
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0040.4
(457 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ARFL_ARATH (Q9XID4) Putative auxin response factor 12 35 0.31
YK82_SCHPO (Q9HGP4) Hypothetical bromodomain protein C631.02 35 0.52
ARFV_ARATH (Q9C8N7) Putative auxin response factor 22 33 1.5
ARFT_ARATH (Q9C7I9) Putative auxin response factor 20 33 2.0
KEL1_YEAST (P38853) Kelch repeats protein 1 32 2.6
BXA2_CLOBO (Q45894) Botulinum neurotoxin type A precursor (EC 3.... 32 3.4
RAV1_ARATH (Q9ZWM9) DNA-binding protein RAV1 32 4.4
KTN1_CHICK (Q90631) Kinectin 32 4.4
ARFN_ARATH (Q9LQE8) Putative auxin response factor 14 32 4.4
ARFU_ARATH (Q9C8N9) Putative auxin response factor 21 31 5.8
TAF1_DROME (P51123) Transcription initiation factor TFIID subuni... 31 7.6
GP10_DICDI (Q06885) Glycoprotein gp100 precursor (P29F8) 31 7.6
BXA1_CLOBO (P10845) Botulinum neurotoxin type A precursor (EC 3.... 31 7.6
WNK3_HUMAN (Q9BYP7) Serine/threonine-protein kinase WNK3 (EC 2.7... 30 9.9
SCC3_YEAST (P40541) Cohesin subunit SCC3 (Irregular cell behavio... 30 9.9
NUCL_HUMAN (P19338) Nucleolin (Protein C23) 30 9.9
MEPE_HUMAN (Q9NQ76) Matrix extracellular phosphoglycoprotein pre... 30 9.9
GCY_YEAST (P14065) GCY protein (EC 1.1.1.-) 30 9.9
FGL1_HUMAN (Q08830) Fibrinogen-like protein 1 precursor (Hepatoc... 30 9.9
B1AR_MELGA (P07700) Beta-1 adrenergic receptor (Beta-1 adrenocep... 30 9.9
>ARFL_ARATH (Q9XID4) Putative auxin response factor 12
Length = 593
Score = 35.4 bits (80), Expect = 0.31
Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 28/193 (14%)
Query: 139 LRTSTSEDVGESPELHNLPKQV---------KIEDDAGRT-TECLEGEDLTSKI--TEAL 186
+ TST E++ E + +LP ++ K+E+++ T E D T + T+
Sbjct: 57 VETSTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQNE 116
Query: 187 NRARTFQSKFPSFMTVMKPAYVNGYSLH-------IPSFFAKKYLKNETDVLLQVLDGRT 239
N+ R + F +T + G+ + +PS + L + ++L L G
Sbjct: 117 NQFRPLVNSFTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQ-ELLAIDLHGNQ 175
Query: 240 WSVSFNLGK------FNAGWKKFTSVNNLKVGDVCLFELNKSVPLSLKVLIFPLAEEPHS 293
W + N GW FT+ L GDV +F ++ L+V I + +
Sbjct: 176 WRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETG--ELRVGIRRARHQQGN 233
Query: 294 LPRSLVQGDRVNH 306
+P S+V D + H
Sbjct: 234 IPSSIVSIDCMRH 246
>YK82_SCHPO (Q9HGP4) Hypothetical bromodomain protein C631.02
Length = 727
Score = 34.7 bits (78), Expect = 0.52
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 14/109 (12%)
Query: 71 EYKDTSHFGVHIFDKSTLEIRYPSHENQDEEHNPDQIDDDSVEILDKIPPCKKTKLKSPM 130
E K++S+F + D TL++ + E + E+ +Q D S + L PP +SP
Sbjct: 45 EEKESSYFPISENDDGTLDL-FGDSELEKEQKGDNQETDYSSQYLHPTPPYTNFDDESPS 103
Query: 131 SCPKP------------RKKLRTSTSEDVGESPELH-NLPKQVKIEDDA 166
S P + L+ E ES + H + PK+V+ EDD+
