BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0081b.1
(360 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TSKS_HUMAN (Q9UJT2) Testis-specific serine kinase substrate (Tes... 36 0.17
YY04_METJA (Q60303) Hypothetical protein MJECS04 33 1.5
METE_BACSU (P80877) 5-methyltetrahydropteroyltriglutamate--homoc... 33 1.5
A36D_DROME (Q9V3R1) Accessory gland protein Acp36DE precursor 33 1.5
LRF5_MOUSE (Q8BXA0) Leucine rich repeat and fibronectin type III... 32 1.9
FAT1_SCHPO (O13735) Actin interacting protein 3 homolog 32 1.9
ERC1_MOUSE (Q99MI1) ERC protein 1 (Rab6-interacting protein 2) (... 32 1.9
ANC1_CAEEL (Q9N4M4) Nuclear anchorage protein 1 (Anchorage 1 pro... 32 1.9
FLIH_BORBU (P52611) Flagellar assembly protein fliH 32 2.5
CC25_CANAL (P43069) Cell division control protein 25 32 2.5
YG46_YEAST (P53301) Hypothetical 52.8 kDa protein in BUB1-HIP1 i... 32 3.3
Y481_HUMAN (O75069) Hypothetical protein KIAA0481 (Cerebral prot... 32 3.3
XYLF_HAEIN (P45047) D-xylose-binding periplasmic protein precursor 32 3.3
MYS_AEQIR (P24733) Myosin heavy chain, striated muscle 32 3.3
TSKS_RAT (P60531) Testis-specific serine kinase substrate (Testi... 31 4.3
TSKS_MOUSE (O54887) Testis-specific serine kinase substrate (Tes... 31 4.3
S266_HUMAN (Q9BXS9) Solute carrier family 26 member 6 (Pendrin-l... 31 4.3
RBP1_PLAVB (Q00798) Reticulocyte binding protein 1 precursor 31 4.3
MY5A_HUMAN (Q9Y4I1) Myosin Va (Myosin 5A) (Dilute myosin heavy c... 31 4.3
YN83_CAEEL (Q03609) Hypothetical protein ZC84.3 in chromosome III 31 5.6
>TSKS_HUMAN (Q9UJT2) Testis-specific serine kinase substrate
(Testis-specific kinase substrate) (STK22 substrate 1)
Length = 592
Score = 35.8 bits (81), Expect = 0.17
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 218 YIQQLQSELTNVKEELNARKQEMMQLE-YDRGIRNNLLEYLRSL-DPEMVTELSRPSSVE 275
++Q LQSE + + E L R+QE +LE Y ++ N + RS+ D E+ T + + +S
Sbjct: 160 HVQSLQSECSVLSENLERRRQEAEELEGYCIQLKENCWKVTRSVEDAEIKTNVLKQNSAL 219
Query: 276 VEDIIHQLVQNI 287
+E+ + L Q +
Sbjct: 220 LEEKLRYLQQQL 231
>YY04_METJA (Q60303) Hypothetical protein MJECS04
Length = 135
Score = 32.7 bits (73), Expect = 1.5
Identities = 36/119 (30%), Positives = 56/119 (46%), Gaps = 33/119 (27%)
Query: 220 QQLQSELTNVKEELNARKQEM--MQLEYDRGIRNNLLEYLRSLDPEMVTELSRPSSVEVE 277
++L +L N + ELN K+E+ +QLE++ I +N +Y+ S E+
Sbjct: 34 EKLNKKLDNFENELNFIKKEIERIQLEFNNVINSNNNDYV--------------SKKELN 79
Query: 278 DIIHQLVQNILSRFFVDDASGSFMEQSVEGNIDN--HPDNGDEFSDTVGTSRDYLAKLL 334
DI++QL N LS V G I N H +N E S+TV ++ L +LL
Sbjct: 80 DIVNQL--NTLSTL-------------VNGLIINISHGNNLKESSNTVDDVKNRLLELL 123
>METE_BACSU (P80877)
