Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0082b.2
         (153 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TTC7_HUMAN (Q9ULT0) Tetratricopeptide repeat protein 7A (TPR rep...    66  3e-11
TTC7_MOUSE (Q8BGB2) Tetratricopeptide repeat protein 7A (TPR rep...    66  3e-11
TT7B_HUMAN (Q86TV6) Tetratricopeptide repeat protein 7B (Tetratr...    64  1e-10
Y941_METJA (Q57711) Hypothetical protein MJ0941                        42  4e-04
YG49_SCHPO (O60184) Protein C23E6.09 in chromosome II                  40  0.002
BBS4_MOUSE (Q8C1Z7) Bardet-Biedl syndrome 4 protein homolog            38  0.010
UTY_MOUSE (P79457) Ubiquitously transcribed Y chromosome tetratr...    35  0.064
SSN6_YEAST (P14922) Glucose repression mediator protein                35  0.064
UTY_PANTR (Q6B4Z3) Ubiquitously transcribed Y chromosome tetratr...    34  0.14
BBS4_HUMAN (Q96RK4) Bardet-Biedl syndrome 4 protein                    34  0.14
YE28_METJA (Q58823) Hypothetical protein MJ1428                        33  0.19
UTY_HUMAN (O14607) Ubiquitously transcribed Y chromosome tetratr...    33  0.19
UTX_MOUSE (O70546) Ubiquitously transcribed X chromosome tetratr...    33  0.19
UTX_HUMAN (O15550) Ubiquitously transcribed X chromosome tetratr...    33  0.19
PEX5_PICPA (P33292) Peroxisomal targeting signal receptor (Perox...    33  0.19
OGT1_RAT (P56558) UDP-N-acetylglucosamine--peptide N-acetylgluco...    33  0.19
OGT1_HUMAN (O15294) UDP-N-acetylglucosamine--peptide N-acetylglu...    33  0.19
CC27_YEAST (P38042) Anaphase promoting complex subunit CDC27 (Ce...    33  0.19
CC23_MOUSE (Q8BGZ4) Cell division cycle protein 23 homolog (Anap...    33  0.24
CC23_HUMAN (Q9UJX2) Cell division cycle protein 23 homolog (Anap...    33  0.24

>TTC7_HUMAN (Q9ULT0) Tetratricopeptide repeat protein 7A (TPR repeat
           protein 7)
          Length = 858

 Score = 66.2 bits (160), Expect = 3e-11
 Identities = 40/143 (27%), Positives = 73/143 (50%), Gaps = 2/143 (1%)

Query: 11  EEIWHDLAYAYISLSQWHDAEVCLSKSKAFRQYTASRCHVIGTMHEAKGLYKEAVKAFRD 70
           E+IW   A  ++      +A  C+ ++      + S  ++ G + E KG  +EA + +++
Sbjct: 711 EQIWLQAAELFMEQQHLKEAGFCIQEAAGLFPTSHSVLYMRGRLAEVKGNLEEAKQLYKE 770

Query: 71  ALNIDPRHVPSLISTAVALRRWSNQSDPVVRSFLMDALRYDRLNASAWYNLGILHKAEGR 130
           AL ++P  V  + S  + L R  ++S  + +  L DA+        AW  LG + +A+G+
Sbjct: 771 ALTVNPDGVRIMHSLGLMLSRLGHKS--LAQKVLRDAVERQSTCHEAWQGLGEVLQAQGQ 828

Query: 131 VLEAVECFQAANSLEETAPIEPF 153
              AV+CF  A  LE ++P+ PF
Sbjct: 829 NEAAVDCFLTALELEASSPVLPF 851


>TTC7_MOUSE (Q8BGB2) Tetratricopeptide repeat protein 7A (TPR repeat
           protein 7)
          Length = 858

 Score = 65.9 bits (159), Expect = 3e-11
 Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 2/143 (1%)

Query: 11  EEIWHDLAYAYISLSQWHDAEVCLSKSKAFRQYTASRCHVIGTMHEAKGLYKEAVKAFRD 70
           E+IW   A  ++   Q  +A  C+ ++      + S  ++ G + E KG ++EA + +++
Sbjct: 711 EQIWLQAAELFMEQRQLKEAGFCIQEAAGLFPTSHSVLYMRGRLAEVKGSFEEAKQLYKE 770

Query: 71  ALNIDPRHVPSLISTAVALRRWSNQSDPVVRSFLMDALRYDRLNASAWYNLGILHKAEGR 130
           AL ++P  V  + S  + L +  ++S  + +  L DA+        AW  LG + + +G+
Sbjct: 771 ALTVNPDGVRIMHSLGLMLSQLGHKS--LAQKVLRDAVERQSTFHEAWQGLGEVLQDQGQ 828

Query: 131 VLEAVECFQAANSLEETAPIEPF 153
              AV+CF  A  LE ++P+ PF
Sbjct: 829 NEAAVDCFLTALELEASSPVLPF 851



 Score = 28.5 bits (62), Expect = 6.0
 Identities = 26/109 (23%), Positives = 47/109 (42%), Gaps = 14/109 (12%)

