BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0071.7
(393 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MRS2_YEAST (Q01926) RNA splicing protein MRS2, mitochondrial pre... 89 2e-17
GSR2_DROME (Q9W3C2) Hypothetical protein CG1785 42 0.002
GLMS_CORGL (Q8NND3) Glucosamine--fructose-6-phosphate aminotrans... 40 0.013
AAC3_MOUSE (O88990) Alpha-actinin 3 (Alpha actinin skeletal musc... 40 0.013
AAC2_MOUSE (Q9JI91) Alpha-actinin 2 (Alpha actinin skeletal musc... 39 0.023
AAC2_HUMAN (P35609) Alpha-actinin 2 (Alpha actinin skeletal musc... 39 0.023
AAC2_CHICK (P20111) Alpha-actinin 2 (Alpha actinin skeletal musc... 39 0.023
SPOF_SCHPO (Q10411) Sporulation-specific protein 15 39 0.030
MYSP_ECHGR (P35417) Paramyosin 39 0.030
AAC1_CHICK (P05094) Alpha-actinin 1 (Alpha-actinin cytoskeletal ... 39 0.030
AAC1_RAT (Q9Z1P2) Alpha-actinin 1 (Alpha-actinin cytoskeletal is... 38 0.051
AAC1_MOUSE (Q7TPR4) Alpha-actinin 1 (Alpha-actinin cytoskeletal ... 38 0.051
AAC1_HUMAN (P12814) Alpha-actinin 1 (Alpha-actinin cytoskeletal ... 38 0.051
RA50_METKA (Q8TXI4) DNA double-strand break repair rad50 ATPase 37 0.11
EFER_HUMAN (O75154) Eferin 37 0.11
GLMS_COREF (Q8FNH2) Glucosamine--fructose-6-phosphate aminotrans... 36 0.15
CALB_PSEUH (O86447) Coniferyl aldehyde dehydrogenase (EC 1.2.1.6... 35 0.25
GOA4_HUMAN (Q13439) Golgi autoantigen, golgin subfamily A member... 35 0.33
AAC3_HUMAN (Q08043) Alpha-actinin 3 (Alpha actinin skeletal musc... 35 0.43
CE29_BOVIN (Q9TU23) Centrosomal protein Cep290 34 0.56
>MRS2_YEAST (Q01926) RNA splicing protein MRS2, mitochondrial
precursor
Length = 470
Score = 89.0 bits (219), Expect = 2e-17
Identities = 85/339 (25%), Positives = 147/339 (43%), Gaps = 62/339 (18%)
Query: 44 KYAIMHRVQIHARDLRILD-PLLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRDPTDE 102
K++ + + RDLR +D + TI+ + IV+NL HIKA+I ++V + D T+
Sbjct: 84 KWSFLTEHSLFPRDLRKIDNSSIDIIPTIMCKPNCIVINLLHIKALIERDKVYVFDTTNP 143
Query: 103 NVVPVVEELQRRLPKVSSLHQQQGDGQEYVSSQHDTEAAEEDESPFEFRALEVALEAICS 162
+ + L L S L + + Q Y E RALE + S
Sbjct: 144 SAAAKLSVLMYDLE--SKLSSTKNNSQFY-----------------EHRALESIFINVMS 184
Query: 163 FLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDD 222
L L++L ++++ L + +T + +RD L++LL++D
Sbjct: 185 ALETDFKLHSQICIQILNDLENEVNRLKLRHLLIKSKDLTLFYQKTLLIRDLLDELLEND 244
Query: 223 DDMADLYLSRKAGSSSPVSGSGAANWFGGSPTIGSKISRASRASLATVRFDENDVEELEM 282
DD+A++YL+ K SP +++ +LEM
Sbjct: 245 DDLANMYLTVK---KSP----------------------------------KDNFSDLEM 267
Query: 283 LLEAYFMQIDGTFNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSFYSL 342
L+E Y+ Q D + +L + I TE+ +NI LD +RN L+ LEL ++ T+ + S+
