Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0051b.2
         (276 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

PORI_PEA (P42054) Outer plastidial membrane protein porin (Volta...   462  e-130
POR4_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein ...   448  e-126
POR6_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein ...   442  e-124
POR1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1...   421  e-117
POR2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2...   392  e-109
POR1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin (...   379  e-105
POR1_WHEAT (P46274) Outer mitochondrial membrane protein porin (...   363  e-100
PORI_MAIZE (P42057) Outer plastidial membrane protein porin (Vol...   340  2e-93
POR2_XENLA (P81004) Voltage-dependent anion-selective channel pr...   102  8e-22
PORI_DROME (Q94920) Voltage-dependent anion-selective channel (P...   100  4e-21
POR2_MELGA (P82013) Voltage-dependent anion-selective channel pr...    96  1e-19
POR2_RABIT (P68003) Voltage-dependent anion-selective channel pr...    91  4e-18
POR2_BOVIN (P68002) Voltage-dependent anion-selective channel pr...    91  4e-18
POR2_RAT (P81155) Voltage-dependent anion-selective channel prot...    87  3e-17
POR2_MOUSE (Q60930) Voltage-dependent anion-selective channel pr...    87  3e-17
PORI_CAEEL (Q21752) Probable voltage-dependent anion-selective c...    86  1e-16
POR2_HUMAN (P45880) Voltage-dependent anion-selective channel pr...    86  1e-16
POR1_RAT (Q9Z2L0) Voltage-dependent anion-selective channel prot...    81  2e-15
POR1_MOUSE (Q60932) Voltage-dependent anion-selective channel pr...    81  2e-15
POR3_RABIT (Q9TT13) Voltage-dependent anion-selective channel pr...    80  7e-15

>PORI_PEA (P42054) Outer plastidial membrane protein porin
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 275

 Score =  462 bits (1188), Expect = e-130
 Identities = 224/274 (81%), Positives = 252/274 (91%)

Query: 3   KGPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQLKN 62
           KGPGLYTDIGKKARDLL+KDYHSD+KFTI+T+SPTGVAITSSGTKKGELF+ DVNTQLKN
Sbjct: 2   KGPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKN 61

Query: 63  KNITTDIKVDTDSNLFTTIAVNDPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSSIG 122
           KNITTDIKVDT+SNLFTTI VN+PAPG+KAI SFKVP+Q SGKVELQYLH+YAGISSS+G
Sbjct: 62  KNITTDIKVDTNSNLFTTITVNEPAPGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVG 121

Query: 123 LTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGDAL 182
           L ANPIVNFS VIGTN LA GAD++FDTK+GELTKSNA ++F KDDLI +LTLN+KGD L
Sbjct: 122 LKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTLNEKGDLL 181

Query: 183 NASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASALIQ 242
           +ASYYH ++PL+NTAVG +++HRFST ENT TLGTQHALDPLTT+K RV N GKASALIQ
Sbjct: 182 SASYYHAINPLSNTAVGVDISHRFSTKENTFTLGTQHALDPLTTVKGRVTNSGKASALIQ 241

Query: 243 HEWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
           HEWRPKS  TIS EVDTKAIEKSAK+GL+LALKP
Sbjct: 242 HEWRPKSLITISSEVDTKAIEKSAKIGLSLALKP 275


>POR4_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein
           porin (Voltage-dependent anion-selective channel
           protein) (VDAC) (POM 34)
          Length = 275

 Score =  448 bits (1153), Expect = e-126
 Identities = 213/274 (77%), Positives = 249/274 (90%)

Query: 3   KGPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQLKN 62
           KGPGLYT+IGKKARDLL+KDY SD KF+ITT+SPTGV ITSSG+KKG+LF+ADVNTQLKN
Sbjct: 2   KGPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKN 61

Query: 63  KNITTDIKVDTDSNLFTTIAVNDPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSSIG 122
           KN+TTDIKVDT+SNLFTTI V++ APGLK I SF+VPDQRSGK+E+QYLHDYAGI +S+G
Sbjct: 62  KNVTTDIKVDTNSNLFTTITVDEAAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVG 121

Query: 123 LTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGDAL 182
           LTANPIVNFSGV+GTN++ALG D++FDTK G+ TK NAGLSFT  DL+A+L LN+KGD L
Sbjct: 122 LTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNL 181

Query: 183 NASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASALIQ 242
            ASYYH VSPLT+TAVGAEV H FSTNEN +T+GTQH LDPLT++KAR+NNFGKASAL+Q
Sbjct: 182 TASYYHTVSPLTSTAVGAEVNHSFSTNENIITVGTQHRLDPLTSVKARINNFGKASALLQ 241

