BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0091b.9
(742 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TAXB_CHICK (Q9I969) Beta-taxilin (Muscle derived protein 77) 35 0.55
HAA1_YEAST (Q12753) Transcriptional activator HAA1 34 1.6
ZSW3_MOUSE (Q8CFL8) Zinc finger SWIM domain containing protein 3 33 2.1
TRA1_LACHE (P35880) Transposase for insertion sequence element I... 33 2.1
WRK7_ARATH (Q9STX0) Probable WRKY transcription factor 7 (WRKY D... 33 2.7
TRA5_LACLA (P35881) Transposase for insertion sequence element I... 33 2.7
IF2_STRP3 (Q8K644) Translation initiation factor IF-2 33 2.7
WR15_ARATH (O22176) Probable WRKY transcription factor 15 (WRKY ... 33 3.6
OTC_SYNEL (Q8DJW4) Ornithine carbamoyltransferase (EC 2.1.3.3) (... 33 3.6
MECA_STAAW (P60186) Adapter protein mecA 33 3.6
MECA_STAAN (P60185) Adapter protein mecA 33 3.6
MECA_STAAM (P60184) Adapter protein mecA 33 3.6
VIT1_CAEEL (P55155) Vitellogenin 1 precursor 32 4.7
GAG_HV1Z2 (P12495) Gag polyprotein [Contains: Core protein p17 (... 32 4.7
TRA6_BURCE (P24575) Transposase for insertion sequence element I... 32 6.1
PIB4_HUMAN (Q15147) 1-phosphatidylinositol-4,5-bisphosphate phos... 32 6.1
IF2_STRPY (Q99YG1) Translation initiation factor IF-2 32 6.1
IF2_STRP8 (Q8NZU7) Translation initiation factor IF-2 32 6.1
CPV3_PIG (P79304) Cytochrome P450 19 type III (Aromatase) (EC 1.... 32 6.1
ZSW3_HUMAN (Q96MP5) Zinc finger SWIM domain containing protein 3 32 7.9
>TAXB_CHICK (Q9I969) Beta-taxilin (Muscle derived protein 77)
Length = 676
Score = 35.4 bits (80), Expect = 0.55
Identities = 68/329 (20%), Positives = 132/329 (39%), Gaps = 50/329 (15%)
Query: 360 KRDMKRCIRGSHSIQSFEEEWMRIMVEYNLKENEWLQGLYKIRESWIPIYNRSTFFAGMN 419
+R+MK C + E+ I+ +Y L+E E L ++K RE + +
Sbjct: 264 ERNMKLCQENTE----LAEKLKSIIDQYELRE-EHLDKIFKHRELQQKLVDA-------- 310
Query: 420 TTQRSESINAFFDSFVDASTTLQEFVLKFEKAVESRLEAERKENYESRHKSRILSTGSKL 479
+ E + +E++L +A E +L+A+ + E+ +++I +
Sbjct: 311 ---KLEQSQEMMKEAEERHQKEKEYLLN--QAAEWKLQAKMLKEQETVLQAQITLYSERF 365
Query: 480 EEHAASIYTRN-IFAKFKGELEKINRFTRHKIRRDGPKYVYQVSNCYDARDTFTVDIDLD 538
EE ++ N +FA FK E+EK+ + + K+ +D + + NC A +D+ +
Sbjct: 366 EEFQKTLTKSNEVFATFKQEMEKMTKKMK-KLEKDTATWKSRFENCNRA----LLDMIEE 420
Query: 539 SQIAKCGYELYEFMGILCRHILVIFQAKGVVQIPSHFIMERWTKDANRGLEDTYNDNDLG 598
+ YE + +L I + + + + E + K L + N ND+
Sbjct: 421 KAMRTKEYECF---------VLKIQRLENLCRALQEERNELYRKIKQAQLPEEVNGNDIL 471
Query: 599 EKSDTLKILRRVHVQREASFLA---DLAEESEEAYNFIISEMKQTHKSAAAMKTSEGVVL 655
E+ D Q A ++ +E EA+ + +HK+ + S+G