Sbjct: 268 LIETYYTQCDEYVQQSESLIQDIKSTEEIVNIILDANRNSLMLLELKVTIYTLGFTVASV 327
Query: 343 VAAIFGMNIPYSWNDNHGFMFKWVVIVSGVFSAIMFLLI 381
+ A +GMN+ ++ +W VFS + L I
Sbjct: 328 LPAFYGMNLKNFIEES-----EWGFTSVAVFSIVSALYI 361
>GSR2_DROME (Q9W3C2) Hypothetical protein CG1785
Length = 478
Score = 42.4 bits (98), Expect = 0.002
Identities = 48/209 (22%), Positives = 77/209 (35%), Gaps = 16/209 (7%)
Query: 25 SRSWILFDADGQGSLLDVDKYAIMHRVQIHARDLRILDPLLSYPSTILGREKAIVLNLEH 84
SR L A G + V +A +H A+ + P +SY + I +E
Sbjct: 178 SRELALHTAGNIGKKV-VKTHASLHHKTTKAKKFELPHPGMSYNPAPEDHQALIDQVVER 236
Query: 85 IKAIITAEEVLLRDPTDENVVPVVEELQRRLPKVSSLHQQQGDGQEYVSSQHDTEAAEED 144
+ II E+ L R T EE RR S + +G E +ED
Sbjct: 237 EEGIIKKEQHLKRVTTSMFSKVTPEERDRRRLNEMSQGMDEEEGSELDEDVQTNGKKKED 296
Query: 145 ESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRL 204
+ + + +E AR EL+ EL K+ + D +
Sbjct: 297 DDEKPYHTINAPVENKKKSKQARRNELKQKELARQTELKRKLKQQTADLI---------- 346
Query: 205 TARVQKVRDELEQLLDDDDDMADLYLSRK 233
R++ +R EL+ D+++D+ DL RK
Sbjct: 347 --RIKSIRHELD---DEEEDLNDLKKRRK 370
>GLMS_CORGL (Q8NND3) Glucosamine--fructose-6-phosphate
aminotransferase [isomerizing] (EC 2.6.1.16)
(Hexosephosphate aminotransferase)
(D-fructose-6-phosphate amidotransferase) (GFAT)
(L-glutamine-D-fructose-6-phosphate amidotransferase)
(Glucosamine-6-ph
Length = 622
Score = 39.7 bits (91), Expect = 0.013
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 21/220 (9%)
Query: 40 LDVDKYAIMHRVQIHARDLRILDPLLSYP-STILGREKAIVLNLEHIKAIIT----AEEV 94
LD D ++ ++I LR +D ++ T + +EH I T A E
Sbjct: 281 LDEDGKLVLDELRIDEAILRSVDKIVIVACGTAAYAGQVARYAIEHWCRIPTEVELAHEF 340
Query: 95 LLRDP--TDENVVPVVEELQRRLPKVSSLHQQQGDGQEYVS---SQHDTEAAEEDESPFE 149
RDP ++ +V + + + + ++ + G + V+ + T E D S +
Sbjct: 341 RYRDPILNEKTLVVALSQSGETMDTLMAVRHAREQGAKVVAICNTVGSTLPREADASLYT 400
Query: 150 FRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQ 209
+ E+A+ + +FLA T + Y L ++ D V + ++ + ++Q
Sbjct: 401 YAGPEIAVASTKAFLAQITASYLLGLY-----LAQLRGNKFADEVSSILDSLREMPEKIQ 455
Query: 210 KVRDELEQLLDDDDDMAD----LYLSRKAGSSSPVSGSGA 245
+V D EQ+ DMAD L+L R G PV+ GA
Sbjct: 456 QVIDAEEQIKKLGQDMADAKSVLFLGRHVG--FPVALEGA 493
>AAC3_MOUSE (O88990) Alpha-actinin 3 (Alpha actinin skeletal muscle
isoform 3) (F-actin cross linking protein)
Length = 900
Score = 39.7 bits (91), Expect = 0.013
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 108 VEELQRRLPKVSSLHQQQGDGQEYVSSQHDTEAAEEDESPFEFRALEVALEAICSFLAAR 167
++ L + + +SLH+ G+E + +QHD E+A S E RAL EA S LAA
Sbjct: 405 LQHLAEKFQQKASLHEAWTRGKEEMLNQHDYESA----SLQEVRALLRRHEAFESDLAAH 460
Query: 168 TTELEMAAYPA--LDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQL--LDDDD 223