Sbjct: 104 SPTHPSVSNITVDGDSKKHSLQLQEEEKSSESLDSHTHPPKRVRNEDDS 152
>ARFV_ARATH (Q9C8N7) Putative auxin response factor 22
Length = 598
Score = 33.1 bits (74), Expect = 1.5
Identities = 39/191 (20%), Positives = 74/191 (38%), Gaps = 26/191 (13%)
Query: 139 LRTSTSEDVGESPELHNLPK---------QVKIEDDAGRTTECLEGEDLTSKITEALNRA 189
+ ST E++ E + +LP Q+K+E+++ T + T+++
Sbjct: 57 VEASTREELNELKPICDLPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNE 116
Query: 190 RTFQSKFPSFMTVMKPAYVNGYSLHIPSFFAKKYLKN--------ETDVLLQVLDGRTWS 241
F+ SF V+ + +G +P A + L ++L L G W
Sbjct: 117 NQFRPLVNSFTKVLTASDTSG-GFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWR 175
Query: 242 VSFNLGK------FNAGWKKFTSVNNLKVGDVCLFELNKSVPLSLKVLIFPLAEEPHSLP 295
+ N GW FT+ L GDV +F ++ L+V I + ++P
Sbjct: 176 FNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETG--ELRVGIRRAGHQQGNIP 233
Query: 296 RSLVQGDRVNH 306
S++ + + H
Sbjct: 234 SSIISIESMRH 244
>ARFT_ARATH (Q9C7I9) Putative auxin response factor 20
Length = 606
Score = 32.7 bits (73), Expect = 2.0
Identities = 41/190 (21%), Positives = 78/190 (40%), Gaps = 28/190 (14%)
Query: 142 STSEDVGESPELHNLPKQV---------KIEDDAGRT-TECLEGEDLTSKI--TEALNRA 189
ST E++ E + +LP ++ K+E+++ T E D T + T++ N+
Sbjct: 60 STREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQSENQF 119
Query: 190 RTFQSKFPSFMTVMKPAYVNGYSLH-------IPSFFAKKYLKNETDVLLQVLDGRTWSV 242
R + F +T + G+ + +P + L + ++L + L G W
Sbjct: 120 RPLVNSFTKVLTASDTSAYGGFFVPKKHAIECLPPLDMSQPLPAQ-ELLAKDLHGNQWRF 178
Query: 243 SFNLG------KFNAGWKKFTSVNNLKVGDVCLFELNKSVPLSLKVLIFPLAEEPHSLPR 296
+ GW +FT+ L GDV +F ++ L+V I + ++P
Sbjct: 179 RHSYRGTPQRHSLTTGWNEFTTSKKLVKGDVIVFVRGETG--ELRVGIRRARHQQGNIPS 236
Query: 297 SLVQGDRVNH 306
S+V D + H
Sbjct: 237 SIVSIDCMRH 246
>KEL1_YEAST (P38853) Kelch repeats protein 1
Length = 1164
Score = 32.3 bits (72), Expect = 2.6
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 7/106 (6%)
Query: 273 NKSVPLSLKVLIFPLAEEPHSLPRSLVQGDRVNHINYGRFRYTESQNVLTSKCAET-IKR 331
N +VP+S PLA P P+ DR+N + R TE QN +E+ +
Sbjct: 488 NMNVPISAA----PLASAPSPAPKDFSDADRLNREVHNRNVSTEHQNQSHPVNSESHLIA 543
Query: 332 TSKLISPCPLKNAALEEANKFNSNNPFFIVNI--APDKNRDYRPRV 375
+++P ++ K SN PF I PD + P V
Sbjct: 544 EPNILTPYVPSESSQTPVMKITSNKPFDTPTIQKEPDLSETMDPTV 589
>BXA2_CLOBO (Q45894) Botulinum neurotoxin type A precursor (EC
3.4.24.69) (BoNT/A) (Bontoxilysin A) (BOTOX) [Contains:
Botulinum neurotoxin A, light-chain; Botulinum
neurotoxin A, heavy-chain]
Length = 1295
Score = 32.0 bits (71), Expect = 3.4
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Query: 179 TSKITEALNRARTFQSKFPSFMTVMKPAYVNGYSLHIPSFFAKKYLKNETDVLLQVLDGR 238
+S I L A + S + +F T + + IP +F+K L NE ++ + +
Sbjct: 920 SSTIEVILKNAIVYNSMYENFST--------SFWIKIPKYFSKINLNNEYTIINCIENNS 971
