BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0035.12
         (125 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

PINH_ARATH (Q9XGW1) PINHEAD protein (ZWILLE protein)                   29  1.6
GLI4_HUMAN (P10075) Zinc finger protein GLI4 (Krueppel-related z...    29  2.1
HIR1_YEAST (P32479) Histone transcription regulator 1                  28  2.8
CATA_YERPE (Q9X6B0) Peroxidase/catalase (EC 1.11.1.6) (Catalase-...    28  2.8
H11_DROVI (Q24704) Histone H1.1                                        28  3.6
Z264_HUMAN (O43296) Zinc finger protein 264                            28  4.7
IMMT_DROME (P91928) Putative mitochondrial inner membrane protein      28  4.7
Z286_HUMAN (Q9HBT8) Zinc finger protein 286                            27  6.2
TPIS_MYCFL (P48779) Triosephosphate isomerase (EC 5.3.1.1) (TIM)...    27  6.2
PREB_HUMAN (Q9HCU5) Prolactin regulatory element-binding protein...    27  6.2
DX6A_BRARE (Q98877) Homeobox protein Dlx6a (DLX-6)                     27  6.2
ARS2_HUMAN (Q9BXP5) Arsenite-resistance protein 2                      27  6.2
YQW3_CAEEL (Q09556) Hypothetical protein F33H1.3 from chromosome II    27  8.0
PCP_STRCO (Q9RL48) Pyrrolidone-carboxylate peptidase (EC 3.4.19....    27  8.0
BCR_HUMAN (P11274) Breakpoint cluster region protein (EC 2.7.1.-)      27  8.0

>PINH_ARATH (Q9XGW1) PINHEAD protein (ZWILLE protein)
          Length = 988

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 17/44 (38%), Positives = 24/44 (53%), Gaps = 1/44 (2%)

Query: 31  VLAFMPSLFKSNDLARRKRASDGDKSLNKTQEEKASIWNKTQIK 74
           ++A +  L+K +DL RR  A DG KSL  T  E    W +  +K
Sbjct: 177 IIAELVRLYKESDLGRRLPAYDGRKSL-YTAGELPFTWKEFSVK 219


>GLI4_HUMAN (P10075) Zinc finger protein GLI4 (Krueppel-related zinc
           finger protein 4) (HKR4 protein)
          Length = 376

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 17/64 (26%), Positives = 30/64 (46%)

Query: 11  SHRRSFFTHINWAPDQHPHEVLAFMPSLFKSNDLARRKRASDGDKSLNKTQEEKASIWNK 70
           SH   F  H+     + P++      +  +S++L R +R   G+K    +Q  KA IW+ 
Sbjct: 249 SHSSHFTQHLRIHNGEKPYKCGECGQAFSQSSNLVRHQRLHTGEKPYACSQCGKAFIWSS 308

Query: 71  TQIK 74
             I+
Sbjct: 309 VLIE 312


>HIR1_YEAST (P32479) Histone transcription regulator 1
          Length = 788

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 15/59 (25%), Positives = 31/59 (52%)

Query: 12  HRRSFFTHINWAPDQHPHEVLAFMPSLFKSNDLARRKRASDGDKSLNKTQEEKASIWNK 70
           +R ++ T+++      P EV  F P LF+ N   ++K+  D + +L    ++K   ++K
Sbjct: 212 NRGTWDTNVSLIGHDAPTEVARFNPRLFERNAGVKQKKDDDPENALVGQNDDKVHHFDK 270


>CATA_YERPE (Q9X6B0) Peroxidase/catalase (EC 1.11.1.6)
           (Catalase-peroxidase) (Antigen 5)
          Length = 737

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 30/109 (27%), Positives = 44/109 (39%), Gaps = 16/109 (14%)

Query: 2   IHNPGQHHHSHRRSFF--THINWAP------DQHPHEVLAFMPSLFKSNDLARRKRASDG 53
           + NP +   +  R++F  TH +  P      D+ P E   +   L  +N     K     
Sbjct: 392 LENPEEFKMAFARAWFKLTHRDMGPAARYLGDEVPKETFIWQDPLPAAN----YKMIDSA 447

Query: 54  DKSLNKTQEEKASIWNKTQIKTPLNKASTFEATKLRSGTCIFRSGAAVR 102
           D S  K +  K  + +   IKT    ASTF  T  R G     +GA +R
Sbjct: 448 DISELKDKILKTGLSDTKLIKTAWASASTFRGTDFRGGD----NGARIR 492