Sbjct: 472 EEDDDANTNPSSSEQASIELCAADKNMLQELAEAF-------RVSHKAEETL-PSDG--- 520
Query: 656 LESSEKNVN-QVCSSEQVSEPPQLTIGNP 683
S+ + N Q+C + V E P P
Sbjct: 521 --SNPETCNVQMCEAISVPELPSHLTSQP 547
>HAA1_YEAST (Q12753) Transcriptional activator HAA1
Length = 694
Score = 33.9 bits (76), Expect = 1.6
Identities = 21/78 (26%), Positives = 38/78 (47%), Gaps = 4/78 (5%)
Query: 419 NTTQRSESINAFFDSFVDAS--TTLQEFVLKFEKAVESRLEAERKENYESRHKSR--ILS 474
N++++ N FD F D+S +TL L ++ + S+ + ++ENY + R + S
Sbjct: 376 NSSRQEHQGNGLFDMFTDSSSISTLSRANLLLQEKIGSQENSVKQENYSKNPQLRHQLTS 435
Query: 475 TGSKLEEHAASIYTRNIF 492
H A+ Y +N F
Sbjct: 436 RSRSFIHHPANEYLKNTF 453
>ZSW3_MOUSE (Q8CFL8) Zinc finger SWIM domain containing protein 3
Length = 695
Score = 33.5 bits (75), Expect = 2.1
Identities = 83/387 (21%), Positives = 134/387 (34%), Gaps = 87/387 (22%)
Query: 29 LEIGMEFESIEKVREFYNSFAKKNGFGVRVRSSKPKRAVLVCCNEG----------QHKV 78
+E+G F++ E +E ++++ K+ VR R + N G Q K
Sbjct: 1 MELGSCFKTYEDFKECFSAYKKETRCSFIVRDCISVRFHNL--NNGTSFREDILYVQVKF 58
Query: 79 KISRTEEIQDSTNQTKRKCSTIRSGCEASLIVSRGTTKSKWMIKSFNNDHNHVMVSPKSV 138
RT+ + T + R C A L++ T + I N H H
Sbjct: 59 VCIRTQSNRKKTRKVDR--------CPAYLLLQYNETLDRLFISELNTQHIHA------- 103
Query: 139 SYMRCHKKMSVAAKSLVEKFEEEGIPTGKVAAIFNDGDSTFTNRDCWNYIRNVR---RKN 195
+ GIP K AI C + + V+ RK+
Sbjct: 104 -----------------DSNASGGIPASKPQAI------------CLHKLPPVQLSIRKD 134
Query: 196 LDVGDAQAVF-DYCKRKQVENSNFFYAIQCDEDSR-----MVNLFWVDARSRLSYQLFGD 249
LD + +V +C K + SN D M N VD S S+ +
Sbjct: 135 LDTAEKPSVEPSFCLDKIHKPSNPEQEGISPSDMAKIAKVMKNFLTVDEGSMASFSVGTS 194
Query: 250 VITFDTTYKTNKYSMPFAPFVG------LNNHSQSILYGCALLQDESEASFVWLFKTLLQ 303
+++++K S FA F + N ILY + E E+ V +
Sbjct: 195 QDLDRLSFQSSKMSDLFARFPETLLLHRVENSQGHILYAFLVENKERESRVVHFAVLKAE 254
Query: 304 -AMGGKKPISIIT--------------DQDLAMKAALAKVFPESRHRLCLWHIIKKFPEK 348
A K ++I T D +A L ++FP +R L ++H + +K
Sbjct: 255 TAPSVAKMLNIFTEFNSDWPKVKMVFVDPSFPHRAILQEIFPSARTLLSIYHTTRLLEKK 314
Query: 349 LAHIYHKQSIFKRDMKRCIRGSHSIQS 375
L H + FKR MK +R + + S
Sbjct: 315 L-HQSSVNASFKRLMKEALREAVFVSS 340
>TRA1_LACHE (P35880) Transposase for insertion sequence element
IS1201
Length = 369
Score = 33.5 bits (75), Expect = 2.1
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 273 NNHSQSILYGCALLQDESEASFVWLFKTLLQAM---GGKKPISIITDQDLAMKAALAKVF 329
N H + I Y A +E VW LLQ+M G ++ ++D + MK ALAK +
Sbjct: 188 NGHKEVIDYCIA----PNENIEVWT--ELLQSMKSRGLEQVELFLSDGVVGMKTALAKTY 241
Query: 330 PESRHRLCLWHIIKKFPEKL 349
P++ + CL H+++ K+
Sbjct: 242 PQAHFQRCLVHVMRNICAKV 261