Query: 239 TWSVSFNLGK 248
W VS N G+
Sbjct: 972 GWKVSLNYGE 981
>RAV1_ARATH (Q9ZWM9) DNA-binding protein RAV1
Length = 344
Score = 31.6 bits (70), Expect = 4.4
Identities = 29/104 (27%), Positives = 41/104 (38%), Gaps = 6/104 (5%)
Query: 352 FNSNNPFFIVNIAP-DKNRDYRPRVPKLFIRKHFN--DIQQSEQTVILQCEK---KLCPV 405
F S F + P D + R +PK KHF S + V+L E K+
Sbjct: 181 FRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRF 240
Query: 406 KLTCYPKKGPSRLSKGWVEFAKKSKLEVGDACVFELINKEDPVL 449
+ + + L+KGW F K+ L GD F N +D L
Sbjct: 241 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQL 284
>KTN1_CHICK (Q90631) Kinectin
Length = 1364
Score = 31.6 bits (70), Expect = 4.4
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 137 KKLRTSTSEDVGESPELHNLPKQVKIEDDAGRTTECLEGEDLTSKITEALNRARTFQ 193
+KL+ T+E + EL + K + I+DD RT E E L ++ + +N F+
Sbjct: 646 QKLQALTNEQAAAAHELERMQKSIHIKDDKIRTLE----EQLREELAQTVNTKEEFK 698
>ARFN_ARATH (Q9LQE8) Putative auxin response factor 14
Length = 605
Score = 31.6 bits (70), Expect = 4.4
Identities = 41/193 (21%), Positives = 76/193 (39%), Gaps = 28/193 (14%)
Query: 139 LRTSTSEDVGESPELHNLPK---------QVKIEDDAGRT-TECLEGEDLTSKI--TEAL 186
+ ST E++ E + + P Q+K+E+++ T E D T + T+
Sbjct: 57 VEASTREELNELQPICDFPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNQ 116
Query: 187 NRARTFQSKFPSFMTVMKPAYVNGYSLH-------IPSFFAKKYLKNETDVLLQVLDGRT 239
N+ R + F +T + G+S+ +P + L + ++L L G
Sbjct: 117 NQFRPLVNSFTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQ-EILAIDLHGNQ 175
Query: 240 WSV------SFNLGKFNAGWKKFTSVNNLKVGDVCLFELNKSVPLSLKVLIFPLAEEPHS 293
W + GW FT+ L GDV +F ++ L+V I + +
Sbjct: 176 WRFRHIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETG--ELRVGIRRAGHQQGN 233
Query: 294 LPRSLVQGDRVNH 306
+P S+V + + H
Sbjct: 234 IPSSIVSIESMRH 246
>ARFU_ARATH (Q9C8N9) Putative auxin response factor 21
Length = 606
Score = 31.2 bits (69), Expect = 5.8
Identities = 40/193 (20%), Positives = 78/193 (39%), Gaps = 28/193 (14%)
Query: 139 LRTSTSEDVGESPELHNLPKQV---------KIEDDAGRT-TECLEGEDLTSKI--TEAL 186
++ ST E++ E + +LP ++ K+E+++ E D T + T++
Sbjct: 57 VQASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDEIYAEITLMPDTTQVVIPTQSE 116
Query: 187 NRARTFQSKFPSFMTVMKPAYVNGYSLH-------IPSFFAKKYLKNETDVLLQVLDGRT 239
NR R + F +T + G+S+ +P + L + + + + D +
Sbjct: 117 NRFRPLVNSFTKVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQ- 175
Query: 240 WSVSFNLG------KFNAGWKKFTSVNNLKVGDVCLFELNKSVPLSLKVLIFPLAEEPHS 293
W N GW +F + L GDV +F ++ L+V I + +
Sbjct: 176 WRFRHNYRGTPQRHSLTTGWNEFITSKKLVKGDVIVFVRGETG--ELRVGIRRARHQQGN 233
Query: 294 LPRSLVQGDRVNH 306
+P S+V D + H
Sbjct: 234 IPSSIVSIDCMRH 246
>TAF1_DROME (P51123) Transcription initiation factor TFIID subunit 1
