BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0082a.8
(876 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
LIP_RHIMI (P19515) Lipase precursor (EC 3.1.1.3) (Triacylglycero... 57 3e-07
LIP_THELA (O59952) Lipase precursor (EC 3.1.1.3) (Triacylglycero... 52 7e-06
LIP_RHIOR (P61872) Lipase precursor (EC 3.1.1.3) (Triacylglycero... 52 7e-06
FAEA_ASPAW (Q9P979) Feruloyl esterase A precursor (EC 3.1.1.73) ... 51 2e-05
RSG5_HUMAN (O43374) Ras GTPase-activating protein 4 (RasGAP-acti... 46 5e-04
FAEA_ASPTU (O42815) Feruloyl esterase A precursor (EC 3.1.1.73) ... 44 0.002
IFR1_HUMAN (O00458) Interferon-related developmental regulator 1... 42 0.009
PERF_RAT (P35763) Perforin 1 precursor (P1) (Lymphocyte pore for... 39 0.046
YMH2_YEAST (Q03640) Hypothetical 171.1 kDa protein in RPL6A-DAK1... 39 0.060
KPCA_MOUSE (P20444) Protein kinase C, alpha type (EC 2.7.1.37) (... 39 0.060
YNI7_YEAST (P48231) Hypothetical 132.5 kDa protein in TOP2-MKT1 ... 39 0.078
KPCA_RAT (P05696) Protein kinase C, alpha type (EC 2.7.1.37) (PK... 38 0.10
KPCA_RABIT (P10102) Protein kinase C, alpha type (EC 2.7.1.37) (... 38 0.10
KPCA_HUMAN (P17252) Protein kinase C, alpha type (EC 2.7.1.37) (... 38 0.10
KPCB_RAT (P68403) Protein kinase C, beta type (EC 2.7.1.37) (PKC... 38 0.13
KPCB_RABIT (P05772) Protein kinase C, beta type (EC 2.7.1.37) (P... 38 0.13
KPCB_MOUSE (P68404) Protein kinase C, beta type (EC 2.7.1.37) (P... 38 0.13
KPCB_HUMAN (P05771) Protein kinase C, beta type (EC 2.7.1.37) (P... 38 0.13
KPCB_BOVIN (P05126) Protein kinase C, beta type (EC 2.7.1.37) (P... 38 0.13
PERF_MOUSE (P10820) Perforin 1 precursor (P1) (Lymphocyte pore f... 37 0.17
>LIP_RHIMI (P19515) Lipase precursor (EC 3.1.1.3) (Triacylglycerol
lipase)
Length = 363
Score = 56.6 bits (135), Expect = 3e-07
Identities = 60/250 (24%), Positives = 91/250 (36%), Gaps = 87/250 (34%)
Query: 545 DTQVAIWRDSMRRRLVVAFRGTEQSQWKDLITDLMIVPAGLASSSFSSAQASILDPKGVF 604
DT + R + + + FRG+ S ++ I DL VP
Sbjct: 155 DTNAMVARGDSEKTIYIVFRGS--SSIRNWIADLTFVP---------------------- 190
Query: 605 VGVRYPIARLNPERIGGDFKQEVQVHSGFLSAYDSVRTRIISLIRLAIGYVDDHFEPLHK 664
V YP + G +VH GFL +Y V+ +++ + D F+
Sbjct: 191 --VSYP-------PVSG-----TKVHKGFLDSYGEVQNELVATVL-------DQFKQYPS 229
Query: 665 WHIYVTGHSLGGALATLLALELSSNQLTNMVDYVEEPKTHHIRQIMIANYGRISAMALSC 724
+ + VTGHSLGGA A L AL+L Y R ++ S
Sbjct: 230 YKVAVTGHSLGGATALLCALDL---------------------------YQREEGLSSS- 261