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase (EC 2.1.1.14) (Methionine synthase,
vitamin-B12 independent isozyme) (Cobalamin-independent
methionine synthase) (Superoxide-inducible protein 9)
(SOI9)
Length = 761
Score = 32.7 bits (73), Expect = 1.5
Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 127 PLHRLLVSSIITGYTLWNAEYRMSLTRNLDIASPCGARDSDCEKRSEILEVKGGGEDGGE 186
P ++L + +I G +W A+ SL LD+ S + + S +L+V
Sbjct: 278 PTDKVLAAGVIDGRNIWKADLEESLDAVLDVLSIAKVDELWIQPSSSLLDVPVAKHPDEH 337
Query: 187 IEVASDLGLKDLENCSSSPRVFGDLPPQALNYIQQLQSELTNVKEELNARK----QEMMQ 242
+E KDL N L+Y ++ +ELT +KE L + K +E+ Q
Sbjct: 338 LE-------KDLLN--------------GLSYAKEKLAELTALKEGLVSGKAAISEEIQQ 376
Query: 243 LEYD 246
+ D
Sbjct: 377 AKAD 380
>A36D_DROME (Q9V3R1) Accessory gland protein Acp36DE precursor
Length = 912
Score = 32.7 bits (73), Expect = 1.5
Identities = 23/74 (31%), Positives = 40/74 (53%), Gaps = 9/74 (12%)
Query: 221 QLQSELTNVKEELNARKQEMMQLEYDRGIRNNLLEYLRSLDPEMVTELSRPSSVEVED-- 278
QLQ +N + ++ QE +QL+ D+ +R LE ++ L+ + + EL + E++
Sbjct: 523 QLQESKSNSLSQSQSQSQEQLQLQRDQNLRQ--LEQIK-LEMQNIRELLQKGKSELQTQS 579
Query: 279 ----IIHQLVQNIL 288
IH+L QNIL
Sbjct: 580 DSQRRIHELYQNIL 593
>LRF5_MOUSE (Q8BXA0) Leucine rich repeat and fibronectin type III
domain containing protein 5 precursor
Length = 719
Score = 32.3 bits (72), Expect = 1.9
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 11/152 (7%)
Query: 144 NAEYRMSLTRNLDIASPCGARDSDCE---KRSEILEVKGGGEDGGEIEVASDLGLKDLEN 200
N +++++ N+ + GA+ C +S + G E+ +VASD ++ E
Sbjct: 558 NGQHKVTKVSNV-YSQTNGAQMQGCSVTLPQSMSKQAMGHEENAQCCKVASDNAIQSSET 616
Query: 201 CSS--SPRVFGDLPPQALNY--IQQLQSELTNVKEELNARKQEMMQLEYDRGIRNNLLE- 255
CSS S LPP + + Q Q T K + + + +E RNN
Sbjct: 617 CSSQDSSTTTSALPPTWTSSAPVSQKQKRKTGTKPSAEPQSEAVTNVESQNTNRNNSTAL 676
Query: 256 YLRSLDPEMVTELSRPSSVEVEDIIHQLVQNI 287
L S P+ VTE P+S + L+ N+
Sbjct: 677 QLASCPPDSVTE--GPTSQRAHTKPNALLTNV 706
>FAT1_SCHPO (O13735) Actin interacting protein 3 homolog
Length = 1385
Score = 32.3 bits (72), Expect = 1.9
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 18/114 (15%)
Query: 218 YIQQLQSELTNVKEELNARKQEMMQLEYDRGIRNNLLEYLRSLDPEMVT-----ELSRPS 272
Y Q+Q E+ N+K + AR Q + + E + + LL+ + E+ T +L++
Sbjct: 1154 YRDQIQLEVLNLKPDSEARLQAIERSELLQ--KKRLLQRVDEFSKEVKTFVENEKLNKIG 1211
Query: 273 SVEVEDIIHQLVQNILSRFFVDD---------ASGSFMEQSVEGNIDNH--PDN 315
E D I + + + DD GSF+E+S + +D H PDN
Sbjct: 1212 GAEEADRIRTIQDEKVRKILWDDFVSSKRNGKNGGSFIEESSDTVLDEHVVPDN 1265
>ERC1_MOUSE (Q99MI1) ERC protein 1 (Rab6-interacting protein 2)
(Rab6IP2) (CAZ-associated structural protein 2) (CAST2)
Length = 1120
Score = 32.3 bits (72), Expect = 1.9