(EC 2.7.1.37) (Transcription initiation factor TFIID 230
kDa subunit) (TAFII-230) (TAFII250) (TBP-associated
factor 230 kDa) (p230)
Length = 2065
Score = 30.8 bits (68), Expect = 7.6
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 12/107 (11%)
Query: 99 DEEHNPDQIDDDSVEILDKIPPCK---KTKLKSPMSCPKPRKKLRTSTSEDVGESPELHN 155
D P QI D +E+ D KTK S S P+ + + R + ED E P + +
Sbjct: 349 DWRFGPAQIWYDMLEVPDSGEGFNYGFKTKAASTSSQPQLKDERRVKSPEDDVEDPSIAD 408
Query: 156 ----LPKQVKIEDDAGRTTECLEGEDLTSKITEALNRARTFQSKFPS 198
+ Q+ EDD +G D+ +K+ + LN PS
Sbjct: 409 DAFLMVSQLHWEDDV-----VWDGNDIKAKVLQKLNSKTNAAGWLPS 450
>GP10_DICDI (Q06885) Glycoprotein gp100 precursor (P29F8)
Length = 544
Score = 30.8 bits (68), Expect = 7.6
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 103 NPDQIDDDSVEILDKIPPCKKTKLKSPMSCPKPRKKLRTSTSEDV 147
NPDQ++DD E+ D K+T +P KP ++ S+ +
Sbjct: 96 NPDQLNDDRFEVSDSSDFSKQTPTPTPTPTSKPTSTPTSTPSQTI 140
>BXA1_CLOBO (P10845) Botulinum neurotoxin type A precursor (EC
3.4.24.69) (BoNT/A) (Bontoxilysin A) (BOTOX) [Contains:
Botulinum neurotoxin A, light-chain; Botulinum
neurotoxin A, heavy-chain]
Length = 1295
Score = 30.8 bits (68), Expect = 7.6
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 179 TSKITEALNRARTFQSKFPSFMTVMKPAYVNGYSLHIPSFFAKKYLKNETDVLLQVLDGR 238
+SKI L A + S + +F T + + IP +F L NE ++ + +
Sbjct: 920 SSKIEVILKNAIVYNSMYENFST--------SFWIRIPKYFNSISLNNEYTIINCMENNS 971
Query: 239 TWSVSFNLGK 248
W VS N G+
Sbjct: 972 GWKVSLNYGE 981
>WNK3_HUMAN (Q9BYP7) Serine/threonine-protein kinase WNK3 (EC
2.7.1.37) (Protein kinase with no lysine 3) (Protein
kinase, lysine-deficient 3)
Length = 1743
Score = 30.4 bits (67), Expect = 9.9
Identities = 14/44 (31%), Positives = 23/44 (51%)
Query: 114 ILDKIPPCKKTKLKSPMSCPKPRKKLRTSTSEDVGESPELHNLP 157
I D++ P KKT+ K P C + R+ + + +V P+ LP
Sbjct: 484 IRDRVTPIKKTREKKPAGCLEERRDSQCKSMGNVFPQPQNTTLP 527
>SCC3_YEAST (P40541) Cohesin subunit SCC3 (Irregular cell behavior
protein 1)
Length = 1150
Score = 30.4 bits (67), Expect = 9.9
Identities = 23/86 (26%), Positives = 37/86 (42%), Gaps = 11/86 (12%)
Query: 84 DKSTLEIRYPSHENQD---------EEHNPDQIDDDSVEILDKIPPCKKTKLKSPMSCPK 134
DK T + ++ E QD E+ DQ DDD V+ +K K KS +
Sbjct: 35 DKITAKTQHEEEEEQDTGESEESSSEDDYEDQDDDDYVDTATAKRKSRKRKPKSASNTSS 94
Query: 135 PRKKLRTSTSED--VGESPELHNLPK 158
R+K + ++++ V +P H K
Sbjct: 95 KRQKKKPTSAQKSAVSHAPAYHRSKK 120
>NUCL_HUMAN (P19338) Nucleolin (Protein C23)
Length = 706
Score = 30.4 bits (67), Expect = 9.9
Identities = 27/105 (25%), Positives = 40/105 (37%), Gaps = 2/105 (1%)
Query: 93 PSHENQDEEHNPDQIDDDSVEILDKIPPCKKTKLKSPMSCPK--PRKKLRTSTSEDVGES 150
P+ E++D+E + D DDD E D +T K P K + ED E
Sbjct: 181 PASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEED 240
