BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0078.10
(592 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SEB_HUMAN (Q9Y6X0) SET-binding protein (SEB) 39 0.050
TNF6_PIG (Q9BEA8) Tumor necrosis factor ligand superfamily membe... 38 0.065
HXD3_MOUSE (P09027) Homeobox protein Hox-D3 (Hox-4.1) (MH-19) 38 0.065
TNF6_HUMAN (P48023) Tumor necrosis factor ligand superfamily mem... 38 0.085
CAPU_DROME (Q24120) Cappuccino protein 38 0.085
TNF6_RAT (P36940) Tumor necrosis factor ligand superfamily membe... 37 0.11
TNF6_CERTO (Q9BDN1) Tumor necrosis factor ligand superfamily mem... 37 0.11
FMN2_MOUSE (Q9JL04) Formin 2 37 0.11
EBN2_EBV (P12978) EBNA-2 nuclear protein 37 0.11
TRAP_HUMAN (Q9Y4A5) Transformation/transcription domain-associat... 37 0.15
PCLO_RAT (Q9JKS6) Piccolo protein (Multidomain presynaptic cytom... 37 0.15
GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H... 37 0.19
ACRO_HUMAN (P10323) Acrosin precursor (EC 3.4.21.10) 37 0.19
PCLO_CHICK (Q9PU36) Piccolo protein (Aczonin) (Fragment) 36 0.25
R3HD_HUMAN (Q15032) R3H domain protein 1 36 0.32
P2BB_RAT (P20651) Serine/threonine protein phosphatase 2B cataly... 36 0.32
P2BB_MOUSE (P48453) Serine/threonine protein phosphatase 2B cata... 36 0.32
P2BB_HUMAN (P16299) Serine/threonine protein phosphatase 2B cata... 36 0.32
ENAH_MOUSE (Q03173) Enabled protein homolog (NPC derived proline... 36 0.32
DIA3_HUMAN (Q9NSV4) Diaphanous protein homolog 3 (Diaphanous-rel... 36 0.32
>SEB_HUMAN (Q9Y6X0) SET-binding protein (SEB)
Length = 1542
Score = 38.5 bits (88), Expect = 0.050
Identities = 17/31 (54%), Positives = 19/31 (60%), Gaps = 6/31 (19%)
Query: 51 LPSEQQPPLPPPPPPPRVKVFRLPPLPPVER 81
LP PPLPPPPPPP LPP PP+ +
Sbjct: 1468 LPPPPPPPLPPPPPPP------LPPPPPLPK 1492
Score = 35.8 bits (81), Expect = 0.32
Identities = 15/26 (57%), Positives = 17/26 (64%), Gaps = 6/26 (23%)
Query: 53 SEQQPPLPPPPPPPRVKVFRLPPLPP 78
+ + PPLPPPPPPP LPP PP
Sbjct: 1462 AREAPPLPPPPPPP------LPPPPP 1481
Score = 31.2 bits (69), Expect = 8.0
Identities = 15/32 (46%), Positives = 16/32 (49%)
Query: 52 PSEQQPPLPPPPPPPRVKVFRLPPLPPVERMG 83
P PP PP PPPP + PPLP R G
Sbjct: 1466 PPLPPPPPPPLPPPPPPPLPPPPPLPKTPRGG 1497
>TNF6_PIG (Q9BEA8) Tumor necrosis factor ligand superfamily member
6 (FAS antigen ligand)
Length = 282
Score = 38.1 bits (87), Expect = 0.065
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Query: 52 PSEQQPPLPPPPPPPRVKVF---RLPPLPP 78
P +++PP PPPPPPP + LPPLPP
Sbjct: 40 PGQRRPPPPPPPPPPPPTLLPSRPLPPLPP 69
>HXD3_MOUSE (P09027) Homeobox protein Hox-D3 (Hox-4.1) (MH-19)
Length = 417
Score = 38.1 bits (87), Expect = 0.065
Identities = 18/28 (64%), Positives = 18/28 (64%), Gaps = 5/28 (17%)
