BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0091b.8
(200 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YB13_METJA (Q58513) Putative glycosyl transferase MJ1113 (EC 2.-... 36 0.067
LSPA_STRCO (Q9S2X7) Lipoprotein signal peptidase (EC 3.4.23.36) ... 35 0.088
SUR4_MOUSE (Q64310) Surfeit locus protein 4 35 0.15
SUR4_HUMAN (O15260) Surfeit locus protein 4 34 0.20
RNFD_HAEIN (Q57288) Electron transport complex protein rnfD 32 0.75
GTR3_CANFA (P47842) Solute carrier family 2, facilitated glucose... 32 1.3
TR46_MACMU (Q645T4) Taste receptor type 2 member 46 (T2R46) 31 2.2
P29K_STRGC (P42361) 29 kDa membrane protein in psaA 5'region (ORF1) 30 2.8
GTR9_HUMAN (Q9NRM0) Solute carrier family 2, facilitated glucose... 30 2.8
Y762_METJA (Q58172) Hypothetical protein MJ0762 30 3.7
Y576_METJA (Q57996) Hypothetical protein MJ0576 30 3.7
SEC3_YEAST (P33332) Exocyst complex component SEC3 (PSL1 protein) 30 3.7
GTR3_SHEEP (P47843) Solute carrier family 2, facilitated glucose... 30 3.7
GTR3_BOVIN (P58352) Solute carrier family 2, facilitated glucose... 30 3.7
MGLC_ECOLI (P23200) Galactoside transport system permease protei... 30 4.8
HPP1_METAC (Q8TJA9) Pyrophosphate-energized proton pump 1 (EC 3.... 30 4.8
OXAA_THEMA (Q9X1H2) Inner membrane protein oxaA 29 6.3
MNTC_LISMO (Q8Y652) Manganese transport system membrane protein ... 29 6.3
MGLC_SALTY (Q56036) Galactoside transport system permease protei... 29 6.3
HPPA_THETN (Q8RCX1) Pyrophosphate-energized proton pump (EC 3.6.... 29 6.3
>YB13_METJA (Q58513) Putative glycosyl transferase MJ1113 (EC
2.-.-.-)
Length = 301
Score = 35.8 bits (81), Expect = 0.067
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 14/93 (15%)
Query: 30 LANHAVNLGVGFGFGASFFGLIAAIAAIYLLVLDRTNWKTNILTGLLIPYIFFSLPSIIF 89
++++ N+ GF G+IA+I+ +L LD N+ T L+ L+ + L +IF
Sbjct: 129 ISSNLTNMLAGFNGLEIGMGVIASISLALVLFLD--NYTTGFLSALIFSASYLGL--LIF 184
Query: 90 N-----VFRGE-----IGKWIALVAIVLRIFIP 112
N VF G+ IG ++A++A+V + +IP
Sbjct: 185 NKYPAKVFPGDVGTLPIGAFLAVLAVVYKEYIP 217
>LSPA_STRCO (Q9S2X7) Lipoprotein signal peptidase (EC 3.4.23.36)
(Prolipoprotein signal peptidase) (Signal peptidase II)
(SPase II)
Length = 204
Score = 35.4 bits (80), Expect = 0.088
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 21/107 (19%)
Query: 36 NLGVGFGFGASFFGLIAAIAAIYLLVLDRTNWKTN-----ILTGLLIPYIFFSLPSIIF- 89
N G FGFG +F + IAA ++V+ R K + I GLL+ +L IF
Sbjct: 93 NAGAAFGFGEAFTIIFTVIAAAVIVVIARLARKLHSLPWAIALGLLLGGALGNLTDRIFR 152
Query: 90 --NVFRGEIGKWIALVAIVLRIFIPKHFPDWLELPAALI---ILIVV 131
VF G + +IA PKHF + +A++ ILIV+
Sbjct: 153 APGVFEGAVVDFIA----------PKHFAVFNLADSAIVCGGILIVI 189
>SUR4_MOUSE (Q64310) Surfeit locus protein 4
Length = 269
Score = 34.7 bits (78), Expect = 0.15
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 43 FGASFFGLIAAIAAIYLLVLDRTNWKTNILTGLLIPYIFFSLPSIIFNVFRGEIGKWIAL 102
