGQKFIHSVLPKIKEVKRMADEKGKKDLLIEVDGGVN 179
Query: 225 PANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSK 262
A VIEAGAN LVAGSAV+G D +AI I+ SK
Sbjct: 180 KETAPLVIEAGANLLVAGSAVYGQSDRKKAISEIRGSK 217
>RPEP_ALCEU (Q04539) Ribulose-phosphate 3-epimerase, plasmid (EC
5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
Length = 241
Score = 213 bits (542), Expect = 4e-55
Identities = 109/221 (49%), Positives = 150/221 (67%), Gaps = 6/221 (2%)
Query: 42 SKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV 101
S+ I ++PSILSA+FA+LGE+V A+E G D +H DVMD +V N+TIGPL+ +A+RP+
Sbjct: 12 SQRAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVSNLTIGPLVCEAIRPL 71
Query: 102 TDLPLDVHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLN 161
+P+DVHLM+ + +P F KAGA+++S H E S H+ RT+ ++ G KAG+VLN
Sbjct: 72 VSIPIDVHLMVEPVDALIPMFAKAGANLISFHPEASR--HVDRTIGLIRDHGCKAGLVLN 129
Query: 162 PGTPLSAIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLR----RLCAEKGVNPWI 217
P TPLS +++ LD +DLVL+MSVNPGFGGQ+FI + K+ R R A G W+
Sbjct: 130 PATPLSWLDHTLDKLDLVLLMSVNPGFGGQAFIPGVLDKVRQARARIDRQVAAGGRPVWL 189
Query: 218 EVDGGVTPANAYKVIEAGANALVAGSAVFGAKDYAEAIKGI 258
E+DGGV N ++ AGA+ VAGSAVFGA D +GI
Sbjct: 190 EIDGGVKADNITEIARAGADTFVAGSAVFGAPDADGGYRGI 230
>RPEC_ALCEU (P40117) Ribulose-phosphate 3-epimerase, chromosomal (EC
5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
Length = 241
Score = 210 bits (534), Expect = 3e-54
Identities = 107/213 (50%), Positives = 145/213 (67%), Gaps = 6/213 (2%)
Query: 42 SKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV 101
S+ I ++PSILSA+FA+LGE+V A+E G D +H DVMD +VPN+TIGPL+ +A+RP+
Sbjct: 12 SQRAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVPNLTIGPLVCEAIRPL 71
Query: 102 TDLPLDVHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLN 161
+P+DVHLM+ + +P F KAGA+I+S H E S H+ RT+ ++ G KAG+VLN
Sbjct: 72 VSIPIDVHLMVEPVDALIPLFAKAGANIISFHPEASR--HVDRTIGLIRDHGCKAGLVLN 129
Query: 162 PGTPLSAIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLR----RLCAEKGVNPWI 217
P TPL +++ LD +DLVL+MSVNPGFGGQ+FI + K+ R R G W+
Sbjct: 130 PATPLGWLDHTLDQLDLVLLMSVNPGFGGQAFIPGVLDKVRQARARIDRQVDAGGRPVWL 189
Query: 218 EVDGGVTPANAYKVIEAGANALVAGSAVFGAKD 250
E+DGGV N + AGA+ VAGSAVFGA D
Sbjct: 190 EIDGGVKADNIAAIARAGADTFVAGSAVFGAPD 222
>RPE_SERMA (P45455) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
(Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
Length = 210
Score = 206 bits (524), Expect = 5e-53
Identities = 104/206 (50%), Positives = 142/206 (68%), Gaps = 3/206 (1%)
Query: 47 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 105
+++PSILSA+FA+LGE V AG D +H DVMD +VPN+TIGP++ +ALR P
Sbjct: 5 LIAPSILSADFARLGEDTANVLAAGGDVVHFDVMDNHYVPNLTIGPMVCEALRNYGITAP 64
Query: 106 LDVHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTP 165
+DVHLM+ ++ VPDF KAGA +S H E S H+ RT+ +K G KAG+V NP TP
Sbjct: 65 IDVHLMVKPVDRIVPDFAKAGASYISFHPEASE--HVDRTIQLIKEHGCKAGLVFNPATP 122
Query: 166 LSAIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVTP 225
LS ++YV+D +D++L+MSVNPGFGGQSFI + K+ +R+L + G + +EVDGGV
Sbjct: 123 LSYLDYVMDKIDVILLMSVNPGFGGQSFIHGTLDKLRQVRKLIDDSGRDIRLEVDGGVKV 182
Query: 226 ANAYKVIEAGANALVAGSAVFGAKDY 251