Query: 51 LPSEQQPPLPPPPPPPRVKVFRLPPLPP 78
L SEQQPP PPPPPPP LPP P
Sbjct: 94 LNSEQQPPQPPPPPPP-----TLPPSSP 116
>TNF6_HUMAN (P48023) Tumor necrosis factor ligand superfamily
member 6 (FAS antigen ligand) (Apoptosis antigen
ligand) (APTL) (CD178 antigen)
Length = 281
Score = 37.7 bits (86), Expect = 0.085
Identities = 15/25 (60%), Positives = 16/25 (64%)
Query: 52 PSEQQPPLPPPPPPPRVKVFRLPPL 76
P PPLPPPPPPP + LPPL
Sbjct: 47 PPPPPPPLPPPPPPPPLPPLPLPPL 71
Score = 33.5 bits (75), Expect = 1.6
Identities = 15/36 (41%), Positives = 21/36 (57%), Gaps = 4/36 (11%)
Query: 52 PSEQQPPLPPP----PPPPRVKVFRLPPLPPVERMG 83
P +++PP PPP PPPP PLPP+++ G
Sbjct: 40 PGQRRPPPPPPPPPLPPPPPPPPLPPLPLPPLKKRG 75
>CAPU_DROME (Q24120) Cappuccino protein
Length = 1059
Score = 37.7 bits (86), Expect = 0.085
Identities = 17/38 (44%), Positives = 18/38 (46%)
Query: 41 PTTNSPLTFFLPSEQQPPLPPPPPPPRVKVFRLPPLPP 78
P PL F+ PP PPPPPPP PP PP
Sbjct: 488 PPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPP 525
Score = 33.1 bits (74), Expect = 2.1
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 60 PPPPPPPRVKVFRLPPLPP 78
PPPPPPP + F PP PP
Sbjct: 486 PPPPPPPPLHAFVAPPPPP 504
Score = 32.0 bits (71), Expect = 4.7
Identities = 14/27 (51%), Positives = 14/27 (51%)
Query: 52 PSEQQPPLPPPPPPPRVKVFRLPPLPP 78
P PP PPPPPP V PP PP
Sbjct: 480 PHAVAPPPPPPPPPLHAFVAPPPPPPP 506
>TNF6_RAT (P36940) Tumor necrosis factor ligand superfamily member
6 (FAS antigen ligand)
Length = 278
Score = 37.4 bits (85), Expect = 0.11
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 52 PSEQQPPLPPPPPPPRVKVFRLPPLPPV 79
P +++PP PPPPP P + PPLPP+
Sbjct: 40 PGQRRPPPPPPPPSPLPPPSQPPPLPPL 67
>TNF6_CERTO (Q9BDN1) Tumor necrosis factor ligand superfamily
member 6 (FAS antigen ligand) (CD95L protein)
Length = 280
Score = 37.4 bits (85), Expect = 0.11
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 52 PSEQQPPLPPPPPPPRVKVFRLPPLPPVERMG 83
P PPLPPPPPPP + PLPP+++ G
Sbjct: 47 PPPPPPPLPPPPPPPLPPL----PLPPLKKRG 74
Score = 33.1 bits (74), Expect = 2.1
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Query: 52 PSEQQPPLPPPPPPPRVKVFRLPPLPPV 79
P +++PP PPPPPP + PPLPP+
Sbjct: 40 PGQRRPP--PPPPPPPLPPPPPPPLPPL 65
>FMN2_MOUSE (Q9JL04) Formin 2
Length = 1567
Score = 37.4 bits (85), Expect = 0.11
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Query: 51 LPSEQQPP------LPPPPPPPRVKVFRLPPLPPVERMGL 84
LP+ QPP +PPPPP P + +PP PP+ MG+
Sbjct: 893 LPAPPQPPPLPGLGVPPPPPAPPLPGMGIPPPPPLPGMGI 932
Score = 31.2 bits (69), Expect = 8.0
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Query: 51 LPSEQQPPLPPPP-----PPPRVKVFRLPPLPPVERMGL 84
LP PP PP P PPP + +PP PP+ MG+
Sbjct: 1026 LPGMGIPPPPPLPGSGIPPPPALPGVAIPPPPPLPGMGV 1064
