BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0048.4
(422 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CV05_HUMAN (Q9Y519) Putative MAP kinase activating protein C22orf5 240 6e-63
YAJ6_SCHPO (Q09906) Hypothetical UPF0206 protein C30D11.06c in c... 147 7e-35
YK31_YEAST (P36142) Hypothetical UPF0206 protein YKR051w 125 2e-28
TR36_MOUSE (Q7TQA8) Putative taste receptor type 2 member 36 (T2... 33 1.8
CYB_GYMTI (P29637) Cytochrome b 33 1.8
CA1G_HUMAN (Q9UMD9) Collagen alpha 1(XVII) chain (Bullous pemphi... 32 3.1
YFGC_SALTY (P66950) Hypothetical protein yfgC precursor 30 8.9
YFGC_SALTI (P66951) Hypothetical protein yfgC precursor 30 8.9
YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-) 30 8.9
HME2_SCHMA (Q26601) Homeobox protein engrailed-like SMOX-2 30 8.9
CYB_TAPTE (O63699) Cytochrome b 30 8.9
>CV05_HUMAN (Q9Y519) Putative MAP kinase activating protein C22orf5
Length = 407
Score = 240 bits (612), Expect = 6e-63
Identities = 132/327 (40%), Positives = 190/327 (57%), Gaps = 23/327 (7%)
Query: 6 PIYLYIVAFLCTIG-----AVSLALLHIYKHLVNYTEPTYQRYIVRIVFMVPVYALMSFL 60
P++L A G A+ + IY HL Y+ P QRYIVRI+F+VP+YA S+L
Sbjct: 38 PVFLMTTAAQAISGFFVWTALLITCHQIYMHLRCYSCPNEQRYIVRILFIVPIYAFDSWL 97
Query: 61 SLVLPASS---IYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRVLKPSWFLMT 117
SL+ + +YF ++R+ YEA VIYNFLSLC ++GG +++ + G+ ++ S T
Sbjct: 98 SLLFFTNDQYYVYFGTVRDCYEALVIYNFLSLCYEYLGGESSIMSEIRGKPIESSCMYGT 157
Query: 118 CCLSPIPLDGRFIRKCKQGGLQFVILKPILVAVTLILYVKGKYKDGNFSPKQSYLYLTII 177
CCL F+R CKQ LQF ++KP++ T++L GKY+DG+F YLY+TII
Sbjct: 158 CCLWGKTYSIGFLRFCKQATLQFCVVKPLMAVSTVVLQAFGKYRDGDFDVTSGYLYVTII 217
Query: 178 YTFSYTMALYALALFYVACKDLLHPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSKFIK- 236
Y S ++ALYAL LFY A ++LL P++PV KF ++KSV+FL++WQG+L+ + K I
Sbjct: 218 YNISVSLALYALFLFYFATRELLSPYSPVLKFFMVKSVIFLSFWQGMLLAILEKCGAIPK 277
Query: 237 ---------DADEAAILQDFIICVEMLVAAVGHFYAFPYKEYAGANIGGVSR-----GFT 282
+ AA QDFIICVEM AA+ +AF YK YA + R +
Sbjct: 278 IHSARVSVGEGTVAAGYQDFIICVEMFFAALALRHAFTYKVYADKRLDAQGRCAPMKSIS 337
Query: 283 ASLGHALMLNDFYHDTVHQFAPTYHDY 309
+SL + +D D +H F+P Y Y
Sbjct: 338 SSLKETMNPHDIVQDAIHNFSPAYQQY 364
>YAJ6_SCHPO (Q09906) Hypothetical UPF0206 protein C30D11.06c in
chromosome I
Length = 426
Score = 147 bits (370), Expect = 7e-35
Identities = 85/255 (33%), Positives = 140/255 (54%), Gaps = 6/255 (2%)