>WRK7_ARATH (Q9STX0) Probable WRKY transcription factor 7 (WRKY
DNA-binding protein 7)
Length = 353
Score = 33.1 bits (74), Expect = 2.7
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 96 KCSTIRSGCEASLIVSRGTTKSKWMIKSFNNDHNHVMV 133
KCS++R GC A V R + +I ++ DHNH +V
Sbjct: 305 KCSSVR-GCPARKHVERALDDAMMLIVTYEGDHNHALV 341
>TRA5_LACLA (P35881) Transposase for insertion sequence element
IS905
Length = 391
Score = 33.1 bits (74), Expect = 2.7
Identities = 23/117 (19%), Positives = 53/117 (44%), Gaps = 9/117 (7%)
Query: 270 VGLNNHSQSILYGCALLQDESEASFVWLFKTLLQAMGGKKPISIITDQDLAMKAALAKVF 329
+G+ Q + G + +E+ AS+ L L Q G ++ ++TD ++ +++ +
Sbjct: 183 LGITPEGQKAVLGYEIAPNENNASWSTLLDKL-QNQGIQQVSLVVTDGFKGLEQIISQAY 241
Query: 330 PESRHRLCLWHIIKKFPEKLAHIYHKQSIFKRDMKRCIRGSH------SIQSFEEEW 380
P ++ + CL HI + K+ +++ K R + ++++F EW
Sbjct: 242 PLAKQQRCLIHISRNLASKVKRA--DRAVILEQFKTIYRAENLEMAVQALENFIAEW 296
>IF2_STRP3 (Q8K644) Translation initiation factor IF-2
Length = 953
Score = 33.1 bits (74), Expect = 2.7
Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 7/130 (5%)
Query: 609 RVHVQREASFLADLAEESEEAYNFIISEMKQTHKSAAAMKTSEGVVLLESSEKNVNQVCS 668
R Q+EA LA+LA + + + +H+ AA E L+SS +
Sbjct: 234 RFRAQQEAKRLAELARQEAKEAALKAQAEEMSHREAALKSIEEAETKLKSSNISAKSTAD 293
Query: 669 SEQVSEP-PQLTIGNPHVSQTKGRKKDGGKMTQNSRFKSGLEVSLNKSVVKRKACHECGE 727
+ + + P+ H SQ +G+KK+ ++ ++ + NK+ +K G+
Sbjct: 294 NRRKKQARPEKNRELTHHSQ-EGQKKNKKSWNSQNQVRNQKNSNWNKNKKTKK-----GK 347
Query: 728 HGHNSRTCKK 737
+ N+ T K
Sbjct: 348 NAKNTNTAPK 357
>WR15_ARATH (O22176) Probable WRKY transcription factor 15 (WRKY
DNA-binding protein 15)
Length = 317
Score = 32.7 bits (73), Expect = 3.6
Identities = 15/35 (42%), Positives = 20/35 (56%), Gaps = 1/35 (2%)
Query: 96 KCSTIRSGCEASLIVSRGTTKSKWMIKSFNNDHNH 130
KCS++R GC A V R S +I ++ DHNH
Sbjct: 264 KCSSVR-GCPARKHVERAADDSSMLIVTYEGDHNH 297
>OTC_SYNEL (Q8DJW4) Ornithine carbamoyltransferase (EC 2.1.3.3)
(OTCase)
Length = 310
Score = 32.7 bits (73), Expect = 3.6
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 273 NNHSQSILYGCALL----QDESEASFVWLFKTLLQAM---GGKKPISIITDQDLAMKAAL 325
NN + S+L GCALL + S F L + QA GGK ++++TD A K A
Sbjct: 165 NNVAHSLLLGCALLGVNIRVASPPQFAPLADIVAQAKALSGGKSEVAVLTDPQAAAKGAH 224
Query: 326 A 326
A
Sbjct: 225 A 225
>MECA_STAAW (P60186) Adapter protein mecA
Length = 239
Score = 32.7 bits (73), Expect = 3.6
Identities = 48/180 (26%), Positives = 80/180 (43%), Gaps = 19/180 (10%)
Query: 377 EEEWMRIMVEYNLKENEWLQGLYKIRESWIPIYNRSTFFAGMNTTQRSESINAFFDSFVD 436
EE + +M E N +E+ ++G WI ++ F G+ T S+S N + D
