BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0034b.4
         (217 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

P65_MYCPN (P53663) Proline-rich P65 protein                            54  3e-07
SSP2_PLAYO (Q01443) Sporozoite surface protein 2 precursor             50  3e-06
P65H_MYCGE (P47459) Proline-rich P65 protein homolog                   49  9e-06
DRPL_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrop...    47  3e-05
RPB1_MOUSE (P08775) DNA-directed RNA polymerase II largest subun...    45  1e-04
RPB1_HUMAN (P24928) DNA-directed RNA polymerase II largest subun...    45  1e-04
RPB1_CRIGR (P11414) DNA-directed RNA polymerase II largest subun...    45  1e-04
YDF3_SCHPO (Q10475) Probable eukaryotic initiation factor C17C9.03     44  4e-04
GLS2_YEAST (P40989) 1,3-beta-glucan synthase component GLS2 (EC ...    41  0.002
CBPA_DICDI (P35085) Calcium-binding protein                            41  0.002
GLT4_WHEAT (P08489) Glutenin, high molecular weight subunit PW21...    40  0.003
RPB1_DICDI (P35084) DNA-directed RNA polymerase II largest subun...    40  0.004
P32_MYCGA (Q49378) P32 adhesin (Cytadhesin P32)                        40  0.004
YEA7_YEAST (P40002) Hypothetical 72.5 kDa protein in GCN4-WBP1 i...    40  0.005
GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 ...    40  0.005
DR48_YEAST (P18899) DDR48 stress protein (DNA damage-responsive ...    40  0.005
YI71_DROME (P04282) Hypothetical 51 kDa protein in copia-like tr...    39  0.007
RPB1_DROME (P04052) DNA-directed RNA polymerase II largest subun...    39  0.007
P32_MYCGE (Q49417) P32 adhesin (Cytadhesin P32)                        39  0.009
CAP1_DICDI (P19198) cAMP binding protein CABP1A/CABP1B (CABP1 pr...    39  0.012

>P65_MYCPN (P53663) Proline-rich P65 protein
          Length = 423

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 36/117 (30%), Positives = 57/117 (47%), Gaps = 6/117 (5%)

Query: 2   DPNNHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRSQ-NPTNYQVPHQFSNQRPQNPNYF 60
           DPN  +Y   N+   P +  +PN Y DPN +  P +  +P NY  P+ +         Y 
Sbjct: 75  DPNQAYYADPNAYQDPNAYTDPNAYVDPNAYQDPNAYVDPNNYTDPNAYYGYGQDGQAYP 134

Query: 61  QVPHQFSNQ-HPQNPNYYPDPNQYSNQSSFV-PNFHP---SYGSVRYPSQTPQSSGY 112
           Q   Q  NQ +  +PN Y DPN Y++ +++V PN +    +Y    Y + T  ++ Y
Sbjct: 135 QDYAQDPNQAYYADPNAYQDPNAYTDPNAYVDPNAYQDPNAYTDPYYVTSTDPNAYY 191



 Score = 35.0 bits (79), Expect = 0.13
 Identities = 21/61 (34%), Positives = 30/61 (48%), Gaps = 6/61 (9%)

Query: 2   DPNNHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQ 61
           DPN  +Y   N+   P +  +PN Y DPN +     Q+P  Y  P+  ++  P N  Y Q
Sbjct: 140 DPNQAYYADPNAYQDPNAYTDPNAYVDPNAY-----QDPNAYTDPYYVTSTDP-NAYYGQ 193

Query: 62  V 62
           V
Sbjct: 194 V 194


>SSP2_PLAYO (Q01443) Sporozoite surface protein 2 precursor
          Length = 827

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 7/93 (7%)

Query: 2   DPNN-HHYNTQNSSSYPISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQ-RPQNPNY 59
           +PNN ++ N  N+ + P +  NPNN  +PN  S P + NP       +  N+ +P  PN 
Sbjct: 353 NPNNPNNPNNPNNPNNPNNPNNPNNPNNPNDPSNPNNPNPKKRNPKRRNPNKPKPNKPN- 411