Query: 20 AVSLALLHIYKHLVNYTEPTYQRYIVRIVFMVPVYALMSFLSLVLPASSIYFNSIREVYE 79
A+ L+ + I HL NY +P QR +VRI+ M+ +Y+ +SFLS+ F RE+YE
Sbjct: 16 ALVLSCISIITHLKNYKKPVLQRSVVRILMMIVIYSSVSFLSVYNEKIGSIFEPFREIYE 75
Query: 80 AWVIYNFLSLCLAWVGGPGAVVLSLSGRVLKPSWFLMTCCLSPIPL-DGRFIRKCKQGGL 138
A+ +Y F L + ++GG A V+SL G + +P + + I L D K+G L
Sbjct: 76 AFALYCFFCLLIDYLGGERAAVISLHGHLPRPRLWPLNYLQDDIDLSDPYTFLSIKRGIL 135
Query: 139 QFVILKPILVAVTLILYVKGKYKDGNFSP--KQSYLYLTIIYTFSYTMALYALALFYVAC 196
Q+ LKP LV L+ V G Y D P + L++ ++Y S T++LY+L F+V
Sbjct: 136 QYTWLKPFLVIAVLLTKVTGVY-DREDQPVYASADLWIGLVYNISITLSLYSLTTFWVCL 194
Query: 197 KDLLHPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSKFIKDAD--EAAILQDFIICVEML 254
+ L PF P PKF+ +K+++F +YWQ ++ + + + + Q+ ++C+EM
Sbjct: 195 HEELAPFRPFPKFLSVKAIIFASYWQQTVLSITNWLGLLNGTGWIYSLLNQNVLMCLEMP 254
Query: 255 VAAVGHFYAFPYKEY 269
A+ H+YAF ++Y
Sbjct: 255 FFALSHWYAFRIEDY 269
>YK31_YEAST (P36142) Hypothetical UPF0206 protein YKR051w
Length = 418
Score = 125 bits (315), Expect = 2e-28
Identities = 95/316 (30%), Positives = 152/316 (48%), Gaps = 25/316 (7%)
Query: 8 YLYIVAFLCTIGAVSLALLHIYKHLVNYTEPTYQRYIVRIVFMVPVYALMSFLSLVLP-A 66
+LY +I A ++ I +HL+NY +P QR +RI+ +VP++++ ++ P A
Sbjct: 9 WLYWPCVYSSIIATIISFYTITRHLLNYRKPYEQRLSIRILLLVPIFSVSCASGIIKPEA 68
Query: 67 SSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAV--VLSLSGRVLKPSWFLMTCCLSPI- 123
+ Y + IRE YEA+VIY F + +GG + VLSL+ + L+ PI
Sbjct: 69 AQFYVDPIREFYEAFVIYTFFTFLTLLLGGERNIITVLSLNHAPTRHPIPLIGKICKPID 128
Query: 124 ---PLDGRFIRKCKQGGLQFVILKPILVAVTLILYVKGKYKDGNFSPKQSYLYLTIIYTF 180
P D F++K G LQ+V KP TLI +K F ++L + Y
Sbjct: 129 LSDPFDFLFVKK---GILQYVWFKPFYCFGTLIC---SAWKLPKFE-----IFLNVFYNI 177
Query: 181 SYTMALYALALFYVACKDLLHPFNPVPKFIIIKSVVFLTYWQGV----LVFLAAKSKFIK 236
S T +LY+LALF+ L P+ P KF+ +K ++F +YWQ + LV +
Sbjct: 178 SVTWSLYSLALFWKCLYPELTPYKPWLKFLCVKLIIFASYWQSIIIQGLVVTGKLGTGNQ 237
Query: 237 DADEAAILQDFIICVEMLVAAVGHFYAFPYKEYAGANIG-GVSRGFTASLGHALMLNDFY 295
D + ++ ++C+EM+ A+ H AFP+ +Y +I G F +L L D
Sbjct: 238 DRTSGYVYKNGLLCIEMVPFAILHAVAFPWNKYTAFSIPYGARMKFIYALKDFLGCGDLI 297
Query: 296 HDTVHQF--APTYHDY 309
D P Y++Y
Sbjct: 298 WDFKQTLFAGPLYYNY 313
>TR36_MOUSE (Q7TQA8) Putative taste receptor type 2 member 36
(T2R36) (mT2r52)
Length = 305
Score = 32.7 bits (73), Expect = 1.8
Identities = 42/216 (19%), Positives = 85/216 (38%), Gaps = 47/216 (21%)