+E A A L+EL ++ R + + L QK RD LE++ L +
Sbjct: 461 QDRVEHIAALAQELNELDYHEAASVNSRCQAICDQWDNLGTLTQKRRDALERMEKLLETI 520
Query: 224 DMADLYLSRKAGSSSPVSGSGAANWFGGS 252
D L +R+A + NW G+
Sbjct: 521 DQLQLEFARRAAPFN--------NWLDGA 541
>AAC2_MOUSE (Q9JI91) Alpha-actinin 2 (Alpha actinin skeletal muscle
isoform 2) (F-actin cross linking protein)
Length = 894
Score = 38.9 bits (89), Expect = 0.023
Identities = 43/141 (30%), Positives = 65/141 (45%), Gaps = 9/141 (6%)
Query: 108 VEELQRRLPKVSSLHQQQGDGQEYVSSQHDTEAAEEDESPFEFRALEVALEAICSFLAAR 167
+E L + + +S H+ G+E + Q D E+A S E RAL EA S LAA
Sbjct: 399 LEHLAEKFRQKASTHETWAYGKEQILLQKDYESA----SLTEVRALLRKHEAFESDLAAH 454
Query: 168 TTELEMAAYPA--LDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDEL---EQLLDDD 222
+E A A L+EL + DR +K+ RL QK R+ L E+LL+
Sbjct: 455 QDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERTEKLLETI 514
Query: 223 DDMADLYLSRKAGSSSPVSGS 243
D + + R A ++ + G+
Sbjct: 515 DQLHLEFAKRAAPFNNWMEGA 535
>AAC2_HUMAN (P35609) Alpha-actinin 2 (Alpha actinin skeletal muscle
isoform 2) (F-actin cross linking protein)
Length = 894
Score = 38.9 bits (89), Expect = 0.023
Identities = 43/141 (30%), Positives = 65/141 (45%), Gaps = 9/141 (6%)
Query: 108 VEELQRRLPKVSSLHQQQGDGQEYVSSQHDTEAAEEDESPFEFRALEVALEAICSFLAAR 167
+E L + + +S H+ G+E + Q D E+A S E RAL EA S LAA
Sbjct: 399 LEHLAEKFRQKASTHETWAYGKEQILLQKDYESA----SLTEVRALLRKHEAFESDLAAH 454
Query: 168 TTELEMAAYPA--LDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDEL---EQLLDDD 222
+E A A L+EL + DR +K+ RL QK R+ L E+LL+
Sbjct: 455 QDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETI 514
Query: 223 DDMADLYLSRKAGSSSPVSGS 243
D + + R A ++ + G+
Sbjct: 515 DQLHLEFAKRAAPFNNWMEGA 535
>AAC2_CHICK (P20111) Alpha-actinin 2 (Alpha actinin skeletal muscle
isoform 2) (F-actin cross linking protein)
Length = 897
Score = 38.9 bits (89), Expect = 0.023
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 108 VEELQRRLPKVSSLHQQQGDGQEYVSSQHDTEAAEEDESPFEFRALEVALEAICSFLAAR 167
+E L + + +S H+Q G+E + Q D E+A S E RA+ EA S LAA
Sbjct: 402 LEHLAEKFRQKASTHEQWAYGKEQILLQKDYESA----SLTEVRAMLRKHEAFESDLAAH 457
Query: 168 TTELEMAAYPA--LDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDEL---EQLLDDD 222
+E A A L+EL ++ DR +K+ L QK R+ L E+LL+
Sbjct: 458 QDRVEQIAAIAQELNELDYHDAASVNDRCQKICDQWDSLGTLTQKRREALERTEKLLETI 517
Query: 223 DDMADLYLSRKAGSSSPVSGS 243
D + + R A ++ + G+
Sbjct: 518 DQLHLEFAKRAAPFNNWMEGA 538
>SPOF_SCHPO (Q10411) Sporulation-specific protein 15
Length = 1957
Score = 38.5 bits (88), Expect = 0.030
Identities = 30/138 (21%), Positives = 67/138 (47%), Gaps = 13/138 (9%)
Query: 80 LNLEHIKAIITAEEVLLRDPTDENVVPVVEELQRRLPKVSSLHQQQGDGQEYVSSQHDTE 139