Query: 60  FQVPHQFSNQHPQNPNYYPDPNQYSNQSSFVPN 92
              P++ +   P NPN  P+PN+ SN +   PN
Sbjct: 412 ---PNKPNPNEPSNPN-KPNPNEPSNPNKPNPN 440



 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 46/162 (28%), Positives = 70/162 (42%), Gaps = 11/162 (6%)

Query: 4   NNHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRS-QNPTNYQVPHQFSNQRPQNPNYFQV 62
           N +  N  N+ + P +  NPNN  +PN  + P +  NP N   P+  +N  P NPN    
Sbjct: 305 NPNDPNDPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNPNN--PNNPNNPNN 362

Query: 63  PHQFSN-QHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQ----TPQSSGYMPMVR 117
           P+  +N  +P NPN   +PN  SN ++  PN        R P++     P  +   P   
Sbjct: 363 PNNPNNPNNPNNPNNPNNPNDPSNPNN--PNPKKRNPKRRNPNKPKPNKPNPNKPNPNEP 420

Query: 118 ANFPSVDGPEFPEFSTQVNLGDGSADNEVNEVTPKSKKTHAP 159
           +N P+   P  P    + N  + S  N+ N   P +     P
Sbjct: 421 SN-PNKPNPNEPSNPNKPNPNEPSNPNKPNPNEPSNPNKPNP 461



 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 48/162 (29%), Positives = 72/162 (43%), Gaps = 27/162 (16%)

Query: 2   DPNN-HHYNTQNSSSYPISNQNPNNYEDPNQFSYPRS-QNPTNYQVPHQFSNQRPQNPNY 59
           +PNN ++ N  N+ + P +  NPNN  +PN  + P +  NP N   P+  +N  P NPN 
Sbjct: 323 NPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNPNN--PNNPNN 380

Query: 60  FQVPHQFSNQHP-------QNPN---------YYPDPNQYSNQSSFVPNFHPSYGSVRYP 103
              P   +N +P       +NPN           P+PN+ SN +   PN  PS  +   P
Sbjct: 381 PNDPSNPNNPNPKKRNPKRRNPNKPKPNKPNPNKPNPNEPSNPNKPNPN-EPSNPNKPNP 439

Query: 104 SQTPQSSGYMPMVRANFPSVDGPEFPEFSTQVNLGDGSADNE 145
           ++    +   P    N PS   P  P  +  +N  + S  NE
Sbjct: 440 NEPSNPNKPNP----NEPS--NPNKPNPNEPLNPNEPSNPNE 475



 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 46/163 (28%), Positives = 66/163 (40%), Gaps = 8/163 (4%)

Query: 3   PNNHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRS-QNPTNYQVPHQFSN-QRPQNPNYF 60
           PN +     N  S P    NPN   +PN+ S P    NP     P++ SN   P NP   
Sbjct: 459 PNPNEPLNPNEPSNPNEPSNPNAPSNPNEPSNPNEPSNPNEPSNPNEPSNPNEPSNPKKP 518

Query: 61  QVPHQFSN-QHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSSG---YMPMV 116
             P++ SN   P NPN   +PN+ SN +   P+      + + PS   + S      P  
Sbjct: 519 SNPNEPSNPNEPLNPNEPSNPNEPSNPNE--PSNPEEPSNPKEPSNPNEPSNPEEPNPEE 576

Query: 117 RANFPSVDGPEFPEFSTQVNLGDGSADNEVNEVTPKSKKTHAP 159
            +N      PE P    ++N  + S   E N   P + +   P
Sbjct: 577 PSNPKEPSNPEEPINPEELNPKEPSNPEESNPKEPINPEESNP 619



 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 50/157 (31%), Positives = 63/157 (39%), Gaps = 16/157 (10%)

Query: 2   DPNNHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRS-QNPTNYQVPHQFSN-QRPQNPNY 59
           +P+N +    N    P    NPN   +PN  S P    NP     P++ SN   P NPN 
Sbjct: 452 EPSNPNKPNPNEPLNPNEPSNPNEPSNPNAPSNPNEPSNPNEPSNPNEPSNPNEPSNPNE 511

Query: 60  FQVPHQFSN-QHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSSGYMPMVRA 118
              P + SN   P NPN   +PN+ SN     PN  PS  +   PS   + S        
Sbjct: 512 PSNPKKPSNPNEPSNPNEPLNPNEPSN-----PN-EPS--NPNEPSNPEEPSNPKEPSNP 563