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 17/127 (13%)
Query: 213 PQALNYIQQLQSELTNVKEELNARKQEMMQLEYDRGIRNNLLEYLRSLDPE------MVT 266
P+ + IQQL+ E++ K+E Q E DR LLE L+ ++ E +
Sbjct: 731 PEMSDRIQQLEREISRYKDE-----SSKAQTEVDR-----LLEILKEVENEKNDKDKKIA 780
Query: 267 ELSRPSSVEVEDIIHQLVQNILSRFFVDDASGSFMEQSVEGNIDNHPDNGDEFSDTVGTS 326
EL +S +V+D ++ V N+ + V+ + M + D+ D+ + D++
Sbjct: 781 ELESLTSRQVKD-QNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQDSLRKK 839
Query: 327 RDYLAKL 333
D + +L
Sbjct: 840 DDRIEEL 846
>ANC1_CAEEL (Q9N4M4) Nuclear anchorage protein 1 (Anchorage 1 protein)
(Nesprin homolog)
Length = 8545
Score = 32.3 bits (72), Expect = 1.9
Identities = 32/149 (21%), Positives = 63/149 (41%), Gaps = 9/149 (6%)
Query: 195 LKDLENCSSSPRVFGDLPPQALNYIQQLQSELTNVKEELNARKQEMMQLEYDRGIRNNLL 254
+ D + + ++ P+ QQLQS V L+ +KQ + +E + NLL
Sbjct: 3351 IDDKKQALNKAAAVNEIAPKLQLVSQQLQSVPQEVPASLDEQKQLLEDVENQKHNLENLL 3410
Query: 255 EYLRSLDP--EMVTELSRPSSVEVEDIIHQLVQNILSRFFVDDASGSFMEQSVEGNIDNH 312
L DP + + + S+ ++D++ QL + + A + + + + +D
Sbjct: 3411 ANLPENDPTADELRQKSQWDLSRLKDLLKQLGSAVGDKLAALAAFNAARKNAEDALLDIT 3470
Query: 313 PDNG-------DEFSDTVGTSRDYLAKLL 334
++G DE D + + +AKLL
Sbjct: 3471 REDGGDDNKSPDELIDDLAKKEETVAKLL 3499
Score = 32.3 bits (72), Expect = 1.9
Identities = 32/149 (21%), Positives = 63/149 (41%), Gaps = 9/149 (6%)
Query: 195 LKDLENCSSSPRVFGDLPPQALNYIQQLQSELTNVKEELNARKQEMMQLEYDRGIRNNLL 254
+ D + + ++ P+ QQLQS V L+ +KQ + +E + NLL
Sbjct: 7917 IDDKKQALNKAAAVNEIAPKLQLVSQQLQSVPQEVPASLDEQKQLLEDVENQKHNLENLL 7976
Query: 255 EYLRSLDP--EMVTELSRPSSVEVEDIIHQLVQNILSRFFVDDASGSFMEQSVEGNIDNH 312
L DP + + + S+ ++D++ QL + + A + + + + +D
Sbjct: 7977 ANLPENDPTADELRQKSQWDLSRLKDLLKQLGSAVGEKLAALAAFNAARKNAEDALLDIT 8036
Query: 313 PDNG-------DEFSDTVGTSRDYLAKLL 334
++G DE D + + +AKLL
Sbjct: 8037 REDGGDDNKSPDELIDDLAKKEETVAKLL 8065
Score = 32.3 bits (72), Expect = 1.9
Identities = 32/149 (21%), Positives = 63/149 (41%), Gaps = 9/149 (6%)
Query: 195 LKDLENCSSSPRVFGDLPPQALNYIQQLQSELTNVKEELNARKQEMMQLEYDRGIRNNLL 254
+ D + + ++ P+ QQLQS V L+ +KQ + +E + NLL
Sbjct: 6111 IDDKKQALNKAAAVNEIAPKLQLVSQQLQSVPQEVPASLDEQKQLLEDVENQKHNLENLL 6170
Query: 255 EYLRSLDP--EMVTELSRPSSVEVEDIIHQLVQNILSRFFVDDASGSFMEQSVEGNIDNH 312
L DP + + + S+ ++D++ QL + + A + + + + +D
Sbjct: 6171 ANLPENDPTADELRQKSQWDLSRLKDLLKQLGSAVGDKLAALAAFNAARKNAEDALLDIT 6230
Query: 313 PDNG-------DEFSDTVGTSRDYLAKLL 334
++G DE D + + +AKLL
Sbjct: 6231 REDGGDDNKSPDELIDDLAKKEETVAKLL 6259
Score = 32.3 bits (72), Expect = 1.9
Identities = 32/149 (21%), Positives = 63/149 (41%), Gaps = 9/149 (6%)
Query: 195 LKDLENCSSSPRVFGDLPPQALNYIQQLQSELTNVKEELNARKQEMMQLEYDRGIRNNLL 254