Query: 34  LSKSKAFRQYTASRCHVIGTMHEAKGLYKEAVKAFRDALNIDPRHVPSLISTAVALRRWS 93
           L+  K   QY      ++G +H  +G Y++AV  +  A  ID   V +     + L    
Sbjct: 111 LNNGKLPPQYMCEAMLILGKLHYVEGSYRDAVSMYARA-GIDDISVENKPLYQMRL---- 165

Query: 94  NQSDPVVRSFLMDALRYDRLNASAWYNLGILHKAEGRVLEAVECFQAAN 142
                +  +F++  L  +RL  S   ++ +  + E    E V CF+ A+
Sbjct: 166 -----LSEAFVIKGLSLERLPNSVASHIRLTEREE----EVVACFERAS 205


>TT7B_HUMAN (Q86TV6) Tetratricopeptide repeat protein 7B
           (Tetratricopeptide repeat protein 7 like-1)
          Length = 741

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 2/142 (1%)

Query: 12  EIWHDLAYAYISLSQWHDAEVCLSKSKAFRQYTASRCHVIGTMHEAKGLYKEAVKAFRDA 71
           +IW   A  YI + +  +A  C  ++      + +  ++ G + E +G   EA + + +A
Sbjct: 595 QIWLHAAEVYIGIGKPAEATACTQEAANLFPMSHNVLYMRGQIAELRGSMDEARRWYEEA 654

Query: 72  LNIDPRHVPSLISTAVALRRWSNQSDPVVRSFLMDALRYDRLNASAWYNLGILHKAEGRV 131
           L I P HV S+   A+ L +    S  +    L DA++ +      W  LG + +A+G  
Sbjct: 655 LAISPTHVKSMQRLALILHQLGRYS--LAEKILRDAVQVNSTAHEVWNGLGEVLQAQGND 712

Query: 132 LEAVECFQAANSLEETAPIEPF 153
             A ECF  A  LE ++P  PF
Sbjct: 713 AAATECFLTALELEASSPAVPF 734


>Y941_METJA (Q57711) Hypothetical protein MJ0941
          Length = 338

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 2/84 (2%)

Query: 56  EAKGLYKEAVKAFRDALNIDPRHVPSLISTAVALRRWSNQSDPVVRSFLMDALRYDRLNA 115
           E  G Y E +K + + L   P  VP  +  A  LR+     D ++   L  AL     + 
Sbjct: 142 EFLGEYDELLKCYNEVLTYTPNFVPMWVKKAEILRKLGRYEDALL--CLNRALELKPHDK 199

Query: 116 SAWYNLGILHKAEGRVLEAVECFQ 139
           +A Y  G+L K  G+  EA+ECF+
Sbjct: 200 NALYLKGVLLKRMGKFREALECFK 223



 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 30/140 (21%), Positives = 66/140 (46%), Gaps = 15/140 (10%)

Query: 13  IWHDLAYAYISLSQWHDAEVCLSKSKAFRQYTASRCHVIGTMHEAKGLYKEAVKAFR--- 69
           +W   A     L ++ DA +CL+++   + +  +  ++ G + +  G ++EA++ F+   
Sbjct: 167 MWVKKAEILRKLGRYEDALLCLNRALELKPHDKNALYLKGVLLKRMGKFREALECFKKLI 226

Query: 70  DALNID----PRHVPSLISTAVALRRWSNQSDPVVRSFLMDALRYDRLNASAWYNLGILH 125
           D LN+      RH  SL+     L+            ++   L   + + + WY  G L+
Sbjct: 227 DELNVKWIDAIRHAVSLMLALDDLKD--------AERYINIGLEIRKDDVALWYFKGELY 278

Query: 126 KAEGRVLEAVECFQAANSLE 145
           +  G++ EA++C++    L+
Sbjct: 279 ERLGKLDEALKCYEKVIELQ 298


>YG49_SCHPO (O60184) Protein C23E6.09 in chromosome II
          Length = 1102

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 30/117 (25%), Positives = 60/117 (50%), Gaps = 3/117 (2%)

Query: 34  LSKSKAFRQYTASRCHVIGTMHEAKGLYKEAVKAFRDALNIDPRHVPSLISTAVALRRWS 93
           L+KS       A   ++IG  + A+  Y +A +A++ A+  D R+ P+   +   L    
Sbjct: 573 LTKSLEADDTDAQSWYLIGRCYVAQQKYNKAYEAYQQAVYRDGRN-PTFWCSIGVLYYQI 631

Query: 94  NQSDPVVRSFLMDALRYDRLNASAWYNLGILHKA-EGRVLEAVECFQAANSLEETAP 149
           NQ    + ++   A+R +   +  WY+LG L+++   ++ +A++ +Q A  L+ T P
Sbjct: 632 NQYQDALDAYSR-AIRLNPYISEVWYDLGTLYESCHNQISDALDAYQRAAELDPTNP 687


>BBS4_MOUSE (Q8C1Z7) Bardet-Biedl syndrome 4 protein homolog
          Length = 520