Sbjct: 38 EEFFWSMMDEINEEEDFVVEG-----PLWIQVH---AFEKGVEVTI-SKSKNEDMMNMSD 88
Query: 437 ASTTLQEFVLKFEKAVESRLEAERK--ENYESRHKSRILSTGSKLEEHAASIYTRNIFAK 494
T +F + ++ + LE E + E +E R K + + GSK ++ +A TR I K
Sbjct: 89 DDAT-DQFDEQVQELLAQTLEGEDQLEELFEQRTKEKE-AQGSKRQKSSARKNTRTIIVK 146
Query: 495 FKGELEKINRFTRHK--IRRDGPKYVYQVSNCYDARDTFTVDIDLDSQIAKCGY-ELYEF 551
F +LE + + H I + +Y V Y F D +D ++ Y +L EF
Sbjct: 147 F-NDLEDVINYAYHSNPITTEFEDLLYMVDGTYYYAVHF--DSHVDQEVINDSYSQLLEF 203
>MECA_STAAN (P60185) Adapter protein mecA
Length = 239
Score = 32.7 bits (73), Expect = 3.6
Identities = 48/180 (26%), Positives = 80/180 (43%), Gaps = 19/180 (10%)
Query: 377 EEEWMRIMVEYNLKENEWLQGLYKIRESWIPIYNRSTFFAGMNTTQRSESINAFFDSFVD 436
EE + +M E N +E+ ++G WI ++ F G+ T S+S N + D
Sbjct: 38 EEFFWSMMDEINEEEDFVVEG-----PLWIQVH---AFEKGVEVTI-SKSKNEDMMNMSD 88
Query: 437 ASTTLQEFVLKFEKAVESRLEAERK--ENYESRHKSRILSTGSKLEEHAASIYTRNIFAK 494
T +F + ++ + LE E + E +E R K + + GSK ++ +A TR I K
Sbjct: 89 DDAT-DQFDEQVQELLAQTLEGEDQLEELFEQRTKEKE-AQGSKRQKSSARKNTRTIIVK 146
Query: 495 FKGELEKINRFTRHK--IRRDGPKYVYQVSNCYDARDTFTVDIDLDSQIAKCGY-ELYEF 551
F +LE + + H I + +Y V Y F D +D ++ Y +L EF
Sbjct: 147 F-NDLEDVINYAYHSNPITTEFEDLLYMVDGTYYYAVHF--DSHVDQEVINDSYSQLLEF 203
>MECA_STAAM (P60184) Adapter protein mecA
Length = 239
Score = 32.7 bits (73), Expect = 3.6
Identities = 48/180 (26%), Positives = 80/180 (43%), Gaps = 19/180 (10%)
Query: 377 EEEWMRIMVEYNLKENEWLQGLYKIRESWIPIYNRSTFFAGMNTTQRSESINAFFDSFVD 436
EE + +M E N +E+ ++G WI ++ F G+ T S+S N + D
Sbjct: 38 EEFFWSMMDEINEEEDFVVEG-----PLWIQVH---AFEKGVEVTI-SKSKNEDMMNMSD 88
Query: 437 ASTTLQEFVLKFEKAVESRLEAERK--ENYESRHKSRILSTGSKLEEHAASIYTRNIFAK 494
T +F + ++ + LE E + E +E R K + + GSK ++ +A TR I K
Sbjct: 89 DDAT-DQFDEQVQELLAQTLEGEDQLEELFEQRTKEKE-AQGSKRQKSSARKNTRTIIVK 146
Query: 495 FKGELEKINRFTRHK--IRRDGPKYVYQVSNCYDARDTFTVDIDLDSQIAKCGY-ELYEF 551
F +LE + + H I + +Y V Y F D +D ++ Y +L EF
Sbjct: 147 F-NDLEDVINYAYHSNPITTEFEDLLYMVDGTYYYAVHF--DSHVDQEVINDSYSQLLEF 203
>VIT1_CAEEL (P55155) Vitellogenin 1 precursor
Length = 1616
Score = 32.3 bits (72), Expect = 4.7
Identities = 34/145 (23%), Positives = 58/145 (39%), Gaps = 6/145 (4%)
Query: 341 IIKKFPEKLAHIYHKQSIFKRDMKRCIRGSHSIQSFEEEWMRIMVEYNLKENEWLQGLYK 400
+I+ E +A + +++ K D K+ + +S E +V L E E Y
Sbjct: 1366 VIRGEQEIVAQLQNEEIRVKVDGKKILSEDYSAHQIERLGESDIV-IELPEGEVRFDGYT 1424
Query: 401 IRESWIPIYNRSTFFAGMNTTQRSESINAFFDSFVDASTTLQEF----VLKFEKAVESRL 456
I+ +P Y+R G+ ES N F+ S + ++EF +LK E+