>H11_DROVI (Q24704) Histone H1.1
          Length = 250

 Score = 28.1 bits (61), Expect = 3.6
 Identities = 23/70 (32%), Positives = 36/70 (50%), Gaps = 5/70 (7%)

Query: 56  SLNKTQEEKASIWNKTQIKTPLNKASTFEATKLRSGTCIFR--SGAAVRFVILGFAERRE 113
           S NK  + KAS   K   KT    AS   ATK +S T   +  +GAA + +    A ++ 
Sbjct: 119 SANKDAKPKASAVEK---KTKKVNASAARATKSKSSTSTTKKAAGAADKKLSKSAAAKKN 175

Query: 114 MEEEEKRKQK 123
           +E+++  K+K
Sbjct: 176 VEKKKADKEK 185


>Z264_HUMAN (O43296) Zinc finger protein 264
          Length = 627

 Score = 27.7 bits (60), Expect = 4.7
 Identities = 14/64 (21%), Positives = 28/64 (42%)

Query: 11  SHRRSFFTHINWAPDQHPHEVLAFMPSLFKSNDLARRKRASDGDKSLNKTQEEKASIWNK 70
           S+R+    H +    + P+E +    +  + + L R KR   G+K     +  K+  W+ 
Sbjct: 465 SNRKDLIRHFSIHTGEKPYECVECGKAFTRMSGLTRHKRIHSGEKPYECVECGKSFCWST 524

Query: 71  TQIK 74
             I+
Sbjct: 525 NLIR 528


>IMMT_DROME (P91928) Putative mitochondrial inner membrane protein
          Length = 841

 Score = 27.7 bits (60), Expect = 4.7
 Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 13/98 (13%)

Query: 35  MPSLFKS------NDLARRKRASDGDKSLNKTQEEKASIW------NKTQIKTPLNKAST 82
           +P+LF S      +D  R  RAS+  ++ + TQ+  A  W       K Q    ++  + 
Sbjct: 2   LPTLFPSKHKPKLSDQIRVARASETKRTTSSTQDSCACAWECGEWKRKQQHWPAIHPPAL 61

Query: 83  FEATKLRSGTCIFRSGAA-VRFVILGFAERREMEEEEK 119
            ++++LR+   IF S    ++F +   A  R  ++  K
Sbjct: 62  TQSSQLRTNWAIFNSRRRDLKFTVAEGAGARAEQDHSK 99


>Z286_HUMAN (Q9HBT8) Zinc finger protein 286
          Length = 521

 Score = 27.3 bits (59), Expect = 6.2
 Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 2   IHNPGQHHHSHRRSFFTHINWAPDQHPHEVLAFMPSLFKSNDLARRKRASDGD---KSLN 58
           + N   +   H R  FTH+N   ++  H+   +  S  + + L    R   G     +L 
Sbjct: 162 LENQQGNQERHLREMFTHMNSLSEETDHKHDVYWKSFNQKSVLITEDRVPKGSYAFHTLE 221

Query: 59  KTQEEKASIWNK 70
           K+ ++K+++  K
Sbjct: 222 KSLKQKSNLMKK 233


>TPIS_MYCFL (P48779) Triosephosphate isomerase (EC 5.3.1.1) (TIM)
           (Triose-phosphate isomerase)
          Length = 242

 Score = 27.3 bits (59), Expect = 6.2
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 3/100 (3%)

Query: 21  NWAPDQHPHEVLAFMPS--LFKSNDLARRKRASDGDKSLNKTQEEKASIWNKTQIKTPLN 78
           NW  ++  HE   F+    +F S +L + K   D   + + T     S     ++K    
Sbjct: 8   NWKMNKTVHETRDFIQKFDIFYSKNLGKIKDNLDFAIAPSFTSLALISTSKIDKLKVAAQ 67

Query: 79  KASTFEATKLRSG-TCIFRSGAAVRFVILGFAERREMEEE 117
             S F++       +       AV +VI+G +ERRE+ +E
Sbjct: 68  NLSQFDSGAFTGEISAKMLQDLAVHYVIIGHSERREIFKE 107


>PREB_HUMAN (Q9HCU5) Prolactin regulatory element-binding protein
           (Mammalian guanine nucleotide exchange factor mSec12)
          Length = 417