 Score = 37.7 bits (86), Expect = 0.010
 Identities = 29/143 (20%), Positives = 59/143 (40%), Gaps = 6/143 (4%)

Query: 13  IWHDLAYAYISLSQWHDAEVCLSKSKAFRQYTASRCHVIGTMHEAKGLYKEAVKAFRDAL 72
           +W+++   +    ++  A  CL ++     +     + +G +H     Y  A      A+
Sbjct: 272 LWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYASAFHFLSAAI 331

Query: 73  NIDPRHVPSLISTAVALRRWSNQSDPVVRSFLMDALRYDRLNASAWYNLGILHKAEGRVL 132
           N  P+     +  AVAL    +  +   R   ++A+R D+ N     N  +L   +G   
Sbjct: 332 NFQPKMGELYMLLAVALTNLEDIEN--ARRAYVEAVRLDKCNPLVNLNYAVLLYNQGEKK 389

Query: 133 EAVECFQ----AANSLEETAPIE 151
            A+  +Q      N L++ +P+E
Sbjct: 390 SALAQYQEMEKKVNFLKDNSPLE 412



 Score = 32.3 bits (72), Expect = 0.41
 Identities = 31/137 (22%), Positives = 61/137 (43%), Gaps = 11/137 (8%)

Query: 15  HDLAYAYISLSQWHDAEVCLSKS-----KA--FRQYTASRCHVIGTMHEAKGLYKEAVKA 67
           HDL Y  I L + H  +  L K+     KA  F          +G ++   G+Y++A + 
Sbjct: 167 HDLTY--IMLGKIHLLQGDLDKAIEIYKKAVEFSPENTELLTTLGLLYLQLGVYQKAFEH 224

Query: 68  FRDALNIDPRHVPSLISTAVALRRWSNQSDPVVRSFLMDALRYDRLNASAWYNLGILHKA 127
             +AL  DP +  ++++ A ++ +     D  +  + + A      +   W N+G+    
Sbjct: 225 LGNALTYDPANYKAILA-AGSMMQTHGDFDVALTKYRVVACAIPE-SPPLWNNIGMCFFG 282

Query: 128 EGRVLEAVECFQAANSL 144
           + + + A+ C + AN L
Sbjct: 283 KKKYVAAISCLKRANYL 299


>UTY_MOUSE (P79457) Ubiquitously transcribed Y chromosome
           tetratricopeptide repeat protein (Ubiquitously
           transcribed TPR protein ON the Y chromosome)
           (Male-specific histocompatibility antigen H-YDB)
          Length = 1212

 Score = 35.0 bits (79), Expect = 0.064
 Identities = 20/90 (22%), Positives = 50/90 (55%), Gaps = 2/90 (2%)

Query: 49  HVIGTMHEAKGLYKEAVKAFRDALNIDPRHVPSLISTAVALRRWSNQSDPVVRSFLMDAL 108
           + +G  +   G  ++A  ++R +++       +  S  V L +  NQ    +++++  A+
Sbjct: 283 YFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGV-LYQQQNQPMDALQAYIC-AV 340

Query: 109 RYDRLNASAWYNLGILHKAEGRVLEAVECF 138
           + D  +A+AW +LGIL+++  +  +A++C+
Sbjct: 341 QLDHGHAAAWMDLGILYESCNQPQDAIKCY 370


>SSN6_YEAST (P14922) Glucose repression mediator protein
          Length = 966

 Score = 35.0 bits (79), Expect = 0.064
 Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 4/103 (3%)

Query: 51  IGTMHEAKGLYKEAVKAFRDALNIDPRHVPSLISTAVALRRWSNQS--DPV-VRSFLMDA 107
           +G++ E+ G ++ A +A+   L  +  H   ++     L   SN    DP     +L+ +
Sbjct: 230 LGSVLESMGEWQGAKEAYEHVLAQNQHHA-KVLQQLGCLYGMSNVQFYDPQKALDYLLKS 288

Query: 108 LRYDRLNASAWYNLGILHKAEGRVLEAVECFQAANSLEETAPI 150
           L  D  +A+ WY+LG +H        A + FQ A + +   PI
Sbjct: 289 LEADPSDATTWYHLGRVHMIRTDYTAAYDAFQQAVNRDSRNPI 331



 Score = 33.9 bits (76), Expect = 0.14
 Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 6/124 (4%)

Query: 26  QWHDAEVCLS---KSKAFRQYTASRCHVIGTMHEAKGLYKEAVKAFRDALNIDPRHVPSL 82
           Q++D +  L    KS       A+  + +G +H  +  Y  A  AF+ A+N D R+    
Sbjct: 274 QFYDPQKALDYLLKSLEADPSDATTWYHLGRVHMIRTDYTAAYDAFQQAVNRDSRNPIFW 333

Query: 83  ISTAVALRRWSNQSDPVVRSFLMDALRYDRLNASAWYNLGILHK-AEGRVLEAVECFQAA 141
            S  V   + S   D +       A+R +   +  WY+LG L++    ++ +A++ ++ A
Sbjct: 334 CSIGVLYYQISQYRDAL--DAYTRAIRLNPYISEVWYDLGTLYETCNNQLSDALDAYKQA 391