Query: 119 NFPSVDGPEFPEFSTQVNLGDGSADNE---VNEVTPK 152
           N PS   PE P      N  + S   E     E+ PK
Sbjct: 564 NEPS--NPEEPNPEEPSNPKEPSNPEEPINPEELNPK 598



 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)

Query: 2   DPNNHHYNTQNSSSYPISNQNPN----NYEDPNQFSYPRSQNPT-----NYQVPHQFSNQ 52
           +PNN +   +N      +   PN    N  +PN+ S P   NP      N   P++ SN 
Sbjct: 386 NPNNPNPKKRNPKRRNPNKPKPNKPNPNKPNPNEPSNPNKPNPNEPSNPNKPNPNEPSNP 445

Query: 53  RPQNPNYFQVPHQFSNQHPQNPNYYPDPNQYSNQSS 88
              NPN    P++ +   P NPN   +PN+ SN ++
Sbjct: 446 NKPNPNEPSNPNKPNPNEPLNPNEPSNPNEPSNPNA 481



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 40/155 (25%), Positives = 62/155 (39%), Gaps = 12/155 (7%)

Query: 15  SYPISNQNPNNYEDPNQFSYPRS-QNPTNYQVPHQFSN-QRPQNPNYFQVPHQFSN---- 68
           S P    NPN+  DPN  + P +  NP N   P+  +N   P NPN    P+  +N    
Sbjct: 298 SNPEEPVNPNDPNDPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNP 357

Query: 69  ---QHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTP-QSSGYMPMVRANFPSVD 124
               +P NPN   +PN  +N ++  PN   +  +     + P + +   P      P+  
Sbjct: 358 NNPNNPNNPNNPNNPNNPNNPNN--PNDPSNPNNPNPKKRNPKRRNPNKPKPNKPNPNKP 415

Query: 125 GPEFPEFSTQVNLGDGSADNEVNEVTPKSKKTHAP 159
            P  P    + N  + S  N+ N   P +     P
Sbjct: 416 NPNEPSNPNKPNPNEPSNPNKPNPNEPSNPNKPNP 450



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 27/83 (32%), Positives = 35/83 (41%), Gaps = 5/83 (6%)

Query: 3   PNNHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQV 62
           PN  + N  N    P    NPN   +PN+ S P   NP     P++ +   P NPN    
Sbjct: 407 PNKPNPNKPN----PNEPSNPNK-PNPNEPSNPNKPNPNEPSNPNKPNPNEPSNPNKPNP 461

Query: 63  PHQFSNQHPQNPNYYPDPNQYSN 85
               +   P NPN   +PN  SN
Sbjct: 462 NEPLNPNEPSNPNEPSNPNAPSN 484



 Score = 37.7 bits (86), Expect = 0.021
 Identities = 36/152 (23%), Positives = 60/152 (38%), Gaps = 14/152 (9%)

Query: 4   NNHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSN-QRPQNPNYFQV 62
           N +  +  N  S P    NP    +PN+ S P   NP     P + SN + P NP     
Sbjct: 538 NPNEPSNPNEPSNPEEPSNPKEPSNPNEPSNPEEPNPEEPSNPKEPSNPEEPINPEELN- 596

Query: 63  PHQFSNQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVR-YPSQTPQSSGYMPMVRANFP 121
           P + SN    NP    +P + + +    P  + +   ++  P +    S  +P++     
Sbjct: 597 PKEPSNPEESNPKEPINPEESNPKEPINPEDNENPLIIQDEPIEPRNDSNVIPIL----- 651

Query: 122 SVDGPEFPEFSTQV--NLGDGSADNEVNEVTP 151
               P  P+    +  NL +  +D+EV    P
Sbjct: 652 ----PIIPQKGNNIPSNLPENPSDSEVEYPRP 679



 Score = 32.3 bits (72), Expect = 0.87
 Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 4/111 (3%)

Query: 2   DPNNHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQ 61
           +P+N +  +      P    NP    +P +   P   NP     P + + + P NP    
Sbjct: 559 EPSNPNEPSNPEEPNPEEPSNPKEPSNPEEPINPEELNPKEPSNPEESNPKEPINPEESN 618

