Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0036b.1
         (122 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

G47B_DROME (P58961) Putative gustatory receptor 47b                    30  0.73
YCFI_YEAST (P39109) Metal resistance protein YCF1 (Yeast cadmium...    30  0.96
SYA_BACSU (O34526) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...    30  1.3
SULX_YEAST (P53394) Putative sulfate transporter YPR003C               28  2.8
STV1_YEAST (P37296) Vacuolar ATP synthase 101 kDa subunit (V-ATP...    28  2.8
PPK_NEIMB (Q9JXS9) Polyphosphate kinase (EC 2.7.4.1) (Polyphosph...    27  8.1
PPK_NEIMA (Q9JW42) Polyphosphate kinase (EC 2.7.4.1) (Polyphosph...    27  8.1
NOF_DROME (P16320) 120.7 kDa protein in NOF-FB transposable element    27  8.1

>G47B_DROME (P58961) Putative gustatory receptor 47b
          Length = 414

 Score = 30.4 bits (67), Expect = 0.73
 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 7/92 (7%)

Query: 8   YEPNDSLRSDRFIVSLKDHSSTCNF--SELLEILSRHVVAGIFYKGLNI-----VLCILI 60
           Y+ +DS      I  L + S  C+F  +EL  +      AGIFY    +     V+C  +
Sbjct: 218 YQADDSSEVHERIAYLFEMSKRCSFLLAELNGVFGFAAAAGIFYDFTIMTCFVYVICQKL 277

Query: 61  LQKDKLIRTHTCTLLHQLMGKSKVFDANCYSY 92
           L+++     +   LLH  +   KV   + Y Y
Sbjct: 278 LEREPWDPEYVYMLLHVAIHTYKVVITSTYGY 309


>YCFI_YEAST (P39109) Metal resistance protein YCF1 (Yeast cadmium
           factor 1)
          Length = 1515

 Score = 30.0 bits (66), Expect = 0.96
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 8/70 (11%)

Query: 5   LDWYEPNDSLRSDRFIVSLKDHSSTCNFSELLEILSRHVVAGIFYKG--------LNIVL 56
           L W E + S+ ++  ++      +  NF++L+ IL RH   GI+Y G          ++ 
Sbjct: 120 LHWIEYDRSVVANTVLLFYWLFETFGNFAKLINILIRHTYEGIWYSGQTGFILTLFQVIT 179

Query: 57  CILILQKDKL 66
           C  IL  + L
Sbjct: 180 CASILLLEAL 189


>SYA_BACSU (O34526) Alanyl-tRNA synthetase (EC 6.1.1.7)
           (Alanine--tRNA ligase) (AlaRS)
          Length = 878

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 21/67 (31%), Positives = 35/67 (51%), Gaps = 4/67 (5%)

Query: 14  LRSDRFIVSLKDHSSTCNFSELLEILSRHVVAGIFYKGLNIVLCILILQKDKLIRTHTCT 73
           LRS++ +V +KD     N   + E +   V +G   KGL++   +    +  +I+ HT T
Sbjct: 513 LRSEQAVVRIKDVQKAPNGQHVHEGV---VESGTVQKGLHVTAEVEDHMRSGVIKNHTAT 569

Query: 74  -LLHQLM 79
            LLHQ +
Sbjct: 570 HLLHQAL 576


>SULX_YEAST (P53394) Putative sulfate transporter YPR003C
          Length = 754

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 21/62 (33%), Positives = 32/62 (50%), Gaps = 6/62 (9%)

Query: 14  LRSDRFIVSLKDHSSTCNFSELLEIL-----SRHVVAGIFYKGLNIVLCILILQKDKLIR 68
           L+ D+F+VSL  H  T  F ++L ++       H+   IF     IVL +  L K KL++
Sbjct: 255 LKLDKFLVSLPQHYHT-PFEKILFLIDYAPAQYHIPTAIFSGCCLIVLFLTRLLKRKLMK 313

Query: 69  TH 70
            H
Sbjct: 314 YH 315


>STV1_YEAST (P37296) Vacuolar ATP synthase 101 kDa subunit (V-ATPase
           subunit AC115)
          Length = 890

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 44  VAGIFYKGLNIVLCILILQKDKLIRTHTCTLLHQLMGKSKVFDANCYSYPPPLFRSL 100
           V  +F     + +CIL+  +      H   L H +   SK F+   Y+Y P  FR++
Sbjct: 833 VVFLFAMWFVLTVCILVFMEGTSAMLHALRL-HWVEAMSKFFEGEGYAYEPFSFRAI 888


>PPK_NEIMB (Q9JXS9) Polyphosphate kinase (EC 2.7.4.1)
           (Polyphosphoric acid kinase) (ATP-polyphosphate
           phosphotransferase)
          Length = 685

 Score = 26.9 bits (58), Expect = 8.1
 Identities = 11/46 (23%), Positives = 28/46 (59%)

Query: 25  DHSSTCNFSELLEILSRHVVAGIFYKGLNIVLCILILQKDKLIRTH 70
           D ++  N+++ LE    HVV G+F   ++  + ++I ++D +++ +
Sbjct: 407 DEANNVNWAKQLEEAGAHVVYGVFGYKVHAKMALVIRREDGVLKRY 452


>PPK_NEIMA (Q9JW42) Polyphosphate kinase (EC 2.7.4.1)
           (Polyphosphoric acid kinase) (ATP-polyphosphate
           phosphotransferase)
          Length = 685

 Score = 26.9 bits (58), Expect = 8.1
 Identities = 11/46 (23%), Positives = 28/46 (59%)

Query: 25  DHSSTCNFSELLEILSRHVVAGIFYKGLNIVLCILILQKDKLIRTH 70
           D ++  N+++ LE    HVV G+F   ++  + ++I ++D +++ +
Sbjct: 407 DEANNVNWAKQLEEAGAHVVYGVFGYKVHAKMALVIRREDGVLKRY 452


>NOF_DROME (P16320) 120.7 kDa protein in NOF-FB transposable element
          Length = 1056

 Score = 26.9 bits (58), Expect = 8.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 23  LKDHSSTCNFSELLEILSRHVVAGIFYKGL 52
           L    +TC F  L+EILS   +   +YK L
Sbjct: 790 LLQFKNTCPFDSLVEILSTAYIDNFYYKSL 819


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.324    0.140    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,964,629
Number of Sequences: 164201
Number of extensions: 481209
Number of successful extensions: 1185
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1181
Number of HSP's gapped (non-prelim): 8
length of query: 122
length of database: 59,974,054
effective HSP length: 98
effective length of query: 24
effective length of database: 43,882,356
effective search space: 1053176544
effective search space used: 1053176544
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 58 (26.9 bits)


Lotus: description of TM0036b.1