L +K T EE+ L + ++ + +LQ ++ +S++ + + S D+
Sbjct: 1596 LGRSKLKLASTTEELQLAENERLSLTTRMLDLQNQVKDLSNIKDSLSEDLRTLRSLEDSV 1655
Query: 140 AAEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKS 199
A+ + E + +E +L+ + + + AR ELE DE+ SR++D++R+
Sbjct: 1656 ASLQKECKIKSNTVE-SLQDVLTSVQARNAELE-------DEV-----SRSVDKIRRRDD 1702
Query: 200 AMTRLTARVQKVRDELEQ 217
L+ +++K+ +LE+
Sbjct: 1703 RCEHLSGKLKKLHSQLEE 1720
>MYSP_ECHGR (P35417) Paramyosin
Length = 863
Score = 38.5 bits (88), Expect = 0.030
Identities = 35/121 (28%), Positives = 56/121 (45%), Gaps = 13/121 (10%)
Query: 108 VEELQRRLPKVSSLHQQ-QGDGQEYVSSQHDTEAAEEDESPFEFRALEVALEAICSFLAA 166
+ + RRL + +L Q + DG S+ HD E A + E ++ A + AL + S +
Sbjct: 428 LRDANRRLTDLEALRSQLEADGDNLASALHDAEEALK-ELEVKYVASQNALNHLKSEMEQ 486
Query: 167 RTTE-------LEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLL 219
R E L + ++ELT+ IS + + KS M+RL + + ELE L
Sbjct: 487 RLREKDEELENLRKSTTRTIEELTTTISEMEV----RFKSDMSRLKKKYEATISELEVQL 542
Query: 220 D 220
D
Sbjct: 543 D 543
>AAC1_CHICK (P05094) Alpha-actinin 1 (Alpha-actinin cytoskeletal
isoform) (Non-muscle alpha-actinin 1) (F-actin cross
linking protein)
Length = 893
Score = 38.5 bits (88), Expect = 0.030
Identities = 42/141 (29%), Positives = 65/141 (45%), Gaps = 9/141 (6%)
Query: 108 VEELQRRLPKVSSLHQQQGDGQEYVSSQHDTEAAEEDESPFEFRALEVALEAICSFLAAR 167
++ L + + +S+H+ DG+E + Q D E A + E +AL EA S LAA
Sbjct: 393 LDHLAEKFRQKASIHESWTDGKEAMLQQKDYETA----TLSEIKALLKKHEAFESDLAAH 448
Query: 168 TTELEMAAYPA--LDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDEL---EQLLDDD 222
+E A A L+EL S R +K+ L A QK R+ L E+LL+
Sbjct: 449 QDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETI 508
Query: 223 DDMADLYLSRKAGSSSPVSGS 243
D + Y R A ++ + G+
Sbjct: 509 DQLYLEYAKRAAPFNNWMEGA 529
>AAC1_RAT (Q9Z1P2) Alpha-actinin 1 (Alpha-actinin cytoskeletal
isoform) (Non-muscle alpha-actinin 1) (F-actin cross
linking protein)
Length = 892
Score = 37.7 bits (86), Expect = 0.051
Identities = 42/141 (29%), Positives = 65/141 (45%), Gaps = 9/141 (6%)
Query: 108 VEELQRRLPKVSSLHQQQGDGQEYVSSQHDTEAAEEDESPFEFRALEVALEAICSFLAAR 167
++ L + + +S+H+ DG+E + Q D E A + E +AL EA S LAA
Sbjct: 392 LDHLAEKFRQKASIHEAWTDGKEAMLRQKDYETA----TLSEIKALLKKHEAFESDLAAH 447
Query: 168 TTELEMAAYPA--LDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDEL---EQLLDDD 222
+E A A L+EL S R +K+ L A QK R+ L E+LL+
Sbjct: 448 QDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETI 507
Query: 223 DDMADLYLSRKAGSSSPVSGS 243
D + Y R A ++ + G+
Sbjct: 508 DQLYLEYAKRAAPFNNWMEGA 528
>AAC1_MOUSE (Q7TPR4) Alpha-actinin 1 (Alpha-actinin cytoskeletal
isoform) (Non-muscle alpha-actinin 1) (F-actin cross