Query: 62  VPHQFSNQHPQNPNYYPD-PNQYSNQSSFVP--NFHPSYGSVRYPSQTPQS 109
                + +  +NP    D P +  N S+ +P     P  G+   PS  P++
Sbjct: 619 PKEPINPEDNENPLIIQDEPIEPRNDSNVIPILPIIPQKGN-NIPSNLPEN 668



 Score = 30.4 bits (67), Expect = 3.3
 Identities = 37/155 (23%), Positives = 56/155 (35%), Gaps = 7/155 (4%)

Query: 4   NNHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQVP 63
           N +  +     S P    NPN   +P + +     NP     P +  N    NP     P
Sbjct: 544 NPNEPSNPEEPSNPKEPSNPNEPSNPEEPNPEEPSNPKEPSNPEEPINPEELNPKEPSNP 603

Query: 64  HQFSNQHPQNP---NYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSSGYMPMVRANF 120
            + + + P NP   N     N   N++  +    P     R  S        +P    N 
Sbjct: 604 EESNPKEPINPEESNPKEPINPEDNENPLIIQDEPI--EPRNDSNVIPILPIIPQKGNNI 661

Query: 121 PSVDGPEFPEFSTQVNLGDGSADNEVNEVTPKSKK 155
           PS + PE P   ++V     + + E +  T KSKK
Sbjct: 662 PS-NLPENPS-DSEVEYPRPNDNGENSNNTMKSKK 694


>P65H_MYCGE (P47459) Proline-rich P65 protein homolog
          Length = 372

 Score = 48.9 bits (115), Expect = 9e-06
 Identities = 36/106 (33%), Positives = 48/106 (44%), Gaps = 15/106 (14%)

Query: 2   DPNNHHYN------TQNSSSYPISNQNPNNYEDPNQFSYPRS---QNPTNYQVPHQFSNQ 52
           DPN   +N       Q   + P  + N   Y+DPNQ  + ++   QN   YQ P+Q    
Sbjct: 29  DPNQQQFNQSGFDPNQQQFNQPGFDPNQQYYQDPNQQQFNQAGFDQNQQYYQDPNQQQFN 88

Query: 53  RP---QNPNYFQVPH--QFSNQHPQNPNYYPDPNQYS-NQSSFVPN 92
           +P    N  Y+Q P+  QF+        YY DPNQ   NQS F  N
Sbjct: 89  QPGFDPNQQYYQDPNQQQFNQAGFDQNQYYQDPNQQQFNQSGFDQN 134



 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 36/88 (40%), Positives = 45/88 (50%), Gaps = 10/88 (11%)

Query: 11 QNSSSYPISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPN--YFQVPHQFS- 67
          Q +S+ P +      Y+DPNQ  + +S    N Q   QF NQ   +PN  Y+Q P+Q   
Sbjct: 12 QQASNQPFNQDQNQYYQDPNQQQFNQSGFDPNQQ---QF-NQPGFDPNQQYYQDPNQQQF 67

Query: 68 NQ--HPQNPNYYPDPNQYS-NQSSFVPN 92
          NQ    QN  YY DPNQ   NQ  F PN
Sbjct: 68 NQAGFDQNQQYYQDPNQQQFNQPGFDPN 95


>DRPL_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy
           protein)
          Length = 1183

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 41/146 (28%), Positives = 54/146 (36%), Gaps = 13/146 (8%)

Query: 17  PISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQVP--HQFSNQHPQNP 74
           P     PNN   P  F     Q+  +   P    +Q+ Q P     P  H   N  P  P
Sbjct: 446 PYGRLLPNNNTHPGPFPPTGGQSTAHPPAPAHHHHQQQQQPQPQPQPQQHHHGNSGPPPP 505

Query: 75  NYYPDPNQYSNQSSFVP-NFHPSYGSVR----YPSQTPQSSGYMPMVRANFPSVDGPEFP 129
             YP P + SN     P N  PS GS+R     P+  P S G +   +A      GP  P
Sbjct: 506 GAYPHPLESSNSHHAHPYNMSPSLGSLRPYPPGPAHLPPSHGQVSYSQA------GPNGP 559