N ++ AGA+ VAGSA+FG DY
Sbjct: 183 DNIAEIAAAGADMFVAGSAIFGQPDY 208
>RPE_HAEIN (P44756) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
(Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
Length = 224
Score = 206 bits (523), Expect = 6e-53
Identities = 104/215 (48%), Positives = 146/215 (67%), Gaps = 3/215 (1%)
Query: 47 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 105
+++PSILSA+ A+LG+ V+ V AG D IH DVMD +VPN+T GP + ALR P
Sbjct: 5 LIAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDYGITAP 64
Query: 106 LDVHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTP 165
+DVHLM+ ++ +PDF KAGA+ ++ H E S H+ R++ ++ G K+G+V NP P
Sbjct: 65 IDVHLMVKPVDRIIPDFAKAGANYITFHPESSE--HIDRSLQLIRDCGCKSGLVFNPAMP 122
Query: 166 LSAIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVTP 225
LS ++YVLD VD+VL+MSVNPGFGGQSFI + +KK+ R++ E G + +EVDGGV
Sbjct: 123 LSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGGVKV 182
Query: 226 ANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKT 260
N ++ AGA+ VAGSA+FG DY + I I+T
Sbjct: 183 DNIAEIAAAGADMFVAGSAIFGKPDYKQVIDQIRT 217
>RPE_ECOLI (P32661) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
(Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
Length = 225
Score = 201 bits (512), Expect = 1e-51
Identities = 102/215 (47%), Positives = 145/215 (67%), Gaps = 3/215 (1%)
Query: 47 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 105
+++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+++ +LR P
Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64
Query: 106 LDVHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTP 165
+DVHLM+ ++ VPDF AGA I++ H E S H+ RT+ +K G KAG+V NP TP
Sbjct: 65 IDVHLMVKPVDRIVPDFAAAGASIITFHPEASE--HVDRTLQLIKENGCKAGLVFNPATP 122
Query: 166 LSAIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVTP 225
LS ++YV+D +D++L+MSVNPGFGGQSFI + K+ ++RR E G + +EVDGGV
Sbjct: 123 LSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKV 182
Query: 226 ANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKT 260
N ++ AGA+ VAGSA+F DY + I +++
Sbjct: 183 NNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRS 217
>RPE_STRCO (Q9L0Z5) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
(Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
Length = 228
Score = 199 bits (505), Expect = 8e-51
Identities = 97/213 (45%), Positives = 146/213 (68%), Gaps = 4/213 (1%)
Query: 48 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 107
++PSILSA+FA+L ++ KAVE G DW+HVDVMD FVPN+T+G +V++L TD PLD
Sbjct: 5 INPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDTPLD 62
Query: 108 VHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPLS 167
HLMI P++ P +++AGA V+ H E ++ R ++++ GA+A + L P TP+
Sbjct: 63 CHLMIEAPDRWAPQYVEAGAGSVTFHAEAAAAPV--RLAREIRAKGARASMALKPATPVE 120
Query: 168 AIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVTPAN 227
E +L +D++LIM+V PGFGGQ+F++ + KI R L + G+ W++VDGGV+ A
Sbjct: 121 PYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELIKKHGLELWLQVDGGVSAAT 180
Query: 228 AYKVIEAGANALVAGSAVFGAKDYAEAIKGIKT 260
+ +AGA+ VAGSAV+GA D AEA++ ++T
Sbjct: 181 IERCADAGADVFVAGSAVYGASDPAEAVRALRT 213
>RPE_BUCAP (Q8K940) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
(Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
Length = 228
Score = 198 bits (503), Expect = 1e-50
Identities = 101/213 (47%), Positives = 141/213 (65%), Gaps = 3/213 (1%)
Query: 48 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT-DLPL 106
++ SILSA+FA+LGE K AG DWIH DVMD +VPN+T+GP+I+ ALR +P+
Sbjct: 6 LASSILSADFARLGEDTKKAIDAGSDWIHFDVMDNHYVPNLTMGPMILKALRNYNITVPI 65
Query: 107 DVHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPL 166
DVHLM+ + +P F +AGAD ++ H E ST H+ RT+N +K G KAG+ LNP T L
Sbjct: 66 DVHLMVKPVDNLIPQFAEAGADFITFHPE--STDHIDRTLNLIKECGCKAGLALNPATSL 123
Query: 167 SAIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVTPA 226
+ ++YV++ +DL+L+MSVNPGFG QSF+ + K+ ++R+ N +EVDGGV
Sbjct: 124 NFLDYVMEKLDLILLMSVNPGFGNQSFLPTSFNKLREVRKKIELNSSNILLEVDGGVKLE 183
Query: 227 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIK 259
N +V +GAN V GS +FG DY IK I+
Sbjct: 184 NISEVAFSGANVFVIGSGIFGYTDYNVIIKKIR 216
>RPE_AQUAE (O67098) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
(Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
Length = 222
Score = 198 bits (503), Expect = 1e-50
Identities = 99/214 (46%), Positives = 143/214 (66%), Gaps = 2/214 (0%)
Query: 47 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 106
+++PSIL+ ++ +GEQ++A G D +H DVMDG FVPNIT G I+ +R LP+
Sbjct: 3 LLAPSILAGDWWCIGEQIQATIRGGADILHYDVMDGHFVPNITAGYEILSHIRKRASLPI 62
Query: 107 DVHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPL 166
D HLMI P++ +P F++AGA+ +S+H E + H+HRT+ +K LGAKAGVV+NPGT L
Sbjct: 63 DAHLMIENPDKYIPKFVEAGANWISVHIENN--YHIHRTLQLIKELGAKAGVVVNPGTSL 120
Query: 167 SAIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVTPA 226
SAIE L D VL+MSVNPGF GQ FIE ++++ L+ + + IE+DGG+
Sbjct: 121 SAIEEALYYADYVLLMSVNPGFSGQKFIERSIERLRILKEMRDRINPSCLIEIDGGIKEN 180
Query: 227 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKT 260
N +V+ AGA+ +V GS +FGAKD + +K+
Sbjct: 181 NIAEVVRAGADVVVVGSGIFGAKDIEAQTRKLKS 214
>RPE_RHOCA (P51012) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
(Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
Length = 228
Score = 192 bits (488), Expect = 7e-49
Identities = 95/201 (47%), Positives = 135/201 (66%), Gaps = 5/201 (2%)
Query: 46 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 105
I ++PSILSA+FA G +++A+E G DW+HVDVMDG FVPN+T GP V A R
Sbjct: 7 IKIAPSILSADFADFGREIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVAAFRKHVKTV 66
Query: 106 LDVHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTP 165
+DVHLMI + + + +AGAD+++ H E H+HRT+ +++ G K+GV +NPGTP
Sbjct: 67 MDVHLMISPVDAYIDAYAQAGADVLTAHVEAGP--HIHRTLQAIRAAGMKSGVAINPGTP 124
Query: 166 LSAIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVTP 225
AIE+VLD+ D+V +M+VNPGFGGQ +I+ K+ LR + ++ V+ IE+DGG+ P
Sbjct: 125 AEAIEHVLDIADVVCVMTVNPGFGGQKYID-MTAKVRKLRAMIGDRPVH--IEIDGGMDP 181
Query: 226 ANAYKVIEAGANALVAGSAVF 246
A + AGA+ VAGS VF
Sbjct: 182 VTAPLMAAAGADVFVAGSGVF 202
>RPE_BUCAI (P57603) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
(Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
Length = 228
Score = 190 bits (482), Expect = 4e-48
Identities = 96/213 (45%), Positives = 142/213 (66%), Gaps = 3/213 (1%)
