BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0091a.5
         (140 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

PKN2_CLOAB (Q97IC2) Probable serine/threonine protein kinase CAC...    31  0.96
DPP5_TRISH (Q8J1L4) Dipeptidyl-peptidase V precursor (EC 3.4.14....    30  1.3
DPP5_TRIRU (Q9UW98) Dipeptidyl-peptidase V precursor (EC 3.4.14....    30  1.3
DPP5_ARTBE (Q8J1M3) Dipeptidyl-peptidase V precursor (EC 3.4.14....    30  1.3
ATE1_MOUSE (Q9Z2A5) Arginyl-tRNA--protein transferase 1 (EC 2.3....    29  2.8
YAN2_SCHPO (Q10068) Hypothetical protein C3H1.02c in chromosome I      29  3.6
SM1A_SCHAM (Q26473) Semaphorin 1A precursor (Semaphorin-I) (Sema...    28  4.8
ATE1_HUMAN (O95260) Arginyl-tRNA--protein transferase 1 (EC 2.3....    28  4.8
POLG_HCVJ8 (P26661) Genome polyprotein [Contains: Capsid protein...    28  8.1

>PKN2_CLOAB (Q97IC2) Probable serine/threonine protein kinase
           CAC1728 (EC 2.7.1.37)
          Length = 657

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 29/108 (26%), Positives = 50/108 (45%), Gaps = 16/108 (14%)

Query: 23  NIVHFDGKLQQLKEPVKAWHVLSQNPNHFLCSSESMYVGSPMTPVVPNEELQ-------- 74
           N V+ D +  ++ +P +  +    NPN+ L + ++ Y G P     P EE Q        
Sbjct: 272 NYVNDDEEFTRVMDPAQIQN--ESNPNNKLDNDDTYYNGEPYNKEQPQEEPQEENEEPKN 329

Query: 75  -LNHIYFLVPRSKSRLPLSLEDLCALAIKANAALAHS--SSVFEPSSS 119
            +     L  ++K  L  S   +  + I A +ALA S  S +F+P+S+
Sbjct: 330 KIKGNNMLSGKAKKALVAS---IIVVLILAGSALAFSMGSGIFKPNSN 374


>DPP5_TRISH (Q8J1L4) Dipeptidyl-peptidase V precursor (EC 3.4.14.-)
           (DPP V) (DppV) (Allergen Tri s 4)
          Length = 726

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 27/94 (28%), Positives = 38/94 (39%), Gaps = 5/94 (5%)

Query: 27  FDGKLQQLKEPVK----AWHVLSQNPNHFLCSSESMYVGSPMTPVVPNEELQLNHIYFLV 82
           FDGKL+ L +PVK     +     + ++ L S           P +P   L  ++I FLV
Sbjct: 203 FDGKLKNLVQPVKYAESPYPPFGGSGDYDLSSDGKTVAFMSKAPELPKANLTTSYI-FLV 261

Query: 83  PRSKSRLPLSLEDLCALAIKANAALAHSSSVFEP 116
           P   SR+   +              A SS VF P
Sbjct: 262 PHDGSRVAEPINKRNGPRTPQGIEGASSSPVFSP 295


>DPP5_TRIRU (Q9UW98) Dipeptidyl-peptidase V precursor (EC 3.4.14.-)
           (DPP V) (DppV) (Allergen Tri r 4)
          Length = 726

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 27/94 (28%), Positives = 38/94 (39%), Gaps = 5/94 (5%)

Query: 27  FDGKLQQLKEPVK----AWHVLSQNPNHFLCSSESMYVGSPMTPVVPNEELQLNHIYFLV 82
           FDGKL+ L +PVK     +     + ++ L S           P +P   L  ++I FLV
Sbjct: 203 FDGKLKNLVQPVKYAESPYPPFGGSGDYDLSSDGKTVAFMSKAPELPKANLTTSYI-FLV 261

Query: 83  PRSKSRLPLSLEDLCALAIKANAALAHSSSVFEP 116
           P   SR+   +              A SS VF P
Sbjct: 262 PHDGSRVAEPINKRNGPRTPQGIEGASSSPVFSP 295


>DPP5_ARTBE (Q8J1M3) Dipeptidyl-peptidase V precursor (EC 3.4.14.-)
           (DPP V) (DppV) (Allergen Tri m 4)
          Length = 726

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 27/94 (28%), Positives = 38/94 (39%), Gaps = 5/94 (5%)