Query: 243 HEWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
           HEWRPKS FT+SGEVDTK+++K AK GLALALKP
Sbjct: 242 HEWRPKSLFTVSGEVDTKSVDKGAKFGLALALKP 275


>POR6_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein
           porin (Voltage-dependent anion-selective channel
           protein) (VDAC) (POM 36)
          Length = 275

 Score =  442 bits (1138), Expect = e-124
 Identities = 213/274 (77%), Positives = 249/274 (90%)

Query: 3   KGPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQLKN 62
           KGPGLY+DIGKKARDLL++DY SD KFT+TT+S TGVAIT+SG KKGELF+ADV+TQLKN
Sbjct: 2   KGPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKN 61

Query: 63  KNITTDIKVDTDSNLFTTIAVNDPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSSIG 122
           KNITTD+KVDT+SN++TTI V++PAPGLK IFSF VPDQ+SGKVELQYLH+YAGI++SIG
Sbjct: 62  KNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIG 121

Query: 123 LTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGDAL 182
           LTA+P+VNFSGV G N +ALG DL+FDT  G  TK NAGLSF+  DLIA+L LNDKGD +
Sbjct: 122 LTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTV 181

Query: 183 NASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASALIQ 242
           +ASYYH V P+TNTAVGAE+TH FS+NENTLT+GTQH LDPLTT+KARVN++GKASALIQ
Sbjct: 182 SASYYHTVKPVTNTAVGAELTHSFSSNENTLTIGTQHLLDPLTTVKARVNSYGKASALIQ 241

Query: 243 HEWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
           HEWRPKS FTISGEVDT+AIEKSAK+GLA+ALKP
Sbjct: 242 HEWRPKSLFTISGEVDTRAIEKSAKIGLAVALKP 275


>POR1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1
           (Voltage-dependent anion-selective channel protein 1)
           (VDAC 1)
          Length = 275

 Score =  421 bits (1081), Expect = e-117
 Identities = 205/274 (74%), Positives = 245/274 (88%)

Query: 3   KGPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQLKN 62
           KGPGLYT+IGKKARDLL+KD++SDQKF+ITTFSP GVAITS+GTKKG+L + DV  Q + 
Sbjct: 2   KGPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRR 61

Query: 63  KNITTDIKVDTDSNLFTTIAVNDPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSSIG 122
           KNITTD+KV TDS    T  V++ APGL++IFSFKVPDQ SGKVELQYLH+YAGIS+S+G
Sbjct: 62  KNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMG 121

Query: 123 LTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGDAL 182
           LT NP VNFSGVIG+NVLA+G D++FDTK G  TK NAGLSFTK+DLIA+LT+NDKGD L
Sbjct: 122 LTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLL 181

Query: 183 NASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASALIQ 242
           NASYYH+V+PL NTAVGAEV+H+ S+ ++T+T+GTQH+LDPLT++KARVN+ G ASALIQ
Sbjct: 182 NASYYHIVNPLFNTAVGAEVSHKLSSKDSTITVGTQHSLDPLTSVKARVNSAGIASALIQ 241

Query: 243 HEWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
           HEW+PKSFFTISGEVDTK+I+KSAKVGLALALKP
Sbjct: 242 HEWKPKSFFTISGEVDTKSIDKSAKVGLALALKP 275


>POR2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2
           (Voltage-dependent anion-selective channel protein 2)
           (VDAC 2)
          Length = 273

 Score =  392 bits (1008), Expect = e-109
 Identities = 187/274 (68%), Positives = 229/274 (83%), Gaps = 2/274 (0%)

Query: 3   KGPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQLKN 62
           KGPGLYT+IGKKARDLL++DY  DQKF++TT+S TGVAIT++GT KG LF+ DV TQ+KN
Sbjct: 2   KGPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKN 61

Query: 63  KNITTDIKVDTDSNLFTTIAVNDPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSSIG 122
            N T D+KV TDS+L TT+  ++PAPGLK I   K+PD +SGK E+QY HDYAGIS+S+G
Sbjct: 62  NNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVG 121

Query: 123 LTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGDAL 182
            TA PIVNFSGV+GTN L+LG D+ ++T+ G     NAG +FTKDDL A+L LNDKG+ L
Sbjct: 122 FTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKL 181

Query: 183 NASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASALIQ 242
           NASYY +VSP  +T VGAE++H F+T EN +T+GTQHALDPLTT+KARVNN G A+ALIQ
Sbjct: 182 NASYYQIVSP--STVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANALIQ 239

Query: 243 HEWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
           HEWRPKSFFT+SGEVD+KAI+KSAKVG+ALALKP
Sbjct: 240 HEWRPKSFFTVSGEVDSKAIDKSAKVGIALALKP 273