Query: 142 NSLE 145
             L+
Sbjct: 392 ARLD 395



 Score = 30.0 bits (66), Expect = 2.1
 Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 14  WHDLAYAYISLSQWHDAEVCLSKSKAFRQYTASRCHVIGTMHE-AKGLYKEAVKAFRDAL 72
           W  +   Y  +SQ+ DA    +++     Y +   + +GT++E       +A+ A++ A 
Sbjct: 333 WCSIGVLYYQISQYRDALDAYTRAIRLNPYISEVWYDLGTLYETCNNQLSDALDAYKQAA 392

Query: 73  NIDPRHV 79
            +D  +V
Sbjct: 393 RLDVNNV 399


>UTY_PANTR (Q6B4Z3) Ubiquitously transcribed Y chromosome
           tetratricopeptide repeat protein (Ubiquitously
           transcribed TPR protein on the Y chromosome)
          Length = 1079

 Score = 33.9 bits (76), Expect = 0.14
 Identities = 22/105 (20%), Positives = 54/105 (50%), Gaps = 2/105 (1%)

Query: 34  LSKSKAFRQYTASRCHVIGTMHEAKGLYKEAVKAFRDALNIDPRHVPSLISTAVALRRWS 93
           L KS      +    + +G  + + G  ++A  ++R +++       +  S  V L +  
Sbjct: 270 LQKSLEADPNSGQSWYFLGRCYSSIGKVQDAFVSYRQSIDRSEASADTWCSIGV-LYQQQ 328

Query: 94  NQSDPVVRSFLMDALRYDRLNASAWYNLGILHKAEGRVLEAVECF 138
           NQ    +++++  A++ D  +A+AW +LG L+++  +  +A++C+
Sbjct: 329 NQPIDALQAYIC-AVQLDHGHAAAWMDLGTLYESCNQPQDAIKCY 372



 Score = 30.8 bits (68), Expect = 1.2
 Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 17/147 (11%)

Query: 12  EIWHDLAYAYISLSQWHDA----EVCLSKSKAFRQYTASRCHVIGTMHEAKGLYKE---- 63
           EI   +A+ Y +  ++H A    E  L       Q  A+    +G MH    L  +    
Sbjct: 203 EIQFHIAHLYETQRKYHSAKEAYEQLLQTENLPAQVKATVLQQLGWMHHNMDLVGDKATK 262

Query: 64  ---AVKAFRDALNIDPRHVPSLISTAVALRRWSNQSDPVVRSFLMDALRYDRLNASA--W 118
              A+   + +L  DP    S       L R  +    V  +F+      DR  ASA  W
Sbjct: 263 ESYAIPYLQKSLEADPNSGQSWYF----LGRCYSSIGKVQDAFVSYRQSIDRSEASADTW 318

Query: 119 YNLGILHKAEGRVLEAVECFQAANSLE 145
            ++G+L++ + + ++A++ +  A  L+
Sbjct: 319 CSIGVLYQQQNQPIDALQAYICAVQLD 345


>BBS4_HUMAN (Q96RK4) Bardet-Biedl syndrome 4 protein
          Length = 519

 Score = 33.9 bits (76), Expect = 0.14
 Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 11/137 (8%)

Query: 15  HDLAYAYISLSQWHDAEVCLSKS-----KA--FRQYTASRCHVIGTMHEAKGLYKEAVKA 67
           HDL Y  I L + H  E  L K+     KA  F          +G ++   G+Y++A + 
Sbjct: 167 HDLTY--IMLGKIHLLEGDLDKAIEVYKKAVEFSPENTELLTTLGLLYLQLGIYQKAFEH 224

Query: 68  FRDALNIDPRHVPSLISTAVALRRWSNQSDPVVRSFLMDALRYDRLNASAWYNLGILHKA 127
             +AL  DP +  ++++ A ++ +     D  +  + + A      +   W N+G+    
Sbjct: 225 LGNALTYDPTNYKAILA-AGSMMQTHGDFDVALTKYRVVACAVPE-SPPLWNNIGMCFFG 282

Query: 128 EGRVLEAVECFQAANSL 144
           + + + A+ C + AN L
Sbjct: 283 KKKYVAAISCLKRANYL 299



 Score = 31.6 bits (70), Expect = 0.71
 Identities = 28/118 (23%), Positives = 51/118 (42%), Gaps = 3/118 (2%)

Query: 12  EIWHDLAYAYISLSQWHDAEVCLSKSKAFRQYTASRCHVIGTMHEAKGLYKEAVKAFRDA 71
           EI H+L   YI L Q++ A+  L  +    ++  +   ++G +H  +G   +A++ ++ A
Sbjct: 136 EISHNLGVCYIYLKQFNKAQDQLHNALNLNRHDLTYI-MLGKIHLLEGDLDKAIEVYKKA 194

Query: 72  LNIDPRHVPSLISTAVALRRWSNQSDPVVRSFLMDALRYDRLNASAWYNLGILHKAEG 129
           +   P +   L  T + L              L +AL YD  N  A    G + +  G
Sbjct: 195 VEFSPENTELL--TTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAILAAGSMMQTHG 250