+ D + + ++ P+ QQLQS V L+ +KQ + +E + NLL
Sbjct: 7014 IDDKKQALNKAAAVNEIAPKLQLVSQQLQSVPQEVPASLDEQKQLLEDVENQKHNLENLL 7073
Query: 255 EYLRSLDP--EMVTELSRPSSVEVEDIIHQLVQNILSRFFVDDASGSFMEQSVEGNIDNH 312
L DP + + + S+ ++D++ QL + + A + + + + +D
Sbjct: 7074 ANLPENDPTADELRQKSQWDLSRLKDLLKQLGSAVGDKLAALAAFNAARKNAEDALLDIT 7133
Query: 313 PDNG-------DEFSDTVGTSRDYLAKLL 334
++G DE D + + +AKLL
Sbjct: 7134 REDGGDDNKSPDELIDDLAKKEETVAKLL 7162
Score = 32.3 bits (72), Expect = 1.9
Identities = 32/149 (21%), Positives = 63/149 (41%), Gaps = 9/149 (6%)
Query: 195 LKDLENCSSSPRVFGDLPPQALNYIQQLQSELTNVKEELNARKQEMMQLEYDRGIRNNLL 254
+ D + + ++ P+ QQLQS V L+ +KQ + +E + NLL
Sbjct: 5208 IDDKKQALNKAAAVNEIAPKLQLVSQQLQSVPQEVPASLDEQKQLLEDVENQKHNLENLL 5267
Query: 255 EYLRSLDP--EMVTELSRPSSVEVEDIIHQLVQNILSRFFVDDASGSFMEQSVEGNIDNH 312
L DP + + + S+ ++D++ QL + + A + + + + +D
Sbjct: 5268 ANLPENDPTADELRQKSQWDLSRLKDLLKQLGSAVGDKLAALAAFNAARKNAEDALLDIT 5327
Query: 313 PDNG-------DEFSDTVGTSRDYLAKLL 334
++G DE D + + +AKLL
Sbjct: 5328 REDGGDDNKSPDELIDDLAKKEETVAKLL 5356
>FLIH_BORBU (P52611) Flagellar assembly protein fliH
Length = 306
Score = 32.0 bits (71), Expect = 2.5
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 219 IQQLQSELTNVKEELNARKQEMMQLEYDRGIRNNLLEYLRSLDPEMVTELSRPSSVEVED 278
+ ++S+++N+KEEL + E +QLE + R L + ++ + + E ++ + EV +
Sbjct: 39 VYDIESQISNLKEELQLLRDEKLQLEEELAKRQELAKEEVQIESKRLIEEAKAKANEVLE 98
Query: 279 IIHQ 282
Q
Sbjct: 99 AAKQ 102
>CC25_CANAL (P43069) Cell division control protein 25
Length = 1333
Score = 32.0 bits (71), Expect = 2.5
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 216 LNYIQQLQSELTNVKEELNARKQEMMQLEYDRGIRNNLLEYLRSLDPEMVTELSRPSSVE 275
+NYI QL E+ N++E +N+ + ++L ++ I+N+ +Y + S S E
Sbjct: 513 MNYINQLVYEIDNLRENVNSIVKIFLKLSANKKIKNS--DY----------DSSDASDDE 560
Query: 276 VEDIIHQLVQNILSRFFVDDASG 298
ED L Q + RF VD+ +G
Sbjct: 561 GEDRFDILPQ-VYPRFLVDEFNG 582
>YG46_YEAST (P53301) Hypothetical 52.8 kDa protein in BUB1-HIP1
intergenic region
Length = 507
Score = 31.6 bits (70), Expect = 3.3
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 15/116 (12%)
Query: 44 ADGFSSSSSSSSSDDVVSTRKSTFDRGFTVIANMLRRIEPLDNSVISKGVSDAARDSMKQ 103
A+G S SSSS+SS V S+ S TV +++ + +S +S VS S
Sbjct: 297 ANGGSISSSSTSSSTVSSSASS------TVSSSVSSTVSSSASSTVSSSVSSTV--SSSS 348
Query: 104 TISTMLGLLPSDHFSVTVTVSKHPLHRLLVSSIITGYTLWNAEYRMSLTRNLDIAS 159
++S+ PS S T T SK L SS+ T ++ + E + S + +AS
Sbjct: 349 SVSSSSSTSPS---SSTATSSK----TLASSSVTTSSSISSFEKQSSSSSKKTVAS 397
>Y481_HUMAN (O75069) Hypothetical protein KIAA0481 (Cerebral
protein-11) (hucep-11) (Fragment)
Length = 650
Score = 31.6 bits (70), Expect = 3.3
Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 11/126 (8%)
Query: 162 GARDSDCEKRSEILEVKGGGEDGGE-IEVASDLGLKDLENCSSSPRVFGDLPPQALNYIQ 220
G D+ E+ EI E + ED E ++ + C R + + LN +
Sbjct: 455 GNLDALLEELREIKEGQSHLEDSMEDLKTQLQRDYTYMTQCLQEERYRYERLEEQLNDLT 514
Query: 221 QL-QSELTNVKEELNARKQEMMQLEYDRGIRNNLLEYLRSLDPEMVTELSRPSSVEVEDI 279
+L Q+E+TN+K+EL + ++++ Y+R R + + + L+R + +E++
Sbjct: 515 ELHQNEMTNLKQELASMEEKVAYQSYERA---------RDIQEAVESCLTRVTKLELQQQ 565
Query: 280 IHQLVQ 285
Q+VQ
Sbjct: 566 QQQVVQ 571
>XYLF_HAEIN (P45047) D-xylose-binding periplasmic protein precursor
Length = 332
Score = 31.6 bits (70), Expect = 3.3
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 226 LTNVKEELNARKQEMMQLEYDRGIRNNLLEYLRSLDPEMVTELSRPSSVEVE 277
L+NV E A+K+ + L YDR I N L++ S D E V EL S V V+
Sbjct: 95 LSNVISE--AKKEGIKVLAYDRLINNADLDFYVSFDNEKVGELQAKSIVAVK 144
>MYS_AEQIR (P24733) Myosin heavy chain, striated muscle
Length = 1938
Score = 31.6 bits (70), Expect = 3.3
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Query: 210 DLPPQALNYIQQLQSELTNVKEELNARKQEMMQLEYDRGIRNNLLEYLRSLDPEMVTELS 269
+L Q I++LQ+ + ++EEL A + ++E R N LE L E + E
Sbjct: 1096 NLVSQLQRKIKELQARIEELEEELEAERNARAKVEKQRAELNRELEEL----GERLDEAG 1151
Query: 270 RPSSVEVEDIIHQLVQNILSRFFVDDASGSFMEQSVEGNIDNHPDNGDEFSDTVGTSRDY 329
+S ++E + + + R +++AS E + H D +E +D V +
Sbjct: 1152 GATSAQIELNKKREAELLKIRRDLEEASLQH-EAQISALRKKHQDAANEMADQVDQLQKV 1210
Query: 330 LAKL 333
+KL
Sbjct: 1211 KSKL 1214
>TSKS_RAT (P60531) Testis-specific serine kinase substrate
(Testis-specific kinase substrate) (STK22 substrate 1)
Length = 585
Score = 31.2 bits (69), Expect = 4.3
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 218 YIQQLQSELTNVKEELNARKQEMMQLE----------YDRGIRNNLLEYLRSL-DPEMVT 266
++Q LQSE + + E L R+QE +LE D + N + RS+ D E+ T
Sbjct: 158 HVQTLQSECSVLSENLERRRQEAEELEGYCSQLKGPRPDVLTQENCRKVTRSVEDAEIKT 217
Query: 267 ELSRPSSVEVEDIIHQLVQNILSRF-FVDDASGSFMEQSVEGNIDNH 312
+ + +S +E+ + L Q + +A +EQ +E + H
Sbjct: 218 NVLKQNSALLEEKLRYLQQQLQDETPRRQEAELQELEQKLEAGLSRH 264
>TSKS_MOUSE (O54887) Testis-specific serine kinase substrate
(Testis-specific kinase substrate) (STK22 substrate 1)
Length = 585
Score = 31.2 bits (69), Expect = 4.3
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 218 YIQQLQSELTNVKEELNARKQEMMQLE----------YDRGIRNNLLEYLRSL-DPEMVT 266
++Q LQSE + + E L R+QE +LE D + N + RS+ D E+ T
Sbjct: 158 HVQTLQSECSVLSENLERRRQEAEELEGYCSQLKGPRPDVLTQENCRKVTRSVEDAEIKT 217
Query: 267 ELSRPSSVEVEDIIHQLVQNILSRF-FVDDASGSFMEQSVEGNIDNH 312
+ + +S +E+ + L Q + +A +EQ +E + H
Sbjct: 218 NVLKQNSALLEEKLRYLQQQLQDETPRRQEAELQELEQKLEAGLSRH 264