linking protein)
Length = 892
Score = 37.7 bits (86), Expect = 0.051
Identities = 42/141 (29%), Positives = 65/141 (45%), Gaps = 9/141 (6%)
Query: 108 VEELQRRLPKVSSLHQQQGDGQEYVSSQHDTEAAEEDESPFEFRALEVALEAICSFLAAR 167
++ L + + +S+H+ DG+E + Q D E A + E +AL EA S LAA
Sbjct: 392 LDHLAEKFRQKASIHEAWTDGKEAMLRQKDYETA----TLSEIKALLKKHEAFESDLAAH 447
Query: 168 TTELEMAAYPA--LDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDEL---EQLLDDD 222
+E A A L+EL S R +K+ L A QK R+ L E+LL+
Sbjct: 448 QDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETI 507
Query: 223 DDMADLYLSRKAGSSSPVSGS 243
D + Y R A ++ + G+
Sbjct: 508 DQLYLEYAKRAAPFNNWMEGA 528
>AAC1_HUMAN (P12814) Alpha-actinin 1 (Alpha-actinin cytoskeletal
isoform) (Non-muscle alpha-actinin 1) (F-actin cross
linking protein)
Length = 892
Score = 37.7 bits (86), Expect = 0.051
Identities = 42/141 (29%), Positives = 65/141 (45%), Gaps = 9/141 (6%)
Query: 108 VEELQRRLPKVSSLHQQQGDGQEYVSSQHDTEAAEEDESPFEFRALEVALEAICSFLAAR 167
++ L + + +S+H+ DG+E + Q D E A + E +AL EA S LAA
Sbjct: 392 LDHLAEKFRQKASIHEAWTDGKEAMLRQKDYETA----TLSEIKALLKKHEAFESDLAAH 447
Query: 168 TTELEMAAYPA--LDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDEL---EQLLDDD 222
+E A A L+EL S R +K+ L A QK R+ L E+LL+
Sbjct: 448 QDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETI 507
Query: 223 DDMADLYLSRKAGSSSPVSGS 243
D + Y R A ++ + G+
Sbjct: 508 DQLYLEYAKRAAPFNNWMEGA 528
>RA50_METKA (Q8TXI4) DNA double-strand break repair rad50 ATPase
Length = 876
Score = 36.6 bits (83), Expect = 0.11
Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 33/158 (20%)
Query: 109 EELQRRLPKVSSLHQQQGDGQEYVSSQHDTEAAEEDESPFEFRALEV----ALEAICSFL 164
EEL+R+L KVS + GD +E + S+++ DE E + + V LE I S
Sbjct: 367 EELKRKLEKVSDELSELGDREETLQSEYEELQERLDEIQGELKEIRVKEKELLERIESLR 426
Query: 165 AA--------------------RTTELEMAAYPALDELTSKISSRNLDRVRKL------- 197
A R E E+ +E K DR+ +
Sbjct: 427 EAEGECPVCLRKLPRERAEKLLRDAEKELERLQGREEDLRKERRELKDRLESVRRELEGT 486
Query: 198 KSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKAG 235
K M RL R +++ ELE++ + +++AD LSR+ G
Sbjct: 487 KERMWRLRERREELERELEEIEELKEELAD--LSRELG 522
Score = 32.3 bits (72), Expect = 2.1
Identities = 42/208 (20%), Positives = 90/208 (43%), Gaps = 13/208 (6%)
Query: 108 VEELQRRLPKVSSLHQQQGDGQEYVSS-QHDTEAAEEDESPFEFRALEVALEAICSFLAA 166
+EEL+ L + SL + +E + + + E +++ R +E + + +
Sbjct: 301 IEELRNLLDDLRSLRNRLESAEEELEGVKRELEELKDEAGVDPERLVEFKDKIVEASERL 360
Query: 167 RTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMA 226
R E L++++ ++S DR L+S L R+ +++ EL+++ + ++
Sbjct: 361 RDLRREEELKRKLEKVSDELSELG-DREETLQSEYEELQERLDEIQGELKEIRVKEKELL 419