 Score = 30.8 bits (68), Expect = 1.2
 Identities = 23/127 (18%), Positives = 49/127 (38%), Gaps = 2/127 (1%)

Query: 13  IWHDLAYAYISLSQWHDAEVCLSKSKAFRQYTASRCHVIGTMHEAKGLYKEAVKAFRDAL 72
           +W+++   +    ++  A  CL ++     +     + +G +H     Y  A      A+
Sbjct: 272 LWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYASAFHFLSAAI 331

Query: 73  NIDPRHVPSLISTAVALRRWSNQSDPVVRSFLMDALRYDRLNASAWYNLGILHKAEGRVL 132
           N  P+     +  AVAL    +  +   +    +A+  D+ N     N  +L   +G   
Sbjct: 332 NFQPKMGELYMLLAVALTNLEDTEN--AKRAYAEAVHLDKCNPLVNLNYAVLLYNQGEKK 389

Query: 133 EAVECFQ 139
            A+  +Q
Sbjct: 390 NALAQYQ 396


>YE28_METJA (Q58823) Hypothetical protein MJ1428
          Length = 567

 Score = 33.5 bits (75), Expect = 0.19
 Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 1/55 (1%)

Query: 49  HVIGTMHEAKGLYKEAVKAFRDALNIDPRHVPSLISTAVALRRWSNQSDPVVRSF 103
           +V G ++   G YK+A ++F +AL ++P+ + +L S A+ L + S + D  + ++
Sbjct: 383 YVKGYIYYKLGNYKDAYESFMNALRVNPKDISTLKSLAIVLEK-SGKIDEAITTY 436


>UTY_HUMAN (O14607) Ubiquitously transcribed Y chromosome
           tetratricopeptide repeat protein (Ubiquitously
           transcribed TPR protein on the Y chromosome)
          Length = 1347

 Score = 33.5 bits (75), Expect = 0.19
 Identities = 22/105 (20%), Positives = 54/105 (50%), Gaps = 2/105 (1%)

Query: 34  LSKSKAFRQYTASRCHVIGTMHEAKGLYKEAVKAFRDALNIDPRHVPSLISTAVALRRWS 93
           L KS      +    + +G  + + G  ++A  ++R +++       +  S  V L +  
Sbjct: 270 LQKSLEADPNSGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGV-LYQQQ 328

Query: 94  NQSDPVVRSFLMDALRYDRLNASAWYNLGILHKAEGRVLEAVECF 138
           NQ    +++++  A++ D  +A+AW +LG L+++  +  +A++C+
Sbjct: 329 NQPMDALQAYIC-AVQLDHGHAAAWMDLGTLYESCNQPQDAIKCY 372



 Score = 30.8 bits (68), Expect = 1.2
 Identities = 33/147 (22%), Positives = 62/147 (41%), Gaps = 17/147 (11%)

Query: 12  EIWHDLAYAYISLSQWHDA----EVCLSKSKAFRQYTASRCHVIGTMHEAKGLYKE---- 63
           EI   +A+ Y +  ++H A    E  L       Q  A+    +G MH    L  +    
Sbjct: 203 EIQFHIAHLYETQRKYHSAKEAYEQLLQTENLPAQVKATVLQQLGWMHHNMDLVGDKATK 262

Query: 64  ---AVKAFRDALNIDPRHVPSLISTAVALRRWSNQSDPVVRSFLMDALRYDRLNASA--W 118
              A++  + +L  DP    S       L R  +    V  +F+      D+  ASA  W
Sbjct: 263 ESYAIQYLQKSLEADPNSGQSWYF----LGRCYSSIGKVQDAFISYRQSIDKSEASADTW 318

Query: 119 YNLGILHKAEGRVLEAVECFQAANSLE 145
            ++G+L++ + + ++A++ +  A  L+
Sbjct: 319 CSIGVLYQQQNQPMDALQAYICAVQLD 345


>UTX_MOUSE (O70546) Ubiquitously transcribed X chromosome
           tetratricopeptide repeat protein (Ubiquitously
           transcribed TPR protein on the X chromosome) (Fragment)
          Length = 1333

 Score = 33.5 bits (75), Expect = 0.19
 Identities = 22/105 (20%), Positives = 54/105 (50%), Gaps = 2/105 (1%)

Query: 34  LSKSKAFRQYTASRCHVIGTMHEAKGLYKEAVKAFRDALNIDPRHVPSLISTAVALRRWS 93
           L KS      +    + +G  + + G  ++A  ++R +++       +  S  V L +  
Sbjct: 207 LQKSLEADPNSGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGV-LYQQQ 265

Query: 94  NQSDPVVRSFLMDALRYDRLNASAWYNLGILHKAEGRVLEAVECF 138
           NQ    +++++  A++ D  +A+AW +LG L+++  +  +A++C+
Sbjct: 266 NQPMDALQAYIC-AVQLDHGHAAAWMDLGTLYESCNQPQDAIKCY 309