Query: 725 PIFDNNAHLRGAISITMYNFGSPRVGNKRFAEVYNEKIKDSWRVVNHRDIIPTV-PRLMG 783
++ +Y G PRVG+ FA R VN RDI+P + P G
Sbjct: 262 -------------NLFLYTQGQPRVGDPAFANYVVSTGIPYRRTVNERDIVPHLPPAAFG 308
Query: 784 YCHVNQPVFL 793
+ H + ++
Sbjct: 309 FLHAGEEYWI 318
>LIP_THELA (O59952) Lipase precursor (EC 3.1.1.3) (Triacylglycerol
lipase)
Length = 291
Score = 52.0 bits (123), Expect = 7e-06
Identities = 46/197 (23%), Positives = 78/197 (39%), Gaps = 56/197 (28%)
Query: 630 HSGFLSAYDSVRTRIISLIRLAIGYVDDHFEPLHKWHIYVTGHSLGGALATLLALELSSN 689
H GF S++ SV + + A+ D+ + TGHSLGGALAT+ +L N
Sbjct: 132 HDGFTSSWRSVADTLRQKVEDAVREHPDY-------RVVFTGHSLGGALATVAGADLRGN 184
Query: 690 QLTNMVDYVEEPKTHHIRQIMIANYGRISAMALSCPIFDNNAHLRGAISITMYNFGSPRV 749
I ++++G+PRV
Sbjct: 185 ----------------------------------------------GYDIDVFSYGAPRV 198
Query: 750 GNKRFAEVYNEKIKDS-WRVVNHRDIIPTV-PRLMGYCHVNQPVFLAAGVLRNSLENKDI 807
GN+ FAE + + +R+ + DI+P + PR GY H + ++ +G L N +
Sbjct: 199 GNRAFAEFLTVQTGGTLYRITHTNDIVPRLPPREFGYSHSSPEYWIKSGTLVPVTRNDIV 258
Query: 808 LGDGYEGDVLGESTPDV 824
+G + G + P++
Sbjct: 259 KIEGIDA-TGGNNQPNI 274
>LIP_RHIOR (P61872) Lipase precursor (EC 3.1.1.3) (Triacylglycerol
lipase)
Length = 392
Score = 52.0 bits (123), Expect = 7e-06
Identities = 51/185 (27%), Positives = 76/185 (40%), Gaps = 54/185 (29%)
Query: 628 QVHSGFLSAYDSVRTRIISLIRLAIGYVDDHFEPLHKWHIYVTGHSLGGALATLLALELS 687
+VH+GFLS+Y+ V +++ + P +K + VTGHSLGGA A L ++L
Sbjct: 230 KVHAGFLSSYEQVVNDYFPVVQEQLTA-----HPTYK--VIVTGHSLGGAQALLAGMDL- 281
Query: 688 SNQLTNMVDYVEEPKTHHIRQIMIANYGRISAMALSCPIFDNNAHLRGAISITMYNFGSP 747
Y EP R+S LS ++ G P
Sbjct: 282 ---------YQREP--------------RLSPKNLS-----------------IFTVGGP 301
Query: 748 RVGNKRFAEVYNEKIKDSWRVVNHRDIIPTV-PRLMGYCHVNQPVFLAAG-----VLRNS 801
RVGN FA R V+ RDI+P V P+ G+ H ++ +G + +
Sbjct: 302 RVGNPTFAYYVESTGIPFQRTVHKRDIVPHVPPQSFGFLHPGVESWIKSGTSNVQICTSE 361
Query: 802 LENKD 806
+E KD
Sbjct: 362 IETKD 366
>FAEA_ASPAW (Q9P979) Feruloyl esterase A precursor (EC 3.1.1.73)
(Ferulic acid esterase A) (FAEA) (Feruloylesterase)
Length = 281
Score = 50.8 bits (120), Expect = 2e-05
Identities = 44/167 (26%), Positives = 67/167 (39%), Gaps = 61/167 (36%)
Query: 628 QVHSGFLSAYDSVRTRIISLIRLAIGYVDDHFEPLHKWHIYVTGHSLGGALATLLALELS 687
+VH G+ + SV+ ++ SL++ + D+ + VTGHSLG +LA L A +LS
Sbjct: 116 EVHGGYYIGWVSVQDQVESLVKQQVSQYPDYA-------LTVTGHSLGASLAALTAAQLS 168
Query: 688 SNQLTNMVDYVEEPKTHHIRQIMIANYGRISAMALSCPIFDNNAHLRGAISITMYNFGSP 747