Query: 48 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT-DLPL 106
++PSILSA+FA+LGE +K V AG D IH DVMD +VPN+++GP+I+++LR P+
Sbjct: 6 LAPSILSADFARLGEDIKKVIDAGSDLIHFDVMDNHYVPNLSMGPMILESLRNYNITAPI 65
Query: 107 DVHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPL 166
DVHLM+ + +P F KAGA ++ H E +T+H+ RT+N +K G KAG+ NP TPL
Sbjct: 66 DVHLMVKPVDNLIPQFAKAGATFITFHPE--ATLHIERTLNLIKENGCKAGLAFNPATPL 123
Query: 167 SAIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVTPA 226
+ ++Y+L+ +DL+L+MSVNPGFG QSF+ S K+ ++R++ + +EVDGGV
Sbjct: 124 NFLDYILEKLDLILLMSVNPGFGNQSFLPSTFNKLREVRKIIDANFSDILLEVDGGVKLD 183
Query: 227 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIK 259
N + AGAN V GS +F +Y I+ I+
Sbjct: 184 NIADIACAGANVFVMGSGLFKYSNYKLVIEKIR 216
>RPE_RHORU (P51013) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
(Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
Length = 225
Score = 186 bits (471), Expect = 7e-47
Identities = 104/218 (47%), Positives = 141/218 (63%), Gaps = 13/218 (5%)
Query: 46 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 105
I ++PS+LSA+FA + + G D +H DVMD +VPN+T+GPL+ ALRP T LP
Sbjct: 5 IRIAPSLLSADFAISRPRCPSDGRTGADILHFDVMDNHYVPNLTVGPLVCAALRPHTSLP 64
Query: 106 LDVHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTP 165
+DVHLM + + F +AGAD+++ H E S H+HR+V ++ G KAGV LNP +P
Sbjct: 65 IDVHLMTRPVDPLIDSFAEAGADMITFHPEASD--HVHRSVQMIRKRGLKAGVALNPASP 122
Query: 166 LSAIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDL----RRLCAEKGVNPWIEVDG 221
LS ++++L+ +DLVLIMSVNPGFGGQSFI S + KI+ L RR C VDG
Sbjct: 123 LSLLDHILEDLDLVLIMSVNPGFGGQSFIPSALPKIAALANGRRRACRGD------RVDG 176
Query: 222 GVTPANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIK 259
GV PA+A + GA+ LV A+FGA D A+AI I+
Sbjct: 177 GVNPADARALARPGADILVR-LAIFGASDRAKAIASIR 213
>RPE_TREPA (O66107) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
(Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
Length = 218
Score = 179 bits (453), Expect = 8e-45
Identities = 86/199 (43%), Positives = 129/199 (64%), Gaps = 2/199 (1%)
Query: 48 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 107
++PS+LSA+F+ L + +E G W+H+DVMDG FVPN+T G ++ LR T LP D
Sbjct: 7 LAPSLLSADFSALDRALVYLEAHGAQWVHLDVMDGHFVPNLTFGAPVLRCLRSKTHLPFD 66
Query: 108 VHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPLS 167
VHLM+ P + DF++AGAD ++ H E + +H HR ++ ++ G K G+ L P TP++
Sbjct: 67 VHLMVSRPADLIEDFVQAGADFLTFHIE--AEVHAHRLIHAIRGRGVKVGISLVPSTPVA 124
Query: 168 AIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVTPAN 227
A+ VL VDLVL+M+VNPGF GQ I + K+S L ++ E+G + I VDGG+
Sbjct: 125 ALSEVLPFVDLVLVMTVNPGFSGQQMIAHCLSKVSALVQMRTERGYSYMISVDGGIDCRT 184
Query: 228 AYKVIEAGANALVAGSAVF 246
+ ++AGA+ +V+GSA F
Sbjct: 185 LPQALDAGADVIVSGSAFF 203
>RPE_MYCTU (P65760) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
(Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
Length = 229
Score = 178 bits (451), Expect = 1e-44
Identities = 91/213 (42%), Positives = 136/213 (63%), Gaps = 4/213 (1%)
Query: 47 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 106
+++PSIL+A+FA+L ++ AV G DW+HVDVMDG FVPN+TIG +V++L VTD+P+
Sbjct: 9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPM 66