>POR1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 274

 Score =  379 bits (972), Expect = e-105
 Identities = 182/273 (66%), Positives = 228/273 (82%), Gaps = 1/273 (0%)

Query: 4   GPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQLKNK 63
           GPGLY +IGKKARDLL++DY +D KFT+TT++  GVAIT++ TKK +L   ++ +Q+KNK
Sbjct: 3   GPGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNK 62

Query: 64  NITTDIKVDTDSNLFTTIAVNDPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSSIGL 123
           NIT D+K ++DSN+ TT+ V++  PGLK+I SF VPDQRSGK ELQY HDYAG+S+SIGL
Sbjct: 63  NITVDVKANSDSNVVTTVTVDELTPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGL 122

Query: 124 TANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGDALN 183
           TA+P+VN S V GT  LA+GAD++ DT  G LTK NAGLSF+ DDLIA+L LN+KGD+L 
Sbjct: 123 TASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNLNNKGDSLT 182

Query: 184 ASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASALIQH 243
           ASYYH+V+  + TAVGAE+TH FS+NEN+LT GTQH LDPLT +KAR NN GKASAL+QH
Sbjct: 183 ASYYHIVNH-SATAVGAELTHSFSSNENSLTFGTQHTLDPLTVVKARFNNSGKASALLQH 241

Query: 244 EWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
           EWRPKS +TIS EVDTKAI+KS+KVG+A+ALKP
Sbjct: 242 EWRPKSVWTISAEVDTKAIDKSSKVGIAVALKP 274


>POR1_WHEAT (P46274) Outer mitochondrial membrane protein porin
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 275

 Score =  363 bits (931), Expect = e-100
 Identities = 179/274 (65%), Positives = 222/274 (80%), Gaps = 2/274 (0%)

Query: 4   GPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQLKNK 63
           GPGLY+ IGKKA+DLL++DY +D KFT+TT++  G AIT++ TKK +L V ++ +Q+KNK
Sbjct: 3   GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNK 62

Query: 64  NITTDIKVDTDSNLFTTIAVND-PAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSSIG 122
           NIT D+K ++ SN+ TTI  +D  APGLK I SF VPDQ+SGKVELQYLHDYAGI++SIG
Sbjct: 63  NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 122

Query: 123 LTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGDAL 182
           LTANP+VN SG  GT+ LA+GAD++ DT      K NA LS+T  DLIA+L LN+KGD+L
Sbjct: 123 LTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSL 182

Query: 183 NASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASALIQ 242
            ASYYH+V   + TAVGAE+TH FS+NEN+LT GTQH LDPLT +KAR+NN GKASALIQ
Sbjct: 183 TASYYHIVEK-SGTAVGAELTHSFSSNENSLTFGTQHTLDPLTLVKARINNSGKASALIQ 241

Query: 243 HEWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
           HE+ PKS  TIS EVDTKAIEKS+KVG+A+ALKP
Sbjct: 242 HEFMPKSLCTISAEVDTKAIEKSSKVGIAIALKP 275


>PORI_MAIZE (P42057) Outer plastidial membrane protein porin
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 277

 Score =  340 bits (873), Expect = 2e-93
 Identities = 165/276 (59%), Positives = 214/276 (76%), Gaps = 1/276 (0%)

Query: 1   MAKGPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQL 60
           M    GLYTDIGKK RDLL+KDY++ QKF +TT SP GVAIT++GT+K E    +++TQ+
Sbjct: 1   MVVAVGLYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQI 60

Query: 61  KNKNITTDIKVDTDSNLFTTIAVND-PAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISS 119
           KNK +T D+K +++S+L TTI V++   PGLK+I +  VPDQRSGK+E QYLH+YAG+++
Sbjct: 61  KNKKLTVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNA 120

Query: 120 SIGLTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKG 179
           S+GL +NP+VN SG  G+  L++G D++FDT   + TK NA LS T  DLIA+L LN+ G
Sbjct: 121 SVGLNSNPMVNLSGAFGSKALSVGVDVSFDTATSDFTKYNAALSLTSPDLIASLHLNNHG 180

Query: 180 DALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASA 239
           D L ASYYH+V   + TAVGAE++H  S NE+TL  G+QH+LDP TT+K R NN+G ASA
Sbjct: 181 DTLVASYYHLVKNHSGTAVGAELSHSMSRNESTLIFGSQHSLDPHTTIKTRFNNYGMASA 240

Query: 240 LIQHEWRPKSFFTISGEVDTKAIEKSAKVGLALALK 275
           L+QHEWRPKSF TISG+VDTKAIEKS KVGL+L LK
Sbjct: 241 LVQHEWRPKSFVTISGDVDTKAIEKSTKVGLSLVLK 276