+ +DN I +Y FG P
Sbjct: 169 AT-------------------------------------YDN---------IRLYTFGEP 182
Query: 748 RVGNKRFAEVYNEKIKDS-------WRVVNHRDIIPTVPRL-MGYCH 786
R GN+ FA N+ + S +RV + D IP +P + GY H
Sbjct: 183 RSGNQAFASYMNDAFQASSPDTTQYFRVTHANDGIPNLPPVEQGYAH 229
>RSG5_HUMAN (O43374) Ras GTPase-activating protein 4
(RasGAP-activating-like protein 2) (Calcium-promoted Ras
inactivator)
Length = 803
Score = 45.8 bits (107), Expect = 5e-04
Identities = 24/71 (33%), Positives = 41/71 (56%)
Query: 105 GTSDPYVVFQMDSQTVKSNIKWGTKEPTWNEEFTFNIKLPPNKPLQVAAWDANLVAPHKR 164
GTSDP+V + +T +++I + P WNE F F ++ + L V AWD +LV+ +
Sbjct: 152 GTSDPFVRVRYKGRTRETSIVKKSCYPRWNETFEFELQEGAMEALCVEAWDWDLVSRNDF 211
Query: 165 MGNAGVDLEWL 175
+G +D++ L
Sbjct: 212 LGKVVIDVQRL 222
Score = 33.5 bits (75), Expect = 2.5
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 105 GTSDPYVVFQMDSQ-TVKSNIKWGTKEPTWNEEFTFNIKLPP 145
G+SDPY + ++D++ +++ W T P W EE + + LPP
Sbjct: 24 GSSDPYCIVKVDNEPIIRTATVWKTLCPFWGEE--YQVHLPP 63
>FAEA_ASPTU (O42815) Feruloyl esterase A precursor (EC 3.1.1.73)
(Ferulic acid esterase A)
Length = 280
Score = 43.5 bits (101), Expect = 0.002
Identities = 57/254 (22%), Positives = 85/254 (33%), Gaps = 97/254 (38%)
Query: 541 NAPTDTQVAIWRDSMRRRLVVAFRGTEQSQWKDLITDLMIVPAGLASSSFSSAQASILDP 600
N+ TD I RD + ++ FRGT L T+ + P S
Sbjct: 64 NSQTDINGWILRDDSSKEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNSC-------- 115
Query: 601 KGVFVGVRYPIARLNPERIGGDFKQEVQVHSGFLSAYDSVRTRIISLIRLAIGYVDDHFE 660
+VH G+ + SV+ ++ SL++ + D+
Sbjct: 116 ---------------------------EVHGGYYIGWISVQDQVESLVQQQVSQFPDYA- 147
Query: 661 PLHKWHIYVTGHSLGGALATLLALELSSNQLTNMVDYVEEPKTHHIRQIMIANYGRISAM 720
+ VTGHSLG +LA L A +LS+
Sbjct: 148 ------LTVTGHSLGASLAALTAAQLSAT------------------------------- 170
Query: 721 ALSCPIFDNNAHLRGAISITMYNFGSPRVGNKRFAEVYNEKIKDS-------WRVVNHRD 773
+DN I +Y FG PR N+ FA N+ + S +RV + D
Sbjct: 171 ------YDN---------IRLYTFGEPR-SNQAFASYMNDAFQASSPDTTQYFRVTHAND 214
Query: 774 IIPTVPRL-MGYCH 786
IP +P GY H
Sbjct: 215 GIPNLPPADEGYAH 228
>IFR1_HUMAN (O00458) Interferon-related developmental regulator 1
(Nerve growth factor-inducible protein PC4)
Length = 451
Score = 41.6 bits (96), Expect = 0.009
Identities = 53/224 (23%), Positives = 93/224 (40%), Gaps = 24/224 (10%)
Query: 309 SEQRNTEEFHSHESDTENGHTSEPSTQTSGEELSNQLFWRDFTNVINVNVVQKLGLTVPG 368
+++RNT S +G + + G+ + Q F + ++ ++ G + P
Sbjct: 4 NKKRNTPHRGSSAGGGGSGAAAATAATAGGQHRNVQPFSDEDASIETMSHCS--GYSDPS 61