Query: 27  FDGKLQQLKEPVK----AWHVLSQNPNHFLCSSESMYVGSPMTPVVPNEELQLNHIYFLV 82
           FDGKL+ L +PVK     +     + ++ L S           P +P   L  ++I FLV
Sbjct: 203 FDGKLKNLVQPVKYAESPYPPFGGSGDYDLSSDGKTVAFMSKAPELPKANLTTSYI-FLV 261

Query: 83  PRSKSRLPLSLEDLCALAIKANAALAHSSSVFEP 116
           P   SR+   +              A SS VF P
Sbjct: 262 PHDGSRVAEPINKRNGPRTPQGIEGASSSPVFSP 295


>ATE1_MOUSE (Q9Z2A5) Arginyl-tRNA--protein transferase 1 (EC
           2.3.2.8) (R-transferase 1) (Arginyltransferase 1)
           (Arginine-tRNA--protein transferase 1)
          Length = 516

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 81  LVPRSKSRLPLSLEDLCALAIKANAALAHSSSVFEPSSSVPQINFK 126
           L+P++KS  P SLEDL   ++  NA  +H   V    SS P   F+
Sbjct: 240 LLPKAKSNQPKSLEDLIFQSLPENA--SHKLEVRVVRSSPPSPQFR 283


>YAN2_SCHPO (Q10068) Hypothetical protein C3H1.02c in chromosome I
          Length = 1036

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 12/98 (12%)

Query: 15  NHGMQSTVNIVHFDGKLQQLKEPVKAWHVL-----SQNPN-HFLCSSESMYV------GS 62
           N+ +Q     +H  G + +L +P+  W+ L      +NPN  FL +    Y+       S
Sbjct: 746 NYMLQHQAIRIHVIGDILKLPQPISTWNKLLDSECHRNPNMEFLSTFSKNYLKPQEFGSS 805

Query: 63  PMTPVVPNEELQLNHIYFLVPRSKSRLPLSLEDLCALA 100
               V+P    + + + F +P   S L  SL  +  +A
Sbjct: 806 SSLTVIPMPSNESSDLVFSIPGITSWLDPSLPVIVLIA 843


>SM1A_SCHAM (Q26473) Semaphorin 1A precursor (Semaphorin-I) (Sema I)
           (Fasciclin IV)
          Length = 730

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 4/66 (6%)

Query: 36  EPVKAWHVLSQNPNHFLCSSESMYVGSPMTPVVPNEELQLNHIYFLVPRSKSRLPLSLED 95
           +PV + H     P         + +G   + V+PN   ++NH    +P S+ +LP+   +
Sbjct: 572 DPVHSIHQAEFEPE----IDNEIVIGVDDSNVIPNTLAEINHAGSKLPSSQEKLPIYTAE 627

Query: 96  LCALAI 101
              +AI
Sbjct: 628 TLTIAI 633


>ATE1_HUMAN (O95260) Arginyl-tRNA--protein transferase 1 (EC
           2.3.2.8) (R-transferase 1) (Arginyltransferase 1)
           (Arginine-tRNA--protein transferase 1)
          Length = 518

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 18/44 (40%), Positives = 23/44 (51%), Gaps = 2/44 (4%)

Query: 83  PRSKSRLPLSLEDLCALAIKANAALAHSSSVFEPSSSVPQINFK 126
           P++KS  P SLEDL   ++  NA  +H   V    SS P   FK
Sbjct: 244 PKAKSNQPKSLEDLIFESLPENA--SHKLEVRVVRSSPPSSQFK 285


>POLG_HCVJ8 (P26661) Genome polyprotein [Contains: Capsid protein C
            (Core protein) (P22); Envelope glycoprotein E1 (GP32)
            (GP35); Envelope glycoprotein E2 (GP68) (GP70) (NS1);
            Protein P7; Nonstructural protein NS2 (P21) (EC
            3.4.22.-); Protease/helicase NS
          Length = 3033

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 13/46 (28%), Positives = 24/46 (51%), Gaps = 1/46 (2%)

Query: 28   DGKLQQLKEPVKAWHVLSQNPNHFLCSSESM-YVGSPMTPVVPNEE 72
            +G+ + +    K+W  +S   +  +C S S  + G+ +TP  P EE
Sbjct: 2416 EGECEVIDSDSKSWSTVSDQEDSVICCSMSYSWTGALITPCGPEEE 2461


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.316    0.130    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,930,874
Number of Sequences: 164201
Number of extensions: 644561
Number of successful extensions: 1397
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1393
Number of HSP's gapped (non-prelim): 10
length of query: 140
length of database: 59,974,054
effective HSP length: 99
effective length of query: 41
effective length of database: 43,718,155
effective search space: 1792444355
effective search space used: 1792444355
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)