Score = 31.2 bits (69), Expect = 8.0
Identities = 18/47 (38%), Positives = 24/47 (50%), Gaps = 3/47 (6%)
Query: 41 PTTNSPLTFF--LPSEQQPPLPPPPPP-PRVKVFRLPPLPPVERMGL 84
P+ +P F L + P PP PPP P + V PP PP+ MG+
Sbjct: 875 PSPTAPALQFSNLQGPEMLPAPPQPPPLPGLGVPPPPPAPPLPGMGI 921
Score = 31.2 bits (69), Expect = 8.0
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 7/40 (17%)
Query: 51 LPSEQQPPLPP------PPPPPRVKVFRLPPLPPVERMGL 84
LP PP PP PPPPP V +PP PP+ MG+
Sbjct: 993 LPGVGIPPPPPLPGVGIPPPPPLPGV-GIPPPPPLPGMGI 1031
>EBN2_EBV (P12978) EBNA-2 nuclear protein
Length = 487
Score = 37.4 bits (85), Expect = 0.11
Identities = 20/43 (46%), Positives = 22/43 (50%), Gaps = 2/43 (4%)
Query: 38 RFSPTTNSPLTFFLPSEQ--QPPLPPPPPPPRVKVFRLPPLPP 78
+ S T PLT F+ PPLPPPPPPP PP PP
Sbjct: 39 QLSDTPLIPLTIFVGENTGVPPPLPPPPPPPPPPPPPPPPPPP 81
Score = 37.0 bits (84), Expect = 0.15
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Query: 52 PSEQQPPLPPPPPPPRVKVFRLPPLPPVERMGLVDENGVMTDN---FTVGDSDLGSVVDL 108
P PP PPPPPPP PP PP R E + + + VG L S + +
Sbjct: 74 PPPPPPPPPPPPPPPSPPPPPPPPPPPQRRDAWTQEPSPLDRDPLGYDVGHGPLASAMRM 133
Query: 109 LSWKN----ESRG 117
L N +SRG
Sbjct: 134 LWMANYIVRQSRG 146
Score = 33.1 bits (74), Expect = 2.1
Identities = 14/27 (51%), Positives = 14/27 (51%)
Query: 52 PSEQQPPLPPPPPPPRVKVFRLPPLPP 78
P PP PPPPPPP PP PP
Sbjct: 70 PPPPPPPPPPPPPPPPPPPSPPPPPPP 96
Score = 32.7 bits (73), Expect = 2.7
Identities = 20/53 (37%), Positives = 22/53 (40%)
Query: 26 LFSLTLLLFLFTRFSPTTNSPLTFFLPSEQQPPLPPPPPPPRVKVFRLPPLPP 78
L LT+ + T P P P PP PPPPPPP PP PP
Sbjct: 45 LIPLTIFVGENTGVPPPLPPPPPPPPPPPPPPPPPPPPPPPPPPSPPPPPPPP 97
Score = 32.7 bits (73), Expect = 2.7
Identities = 14/27 (51%), Positives = 14/27 (51%)
Query: 52 PSEQQPPLPPPPPPPRVKVFRLPPLPP 78
P PP PPPPPPP PP PP
Sbjct: 68 PPPPPPPPPPPPPPPPPPPPPSPPPPP 94
Score = 32.7 bits (73), Expect = 2.7
Identities = 14/27 (51%), Positives = 14/27 (51%)
Query: 52 PSEQQPPLPPPPPPPRVKVFRLPPLPP 78
P PP PPPPPPP PP PP
Sbjct: 72 PPPPPPPPPPPPPPPPPSPPPPPPPPP 98
Score = 32.7 bits (73), Expect = 2.7
Identities = 14/27 (51%), Positives = 14/27 (51%)
Query: 52 PSEQQPPLPPPPPPPRVKVFRLPPLPP 78
P PP PPPPPPP PP PP
Sbjct: 69 PPPPPPPPPPPPPPPPPPPPSPPPPPP 95
>TRAP_HUMAN (Q9Y4A5) Transformation/transcription domain-associated
protein (350/400 kDa PCAF-associated factor)
(PAF350/400) (STAF40) (Tra1 homolog)
Length = 3859
Score = 37.0 bits (84), Expect = 0.15
Identities = 17/45 (37%), Positives = 21/45 (45%)
Query: 52 PSEQQPPLPPPPPPPRVKVFRLPPLPPVERMGLVDENGVMTDNFT 96
P+ P PPPPPPP P+PP E+ G D+ T T
Sbjct: 500 PAPVPAPPPPPPPPPPATPVTPAPVPPFEKQGEKDKEDKQTFQVT 544
>PCLO_RAT (Q9JKS6) Piccolo protein (Multidomain presynaptic cytomatrix