F ASFF +I I L++L +KT + L+ ++F ++ FN F W
Sbjct: 175 FDASFFSIIQNIVGTALMILVAIGFKTKLAALTLVVWLF--AINVYFNAF------WTIP 226
Query: 103 VAIVLRIFIPKHFPDWLELPAALIILIVVAPG 134
V + F+ F + + L++++ + PG
Sbjct: 227 VYKPMHDFLKYDFFQTMSVIGGLLLVVALGPG 258
>SUR4_HUMAN (O15260) Surfeit locus protein 4
Length = 269
Score = 34.3 bits (77), Expect = 0.20
Identities = 22/92 (23%), Positives = 42/92 (44%), Gaps = 8/92 (8%)
Query: 43 FGASFFGLIAAIAAIYLLVLDRTNWKTNILTGLLIPYIFFSLPSIIFNVFRGEIGKWIAL 102
F ASFF ++ I L++L +KT + L+ ++F ++ FN F W
Sbjct: 175 FDASFFSIVQNIVGTALMILVAIGFKTKLAALTLVVWLF--AINVYFNAF------WTIP 226
Query: 103 VAIVLRIFIPKHFPDWLELPAALIILIVVAPG 134
V + F+ F + + L++++ + PG
Sbjct: 227 VYKPMHDFLKYDFFQTMSVIGGLLLVVALGPG 258
>RNFD_HAEIN (Q57288) Electron transport complex protein rnfD
Length = 358
Score = 32.3 bits (72), Expect = 0.75
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 100 IALVAIVLRIFIPKHFPDWLELPAALIILIV---VAPGLIANTFRDNIVGVVVCLV 152
+AL A++L + IP + P W+ + L +++ V GL N F ++G V+ L+
Sbjct: 77 VALTALILAMAIPPYAPYWIIIIGTLCAVLLGKQVYGGLGQNPFNPAMIGYVILLI 132
>GTR3_CANFA (P47842) Solute carrier family 2, facilitated glucose
transporter, member 3 (Glucose transporter type 3,
brain)
Length = 495
Score = 31.6 bits (70), Expect = 1.3
Identities = 13/30 (43%), Positives = 18/30 (59%)
Query: 65 TNWKTNILTGLLIPYIFFSLPSIIFNVFRG 94
+NW +N L GLL P F L + +F +F G
Sbjct: 408 SNWTSNFLVGLLFPSAAFYLGAYVFIIFTG 437
>TR46_MACMU (Q645T4) Taste receptor type 2 member 46 (T2R46)
Length = 308
Score = 30.8 bits (68), Expect = 2.2
Identities = 24/105 (22%), Positives = 50/105 (46%), Gaps = 9/105 (8%)
Query: 34 AVNLGVGFGFGASFFGLIAAIAAIYLLVLDRTNWKTNILTGLLIPYIFFSLPSIIFNVFR 93
++ +GV F G G IA + +I + + ++ ILTGL + + L ++ +++
Sbjct: 10 SILVGVIFVIGNFANGFIALVNSIEWVKRQKISFADQILTGLAVSRVGL-LWVLLLHLYA 68
Query: 94 GEIGKWIALVAIVLRI------FIPKHFPDWLELPAALIILIVVA 132
E +A ++ +RI + HF +WL ++ L+ +A
Sbjct: 69 TEFN--LAFYSVEVRITAYNVWIVTNHFSNWLSTSLSMFYLLKIA 111
>P29K_STRGC (P42361) 29 kDa membrane protein in psaA 5'region (ORF1)
Length = 278
Score = 30.4 bits (67), Expect = 2.8
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 37 LGVGFGFGASFFGLIAAIAAIYLLVLDRTNWKTNILTGLLIPYIFFSLPSIIFNVFRGEI 96
LG+ F GA FGL+A+I Y + + K++ G+ F +L I+ +V +
Sbjct: 62 LGINFFIGAITFGLLASIIITY--IKGNSIIKSDTAIGITFS-SFLALGIILISVAKSST 118
Query: 97 GKWIALVAIVLRIFIPKHFPDWLELPAALIILIVVA 132
+ L +L + + W+ + +++L+V++
Sbjct: 119 DLFHILFGNILAV---QDLDMWISIGVGILVLLVIS 151
>GTR9_HUMAN (Q9NRM0) Solute carrier family 2, facilitated glucose
transporter, member 9 (Glucose transporter type 9)
Length = 540
Score = 30.4 bits (67), Expect = 2.8
Identities = 19/55 (34%), Positives = 25/55 (44%), Gaps = 2/55 (3%)
Query: 38 GVGFGFGASFFGLIAAIAAIYLLVLDRTNWKTNILTGLLIPYIFFSLPSIIFNVF 92
G+ F FF AA ++ NW +N GLL P+I SL + F VF
Sbjct: 432 GIPFILTGEFFQQSQRPAAF--IIAGTVNWLSNFAVGLLFPFIQKSLDTYCFLVF 484