Query: 130 EFSTQVNLGDGSADNEVNEVTPKSKK 155
             S+  N    S+    +   P S +
Sbjct: 560 PVSSSSNSSGSSSQAAYSCSHPSSSQ 585


>RPB1_MOUSE (P08775) DNA-directed RNA polymerase II largest subunit
            (EC 2.7.7.6) (RPB1)
          Length = 1970

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 45/158 (28%), Positives = 61/158 (38%), Gaps = 11/158 (6%)

Query: 3    PNNHHYNTQNSSSYPIS-NQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQ 61
            P +  Y+  + S  P S + +P +   P+      S +PT+        N  P +P+Y  
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTS---PSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 1764

Query: 62   VPHQFS----NQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSSGYMPMVR 117
                +S    N  P +PNY P    YS  S       PSY S   P  TPQS  Y P   
Sbjct: 1765 TSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSY-SPSSPRYTPQSPTYTPSSP 1823

Query: 118  ANFPSVDGPEFPEFSTQVNLGDGSADNEVNEVTPKSKK 155
            +  PS   P +   S +      S      E TP S K
Sbjct: 1824 SYSPS--SPSYSPTSPKYTPTSPSYSPSSPEYTPASPK 1859



 Score = 35.4 bits (80), Expect = 0.10
 Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 8/113 (7%)

Query: 3    PNNHHYNTQNSSSYPIS-NQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQ 61
            P +  Y+  + S  P S + +P +   P+      S +PT+        +  P +P+Y  
Sbjct: 1638 PTSPSYSPTSPSYSPTSPSYSPTS---PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694

Query: 62   VPHQFSNQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSSGYMP 114
                +S   P +P+Y P    YS  S       PSY S   PS +P S  Y P
Sbjct: 1695 TSPSYS---PTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSPSYSP 1743



 Score = 35.0 bits (79), Expect = 0.13
 Identities = 31/104 (29%), Positives = 41/104 (38%), Gaps = 11/104 (10%)

Query: 35   PRSQNPTNYQVPHQFSNQRPQNPNYFQVPHQFS----NQHPQNPNYYPDPNQYSNQSSFV 90
            PRS      Q P    +  P +P+Y      +S    N  P +P+Y P    YS  S   
Sbjct: 1602 PRSPGGYTPQSP----SYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSY 1657

Query: 91   PNFHPSYGSVRYPSQTPQSSGYMPMVRANFPSVD--GPEFPEFS 132
                PSY S   PS +P S  Y P   +  P+     P  P +S
Sbjct: 1658 SPTSPSY-SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1700


>RPB1_HUMAN (P24928) DNA-directed RNA polymerase II largest subunit
            (EC 2.7.7.6) (RPB1)
          Length = 1970

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 45/158 (28%), Positives = 61/158 (38%), Gaps = 11/158 (6%)

Query: 3    PNNHHYNTQNSSSYPIS-NQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQ 61
            P +  Y+  + S  P S + +P +   P+      S +PT+        N  P +P+Y  
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTS---PSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 1764

Query: 62   VPHQFS----NQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSSGYMPMVR 117
                +S    N  P +PNY P    YS  S       PSY S   P  TPQS  Y P   
Sbjct: 1765 TSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSY-SPSSPRYTPQSPTYTPSSP 1823

Query: 118  ANFPSVDGPEFPEFSTQVNLGDGSADNEVNEVTPKSKK 155
            +  PS   P +   S +      S      E TP S K
Sbjct: 1824 SYSPS--SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPK 1859



 Score = 35.4 bits (80), Expect = 0.10
 Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 8/113 (7%)

Query: 3    PNNHHYNTQNSSSYPIS-NQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQ 61
            P +  Y+  + S  P S + +P +   P+      S +PT+        +  P +P+Y  
Sbjct: 1638 PTSPSYSPTSPSYSPTSPSYSPTS---PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694

Query: 62   VPHQFSNQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSSGYMP 114
                +S   P +P+Y P    YS  S       PSY S   PS +P S  Y P
Sbjct: 1695 TSPSYS---PTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSPSYSP 1743