Sbjct: 1425 IKTQ-LPSYSRKNQLCGLCGNNDDESTNEFYTSDNTETKDIEEFHRSYLLKNEECEAEEE 1483
Query: 457 EAERKENYESRHKSRILSTGSKLEE 481
K+NY + + S EE
Sbjct: 1484 RLSEKKNYRKYDERKYESEEYSFEE 1508
>GAG_HV1Z2 (P12495) Gag polyprotein [Contains: Core protein p17
(Matrix protein); Core protein p24 (Core antigen); Core
protein p2; Core protein p7 (Nucleocapsid protein); Core
protein p1; Core protein p6]
Length = 500
Score = 32.3 bits (72), Expect = 4.7
Identities = 30/152 (19%), Positives = 56/152 (36%), Gaps = 29/152 (19%)
Query: 619 LADLAEESEEAYNFIISEMKQTHKSAAAMKTSEGVVLLESSEKNVNQVCSSEQVSEPPQL 678
+ D+ + +E + + +T ++ A + +G + +N N C + + PQ
Sbjct: 282 ILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKGWMTETLLVQNANPDCKTILKALGPQA 341
Query: 679 T----------IGNPH-------VSQTKGRKKDGGKMTQNSRFKS----------GLE-- 709
T +G P + ++ M Q FK G E
Sbjct: 342 TLEEMMTACQGVGGPSHKARVLAEAMSQATNSAAAVMMQRGNFKGPRKTIKCFNCGKEGH 401
Query: 710 VSLNKSVVKRKACHECGEHGHNSRTCKKRNQN 741
++ N +RK C +CG+ GH + C +R N
Sbjct: 402 IAKNCRAPRRKGCWKCGKEGHQLKDCTERQAN 433
>TRA6_BURCE (P24575) Transposase for insertion sequence element
IS406
Length = 388
Score = 32.0 bits (71), Expect = 6.1
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 270 VGLNNHSQSILYGCALLQDESEASFVWLFKTLLQAMGGKKPISIITDQDLAMKAALAKVF 329
VG+ + + GC + E+E ++ ++LL A G K II D +KAA V
Sbjct: 187 VGIEASGKRRVLGCEVATSEAEINWRRFLESLL-ARGLKGVTLIIADDHAGLKAARRAVL 245
Query: 330 PESRHRLCLWHI 341
P + C +H+
Sbjct: 246 PSVPWQRCQFHL 257
>PIB4_HUMAN (Q15147) 1-phosphatidylinositol-4,5-bisphosphate
phosphodiesterase beta 4 (EC 3.1.4.11) (Phosphoinositide
phospholipase C) (PLC-beta-4) (Phospholipase C-beta-4)
Length = 1175
Score = 32.0 bits (71), Expect = 6.1
Identities = 37/149 (24%), Positives = 63/149 (41%), Gaps = 12/149 (8%)
Query: 599 EKSDTLKILRRVHVQREASFLADLAEESEEAYNFIISEMKQTHKSAAAMKTSEGVVLL-- 656
EKS KIL + ++ S ++ +E+E + S+ K K A T E ++
Sbjct: 971 EKSTHEKILEKAMKKKGGSNCLEMKKETEIKIQTLTSDHKSKVKEIVAQHTKEWSEMINT 1030
Query: 657 -ESSEKNVNQVCSSEQVSEPPQLTIGNPHVSQTKGRKKDGGKMTQNSR-------FKSGL 708
+ E+ + + S+Q +L I N H QT+ K + ++ R ++
Sbjct: 1031 HSAEEQEIRDLHLSQQCELLKKLLI-NAHEQQTQQLKLSHDRESKEMRAHQAKISMENSK 1089
Query: 709 EVSLNKSVVKRKACHECGEHGHNSRTCKK 737
+S +KS +K KA E NS KK
Sbjct: 1090 AISQDKS-IKNKAERERRVRELNSSNTKK 1117
>IF2_STRPY (Q99YG1) Translation initiation factor IF-2
Length = 953
Score = 32.0 bits (71), Expect = 6.1
Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 7/130 (5%)
Query: 609 RVHVQREASFLADLAEESEEAYNFIISEMKQTHKSAAAMKTSEGVVLLESSEKNVNQVCS 668
R Q+EA LA+LA + + + +H+ AA E L+SS +