 Score = 32.0 bits (71), Expect = 0.54
 Identities = 33/147 (22%), Positives = 62/147 (41%), Gaps = 17/147 (11%)

Query: 12  EIWHDLAYAYISLSQWHDA----EVCLSKSKAFRQYTASRCHVIGTMHEAKGLYKE---- 63
           EI   +A+ Y +  ++H A    E  L       Q  A+    +G MH    L  +    
Sbjct: 140 EIQFHIAHLYETQRKYHSAKEAYEQLLQTENLSAQVKATILQQLGWMHHTVDLLGDKATK 199

Query: 64  ---AVKAFRDALNIDPRHVPSLISTAVALRRWSNQSDPVVRSFLMDALRYDRLNASA--W 118
              A++  + +L  DP    S       L R  +    V  +F+      D+  ASA  W
Sbjct: 200 ESYAIQYLQKSLEADPNSGQSWYF----LGRCYSSIGKVQDAFISYRQSIDKSEASADTW 255

Query: 119 YNLGILHKAEGRVLEAVECFQAANSLE 145
            ++G+L++ + + ++A++ +  A  L+
Sbjct: 256 CSIGVLYQQQNQPMDALQAYICAVQLD 282


>UTX_HUMAN (O15550) Ubiquitously transcribed X chromosome
           tetratricopeptide repeat protein (Ubiquitously
           transcribed TPR protein on the X chromosome)
          Length = 1401

 Score = 33.5 bits (75), Expect = 0.19
 Identities = 22/105 (20%), Positives = 54/105 (50%), Gaps = 2/105 (1%)

Query: 34  LSKSKAFRQYTASRCHVIGTMHEAKGLYKEAVKAFRDALNIDPRHVPSLISTAVALRRWS 93
           L KS      +    + +G  + + G  ++A  ++R +++       +  S  V L +  
Sbjct: 273 LQKSLEADPNSGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGV-LYQQQ 331

Query: 94  NQSDPVVRSFLMDALRYDRLNASAWYNLGILHKAEGRVLEAVECF 138
           NQ    +++++  A++ D  +A+AW +LG L+++  +  +A++C+
Sbjct: 332 NQPMDALQAYIC-AVQLDHGHAAAWMDLGTLYESCNQPQDAIKCY 375



 Score = 32.0 bits (71), Expect = 0.54
 Identities = 33/147 (22%), Positives = 62/147 (41%), Gaps = 17/147 (11%)

Query: 12  EIWHDLAYAYISLSQWHDA----EVCLSKSKAFRQYTASRCHVIGTMHEAKGLYKE---- 63
           EI   +A+ Y +  ++H A    E  L       Q  A+    +G MH    L  +    
Sbjct: 206 EIQFHIAHLYETQRKYHSAKEAYEQLLQTENLSAQVKATVLQQLGWMHHTVDLLGDKATK 265

Query: 64  ---AVKAFRDALNIDPRHVPSLISTAVALRRWSNQSDPVVRSFLMDALRYDRLNASA--W 118
              A++  + +L  DP    S       L R  +    V  +F+      D+  ASA  W
Sbjct: 266 ESYAIQYLQKSLEADPNSGQSWYF----LGRCYSSIGKVQDAFISYRQSIDKSEASADTW 321

Query: 119 YNLGILHKAEGRVLEAVECFQAANSLE 145
            ++G+L++ + + ++A++ +  A  L+
Sbjct: 322 CSIGVLYQQQNQPMDALQAYICAVQLD 348


>PEX5_PICPA (P33292) Peroxisomal targeting signal receptor
           (Peroxisomal protein PAS8) (Peroxin-5) (PTS1 receptor)
          Length = 576

 Score = 33.5 bits (75), Expect = 0.19
 Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 23/143 (16%)

Query: 7   RNLEEEIWHDLAYAYISLSQWHDAEVCLSKSKAFRQYTASRCHVIGTMHEAKGLYK---- 62
           +N  E++W D+  +Y  +   +D +      K F QY   R +     +E K  ++    
Sbjct: 221 QNTFEQVWDDIQVSYADVELTND-QFQAQWEKDFAQYAEGRLNYGEYKYEEKNQFRNDPD 279

Query: 63  ----------------EAVKAFRDALNIDPRHVPSLISTAVALRRWSNQSDPVVRSFLMD 106
                           EA  AF  A+  DP+HV + +       +   +SD +  + L  
Sbjct: 280 AYEIGMRLMESGAKLSEAGLAFEAAVQQDPKHVDAWLKLGEVQTQNEKESDGI--AALEK 337

Query: 107 ALRYDRLNASAWYNLGILHKAEG 129
            L  D  N +A   L I +  +G
Sbjct: 338 CLELDPTNLAALMTLAISYINDG 360



 Score = 30.0 bits (66), Expect = 2.1
 Identities = 24/101 (23%), Positives = 45/101 (43%), Gaps = 2/101 (1%)