Query: 11 IVAFLCTIGAVSLAL-------LHIYKHLVNYTEPTYQRYIVRIVFMVPVYALMSF---- 59
+++FL +I ++++ + +++ LVN+T+ +R + ++ V A+ F
Sbjct: 1 MMSFLVSIASIAMLVKIVLGTFANVFIVLVNFTDCIKKRKFLLADRILTVLAIFRFDLLW 60
Query: 60 LSLVLPASSI-----YFNSIREVYEAWVIYNFLSLCLAWV----------GGPGAVVLSL 104
+ L+ +SS+ YF + W++ N + LA + + L L
Sbjct: 61 IILMNWSSSVFHVGLYFQVRFCICVVWIVTNHFNTWLANILSILYLLKIDNFSNLIFLGL 120
Query: 105 SGRVLKPSWFLMTCCLSPIPLDGRFIRKCKQGGLQFVILKPILVAVTLILYVKGKYKDGN 164
G++ P L+ C FV+L P L+ VT+ + GN
Sbjct: 121 KGKIKCPYIVLLPC---------------------FVLLFPNLIMVTICETTQANGHQGN 159
Query: 165 FSPKQSYLYLTIIYTFSYTMALYALALFYVACKDLL 200
+ K Y T + ++T+ ++ C LL
Sbjct: 160 LTGKTKLTYFTNLIAMTFTLGSLVPFTTFMICFLLL 195
>CYB_GYMTI (P29637) Cytochrome b
Length = 380
Score = 32.7 bits (73), Expect = 1.8
Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 25/126 (19%)
Query: 109 LKPSWFLMTC--CLSPIPLDGRFIRKCKQGGLQFVILKPILVAVTLILYVKGKYKDGNFS 166
+KP W+ + L IP K GG+ + +LV + L K K + F
Sbjct: 269 IKPEWYFLFAYAILRSIPN--------KLGGV-LALAASVLVLFLVPLLHKSKQRSMTFR 319
Query: 167 PKQSYLYLTIIYTFSYTMALYALALFYVACKDLLHPFNPVPKFIIIKSVVFLTYWQGVLV 226
P +L+ T++ L L +V + + HPF III V TY+ +LV
Sbjct: 320 PLLPFLFWTLVANL--------LILTWVGSQPVEHPF------IIIGQVASFTYFTXILV 365
Query: 227 FLAAKS 232
S
Sbjct: 366 LFPIAS 371
>CA1G_HUMAN (Q9UMD9) Collagen alpha 1(XVII) chain (Bullous
pemphigoid antigen 2) (180 kDa bullous pemphigoid
antigen 2)
Length = 1497
Score = 32.0 bits (71), Expect = 3.1
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 349 KVDDIQ-LSRFSSSNSSTPS-NSGPISDVSHSDAMKSSLLVDVSNSVSVPYDLTLIDLDL 406
++DD++ L + S S S +P+ NS + +++ ++ S SVS YD T++D +L
Sbjct: 157 ELDDVKRLLKGSRSASVSPTRNSSNTLPIPKKGTVETKIVTASSQSVSGTYDATILDANL 216
Query: 407 SDH--PEKVPAVDKAGT 421
H +PA GT
Sbjct: 217 PSHVWSSTLPAGSSIGT 233
>YFGC_SALTY (P66950) Hypothetical protein yfgC precursor
Length = 487
Score = 30.4 bits (67), Expect = 8.9
Identities = 23/87 (26%), Positives = 35/87 (39%), Gaps = 10/87 (11%)
Query: 276 GVSRGFTASLGHALMLNDFYHDTVHQFAPTYHDYVLYNHGEGEEGTRKYRSRTFVPLGPE 335
G S G T S+G + + DFY + AP +D +L +Y + + L
Sbjct: 37 GTSAGSTLSIGQEMQMGDFYVRQLRGSAPLINDPLLV----------QYINALGMRLVSH 86
Query: 336 MDAVRRNKHMFENKVDDIQLSRFSSSN 362
D+V+ H F D+I F N
Sbjct: 87 ADSVKTPFHFFLINNDEINAFAFFGGN 113
>YFGC_SALTI (P66951) Hypothetical protein yfgC precursor
Length = 487
Score = 30.4 bits (67), Expect = 8.9
Identities = 23/87 (26%), Positives = 35/87 (39%), Gaps = 10/87 (11%)