>POR2_XENLA (P81004) Voltage-dependent anion-selective channel
           protein 2 (Outer mitochondrial membrane protein porin)
          Length = 282

 Score =  102 bits (255), Expect = 8e-22
 Identities = 87/282 (30%), Positives = 123/282 (42%), Gaps = 14/282 (4%)

Query: 5   PGLYTDIGKKARDLLFKDYHSDQ-KFTITTFSPTGVAITSSGTKKGELFVADVNTQLKNK 63
           P  Y D+GK ARD+  K Y     K  + T S TGV  T+SGT   +    + + + K K
Sbjct: 3   PPSYADLGKSARDIFNKGYGFGLVKLDVKTKSATGVEFTTSGTSNTDSGKVNGSLETKYK 62

Query: 64  ----NITTDIKVDTDSNLFTTIAVNDP-APGLKAIFSFKVPD---QRSGKVELQYLHDYA 115
                +T   K +TD+ L T IA+ D  A GLK  F         ++SGKV+  Y  +Y 
Sbjct: 63  WGEYGLTFTEKWNTDNTLGTEIAIEDQIAKGLKLTFDTTFSPNTGKKSGKVKAAYKQEYV 122

Query: 116 GISSSIGLT-ANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALT 174
            +   +    A P ++ S V+G      G  +TFD+   +LTK+N  + +   D      
Sbjct: 123 NLGCDVDFDFAGPAIHGSAVVGYEGWLAGYQMTFDSAKSKLTKNNFAVGYKTGDFQLHTN 182

Query: 175 LNDKGDALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNF 234
           +ND G     S Y  VS    TAV    T     N     +  ++ LD    + A+VNN 
Sbjct: 183 VND-GSEFAGSIYQKVSDKMETAVNLAWTS--GNNSTRFGIAAKYQLDSHAAISAKVNNS 239

Query: 235 GKASALIQHEWRPKSFFTISGEVDTKAIEKSA-KVGLALALK 275
                      RP    T+S  VD K I     K+GL L L+
Sbjct: 240 SLVGVGYTQTLRPGVKLTLSALVDGKNINAGGHKLGLGLELE 281


>PORI_DROME (Q94920) Voltage-dependent anion-selective channel
           (Porin protein) (DmVDAC)
          Length = 281

 Score =  100 bits (249), Expect = 4e-21
 Identities = 77/282 (27%), Positives = 136/282 (47%), Gaps = 14/282 (4%)

Query: 5   PGLYTDIGKKARDLLFKDYHSDQ-KFTITTFSPTGVAITSSG---TKKGELFVA-DVNTQ 59
           P  Y+D+GK+ARD+  K Y+    K  + T + +G+   ++G    + G++F + +   +
Sbjct: 2   PPSYSDLGKQARDIFSKGYNFGLWKLDLKTKTSSGIEFNTAGHSNQESGKVFGSLETKYK 61

Query: 60  LKNKNITTDIKVDTDSNLFTTIAVNDPA-PGLKAIFSFKVPDQ---RSGKVELQYLHDYA 115
           +K+  +T   K +TD+ LFT +AV D    GLK         Q   ++GK ++ Y H+  
Sbjct: 62  VKDYGLTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENV 121

Query: 116 GISSSIGLTAN-PIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALT 174
              S + +    P++N S V+G      G    FDT+  +LT +N  L +T  D +    
Sbjct: 122 KADSDVNIDLKGPLINASAVLGYQGWLAGYQTAFDTQQSKLTTNNFALGYTTKDFVLHTA 181

Query: 175 LNDKGDALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNF 234
           +ND G   + S +   S   +  VG +++    T+     +G ++ LD   +++A+VNN 
Sbjct: 182 VND-GQEFSGSIFQRTSDKLD--VGVQLSWASGTSNTKFAIGAKYQLDDDASVRAKVNNA 238

Query: 235 GKASALIQHEWRPKSFFTISGEVDTKAIEKSA-KVGLALALK 275
            +     Q + R     T+S  VD K       K+G+ L L+
Sbjct: 239 SQVGLGYQQKLRDGVTLTLSTLVDGKNFNAGGHKIGVGLELE 280


>POR2_MELGA (P82013) Voltage-dependent anion-selective channel
           protein 2 (VDAC-2) (Outer mitochondrial membrane protein
           porin 2)
          Length = 282

 Score = 95.9 bits (237), Expect = 1e-19
 Identities = 83/284 (29%), Positives = 124/284 (43%), Gaps = 18/284 (6%)