Query: 151 PELHNLPKQVKIEDDAGRTTECLEGEDLTSKITEALNRARTFQSK 195
E + EDD E E E+ + EA + + +K
Sbjct: 241 DEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAK 285
>MEPE_HUMAN (Q9NQ76) Matrix extracellular phosphoglycoprotein
precursor (Osteoblast/osteocyte factor 45) (OF45)
Length = 525
Score = 30.4 bits (67), Expect = 9.9
Identities = 29/97 (29%), Positives = 38/97 (38%), Gaps = 20/97 (20%)
Query: 133 PKPRKKLRTSTSEDVGESPELHNLPKQVKIEDDAGRTTECLEGEDLTSKITEALNRARTF 192
P P K+ R S D ES + +PK K G T +G D +++ LN + F
Sbjct: 376 PAPSKEKRKEGSSDAAESTNYNEIPKNGK-----GSTR---KGVDHSNRNQATLNEKQRF 427
Query: 193 QSKFPSFMTVMKPAYVNGYSLHIPSFFAKKYLKNETD 229
SK S L IPS +KNE D
Sbjct: 428 PSKGKS------------QGLPIPSRGLDNEIKNEMD 452
>GCY_YEAST (P14065) GCY protein (EC 1.1.1.-)
Length = 312
Score = 30.4 bits (67), Expect = 9.9
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 20/98 (20%)
Query: 207 YVNGYSLHIPSFFAKKYLKNETDVLL--QVLDG------------RTWSVSFNL---GKF 249
YV+ Y +H P+ Y+KNE D+L DG +TW + L GK
Sbjct: 105 YVDLYLMHWPARLDPAYIKNE-DILSVPTKKDGSRAVDITNWNFIKTWELMQELPKTGKT 163
Query: 250 NAGWKKFTSVNNLKVGDVCLFELNKSVPLSLKVLIFPL 287
A S+NNLK D+ + NK P + +V I PL
Sbjct: 164 KAVGVSNFSINNLK--DLLASQGNKLTPAANQVEIHPL 199
>FGL1_HUMAN (Q08830) Fibrinogen-like protein 1 precursor
(Hepatocyte-derived fibrinogen-related protein 1)
(HFREP-1) (Hepassocin) (HP-041)
Length = 312
Score = 30.4 bits (67), Expect = 9.9
Identities = 19/83 (22%), Positives = 35/83 (41%), Gaps = 12/83 (14%)
Query: 32 DGTDWKIYHSKTDGDVWFQNGWKDFAKYYS---LDHG---------HMVLFEYKDTSHFG 79
DG W + ++DG F GWKD+ + HG H + + T
Sbjct: 116 DGGGWTVIQRRSDGSENFNRGWKDYENGFGNFVQKHGEYWLGNKNLHFLTTQEDYTLKID 175
Query: 80 VHIFDKSTLEIRYPSHENQDEEH 102
+ F+K++ +Y + + DE++
Sbjct: 176 LADFEKNSRYAQYKNFKVGDEKN 198
>B1AR_MELGA (P07700) Beta-1 adrenergic receptor (Beta-1
adrenoceptor) (Beta-1 adrenoreceptor) (Beta-T)
Length = 483
Score = 30.4 bits (67), Expect = 9.9
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 357 PFFIVNIAPDKNRDYRPRVPKLFIRKHFNDIQQSEQTVILQCEK---KLCPVKLTCYPKK 413
PFF+VNI NRD P LF+ ++ S I+ C + +L C+P+K
Sbjct: 305 PFFLVNIVNVFNRDLVP--DWLFVFFNWLGYANSAFNPIIYCRSPDFRKAFKRLLCFPRK 362
Query: 414 GPSRLSKG 421
RL G
Sbjct: 363 ADRRLHAG 370
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,652,537
Number of Sequences: 164201
Number of extensions: 2560443
Number of successful extensions: 6307
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 6293
Number of HSP's gapped (non-prelim): 31
length of query: 457
length of database: 59,974,054
effective HSP length: 114
effective length of query: 343
effective length of database: 41,255,140
effective search space: 14150513020
effective search space used: 14150513020
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0040.4