Query: 107 DVHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPL 166
D HLMI P++ P + +AGA V+ H E +T + +++ GAKAG+ + PGTPL
Sbjct: 67 DCHLMIDNPDRWAPPYAEAGAYNVTFHAE--ATDNPVGVARDIRAAGAKAGISVKPGTPL 124
Query: 167 SAIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVTPA 226
+L D +L+MSV PGFGGQ FI + K+ +R++ + +E+DGG+
Sbjct: 125 EPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDD 184
Query: 227 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIK 259
+ EAG + VAGSAV+GA D A A+ ++
Sbjct: 185 TIEQAAEAGVDCFVAGSAVYGADDPAAAVAALR 217
>RPE_MYCBO (P65761) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
(Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
Length = 229
Score = 178 bits (451), Expect = 1e-44
Identities = 91/213 (42%), Positives = 136/213 (63%), Gaps = 4/213 (1%)
Query: 47 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 106
+++PSIL+A+FA+L ++ AV G DW+HVDVMDG FVPN+TIG +V++L VTD+P+
Sbjct: 9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPM 66
Query: 107 DVHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPL 166
D HLMI P++ P + +AGA V+ H E +T + +++ GAKAG+ + PGTPL
Sbjct: 67 DCHLMIDNPDRWAPPYAEAGAYNVTFHAE--ATDNPVGVARDIRAAGAKAGISVKPGTPL 124
Query: 167 SAIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVTPA 226
+L D +L+MSV PGFGGQ FI + K+ +R++ + +E+DGG+
Sbjct: 125 EPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDD 184
Query: 227 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIK 259
+ EAG + VAGSAV+GA D A A+ ++
Sbjct: 185 TIEQAAEAGVDCFVAGSAVYGADDPAAAVAALR 217
>RPE_HELPJ (Q9ZJ75) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
(Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E)
Length = 217
Score = 174 bits (442), Expect = 2e-43
Identities = 90/217 (41%), Positives = 142/217 (64%), Gaps = 4/217 (1%)
Query: 48 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 107
V+PS+LSA+F L +++++V A D++HVDVMDG +VPN+T+GP+I++ + ++ +PLD
Sbjct: 3 VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDGHYVPNLTMGPVILENVTQMSQVPLD 60
Query: 108 VHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPLS 167
VHLM+ V F I+SIH E H HR + +KS G G+VLNP T
Sbjct: 61 VHLMVENASFFVELFAPLNPQIISIHAENEK--HPHRVLQLIKSSGITPGIVLNPHTHEE 118
Query: 168 AIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVTPAN 227
+I+Y+L+ V LVL+MSVNPGFGGQ F++ ++K ++ L + +EVDGGV N
Sbjct: 119 SIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 228 AYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRP 264
+++ +AG + +V+GS +F +KD AI+G++ ++P
Sbjct: 179 IFELQQAGVDVVVSGSYIFESKDRKLAIEGLQNVRQP 215
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.136 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,571,804
Number of Sequences: 164201
Number of extensions: 1252474
Number of successful extensions: 3816
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 3689
Number of HSP's gapped (non-prelim): 96
length of query: 268
length of database: 59,974,054
effective HSP length: 108
effective length of query: 160
effective length of database: 42,240,346
effective search space: 6758455360
effective search space used: 6758455360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Lotus: description of TM0093a.1