>Y762_METJA (Q58172) Hypothetical protein MJ0762
Length = 342
Score = 30.0 bits (66), Expect = 3.7
Identities = 30/104 (28%), Positives = 46/104 (43%), Gaps = 23/104 (22%)
Query: 41 FGFGASFFGLIAAIAA-IYLLVLDR--------TNWKT--NILTGLLI--------PYIF 81
FG+GA FF +A +A IY +L T W I G++ P+I
Sbjct: 178 FGWGAGFFLYLALLAVVIYRFILHHPLPSAMAPTVWINLGPIGAGIVALINMVNNSPFIT 237
Query: 82 FSLPSIIFNVFRGEIGKWIALVAIVLRIFIPKHFPDWLELPAAL 125
P IF+ G W +L+AI++ ++ K L+LP A+
Sbjct: 238 IKEPFYIFSFIFWGFGLWWSLMAIIMTLYYVKK----LKLPYAM 277
>Y576_METJA (Q57996) Hypothetical protein MJ0576
Length = 347
Score = 30.0 bits (66), Expect = 3.7
Identities = 30/104 (28%), Positives = 46/104 (43%), Gaps = 23/104 (22%)
Query: 41 FGFGASFFGLIAAIAA-IYLLVLDR--------TNWKT--NILTGLLI--------PYIF 81
FG+GA FF +A +A IY +L T W I G++ P+I
Sbjct: 185 FGWGAGFFLYLALLAVVIYRFILHHPLPSAMAPTVWINLGPIGAGIVALINMVNNSPFIT 244
Query: 82 FSLPSIIFNVFRGEIGKWIALVAIVLRIFIPKHFPDWLELPAAL 125
P IF+ G W +L+AI++ ++ K L+LP A+
Sbjct: 245 IKEPFYIFSFIFWGFGLWWSLMAIIMTLYYVKK----LKLPYAM 284
>SEC3_YEAST (P33332) Exocyst complex component SEC3 (PSL1 protein)
Length = 1336
Score = 30.0 bits (66), Expect = 3.7
Identities = 23/66 (34%), Positives = 34/66 (50%), Gaps = 3/66 (4%)
Query: 11 EAADLINSDFRDLSLAATKLANH-AVNLGVGFGFGASFFGLIAAIAAIYLLVLDRTNWKT 69
E+ +L+NS FR LS+AAT+ H VN + + + I LLV +NW T
Sbjct: 1114 ESIELMNSSFRKLSIAATRSITHKEVNSSINPNLSDTAALNNDYMETISLLV--NSNWLT 1171
Query: 70 NILTGL 75
+L+ L
Sbjct: 1172 EMLSML 1177
>GTR3_SHEEP (P47843) Solute carrier family 2, facilitated glucose
transporter, member 3 (Glucose transporter type 3,
brain)
Length = 494
Score = 30.0 bits (66), Expect = 3.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 65 TNWKTNILTGLLIPYIFFSLPSIIFNVF 92
+NW +N L GLL P F L + +F VF
Sbjct: 408 SNWTSNFLVGLLFPSATFYLGAYVFIVF 435
>GTR3_BOVIN (P58352) Solute carrier family 2, facilitated glucose
transporter, member 3 (Glucose transporter type 3,
brain)
Length = 494
Score = 30.0 bits (66), Expect = 3.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 65 TNWKTNILTGLLIPYIFFSLPSIIFNVF 92
+NW +N L GLL P F L + +F VF
Sbjct: 408 SNWTSNFLVGLLFPSAAFYLGAYVFIVF 435
>MGLC_ECOLI (P23200) Galactoside transport system permease protein
mglC
Length = 336
Score = 29.6 bits (65), Expect = 4.8
Identities = 20/64 (31%), Positives = 32/64 (49%), Gaps = 14/64 (21%)
Query: 97 GKWIALVAIVLRIFIP------KHFPDWLELPAALIILIVVAPGLIANTFRDNIVGVVVC 150
G+ + L A+V + K FP+ +P AL+ILIV A G ++G++
Sbjct: 73 GRQVGLAAVVAATLLQSMDNANKVFPEMATMPIALVILIVCAIGA--------VIGLING 124
Query: 151 LVIA 154
L+IA
Sbjct: 125 LIIA 128
>HPP1_METAC (Q8TJA9) Pyrophosphate-energized proton pump 1 (EC
3.6.1.1) (Pyrophosphate-energized inorganic
pyrophosphatase 1) (H+-PPase 1) (Membrane-bound
proton-translocating pyrophosphatase 1)
Length = 676
Score = 29.6 bits (65), Expect = 4.8
Identities = 36/169 (21%), Positives = 68/169 (39%), Gaps = 38/169 (22%)