Query: 51  IGTMHEAKGLYKEAVKAFRDALNIDPRHVPSLISTAVALRRWSNQSDPVVRSFLMDALRY 110
           +G +  +   + + +  F+ A+ ++P    +      AL  + N+ +  V ++   AL+ 
Sbjct: 428 LGVLFYSMEEFDKTIDCFKAAIEVEPDKALNWNRLGAALANY-NKPEEAVEAYSR-ALQL 485

Query: 111 DRLNASAWYNLGILHKAEGRVLEAVECFQAANSLEETAPIE 151
           +     A YNLG+     GR  EAVE      SL E   ++
Sbjct: 486 NPNFVRARYNLGVSFINMGRYKEAVEHLLTGISLHEVEGVD 526


>OGT1_RAT (P56558) UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit (EC
           2.4.1.-) (O-GlcNAc transferase p110 subunit)
          Length = 1036

 Score = 33.5 bits (75), Expect = 0.19
 Identities = 25/115 (21%), Positives = 53/115 (45%), Gaps = 9/115 (7%)

Query: 38  KAFRQYTASRCHVIGTMHEAKGLYKEAVKAFRDALNIDPRHVPSLISTAVALRRWSNQSD 97
           + F ++ A+  ++   + + +G  +EA+  +++A+ I P    +  +    L+   +   
Sbjct: 345 EVFPEFAAAHSNLASVLQQ-QGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQD--- 400

Query: 98  PVVRSFLMDALRYDRLN---ASAWYNLGILHKAEGRVLEAVECFQAANSLEETAP 149
             V+  L    R  ++N   A A  NL  +HK  G + EA+  ++ A  L+   P
Sbjct: 401 --VQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFP 453



 Score = 32.7 bits (73), Expect = 0.32
 Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 2/113 (1%)

Query: 29  DAEVCLSKSKAFRQYTASRCHVIGTMHEAKGLYKEAVKAFRDALNIDPRHVPSLISTAVA 88
           +AE C + +       A   + +  +   +G  +EAV+ +R AL + P    +  + A  
Sbjct: 301 EAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 360

Query: 89  LRRWSNQSDPVVRSFLMDALRYDRLNASAWYNLGILHKAEGRVLEAVECFQAA 141
           L++     + ++     +A+R     A A+ N+G   K    V  A++C+  A
Sbjct: 361 LQQQGKLQEALMH--YKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRA 411



 Score = 31.6 bits (70), Expect = 0.71
 Identities = 30/134 (22%), Positives = 59/134 (43%), Gaps = 2/134 (1%)

Query: 16  DLAYAYISLSQWHDAEVCLSKSKAFRQYTASRCHVIGTMHEAKGLYKEAVKAFRDALNID 75
           DL     +L +  +A+ C  K+   +   A     +G +  A+G    A+  F  A+ +D
Sbjct: 152 DLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLD 211

Query: 76  PRHVPSLISTAVALRRWSNQSDPVVRSFLMDALRYDRLNASAWYNLGILHKAEGRVLEAV 135
           P  + + I+    L+  +   D  V ++L  AL     +A    NL  ++  +G +  A+
Sbjct: 212 PNFLDAYINLGNVLKE-ARIFDRAVAAYLR-ALSLSPNHAVVHGNLACVYYEQGLIDLAI 269

Query: 136 ECFQAANSLEETAP 149
           + ++ A  L+   P
Sbjct: 270 DTYRRAIELQPHFP 283



 Score = 28.5 bits (62), Expect = 6.0
 Identities = 14/39 (35%), Positives = 26/39 (65%)

Query: 107 ALRYDRLNASAWYNLGILHKAEGRVLEAVECFQAANSLE 145
           A++ + L A A+ NLG ++K  G++ EA+E ++ A  L+
Sbjct: 71  AIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLK 109


>OGT1_HUMAN (O15294) UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit (EC
           2.4.1.-) (O-GlcNAc transferase p110 subunit)
          Length = 1036

 Score = 33.5 bits (75), Expect = 0.19
 Identities = 25/115 (21%), Positives = 53/115 (45%), Gaps = 9/115 (7%)

Query: 38  KAFRQYTASRCHVIGTMHEAKGLYKEAVKAFRDALNIDPRHVPSLISTAVALRRWSNQSD 97
           + F ++ A+  ++   + + +G  +EA+  +++A+ I P    +  +    L+   +   
Sbjct: 345 EVFPEFAAAHSNLASVLQQ-QGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQD--- 400

Query: 98  PVVRSFLMDALRYDRLN---ASAWYNLGILHKAEGRVLEAVECFQAANSLEETAP 149
             V+  L    R  ++N   A A  NL  +HK  G + EA+  ++ A  L+   P
Sbjct: 401 --VQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFP 453



 Score = 32.7 bits (73), Expect = 0.32
 Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 2/113 (1%)

Query: 29  DAEVCLSKSKAFRQYTASRCHVIGTMHEAKGLYKEAVKAFRDALNIDPRHVPSLISTAVA 88
           +AE C + +       A   + +  +   +G  +EAV+ +R AL + P    +  + A  
Sbjct: 301 EAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 360