Query: 369 KFKWDGLEFLDKIGSQSQNIAEATYIQSGLAMPRGIDDTEDKTSGKPAIAAIQSALPEVK 428
F DG E LD+ G+Q + Y + GL ID T DK++ Q+AL +K
Sbjct: 62 SFAEDGPEVLDEEGTQE----DLEYKRKGL-----IDLTLDKSA-----KTRQAALEGIK 107
Query: 429 KATESLMRQTDSILGGLMLLAATVSKMKDEGSSSEERKIEEDSAKVGGNDIQCLPKIPSS 488
A S M + IL M L ++ + +G S E+R A + C+ P
Sbjct: 108 NALASKMLY-EFILERRMTLTDSIERCLKKGKSDEQR------AAAALASVLCIQLGPGI 160
Query: 489 ENGSVLDDKKAEEMRELFSTAETAMEAWAMLATSLGHASFIKSE 532
E+ +L ++++ +M+A AT G FI ++
Sbjct: 161 ESEEIL-KTLGPILKKIICDGSASMQARQTCATCFGVCCFIATD 203
>PERF_RAT (P35763) Perforin 1 precursor (P1) (Lymphocyte pore
forming protein) (Cytolysin)
Length = 554
Score = 39.3 bits (90), Expect = 0.046
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 106 TSDPYVVFQMDSQTVKSNIKWGTKEPTWNEEFTF-NIKLPPNKPLQVAAWDAN 157
++D Y+ Q +++ + W P+W+++ F N+ L PL+V WDA+
Sbjct: 433 STDAYLKVFFGGQEIRTGVVWNNNHPSWSDKMDFGNVLLSTGGPLRVQVWDAD 485
>YMH2_YEAST (Q03640) Hypothetical 171.1 kDa protein in RPL6A-DAK1
intergenic region
Length = 1545
Score = 38.9 bits (89), Expect = 0.060
Identities = 26/88 (29%), Positives = 39/88 (43%), Gaps = 1/88 (1%)
Query: 105 GTSDPYV-VFQMDSQTVKSNIKWGTKEPTWNEEFTFNIKLPPNKPLQVAAWDANLVAPHK 163
G SDP+V +F D + KSNIK T +P WNE+ I + D + +
Sbjct: 1153 GYSDPFVHIFVNDKKVFKSNIKKKTLDPVWNEDAKIPILSRSKNQVIFNVLDWDRAGDND 1212
Query: 164 RMGNAGVDLEWLCDGDVHEILVELEGMG 191
+G A +D+ L G + + L G
Sbjct: 1213 DLGQASLDVSSLEVGKTYNWNLNLNTQG 1240
>KPCA_MOUSE (P20444) Protein kinase C, alpha type (EC 2.7.1.37)
(PKC-alpha) (PKC-A)
Length = 671
Score = 38.9 bits (89), Expect = 0.060
Identities = 26/77 (33%), Positives = 38/77 (48%), Gaps = 18/77 (23%)
Query: 103 PPGTSDPYVVFQM----------DSQTVKSNIKWGTKEPTWNEEFTFNIKLPPNKP--LQ 150
P G SDPYV ++ ++T++SN+ P WNE FTF +K P +K L
Sbjct: 187 PNGLSDPYVKLKLIPDPKNESKQKTKTIRSNLN-----PQWNESFTFKLK-PSDKDRRLS 240
Query: 151 VAAWDANLVAPHKRMGN 167
V WD + + MG+
Sbjct: 241 VEIWDWDRTTRNDFMGS 257
>YNI7_YEAST (P48231) Hypothetical 132.5 kDa protein in TOP2-MKT1
intergenic region
Length = 1178
Score = 38.5 bits (88), Expect = 0.078
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 105 GTSDPYVVFQMDSQTV----KSNIKWGTKEPTWNEEFTFNIKLPPNKPLQVAAWDANLVA 160
G SDPYV F ++ ++ K+ ++ T PTWNE T + N L + D
Sbjct: 1002 GYSDPYVEFFLNEKSTSPFFKTAVQKKTLNPTWNESKTIEVSNRVNDYLTINVKDYESTN 1061
Query: 161 PHKRMGNAGVDLEWLCDGDVHEILVELEGMGG--GGKVQLEVKYK 203
++ +G A V L + + L G G GG + LE +++