protein)
Length = 5085
Score = 37.0 bits (84), Expect = 0.15
Identities = 14/24 (58%), Positives = 15/24 (62%)
Query: 56 QPPLPPPPPPPRVKVFRLPPLPPV 79
QPP PPPPPPP PP PP+
Sbjct: 2350 QPPPPPPPPPPSPSTSSPPPTPPL 2373
>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor
(Hydroxyproline-rich glycoprotein 1)
Length = 555
Score = 36.6 bits (83), Expect = 0.19
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 40 SPTTNSPLTFFLPSEQQPPLPPPPPPPRVKVFRLPPLPP 78
SP SP P+ PP PPPPPPPR P+PP
Sbjct: 253 SPAPPSPKP---PAPPPPPSPPPPPPPRPPFPANTPMPP 288
>ACRO_HUMAN (P10323) Acrosin precursor (EC 3.4.21.10)
Length = 421
Score = 36.6 bits (83), Expect = 0.19
Identities = 15/27 (55%), Positives = 16/27 (58%)
Query: 52 PSEQQPPLPPPPPPPRVKVFRLPPLPP 78
P+ Q PP P PPPPP LPP PP
Sbjct: 340 PAAQPPPPPSPPPPPPPPASPLPPPPP 366
Score = 34.3 bits (77), Expect = 0.94
Identities = 13/22 (59%), Positives = 13/22 (59%)
Query: 57 PPLPPPPPPPRVKVFRLPPLPP 78
PP PPPPPPP PP PP
Sbjct: 347 PPSPPPPPPPPASPLPPPPPPP 368
>PCLO_CHICK (Q9PU36) Piccolo protein (Aczonin) (Fragment)
Length = 5120
Score = 36.2 bits (82), Expect = 0.25
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 5/27 (18%)
Query: 52 PSEQQPPLPPPPPPPRVKVFRLPPLPP 78
P++ PP PPPPPPP PPLPP
Sbjct: 2321 PAQPSPPSPPPPPPPPP-----PPLPP 2342
Score = 31.2 bits (69), Expect = 8.0
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 4 LPTPCSIDVLKASSSVKITALTLFSLTLLLFLFTRFSPTTNSPLTFFLPSEQQPPLPPPP 63
+PTP V+ +S+V + + + +LT +F R S + +SP PS PP PPPP
Sbjct: 2284 VPTP---RVVSKTSTVSMPS-SAPALTSKVFSLFR-SSSLDSPAQPSPPSPPPPPPPPPP 2338
Query: 64 PPPRVKVFRLPPLPP 78
P P PP+ P
Sbjct: 2339 PLP-------PPILP 2346
>R3HD_HUMAN (Q15032) R3H domain protein 1
Length = 971
Score = 35.8 bits (81), Expect = 0.32
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 7/39 (17%)
Query: 40 SPTTNSPLTFFLPSEQQPPLPPPPPPPRVKVFRLPPLPP 78
SP + + P PP PPPPPPP PPLPP
Sbjct: 449 SPQQSGYIMTAAPPPHPPPPPPPPPPP-------PPLPP 480
Score = 33.5 bits (75), Expect = 1.6
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 50 FLPSEQQPPLPPPPPPPRVKVFRLPPLPPVERMG 83
++ + PP PPPPPPP LPP PV G
Sbjct: 455 YIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAG 488
>P2BB_RAT (P20651) Serine/threonine protein phosphatase 2B
catalytic subunit, beta isoform (EC 3.1.3.16)
(Calmodulin-dependent calcineurin A subunit, beta
isoform) (CAM-PRP catalytic subunit)
Length = 525
Score = 35.8 bits (81), Expect = 0.32
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 52 PSEQQPPLPPPPPPP--RVKVFRLPPLPPVERM 82
P+ PP PPPPPPP +V + P PP R+
Sbjct: 6 PARAAPPPPPPPPPPLGADRVVKAVPFPPTHRL 38
>P2BB_MOUSE (P48453) Serine/threonine protein phosphatase 2B
catalytic subunit, beta isoform (EC 3.1.3.16)