>S266_HUMAN (Q9BXS9) Solute carrier family 26 member 6 (Pendrin-like
protein 1) (Pendrin L1)
Length = 759
Score = 31.2 bits (69), Expect = 4.3
Identities = 19/53 (35%), Positives = 29/53 (53%), Gaps = 4/53 (7%)
Query: 82 EPLDNSVISKGVSDAARDSMKQTISTMLGL----LPSDHFSVTVTVSKHPLHR 130
+ L++S+I++ DAAR + T+S ++GL L HF VT PL R
Sbjct: 164 QALNDSMINETARDAARVQVASTLSVLVGLFQVGLGLIHFGFVVTYLSEPLVR 216
>RBP1_PLAVB (Q00798) Reticulocyte binding protein 1 precursor
Length = 2873
Score = 31.2 bits (69), Expect = 4.3
Identities = 26/125 (20%), Positives = 62/125 (48%), Gaps = 12/125 (9%)
Query: 215 ALNYIQQLQSELTNVKEELNARKQEMMQLEYDRGIRNNLLE----YLRSLDPEMVTELS- 269
++ YI+ + S + V + + K E+++ + + NL+E Y + +PE +L
Sbjct: 1133 SVTYIEAMHSHINTVAHGITSNKNEILKSVKEVEDKLNLVEQNEDYKKVKNPENEKQLEA 1192
Query: 270 -RPSSVEVEDIIHQLVQNILSRFFVDDASGSFMEQSVEGNIDNHPDNGDEFSDTVGTSRD 328
R S +++++I++ V + +++ + ++ + +G + H + +E + T G RD
Sbjct: 1193 IRGSMSKLKEVINKHVSEMTQL----ESTANTLKSNAKGKENEH--DLEELNKTKGQMRD 1246
Query: 329 YLAKL 333
KL
Sbjct: 1247 IYEKL 1251
>MY5A_HUMAN (Q9Y4I1) Myosin Va (Myosin 5A) (Dilute myosin heavy chain,
non-muscle) (Myosin heavy chain 12) (Myoxin)
Length = 1855
Score = 31.2 bits (69), Expect = 4.3
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 222 LQSELTNVKEELNARKQEMMQLEYDRGIRNNLLEYLRSLDPEMVTELSRPSSVEVEDIIH 281
L +LT+V EEL+ RK+E++ L R+ L+ ++ P+ S++ +ED
Sbjct: 1248 LMEQLTSVSEELDVRKEEVLIL------RSQLVSQKEAIQPKDDKNTMTDSTILLED--- 1298
Query: 282 QLVQNILSRFFVDDASGSFMEQSVEGNIDNHPDNGD 317
VQ + + + A E + +D H N D
Sbjct: 1299 --VQKMKDKGEIAQAYIGLKETNRSSALDYHELNED 1332
>YN83_CAEEL (Q03609) Hypothetical protein ZC84.3 in chromosome III
Length = 826
Score = 30.8 bits (68), Expect = 5.6
Identities = 23/70 (32%), Positives = 35/70 (49%), Gaps = 8/70 (11%)
Query: 178 KGG-GEDGGEIEVASDLGLKDLENCSSSPRVFG-------DLPPQALNYIQQLQSELTNV 229
KGG G + G + ++++L L LE S+S + LPP L IQ +Q L +
Sbjct: 545 KGGTGVNLGSLNISNNLALSRLEEQSTSRLMEKVNLNSTVTLPPDTLEKIQNVQDLLQKM 604
Query: 230 KEELNARKQE 239
+ NA +QE
Sbjct: 605 RSSENADEQE 614
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.135 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,019,988
Number of Sequences: 164201
Number of extensions: 1743124
Number of successful extensions: 7548
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 7522
Number of HSP's gapped (non-prelim): 60
length of query: 360
length of database: 59,974,054
effective HSP length: 111
effective length of query: 249
effective length of database: 41,747,743
effective search space: 10395188007
effective search space used: 10395188007
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Lotus: description of TM0081b.1