Query: 5   PGLYTDIGKKARDLLFKDYHSDQ-KFTITTFSPTGVAITSSGTKKGELFVADVNTQLKNK 63
           P  Y D+GK ARD+  K Y     K  + T S +GV  T+SG+   +     VN  L+ K
Sbjct: 3   PPSYADLGKSARDIFNKGYGFGLVKLDVKTKSASGVEFTTSGSSNTD--TGKVNGSLETK 60

Query: 64  ------NITTDIKVDTDSNLFTTIAVNDP-APGLKAIFSFKVPD---QRSGKVELQYLHD 113
                  +T   K +TD+ L T IA+ D  A GLK  F         ++SGK++  Y  +
Sbjct: 61  YKWAEYGLTFTEKWNTDNTLGTEIAIEDQIAKGLKLTFDTTFSPNTGKKSGKIKSAYKRE 120

Query: 114 YAGISSSIGLT-ANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAA 172
              +   +    A P ++ S V G      G  +TFD+   +LT++N  + +   D    
Sbjct: 121 CLNLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFSVGYKTGDFQLH 180

Query: 173 LTLNDKGDALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVN 232
             +ND G     S Y  VS    TAV    T    +N     +  ++ LD   ++ A+VN
Sbjct: 181 TNVND-GSEFGGSIYQKVSDNLETAVNLAWT--AGSNSTRFGIAAKYKLDSTASISAKVN 237

Query: 233 NFGKASALIQHEWRPKSFFTISGEVDTKAIEKSA-KVGLALALK 275
           N            RP    T+S  +D K+I     K+GL L L+
Sbjct: 238 NSSLVGVGYTQTLRPGVKLTLSALIDGKSINAGGHKLGLGLELE 281


>POR2_RABIT (P68003) Voltage-dependent anion-selective channel
           protein 2 (Outer mitochondrial membrane protein porin 2)
          Length = 294

 Score = 90.5 bits (223), Expect = 4e-18
 Identities = 80/282 (28%), Positives = 123/282 (43%), Gaps = 14/282 (4%)

Query: 5   PGLYTDIGKKARDLLFKDYHSDQ-KFTITTFSPTGVAITSSGTKKGELFVADVNTQLKNK 63
           P  Y D+GK ARD+  K +     K  + T S +GV  ++SG+   +        + K K
Sbjct: 15  PPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKVTGTLETKYK 74

Query: 64  ----NITTDIKVDTDSNLFTTIAVNDP-APGLKAIFSFKVPD---QRSGKVELQYLHDYA 115
                +T   K +TD+ L T IA+ D    GLK  F         ++SGK++  Y  +  
Sbjct: 75  WCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSSYKRECI 134

Query: 116 GISSSIGLT-ANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALT 174
            +   +    A P ++ S V G      G  +TFD+   +LT++N  + +   D      
Sbjct: 135 NLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGDFQLHTN 194

Query: 175 LNDKGDALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNF 234
           +ND G     S Y  V    +T+V    T    TN     +  ++ LDP  ++ A+VNN 
Sbjct: 195 VND-GTEFGGSIYQKVCEDLDTSVNLAWTS--GTNCTRFGIAAKYQLDPTASISAKVNNS 251

Query: 235 GKASALIQHEWRPKSFFTISGEVDTKAIEKSA-KVGLALALK 275
                      RP    T+S  VD K+I     K+GLAL L+
Sbjct: 252 SLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKLGLALELE 293


>POR2_BOVIN (P68002) Voltage-dependent anion-selective channel
           protein 2 (Outer mitochondrial membrane protein porin 2)
          Length = 294

 Score = 90.5 bits (223), Expect = 4e-18
 Identities = 80/282 (28%), Positives = 123/282 (43%), Gaps = 14/282 (4%)

Query: 5   PGLYTDIGKKARDLLFKDYHSDQ-KFTITTFSPTGVAITSSGTKKGELFVADVNTQLKNK 63
           P  Y D+GK ARD+  K +     K  + T S +GV  ++SG+   +        + K K
Sbjct: 15  PPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKVTGTLETKYK 74

Query: 64  ----NITTDIKVDTDSNLFTTIAVNDP-APGLKAIFSFKVPD---QRSGKVELQYLHDYA 115
                +T   K +TD+ L T IA+ D    GLK  F         ++SGK++  Y  +  
Sbjct: 75  WCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSSYKRECI 134

Query: 116 GISSSIGLT-ANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALT 174
            +   +    A P ++ S V G      G  +TFD+   +LT++N  + +   D      
Sbjct: 135 NLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGDFQLHTN 194