(Calmodulin-dependent calcineurin A subunit, beta
isoform) (CAM-PRP catalytic subunit)
Length = 525
Score = 35.8 bits (81), Expect = 0.32
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 52 PSEQQPPLPPPPPPP--RVKVFRLPPLPPVERM 82
P+ PP PPPPPPP +V + P PP R+
Sbjct: 6 PARAAPPPPPPPPPPLGADRVVKAVPFPPTHRL 38
>P2BB_HUMAN (P16299) Serine/threonine protein phosphatase 2B
catalytic subunit, beta isoform (EC 3.1.3.16)
(Calmodulin-dependent calcineurin A subunit, beta
isoform) (CAM-PRP catalytic subunit)
Length = 524
Score = 35.8 bits (81), Expect = 0.32
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 52 PSEQQPPLPPPPPPP--RVKVFRLPPLPPVERM 82
P+ PP PPPPPPP +V + P PP R+
Sbjct: 6 PARAAPPPPPPPPPPPGADRVVKAVPFPPTHRL 38
>ENAH_MOUSE (Q03173) Enabled protein homolog (NPC derived
proline-rich protein 1) (NDPP-1)
Length = 802
Score = 35.8 bits (81), Expect = 0.32
Identities = 14/23 (60%), Positives = 15/23 (64%)
Query: 57 PPLPPPPPPPRVKVFRLPPLPPV 79
PP PPPPPPP PPLPP+
Sbjct: 443 PPPPPPPPPPPPPPLPPPPLPPL 465
Score = 34.7 bits (78), Expect = 0.72
Identities = 15/27 (55%), Positives = 16/27 (58%), Gaps = 6/27 (22%)
Query: 52 PSEQQPPLPPPPPPPRVKVFRLPPLPP 78
P+ PP PPPPPPP PPLPP
Sbjct: 439 PAAPPPPPPPPPPPPP------PPLPP 459
Score = 33.9 bits (76), Expect = 1.2
Identities = 14/27 (51%), Positives = 16/27 (58%)
Query: 57 PPLPPPPPPPRVKVFRLPPLPPVERMG 83
PP PPPPPPP + LPPL + G
Sbjct: 446 PPPPPPPPPPPLPPPPLPPLASLSHCG 472
Score = 33.1 bits (74), Expect = 2.1
Identities = 16/28 (57%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 51 LPSEQQPPLPPPPPPPRVKVFRLPPLPP 78
LPS PP PPPPPPP PP PP
Sbjct: 573 LPSTGPPP-PPPPPPPLPNQAPPPPPPP 599
>DIA3_HUMAN (Q9NSV4) Diaphanous protein homolog 3
(Diaphanous-related formin 3) (DRF3) (Fragment)
Length = 853
Score = 35.8 bits (81), Expect = 0.32
Identities = 15/32 (46%), Positives = 20/32 (61%), Gaps = 3/32 (9%)
Query: 57 PPLPPPPPPPRVKVFRLP---PLPPVERMGLV 85
PP PPPPPPP + R+P P+PP +G +
Sbjct: 331 PPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFL 362
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.139 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,045,402
Number of Sequences: 164201
Number of extensions: 3658579
Number of successful extensions: 20387
Number of sequences better than 10.0: 177
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 17221
Number of HSP's gapped (non-prelim): 1381
length of query: 592
length of database: 59,974,054
effective HSP length: 116
effective length of query: 476
effective length of database: 40,926,738
effective search space: 19481127288
effective search space used: 19481127288
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)
Lotus: description of TM0078.10