 Score = 35.0 bits (79), Expect = 0.13
 Identities = 31/104 (29%), Positives = 41/104 (38%), Gaps = 11/104 (10%)

Query: 35   PRSQNPTNYQVPHQFSNQRPQNPNYFQVPHQFS----NQHPQNPNYYPDPNQYSNQSSFV 90
            PRS      Q P    +  P +P+Y      +S    N  P +P+Y P    YS  S   
Sbjct: 1602 PRSPGGYTPQSP----SYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSY 1657

Query: 91   PNFHPSYGSVRYPSQTPQSSGYMPMVRANFPSVD--GPEFPEFS 132
                PSY S   PS +P S  Y P   +  P+     P  P +S
Sbjct: 1658 SPTSPSY-SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1700


>RPB1_CRIGR (P11414) DNA-directed RNA polymerase II largest subunit
           (EC 2.7.7.6) (RPB1) (Fragment)
          Length = 467

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 45/158 (28%), Positives = 61/158 (38%), Gaps = 11/158 (6%)

Query: 3   PNNHHYNTQNSSSYPIS-NQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQ 61
           P +  Y+  + S  P S + +P +   P+      S +PT+        N  P +P+Y  
Sbjct: 205 PTSPSYSPTSPSYSPTSPSYSPTS---PSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 261

Query: 62  VPHQFS----NQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSSGYMPMVR 117
               +S    N  P +PNY P    YS  S       PSY S   P  TPQS  Y P   
Sbjct: 262 TSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSY-SPSSPRYTPQSPTYTPSSP 320

Query: 118 ANFPSVDGPEFPEFSTQVNLGDGSADNEVNEVTPKSKK 155
           +  PS   P +   S +      S      E TP S K
Sbjct: 321 SYSPS--SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPK 356



 Score = 35.4 bits (80), Expect = 0.10
 Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 8/113 (7%)

Query: 3   PNNHHYNTQNSSSYPIS-NQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQ 61
           P +  Y+  + S  P S + +P +   P+      S +PT+        +  P +P+Y  
Sbjct: 135 PTSPSYSPTSPSYSPTSPSYSPTS---PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 191

Query: 62  VPHQFSNQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSSGYMP 114
               +S   P +P+Y P    YS  S       PSY S   PS +P S  Y P
Sbjct: 192 TSPSYS---PTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSPSYSP 240



 Score = 35.0 bits (79), Expect = 0.13
 Identities = 31/104 (29%), Positives = 41/104 (38%), Gaps = 11/104 (10%)

Query: 35  PRSQNPTNYQVPHQFSNQRPQNPNYFQVPHQFS----NQHPQNPNYYPDPNQYSNQSSFV 90
           PRS      Q P    +  P +P+Y      +S    N  P +P+Y P    YS  S   
Sbjct: 99  PRSPGGYTPQSP----SYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSY 154

Query: 91  PNFHPSYGSVRYPSQTPQSSGYMPMVRANFPSVD--GPEFPEFS 132
               PSY S   PS +P S  Y P   +  P+     P  P +S
Sbjct: 155 SPTSPSY-SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 197


>YDF3_SCHPO (Q10475) Probable eukaryotic initiation factor C17C9.03
          Length = 1403

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 37/117 (31%), Positives = 48/117 (40%), Gaps = 15/117 (12%)

Query: 5   NHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQVPH 64
           N+  N +N S +P    +  NY   NQ +YP     +N +  +Q     PQN N    P 
Sbjct: 327 NNSGNNRNESGHPRFRNSRRNYN--NQGAYPTYM--SNGRSANQSPRNNPQNVNNGSTPI 382

Query: 65  QF--SNQHPQ-----NPNYYPDPN--QYSN--QSSFVPNFHPSYGSVRYPSQTPQSS 110
           Q   S Q P       P Y  DPN  QY    Q  +VP ++P Y    Y    P  S
Sbjct: 383 QIPVSLQTPYGQVYGQPQYIVDPNMVQYGPILQPGYVPQYYPVYHQTPYTQNFPNMS 439


>GLS2_YEAST (P40989) 1,3-beta-glucan synthase component GLS2 (EC
           2.4.1.34) (1,3-beta-D-glucan-UDP glucosyltransferase)
          Length = 1895