Query: 175 LNDKGDALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNF 234
           +ND G     S Y  V    +T+V    T    TN     +  ++ LDP  ++ A+VNN 
Sbjct: 195 VND-GTEFGGSIYQKVCEDLDTSVNLAWTS--GTNCTRFGIAAKYQLDPTASISAKVNNS 251

Query: 235 GKASALIQHEWRPKSFFTISGEVDTKAIEKSA-KVGLALALK 275
                      RP    T+S  VD K+I     K+GLAL L+
Sbjct: 252 SLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKLGLALELE 293


>POR2_RAT (P81155) Voltage-dependent anion-selective channel protein
           2 (VDAC-2) (Outer mitochondrial membrane protein porin
           2) (B36-VDAC)
          Length = 295

 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 79/282 (28%), Positives = 122/282 (43%), Gaps = 14/282 (4%)

Query: 5   PGLYTDIGKKARDLLFKDYHSDQ-KFTITTFSPTGVAITSSGTKKGELFVADVNTQLKNK 63
           P  Y D+GK ARD+  K +     K  + T S +GV  ++SG+   +        + K K
Sbjct: 16  PPPYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKVSGTLETKYK 75

Query: 64  ----NITTDIKVDTDSNLFTTIAVNDP-APGLKAIFSFKVPD---QRSGKVELQYLHDYA 115
                +T   K +TD+ L T IA+ D    GLK  F         ++SGK++  Y  +  
Sbjct: 76  WCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSAYKRECI 135

Query: 116 GISSSIGLT-ANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALT 174
            +   +    A P ++ S V G      G  +TFD+   +LT+SN  + +   D      
Sbjct: 136 NLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRSNFAVGYRTGDFQLHTN 195

Query: 175 LNDKGDALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNF 234
           +N+ G     S Y  V    +T+V    T    TN     +  ++ LDP  ++ A+VNN 
Sbjct: 196 VNN-GTEFGGSIYQKVCEDFDTSVNLAWTS--GTNCTRFGIAAKYQLDPTASISAKVNNS 252

Query: 235 GKASALIQHEWRPKSFFTISGEVDTKAIEKSA-KVGLALALK 275
                      RP    T+S  VD K+      K+GLAL L+
Sbjct: 253 SLIGVGYTQTLRPGVKLTLSALVDGKSFNAGGHKLGLALELE 294


>POR2_MOUSE (Q60930) Voltage-dependent anion-selective channel
           protein 2 (VDAC-2) (mVDAC2) (mVDAC6) (Outer
           mitochondrial membrane protein porin 2)
          Length = 295

 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 79/282 (28%), Positives = 122/282 (43%), Gaps = 14/282 (4%)

Query: 5   PGLYTDIGKKARDLLFKDYHSDQ-KFTITTFSPTGVAITSSGTKKGELFVADVNTQLKNK 63
           P  Y D+GK ARD+  K +     K  + T S +GV  ++SG+   +        + K K
Sbjct: 16  PPPYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKVSGTLETKYK 75

Query: 64  ----NITTDIKVDTDSNLFTTIAVNDP-APGLKAIFSFKVPD---QRSGKVELQYLHDYA 115
                +T   K +TD+ L T IA+ D    GLK  F         ++SGK++  Y  +  
Sbjct: 76  WCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSAYKRECI 135

Query: 116 GISSSIGLT-ANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALT 174
            +   +    A P ++ S V G      G  +TFD+   +LT+SN  + +   D      
Sbjct: 136 NLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRSNFAVGYRTGDFQLHTN 195

Query: 175 LNDKGDALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNF 234
           +N+ G     S Y  V    +T+V    T    TN     +  ++ LDP  ++ A+VNN 
Sbjct: 196 VNN-GTEFGGSIYQKVCEDFDTSVNLAWTS--GTNCTRFGIAAKYQLDPTASISAKVNNS 252

Query: 235 GKASALIQHEWRPKSFFTISGEVDTKAIEKSA-KVGLALALK 275
                      RP    T+S  VD K+      K+GLAL L+
Sbjct: 253 SLIGVGYTQTLRPGVKLTLSALVDGKSFNAGGHKLGLALELE 294


>PORI_CAEEL (Q21752) Probable voltage-dependent anion-selective
           channel
          Length = 283

 Score = 85.9 bits (211), Expect = 1e-16
 Identities = 80/287 (27%), Positives = 128/287 (43%), Gaps = 23/287 (8%)

Query: 5   PGLYTDIGKKARDLLFKDYHSD-QKFTITT---------FSPTGVAITSSGTKKGELFVA 54
           P  + D+GK A+DL  K Y+    K   TT         F         SG   G L   
Sbjct: 3   PPTFADLGKSAKDLFNKGYNFGFLKIDSTTRAGDNKEVEFKSAASHNIGSGKLGGNL--- 59