Query: 19 DFRDLSLAATKLANHAVNLGVGFGFGASFFGLIAAIA----AIYLLVLDRTNWKTNILTG 74
+ R ++ + N +G GF G++ +A A A+ L +D N N+ G
Sbjct: 447 EVRQITDTLDAVGNTTAAIGKGFAIGSAALTALALFASYGIAVGLSAIDVMN--PNVFIG 504
Query: 75 L----LIPYIFFSLPSIIFNVFRGEI-----------------------GKWIAL-VAIV 106
L ++PY+F S+ + GE+ GK IA+
Sbjct: 505 LTIGAMLPYLFSSMTILAVGNAAGEVVVEVRRQFREIAGLMEGKADPDYGKCIAISTHSA 564
Query: 107 LRIFIPKHFPDWLELPAALIILIVVAPGLIANTFRDNIV-GVVVCLVIA 154
L+ IP P L + A L++ +V+ PG + ++ G ++ + ++
Sbjct: 565 LKEMIP---PGLLAVIAPLLVGLVLGPGALGGLLAGSVASGFMIAITMS 610
>OXAA_THEMA (Q9X1H2) Inner membrane protein oxaA
Length = 445
Score = 29.3 bits (64), Expect = 6.3
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 42 GFGASFFGLIAAIAAIYLLVL-----DRTNWKTNILTGLLIPYIFFSLPSIIF 89
GF ++ L+ I A Y L RT W+ I+ ++ P++F LPS +F
Sbjct: 356 GFSNNWLFLVITIVASYYTTLLTSQDARTAWQ-GIIMSVIFPFLFVGLPSGLF 407
>MNTC_LISMO (Q8Y652) Manganese transport system membrane protein
mntC
Length = 280
Score = 29.3 bits (64), Expect = 6.3
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 37 LGVGFGFGASFFGLIAAIAAIYLLVLDRTNWKTNILTGLLIPYIFFSLPSIIFNVFRGEI 96
+G+ F GA+ FG+ AA+ + V ++ K + G++ FF+L I+ + +
Sbjct: 60 MGMNFFIGAATFGIAAALGIGF--VNQKSRIKNDTAIGIVFS-AFFALGIILISFAKSST 116
Query: 97 GKWIALVAIVLRIFIPKHFPDWLELPAALIILIVVA 132
+ L VL + + W+ + A+I++ +VA
Sbjct: 117 DLYHILFGNVLAV---RSSDMWMTIIIAIIVISLVA 149
>MGLC_SALTY (Q56036) Galactoside transport system permease protein
mglC
Length = 336
Score = 29.3 bits (64), Expect = 6.3
Identities = 20/64 (31%), Positives = 32/64 (49%), Gaps = 14/64 (21%)
Query: 97 GKWIALVAIVLRIFIP------KHFPDWLELPAALIILIVVAPGLIANTFRDNIVGVVVC 150
G+ + L A+V + K FP+ +P AL+ILIV A G ++G+V
Sbjct: 73 GRQVGLAAVVAATLLQSMENANKVFPEMATMPIALVILIVCAIGA--------VIGLVNG 124
Query: 151 LVIA 154
++IA
Sbjct: 125 IIIA 128
>HPPA_THETN (Q8RCX1) Pyrophosphate-energized proton pump (EC
3.6.1.1) (Pyrophosphate-energized inorganic
pyrophosphatase) (H+-PPase) (Membrane-bound
proton-translocating pyrophosphatase)
Length = 711
Score = 29.3 bits (64), Expect = 6.3
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 29 KLANHAVNLGVGFGFGASFFGLIAAI-AAIYLLVLD 63
+L A +L VGFGFGASF L A + IY D
Sbjct: 170 ELIKEAPSLIVGFGFGASFVALFAQLGGGIYTKAAD 205
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.331 0.147 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,272,774
Number of Sequences: 164201
Number of extensions: 873850
Number of successful extensions: 3164
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 3152
Number of HSP's gapped (non-prelim): 28
length of query: 200
length of database: 59,974,054
effective HSP length: 105
effective length of query: 95
effective length of database: 42,732,949
effective search space: 4059630155
effective search space used: 4059630155
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 63 (28.9 bits)
Lotus: description of TM0091b.8