Query: 89  LRRWSNQSDPVVRSFLMDALRYDRLNASAWYNLGILHKAEGRVLEAVECFQAA 141
           L++     + ++     +A+R     A A+ N+G   K    V  A++C+  A
Sbjct: 361 LQQQGKLQEALMH--YKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRA 411



 Score = 31.6 bits (70), Expect = 0.71
 Identities = 30/134 (22%), Positives = 59/134 (43%), Gaps = 2/134 (1%)

Query: 16  DLAYAYISLSQWHDAEVCLSKSKAFRQYTASRCHVIGTMHEAKGLYKEAVKAFRDALNID 75
           DL     +L +  +A+ C  K+   +   A     +G +  A+G    A+  F  A+ +D
Sbjct: 152 DLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLD 211

Query: 76  PRHVPSLISTAVALRRWSNQSDPVVRSFLMDALRYDRLNASAWYNLGILHKAEGRVLEAV 135
           P  + + I+    L+  +   D  V ++L  AL     +A    NL  ++  +G +  A+
Sbjct: 212 PNFLDAYINLGNVLKE-ARIFDRAVAAYLR-ALSLSPNHAVVHGNLACVYYEQGLIDLAI 269

Query: 136 ECFQAANSLEETAP 149
           + ++ A  L+   P
Sbjct: 270 DTYRRAIELQPHFP 283



 Score = 28.5 bits (62), Expect = 6.0
 Identities = 14/39 (35%), Positives = 26/39 (65%)

Query: 107 ALRYDRLNASAWYNLGILHKAEGRVLEAVECFQAANSLE 145
           A++ + L A A+ NLG ++K  G++ EA+E ++ A  L+
Sbjct: 71  AIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLK 109


>CC27_YEAST (P38042) Anaphase promoting complex subunit CDC27 (Cell
           division control protein 27) (Anaphase promoting complex
           subunit 3)
          Length = 758

 Score = 33.5 bits (75), Expect = 0.19
 Identities = 26/94 (27%), Positives = 41/94 (42%), Gaps = 2/94 (2%)

Query: 51  IGTMHEAKGLYKEAVKAFRDALNIDPRHVPSLISTAVALRRWSNQSDPVVRSFLMDALRY 110
           IG +   +  +  A+KAF  A  +DP    +   T       SN S    ++    AL  
Sbjct: 546 IGNLLSLQKDHDAAIKAFEKATQLDPNF--AYAYTLQGHEHSSNDSSDSAKTCYRKALAC 603

Query: 111 DRLNASAWYNLGILHKAEGRVLEAVECFQAANSL 144
           D  + +A+Y LG      G+  EA+  F+ A S+
Sbjct: 604 DPQHYNAYYGLGTSAMKLGQYEEALLYFEKARSI 637


>CC23_MOUSE (Q8BGZ4) Cell division cycle protein 23 homolog
           (Anaphase promoting complex subunit 8) (APC8) (Cyclosome
           subunit 8)
          Length = 597

 Score = 33.1 bits (74), Expect = 0.24
 Identities = 19/81 (23%), Positives = 36/81 (43%), Gaps = 2/81 (2%)

Query: 42  QYTASRCHVIGTMHEAKGLYKEAVKAFRDALNIDPRHVPSLISTAVALRRWSNQSDPVVR 101
           +Y    C VIG  +  +  +++A   F+ AL ++PR++ +            N S  +  
Sbjct: 328 KYRVETCCVIGNYYSLRSQHEKAALYFQRALKLNPRYLGAWTLMGHEYMEMKNTSAAI-- 385

Query: 102 SFLMDALRYDRLNASAWYNLG 122
                A+  ++ +  AWY LG
Sbjct: 386 QAYRHAIEVNKRDYRAWYGLG 406


>CC23_HUMAN (Q9UJX2) Cell division cycle protein 23 homolog
           (Anaphase promoting complex subunit 8) (APC8) (Cyclosome
           subunit 8)
          Length = 591

 Score = 33.1 bits (74), Expect = 0.24
 Identities = 19/81 (23%), Positives = 36/81 (43%), Gaps = 2/81 (2%)

Query: 42  QYTASRCHVIGTMHEAKGLYKEAVKAFRDALNIDPRHVPSLISTAVALRRWSNQSDPVVR 101
           +Y    C VIG  +  +  +++A   F+ AL ++PR++ +            N S  +  
Sbjct: 322 KYRVETCCVIGNYYSLRSQHEKAALYFQRALKLNPRYLGAWTLMGHEYMEMKNTSAAI-- 379

Query: 102 SFLMDALRYDRLNASAWYNLG 122
                A+  ++ +  AWY LG
Sbjct: 380 QAYRHAIEVNKRDYRAWYGLG 400


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.321    0.133    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,791,715
Number of Sequences: 164201
Number of extensions: 583013
Number of successful extensions: 1669
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1564
Number of HSP's gapped (non-prelim): 126
length of query: 153
length of database: 59,974,054
effective HSP length: 101
effective length of query: 52
effective length of database: 43,389,753
effective search space: 2256267156
effective search space used: 2256267156
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)


Lotus: description of TM0082b.2