Query: 227 DLYLS-RKAGSSSPVSGSGAANWFGGSPTIGSKISRASRASLATVRFDENDVE----ELE 281
+ S R+A PV K+ R + L ++ E D+ EL+
Sbjct: 420 ERIESLREAEGECPVCLRKLPR------ERAEKLLRDAEKELERLQGREEDLRKERRELK 473
Query: 282 MLLEAYFMQIDGTFNKLTTLREYIDDTE 309
LE+ +++GT ++ LRE ++ E
Sbjct: 474 DRLESVRRELEGTKERMWRLRERREELE 501
>EFER_HUMAN (O75154) Eferin
Length = 756
Score = 36.6 bits (83), Expect = 0.11
Identities = 47/178 (26%), Positives = 69/178 (38%), Gaps = 27/178 (15%)
Query: 62 DPLLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRDPT-------DENVVPVVEELQRR 114
DP PS V H +T E L DP+ +E++ V L+RR
Sbjct: 415 DPAFLTPSPTKRLSSKKVARYLHQSGALTMEA--LEDPSPELMEGPEEDIADKVVFLERR 472
Query: 115 LPKVSSLHQQQGDG-----QEYVSSQHDTEAAEEDESPFEFRALEVALEA-------ICS 162
+ ++ G+ QE + H A EE E RA E+ LE +C
Sbjct: 473 VLELEKDTAATGEQHSRLRQENLQLVHRANALEEQLKEQELRACEMVLEETRRQKELLCK 532
Query: 163 FLAARTTELE--MAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQL 218
++ E+E LDE S++ S LK+ + RL QK+ DE+E L
Sbjct: 533 MEREKSIEIENLQTRLQQLDEENSELRSCT----PCLKANIERLEEEKQKLLDEIESL 586
>GLMS_COREF (Q8FNH2) Glucosamine--fructose-6-phosphate
aminotransferase [isomerizing] (EC 2.6.1.16)
(Hexosephosphate aminotransferase)
(D-fructose-6-phosphate amidotransferase) (GFAT)
(L-glutamine-D-fructose-6-phosphate amidotransferase)
(Glucosamine-6-ph
Length = 622
Score = 36.2 bits (82), Expect = 0.15
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 16/164 (9%)
Query: 91 AEEVLLRDP--TDENVVPVVEELQRRLPKVSSLHQQQGDGQEYVS---SQHDTEAAEEDE 145
A E RDP ++ +V + + + + ++ + G + V+ + T E D
Sbjct: 337 AHEFRYRDPIVNEKTLVVALSQSGETMDTLMAVRHAREQGAKVVAICNTVGSTLPREADA 396
Query: 146 SPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLT 205
+ + E+A+ + +FLA T + Y L ++ D VR + ++ +
Sbjct: 397 CLYTYAGPEIAVASTKAFLAQITASYLLGLY-----LAQLRGNKFADEVRVILDSLREMP 451
Query: 206 ARVQKVRDELEQLLDDDDDMAD----LYLSRKAGSSSPVSGSGA 245
A++Q+V D EQ+ M D L+L R G PV+ GA
Sbjct: 452 AKIQEVIDNEEQIKQLGRSMVDAKSVLFLGRHVG--YPVALEGA 493
>CALB_PSEUH (O86447) Coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
(CALDH)
Length = 480
Score = 35.4 bits (80), Expect = 0.25
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 7/122 (5%)
Query: 102 ENVVPVVEELQRRLPKVSSLHQQQGDGQEYVSSQHDTEAAEEDESPFEFRALEVALEAIC 161
+N+VPV EL + P + S D + V + A + +P E +L++
Sbjct: 212 DNLVPVTLELGGKSPVIVSRSADMADVAQRVLTVKTFNAGQICLAPDYVLLPEESLDSF- 270
Query: 162 SFLAARTTELEMAAYPAL---DELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQL 218
A T A YP+L + TS I++RN DR+ + + RV ++ E+L
Sbjct: 271 ---VAEATRFVAAMYPSLLDNPDYTSIINARNFDRLHRYLTDAQAKGGRVIEINPAAEEL 327
Query: 219 LD 220
D
Sbjct: 328 GD 329
>GOA4_HUMAN (Q13439) Golgi autoantigen, golgin subfamily A member 4