Sbjct: 1062 SNRSIGKAVVPLSTIDPESDTTFNIPLVGPKGEDGGVLHLEFEFE 1106
>KPCA_RAT (P05696) Protein kinase C, alpha type (EC 2.7.1.37)
(PKC-alpha) (PKC-A)
Length = 671
Score = 38.1 bits (87), Expect = 0.10
Identities = 25/72 (34%), Positives = 34/72 (46%), Gaps = 8/72 (11%)
Query: 103 PPGTSDPYVVFQM-----DSQTVKSNIKWGTKEPTWNEEFTFNIKLPPNKP--LQVAAWD 155
P G SDPYV ++ + K+ T P WNE FTF +K P +K L V WD
Sbjct: 187 PNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLK-PSDKDRRLSVEIWD 245
Query: 156 ANLVAPHKRMGN 167
+ + MG+
Sbjct: 246 WDRTTRNDFMGS 257
>KPCA_RABIT (P10102) Protein kinase C, alpha type (EC 2.7.1.37)
(PKC-alpha) (PKC-A)
Length = 671
Score = 38.1 bits (87), Expect = 0.10
Identities = 25/72 (34%), Positives = 34/72 (46%), Gaps = 8/72 (11%)
Query: 103 PPGTSDPYVVFQM-----DSQTVKSNIKWGTKEPTWNEEFTFNIKLPPNKP--LQVAAWD 155
P G SDPYV ++ + K+ T P WNE FTF +K P +K L V WD
Sbjct: 187 PNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLK-PSDKDRRLSVEIWD 245
Query: 156 ANLVAPHKRMGN 167
+ + MG+
Sbjct: 246 WDRTTRNDFMGS 257
>KPCA_HUMAN (P17252) Protein kinase C, alpha type (EC 2.7.1.37)
(PKC-alpha) (PKC-A)
Length = 671
Score = 38.1 bits (87), Expect = 0.10
Identities = 25/72 (34%), Positives = 34/72 (46%), Gaps = 8/72 (11%)
Query: 103 PPGTSDPYVVFQM-----DSQTVKSNIKWGTKEPTWNEEFTFNIKLPPNKP--LQVAAWD 155
P G SDPYV ++ + K+ T P WNE FTF +K P +K L V WD
Sbjct: 187 PNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLK-PSDKDRRLSVEIWD 245
Query: 156 ANLVAPHKRMGN 167
+ + MG+
Sbjct: 246 WDRTTRNDFMGS 257
>KPCB_RAT (P68403) Protein kinase C, beta type (EC 2.7.1.37)
(PKC-beta) (PKC-B)
Length = 671
Score = 37.7 bits (86), Expect = 0.13
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 103 PPGTSDPYVVFQMDSQTVKSNIKWGTK------EPTWNEEFTFNIK-LPPNKPLQVAAWD 155
P G SDPYV ++ KS K TK P WNE F F +K ++ L V WD
Sbjct: 188 PNGLSDPYVKLKLIPDP-KSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWD 246
Query: 156 ANLVAPHKRMGN 167
+L + + MG+
Sbjct: 247 WDLTSRNDFMGS 258
>KPCB_RABIT (P05772) Protein kinase C, beta type (EC 2.7.1.37)
(PKC-beta) (PKC-B)
Length = 671
Score = 37.7 bits (86), Expect = 0.13
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 103 PPGTSDPYVVFQMDSQTVKSNIKWGTK------EPTWNEEFTFNIK-LPPNKPLQVAAWD 155
P G SDPYV ++ KS K TK P WNE F F +K ++ L V WD
Sbjct: 188 PNGLSDPYVKLKLIPDP-KSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWD 246
Query: 156 ANLVAPHKRMGN 167
+L + + MG+
Sbjct: 247 WDLTSRNDFMGS 258