 Score = 27.3 bits (59), Expect = 6.2
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 7/69 (10%)

Query: 30  EVLAFMPSLFKSNDLARRKRASDGDKSLNKTQEEKASIWNKTQIKTPLN---KASTFEAT 86
           +VL F     +  DLA      DG K +   ++ KAS+W K Q+ T L+      TF +T
Sbjct: 188 KVLEFKAHEGEIEDLAL---GPDG-KLVTVGRDLKASVWQKDQLVTQLHWQENGPTFSST 243

Query: 87  KLRSGTCIF 95
             R   C F
Sbjct: 244 PYRYQACRF 252


>DX6A_BRARE (Q98877) Homeobox protein Dlx6a (DLX-6)
          Length = 247

 Score = 27.3 bits (59), Expect = 6.2
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 16/80 (20%)

Query: 2   IHNPGQHHHSHRRSFFTHIN-------WAPDQHPHEVLAFMPSLFKSNDLARRKRASDGD 54
           +H+   HHH H  S ++  N       ++   HPH    ++PS + SN       AS   
Sbjct: 47  LHSGSHHHHQHDSSPYSGSNSYNRSLPYSYVSHPHH-SPYLPS-YHSN-------ASGTQ 97

Query: 55  KSLNKTQEEKASIWNKTQIK 74
             L+ T+++K ++    +I+
Sbjct: 98  TRLDATEQQKTTVIENGEIR 117


>ARS2_HUMAN (Q9BXP5) Arsenite-resistance protein 2
          Length = 876

 Score = 27.3 bits (59), Expect = 6.2
 Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 7/83 (8%)

Query: 41  SNDLARRKRASDGDKSLNKTQEEKASIWNKTQIKTPLNKASTFEATKLRSGTCIFRSGAA 100
           SND   +K   DGDK   K   EK +  +  +     +   +F+   +        SG A
Sbjct: 320 SNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQA 379

Query: 101 VRFVILGFAERREMEEEEKRKQK 123
                    E+ E EE  K K+K
Sbjct: 380 EE-------EKEEAEEALKEKEK 395


>YQW3_CAEEL (Q09556) Hypothetical protein F33H1.3 from chromosome II
          Length = 359

 Score = 26.9 bits (58), Expect = 8.0
 Identities = 17/57 (29%), Positives = 26/57 (44%), Gaps = 2/57 (3%)

Query: 8   HHHSHRRSFFTHINWAPDQHPHE--VLAFMPSLFKSNDLARRKRASDGDKSLNKTQE 62
           HHH H     +H N    Q+ HE  V++  P + +SN+ A     S   +  N  +E
Sbjct: 248 HHHHHHPHASSHYNPMGFQNHHEEAVISSAPQINRSNEPAAPATLSAAPELRNLRRE 304


>PCP_STRCO (Q9RL48) Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)
           (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I)
           (PGP-I) (Pyrase)
          Length = 216

 Score = 26.9 bits (58), Expect = 8.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 12  HRRSFFTHINWAPDQHPHEVLAFMP 36
           H R  F H+ WAP+Q P      +P
Sbjct: 160 HLRGGFAHVPWAPEQVPDGTAPALP 184


>BCR_HUMAN (P11274) Breakpoint cluster region protein (EC 2.7.1.-)
          Length = 1271

 Score = 26.9 bits (58), Expect = 8.0
 Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 11/83 (13%)

Query: 42  NDLARRKRASDGDKSLNKTQEEKASIWNKTQIKTPLNKASTFEATKLRSGTCIFRSGAAV 101
           +D+ R KRA+ G K+   T+  K  +  +  +   ++ +  F            R+G + 
Sbjct: 796 SDIQREKRANKGSKA---TERLKKKLSEQESLLLLMSPSMAFRVHS--------RNGKSY 844

Query: 102 RFVILGFAERREMEEEEKRKQKQ 124
            F+I    ER E  E  + +QK+
Sbjct: 845 TFLISSDYERAEWRENIREQQKK 867


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.317    0.129    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,407,622
Number of Sequences: 164201
Number of extensions: 493154
Number of successful extensions: 1854
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1846
Number of HSP's gapped (non-prelim): 17
length of query: 125
length of database: 59,974,054
effective HSP length: 101
effective length of query: 24
effective length of database: 43,389,753
effective search space: 1041354072
effective search space used: 1041354072
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)