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 31/117 (26%), Positives = 48/117 (40%), Gaps = 18/117 (15%)

Query: 10  TQNSSSY-----PISNQNP--NNYEDPNQ-----FSYPRSQNPTNYQVPHQFSNQRPQNP 57
           TQ+ S+Y     PI  QN   + Y DPN+       +P+ Q+P+  Q P+        + 
Sbjct: 30  TQDQSAYDEYGQPIYTQNQLDDGYYDPNEQYVDGTQFPQGQDPSQDQGPYN------NDA 83

Query: 58  NYFQVPHQFSNQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSSGYMP 114
           +Y+  P    N   Q+   + D + Y   S   PN   +   + YP Q   S    P
Sbjct: 84  SYYNQPPNMMNPSSQDGENFSDFSSYGPPSGTYPNDQYTPSQMSYPDQDGSSGASTP 140


>CBPA_DICDI (P35085) Calcium-binding protein
          Length = 467

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 36/127 (28%), Positives = 43/127 (33%), Gaps = 18/127 (14%)

Query: 8   YNTQNSSSYPISNQN-PNNY--EDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQVPH 64
           Y  Q    YP      P  Y  + P Q  YP  Q   + Q P Q    +P  P Y     
Sbjct: 76  YPPQQPGQYPPQQPGAPGQYPPQQPGQPGYPPQQPGQSGQYPPQ----QPGQPGY----- 126

Query: 65  QFSNQHPQNPNYYP----DPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSSGYMPMVRANF 120
               Q P  P  YP     P QY  Q    P  +P     +YP Q P   G  P  +   
Sbjct: 127 --PPQQPGAPGQYPPQQGQPGQYPPQQPGQPGQYPPQQQGQYPPQQPGQPGAYPPQQPGQ 184

Query: 121 PSVDGPE 127
           P    P+
Sbjct: 185 PGAYPPQ 191


>GLT4_WHEAT (P08489) Glutenin, high molecular weight subunit PW212
           precursor
          Length = 838

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 31/97 (31%), Positives = 39/97 (39%), Gaps = 10/97 (10%)

Query: 13  SSSYPISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSN-QRPQNPNYFQVPHQFSNQHP 71
           S  YP S Q P   + P Q      Q P   Q P Q    Q+P      Q P Q      
Sbjct: 307 SGYYPTSPQQPGQGQQPGQL-----QQPAQGQQPEQGQQGQQPGQGQQGQQPGQGQQPGQ 361

Query: 72  QNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQ 108
             P YYP   Q S Q    P ++P+  S + P+Q+ Q
Sbjct: 362 GQPGYYPTSPQQSGQGQ--PGYYPT--SSQQPTQSQQ 394



 Score = 30.4 bits (67), Expect = 3.3
 Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 12/71 (16%)

Query: 16  YPISNQNPNNYEDPNQFS---YPRS-QNPTNYQVPHQFSNQRPQNPNYFQVPHQFSNQHP 71
           YP S Q P  ++ P Q     YP S Q P   Q P Q   Q+P      + P Q      
Sbjct: 153 YPTSPQQPGQWQQPEQGQPGYYPTSPQQPGQLQQPAQ--GQQPGQGQQGRQPGQ------ 204

Query: 72  QNPNYYPDPNQ 82
             P YYP  +Q
Sbjct: 205 GQPGYYPTSSQ 215



 Score = 29.3 bits (64), Expect = 7.3
 Identities = 25/97 (25%), Positives = 34/97 (34%), Gaps = 8/97 (8%)

Query: 16  YPISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQVPHQFSNQHPQNPN 75
           YP S Q P   + P Q+         + Q  H +    PQ     Q P Q+         
Sbjct: 694 YPTSLQQPGQGQQPGQWQ-------QSGQGQHGYYPTSPQLSGQGQRPGQWLQPGQGQQG 746

Query: 76  YYPDPNQYSNQSSFVPNF-HPSYGSVRYPSQTPQSSG 111
           YYP   Q S Q   +  +  P  G   Y   + Q +G
Sbjct: 747 YYPTSPQQSGQGQQLGQWLQPGQGQQGYYPTSLQQTG 783