>KPCB_MOUSE (P68404) Protein kinase C, beta type (EC 2.7.1.37)
(PKC-beta) (PKC-B)
Length = 673
Score = 37.7 bits (86), Expect = 0.13
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 103 PPGTSDPYVVFQMDSQTVKSNIKWGTK------EPTWNEEFTFNIK-LPPNKPLQVAAWD 155
P G SDPYV ++ KS K TK P WNE F F +K ++ L V WD
Sbjct: 188 PNGLSDPYVKLKLIPDP-KSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWD 246
Query: 156 ANLVAPHKRMGN 167
+L + + MG+
Sbjct: 247 WDLTSRNDFMGS 258
>KPCB_HUMAN (P05771) Protein kinase C, beta type (EC 2.7.1.37)
(PKC-beta) (PKC-B)
Length = 671
Score = 37.7 bits (86), Expect = 0.13
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 103 PPGTSDPYVVFQMDSQTVKSNIKWGTK------EPTWNEEFTFNIK-LPPNKPLQVAAWD 155
P G SDPYV ++ KS K TK P WNE F F +K ++ L V WD
Sbjct: 188 PNGLSDPYVKLKLIPDP-KSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWD 246
Query: 156 ANLVAPHKRMGN 167
+L + + MG+
Sbjct: 247 WDLTSRNDFMGS 258
>KPCB_BOVIN (P05126) Protein kinase C, beta type (EC 2.7.1.37)
(PKC-beta) (PKC-B)
Length = 673
Score = 37.7 bits (86), Expect = 0.13
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 103 PPGTSDPYVVFQMDSQTVKSNIKWGTK------EPTWNEEFTFNIK-LPPNKPLQVAAWD 155
P G SDPYV ++ KS K TK P WNE F F +K ++ L V WD
Sbjct: 188 PNGLSDPYVKLKLIPDP-KSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWD 246
Query: 156 ANLVAPHKRMGN 167
+L + + MG+
Sbjct: 247 WDLTSRNDFMGS 258
>PERF_MOUSE (P10820) Perforin 1 precursor (P1) (Lymphocyte pore
forming protein) (Cytolysin)
Length = 554
Score = 37.4 bits (85), Expect = 0.17
Identities = 18/59 (30%), Positives = 28/59 (46%), Gaps = 4/59 (6%)
Query: 100 YTTPPGTSDPYVVFQMDSQTVKSNIKWGTKEPTWNEEFTF-NIKLPPNKPLQVAAWDAN 157
YTT +D Y+ Q ++ + W P W ++ F N+ L PL+V WDA+
Sbjct: 430 YTT---ATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDAD 485
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.316 0.133 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,323,687
Number of Sequences: 164201
Number of extensions: 4555346
Number of successful extensions: 12345
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 12259
Number of HSP's gapped (non-prelim): 160
length of query: 876
length of database: 59,974,054
effective HSP length: 119
effective length of query: 757
effective length of database: 40,434,135
effective search space: 30608640195
effective search space used: 30608640195
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 70 (31.6 bits)
Lotus: description of TM0082a.8