(Trans-Golgi p230) (256 kDa golgin) (Golgin-245) (72.1
protein)
Length = 2230
Score = 35.0 bits (79), Expect = 0.33
Identities = 30/127 (23%), Positives = 63/127 (48%), Gaps = 9/127 (7%)
Query: 107 VVEELQRRLPKVSSLHQQQGDGQEYVSSQHDTEAAEEDESPFEFRAL--EVALEA-IC-- 161
+ EE +R++ +++S + + + + S H+ ++ EF+ L E+A++ IC
Sbjct: 1163 LAEEDKRKVSELTSKLKTTDEEFQSLKSSHEKSNKSLEDKSLEFKKLSEELAIQLDICCK 1222
Query: 162 ---SFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQL 218
+ L A+T EL + + + S+IS R K+K A+ T V ++ +L QL
Sbjct: 1223 KTEALLEAKTNELINISSSKTNAILSRISHCQ-HRTTKVKEALLIKTCTVSELEAQLRQL 1281
Query: 219 LDDDDDM 225
++ + +
Sbjct: 1282 TEEQNTL 1288
>AAC3_HUMAN (Q08043) Alpha-actinin 3 (Alpha actinin skeletal muscle
isoform 3) (F-actin cross linking protein)
Length = 901
Score = 34.7 bits (78), Expect = 0.43
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 16/149 (10%)
Query: 108 VEELQRRLPKVSSLHQQQGDGQEYVSSQHDTEAAEEDESPFEFRALEVALEAICSFLAAR 167
++ L + + +SLH+ G+E + SQ D ++A E RAL EA S LAA
Sbjct: 406 LQHLAEKFRQKASLHEAWTRGKEEMLSQRDYDSALLQ----EVRALLRRHEAFESDLAAH 461
Query: 168 TTELEMAAYPA--LDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQL--LDDDD 223
+E A A L+EL ++ R + + L QK RD LE++ L +
Sbjct: 462 QDRVEHIAALAQELNELDYHEAASVNSRCQAICDQWDNLGTLTQKRRDALERMEKLLETI 521
Query: 224 DMADLYLSRKAGSSSPVSGSGAANWFGGS 252
D L +R+A + NW G+
Sbjct: 522 DQLQLEFARRAAPFN--------NWLDGA 542
>CE29_BOVIN (Q9TU23) Centrosomal protein Cep290
Length = 1453
Score = 34.3 bits (77), Expect = 0.56
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 99 PTDENVVPVVEELQRRLPKVSSLHQQQGDGQEYVSSQHDTEAAEEDESPFEFRALEVALE 158
P +N ++EELQ+++ K+ S +++ D E + + A EE E + + +E
Sbjct: 944 PLIDNKQSLIEELQKKIKKLESQLERKVDEAE-MKPMKEKSAREEVIRWEEGKKWQTKIE 1002
Query: 159 AICSFLAARTTELEMAA--YPALDELTSKISSRNLDRVRKLKSAMTR----LTARVQKVR 212
I + L + E+ + L +L +K L RKLK+ + ARV +
Sbjct: 1003 GIRNKLKEKEGEVYILTKQLTTLKDLFAKADKEKLTLQRKLKTTGLTVDQVMAARVLESE 1062
Query: 213 DELEQL----LDDDDDMA 226
ELE+L LD ++D++
Sbjct: 1063 KELEELKKRNLDLENDIS 1080
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.134 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,785,343
Number of Sequences: 164201
Number of extensions: 1807091
Number of successful extensions: 6828
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 6781
Number of HSP's gapped (non-prelim): 124
length of query: 393
length of database: 59,974,054
effective HSP length: 112
effective length of query: 281
effective length of database: 41,583,542
effective search space: 11684975302
effective search space used: 11684975302
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0071.7