Query: 276 GVSRGFTASLGHALMLNDFYHDTVHQFAPTYHDYVLYNHGEGEEGTRKYRSRTFVPLGPE 335
G S G T S+G + + DFY + AP +D +L +Y + + L
Sbjct: 37 GTSAGSTLSIGQEMQMGDFYVRQLRGSAPLINDPLLV----------QYINALGMRLVSH 86
Query: 336 MDAVRRNKHMFENKVDDIQLSRFSSSN 362
D+V+ H F D+I F N
Sbjct: 87 ADSVKTPFHFFLINNDEINAFAFFGGN 113
>YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-)
Length = 1117
Score = 30.4 bits (67), Expect = 8.9
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 313 NHGEGEEGTRKYRSRTFVPLGPEMDAVRRNKHMFENKVDDIQLSRFSSSNSSTPSNSGPI 372
N E+GT+K S +G + A +R K EN D+ L + N +NS +
Sbjct: 45 NASNQEQGTKKLESS----VGEQESATKRAK--IENLKDNQDLIPNNDVNGIHINNSA-V 97
Query: 373 SDVSHSDAMKSSLLVDVSNSVSVPYD-LTLIDLDLSDHPEKVPAVDKAG 420
+D H + D+SN VS+ + T+ + ++D E+ ++ AG
Sbjct: 98 ADTKHKPKIGDIAADDISNEVSIKNEGDTIPEATVADSFEQEASLQVAG 146
>HME2_SCHMA (Q26601) Homeobox protein engrailed-like SMOX-2
Length = 524
Score = 30.4 bits (67), Expect = 8.9
Identities = 14/40 (35%), Positives = 27/40 (67%)
Query: 341 RNKHMFENKVDDIQLSRFSSSNSSTPSNSGPISDVSHSDA 380
RN++ + N+++ + LS SSS+SS+ S+S S ++S +
Sbjct: 179 RNENSYSNEIEQLSLSSSSSSSSSSSSSSSSSSCSTNSSS 218
>CYB_TAPTE (O63699) Cytochrome b
Length = 379
Score = 30.4 bits (67), Expect = 8.9
Identities = 30/134 (22%), Positives = 60/134 (44%), Gaps = 29/134 (21%)
Query: 109 LKPSWFLMTC--CLSPIPLDGRFIRKCKQGGLQFVILKPILVAVTLILYVKGKYKDGNFS 166
+KP W+ + L IP K GG+ +IL +++A+ +L+ S
Sbjct: 268 IKPEWYFLFAYAILRSIPN--------KLGGVLALILSILILAIIPMLHT---------S 310
Query: 167 PKQSYLYLTIIYTFSYTMALYALALFYVACKDLLHPFNPVPKFIIIKSVVFLTYWQGVLV 226
++S ++ + + + L L ++ + + HPF III + + Y+ +LV
Sbjct: 311 KQRSMMFRPLSQCVFWLLVADLLTLTWIGGQPVEHPF------IIIGQLASILYFSLILV 364
Query: 227 FL----AAKSKFIK 236
F+ A ++ F+K
Sbjct: 365 FMPLASAIENNFLK 378
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.325 0.141 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,678,098
Number of Sequences: 164201
Number of extensions: 2183187
Number of successful extensions: 6207
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 6192
Number of HSP's gapped (non-prelim): 12
length of query: 422
length of database: 59,974,054
effective HSP length: 113
effective length of query: 309
effective length of database: 41,419,341
effective search space: 12798576369
effective search space used: 12798576369
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0048.4