Sbjct: 234 RFRAQQEAKRLAELARQEAKEAALKAQAEEMSHREAALKSIEEAETKLKSSNISAKSTAD 293
Query: 669 SEQVSEP-PQLTIGNPHVSQTKGRKKDGGKMTQNSRFKSGLEVSLNKSVVKRKACHECGE 727
+ + + P+ H SQ +G+KK+ ++ ++ + NK+ +K G+
Sbjct: 294 NRRKKQARPEKNRELTHHSQ-EGQKKNKKSWNSQNQVRNQKNSNWNKNKKTKK-----GK 347
Query: 728 HGHNSRTCKK 737
+ N+ T K
Sbjct: 348 NVKNTNTAPK 357
>IF2_STRP8 (Q8NZU7) Translation initiation factor IF-2
Length = 953
Score = 32.0 bits (71), Expect = 6.1
Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 7/130 (5%)
Query: 609 RVHVQREASFLADLAEESEEAYNFIISEMKQTHKSAAAMKTSEGVVLLESSEKNVNQVCS 668
R Q+EA LA+LA + + + +H+ AA E L+SS +
Sbjct: 234 RFRAQQEAKRLAELARQEAKEAALKAQAEEMSHREAALKSIEEAETKLKSSNISAKSTAD 293
Query: 669 SEQVSEP-PQLTIGNPHVSQTKGRKKDGGKMTQNSRFKSGLEVSLNKSVVKRKACHECGE 727
+ + + P+ H SQ +G+KK+ ++ ++ + NK+ +K G+
Sbjct: 294 NRRKKQARPEKNRELTHHSQ-EGQKKNKKSWNSQNQVRNQKNSNWNKNKKTKK-----GK 347
Query: 728 HGHNSRTCKK 737
+ N+ T K
Sbjct: 348 NVKNTNTAPK 357
>CPV3_PIG (P79304) Cytochrome P450 19 type III (Aromatase) (EC
1.14.14.1) (CYPXIXA3) (Estrogen synthetase) (P-450AROM)
Length = 501
Score = 32.0 bits (71), Expect = 6.1
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 447 KFEKAVESRLEAERKENYESRHKSRILSTGSKLEEHAASIYTRNIFAKFKGELEKIN 503
K+EK+V+ +A E RH+ +ST KLE+ + T+ IFA+ +GEL K N
Sbjct: 241 KYEKSVKDLKDAMEILIEEKRHR---ISTAEKLED-SMDFTTQLIFAEKRGELTKEN 293
>ZSW3_HUMAN (Q96MP5) Zinc finger SWIM domain containing protein 3
Length = 696
Score = 31.6 bits (70), Expect = 7.9
Identities = 24/101 (23%), Positives = 44/101 (42%), Gaps = 2/101 (1%)
Query: 269 FVGLNNHSQSILYGCALLQDESEASFVWLFKTLLQAMGGKKPISII-TDQDLAMKAALAK 327
F+ N +S + A+L+ E+ S + + + ++ D +A L +
Sbjct: 237 FLVENKERESRVVHFAVLKAETVTSVAKMLSIFTEFNSDWPKVKVVFVDPSFHYRAILQE 296
Query: 328 VFPESRHRLCLWHIIKKFPEKLAHIYHKQSIFKRDMKRCIR 368
+FP +R L ++H + +KL H FKR MK +R
Sbjct: 297 IFPAARILLSIYHTTRLLEKKL-HRSSANPSFKRLMKEALR 336
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.132 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,671,432
Number of Sequences: 164201
Number of extensions: 3379440
Number of successful extensions: 9232
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 9215
Number of HSP's gapped (non-prelim): 39
length of query: 742
length of database: 59,974,054
effective HSP length: 118
effective length of query: 624
effective length of database: 40,598,336
effective search space: 25333361664
effective search space used: 25333361664
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 70 (31.6 bits)
Lotus: description of TM0091b.9