Query: 55  DVNTQLKNKNITTDIKVDTDSNLFTTIAVNDP-APGLKAIF-SFKVPD--QRSGKVELQY 110
           DV  ++    IT   K +T++ L T I VN+    GLK    S   P   +RSGKV+L +
Sbjct: 60  DVKYKIPQYGITLTEKWNTENQLGTVIEVNEQFGRGLKVTLDSLYAPHAGKRSGKVKLDW 119

Query: 111 LHDYAGISSSIGLTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSF-TKDDL 169
               A +++ +G+T+ P++N +GV   +   +GA  TFD+   +L  ++      T    
Sbjct: 120 ALPTARVTADVGVTSAPVINAAGVFSRDGWLIGAAATFDSSSNKLAATSLAFGHSTPQYT 179

Query: 170 IAALTLNDKGDALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKA 229
           + +  +N       AS YH V+  +N  VG ++  +   N     L T++A     T++A
Sbjct: 180 LHSFVINSTD--FGASLYHKVA--SNVEVGTQLGWKVGGNGADYALATKYAPSRDLTVRA 235

Query: 230 RVNNFGKASALIQHEWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
           +VN+  + +    H   P    T+S + +  A   + K GL L   P
Sbjct: 236 KVNSSSQVAVAATHSLSPALKLTLSTQFNL-AANDAHKFGLGLEFDP 281


>POR2_HUMAN (P45880) Voltage-dependent anion-selective channel
           protein 2 (VDAC-2) (hVDAC2) (Outer mitochondrial
           membrane protein porin 2)
          Length = 347

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 77/276 (27%), Positives = 118/276 (41%), Gaps = 14/276 (5%)

Query: 5   PGLYTDIGKKARDLLFKDYHSDQ-KFTITTFSPTGVAITSSGTKKGELFVADVNTQLKNK 63
           P  Y D+GK ARD+  K +     K  + T S +GV  ++SG+   +        + K K
Sbjct: 30  PPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKVTGTLETKYK 89

Query: 64  ----NITTDIKVDTDSNLFTTIAVNDP-APGLKAIFSFKVPD---QRSGKVELQYLHDYA 115
                +T   K +TD+ L T IA+ D    GLK  F         ++SGK++  Y  +  
Sbjct: 90  WCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSSYKRECI 149

Query: 116 GISSSIGLT-ANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALT 174
            +   +    A P ++ S V G      G  +TFD+   +LT++N  + +   D      
Sbjct: 150 NLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGDFQLHTN 209

Query: 175 LNDKGDALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNF 234
           +ND G     S Y  V    +T+V    T    TN     +  ++ LDP  ++ A+VNN 
Sbjct: 210 VND-GTEFGGSIYQKVCEDLDTSVNLAWTS--GTNCTRFGIAAKYQLDPTASISAKVNNS 266

Query: 235 GKASALIQHEWRPKSFFTISGEVDTKAIEKSA-KVG 269
                      RP    T+S  VD K+I     KVG
Sbjct: 267 SLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVG 302


>POR1_RAT (Q9Z2L0) Voltage-dependent anion-selective channel protein
           1 (VDAC-1) (rVDAC1) (Outer mitochondrial membrane
           protein porin 1)
          Length = 282

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 78/282 (27%), Positives = 119/282 (41%), Gaps = 20/282 (7%)

Query: 5   PGLYTDIGKKARDLLFKDYHSDQ-KFTITTFSPTGVAITSSGTKKGELFVADVNTQLKNK 63
           P  Y D+GK ARD+  K Y     K  + T S  G+  TSSG+   E     VN  L+ K
Sbjct: 3   PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTE--TTKVNGSLETK 60

Query: 64  ------NITTDIKVDTDSNLFTTIAVNDP-APGLKAIFSFKVPD---QRSGKVELQYLHD 113
                  +T   K +TD+ L T I V D  A GLK  F         +++ K++  Y  +
Sbjct: 61  YRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKRE 120

Query: 114 YAGISSSIGLT-ANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAA 172
           +  +   +    A P +  + V+G      G  + F+T    +T+SN  + +  D+    
Sbjct: 121 HINLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETSKSRVTQSNFAVGYKTDEFQLH 180

Query: 173 LTLNDKGDALNASYYHVVSPLTNTAVGAEVTHRFSTNENT-LTLGTQHALDPLTTLKARV 231
             +ND G     S Y  V+    TAV    T   + N NT   +  ++ +DP     A+V
Sbjct: 181 TNVND-GTEFGGSIYQKVNKKLETAVNLAWT---AGNSNTRFGIAAKYQVDPDACFSAKV 236

Query: 232 NNFGKASALIQHEWRPKSFFTISGEVDTKAIEKSA-KVGLAL 272
           NN            +P    T+S  +D K +     K+GL L
Sbjct: 237 NNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHKLGLGL 278


>POR1_MOUSE (Q60932) Voltage-dependent anion-selective channel
           protein 1 (VDAC-1) (mVDAC1) (mVDAC5) (Outer
           mitochondrial membrane protein porin 1) (Plasmalemmal
           porin)
          Length = 296

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 78/282 (27%), Positives = 119/282 (41%), Gaps = 20/282 (7%)

Query: 5   PGLYTDIGKKARDLLFKDYHSDQ-KFTITTFSPTGVAITSSGTKKGELFVADVNTQLKNK 63
           P  Y D+GK ARD+  K Y     K  + T S  G+  TSSG+   E     VN  L+ K
Sbjct: 17  PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTE--TTKVNGSLETK 74

Query: 64  ------NITTDIKVDTDSNLFTTIAVNDP-APGLKAIFSFKVPD---QRSGKVELQYLHD 113
                  +T   K +TD+ L T I V D  A GLK  F         +++ K++  Y  +
Sbjct: 75  YRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKRE 134

Query: 114 YAGISSSIGLT-ANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAA 172
           +  +   +    A P +  + V+G      G  + F+T    +T+SN  + +  D+    
Sbjct: 135 HINLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETSKSRVTQSNFAVGYKTDEFQLH 194

Query: 173 LTLNDKGDALNASYYHVVSPLTNTAVGAEVTHRFSTNENT-LTLGTQHALDPLTTLKARV 231
             +ND G     S Y  V+    TAV    T   + N NT   +  ++ +DP     A+V
Sbjct: 195 TNVND-GTEFGGSIYQKVNKKLETAVNLAWT---AGNSNTRFGIAAKYQVDPDACFSAKV 250

Query: 232 NNFGKASALIQHEWRPKSFFTISGEVDTKAIEKSA-KVGLAL 272
           NN            +P    T+S  +D K +     K+GL L
Sbjct: 251 NNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHKLGLGL 292


>POR3_RABIT (Q9TT13) Voltage-dependent anion-selective channel
           protein 3 (VDAC-3) (Outer mitochondrial membrane protein
           porin 3)
          Length = 283

 Score = 79.7 bits (195), Expect = 7e-15
 Identities = 82/285 (28%), Positives = 129/285 (44%), Gaps = 26/285 (9%)

Query: 8   YTDIGKKARDLLFKDYHSDQ-KFTITTFSPTGVAITSSGTKKGELFVADVNTQLK----N 62
           Y D+GK A+D+  K Y     K  + T S +GV  ++SG    +   A  N + K    N
Sbjct: 7   YCDLGKAAKDVFNKGYGFGMVKIDLRTKSCSGVEFSTSGHAYTDTGKASGNLETKYKVCN 66

Query: 63  KNITTDIKVDTDSNLFTTIAV-NDPAPGLK-AIFSFKVPD--QRSGKVELQYLHDYAGIS 118
             +T   K +TD+ L T I++ N  A GLK  + +  VP+  ++SGK++  Y  D   + 
Sbjct: 67  YGLTFTQKWNTDNTLGTEISLENKLAEGLKLTLDTIFVPNTGKKSGKLKASYKRDCFSLG 126

Query: 119 SSIGLTANPIVNFSG--VIGTNVLAL-----GADLTFDTKIGELTKSNAGLSFTKDDLIA 171
           S++       ++FSG  + G  VLA      G  ++FDT   +L+++N  L +   D   
Sbjct: 127 SNVD------IDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQL 180

Query: 172 ALTLNDKGDALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARV 231
              +ND G     S Y  V+    T++    T    +N     +  ++ LD  T+L A+V
Sbjct: 181 HTHVND-GTEFGGSIYQKVNEKIETSINLAWTA--GSNNTRFGIAAKYKLDCRTSLSAKV 237

Query: 232 NNFGKASALIQHEWRPKSFFTISGEVDTKAIEKSA-KVGLALALK 275
           NN            RP    T+S  +D K       KVGL   L+
Sbjct: 238 NNASLIGLGYTQTLRPGVKLTLSALIDGKNFNAGGHKVGLGFELE 282


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.314    0.132    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,517,536
Number of Sequences: 164201
Number of extensions: 1242661
Number of successful extensions: 2320
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 2255
Number of HSP's gapped (non-prelim): 45
length of query: 276
length of database: 59,974,054
effective HSP length: 109
effective length of query: 167
effective length of database: 42,076,145
effective search space: 7026716215
effective search space used: 7026716215
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)


Lotus: description of TM0051b.2