>RPB1_DICDI (P35084) DNA-directed RNA polymerase II largest subunit
           (EC 2.7.7.6) (Fragment)
          Length = 902

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 9/126 (7%)

Query: 9   NTQNSSSYPISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQVPHQFSN 68
           +  NS  Y  +    ++Y+    F    + +PT+        +  P +P+Y      +S 
Sbjct: 702 SAMNSPGYNANKSYGSSYQ---YFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS- 757

Query: 69  QHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSSGYMPMVRANFPSVD--GP 126
             P +P+Y P    YS  S F     PSY S   PS +P S  Y P   +  P+     P
Sbjct: 758 --PTSPSYSPTSPSYSPTSPFYSPTSPSY-SPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 814

Query: 127 EFPEFS 132
             P +S
Sbjct: 815 TSPSYS 820



 Score = 29.6 bits (65), Expect = 5.6
 Identities = 28/108 (25%), Positives = 46/108 (41%), Gaps = 15/108 (13%)

Query: 3   PNNHHYNTQNSSSYPIS-NQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQ 61
           P +  Y+  + S  P S + +P +   P+      S +PT+        +  P +P+Y  
Sbjct: 793 PTSPSYSPTSPSYSPTSPSYSPTS---PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 849

Query: 62  VPHQFSNQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQS 109
               +S   P +P+Y P    YS  S   P++ PS      PS +P S
Sbjct: 850 TSPSYS---PTSPSYSPSSPSYSPSS---PSYSPS-----SPSYSPSS 886



 Score = 29.3 bits (64), Expect = 7.3
 Identities = 21/91 (23%), Positives = 41/91 (44%), Gaps = 7/91 (7%)

Query: 3   PNNHHYNTQNSSSYPIS-NQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQ 61
           P +  Y+  + S  P S + +P +   P+      S +PT+        +  P +P+Y  
Sbjct: 814 PTSPSYSPTSPSYSPTSPSYSPTS---PSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSP 870

Query: 62  VPHQFSNQHPQNPNYYPDPNQYSNQSSFVPN 92
               +S   P +P+Y P    ++N+ ++ PN
Sbjct: 871 SSPSYS---PSSPSYSPSSPTFTNKYNYQPN 898


>P32_MYCGA (Q49378) P32 adhesin (Cytadhesin P32)
          Length = 294

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 39/155 (25%), Positives = 51/155 (32%), Gaps = 36/155 (23%)

Query: 4   NNHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRSQN-----PTNYQVPHQFS----NQRP 54
           NN           P    NP    +P  F  P   N     P   Q+P Q      NQ  
Sbjct: 143 NNPQMGINQPQINPQFGPNPQQRINPQCFGGPMQPNQMGMRPGFNQMPPQMGGMPPNQMG 202

Query: 55  QNPNYFQVPHQFSNQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGS--------------- 99
             P + Q+P Q     P+ PN+   PNQ  N +   P F P  G                
Sbjct: 203 MRPGFNQMPPQMGGMPPR-PNF---PNQMPNMNQPRPGFRPQPGGGVPMGNKAGGGFNHP 258

Query: 100 --------VRYPSQTPQSSGYMPMVRANFPSVDGP 126
                   + +P+Q      +M   RA FP  +GP
Sbjct: 259 GTPMGPNRMNFPNQGMNQPPHMAGPRAGFPPQNGP 293



 Score = 30.8 bits (68), Expect = 2.5
 Identities = 32/112 (28%), Positives = 42/112 (36%), Gaps = 14/112 (12%)

Query: 38  QNPTNYQVP-HQFSNQRPQNP---NYFQVPHQFSNQHPQNPNYYPDPNQYSNQSSFVPNF 93
           QN T    P  + + Q P  P   N    P    NQ   NP + P+P Q  N   F    
Sbjct: 116 QNKTEAIEPTEEVNTQEPTQPAGVNVANNPQMGINQPQINPQFGPNPQQRINPQCFGGPM 175

Query: 94  HPSYGSVR--YPSQTPQSSGYMPM---VRANF----PSVDG-PEFPEFSTQV 135
            P+   +R  +    PQ  G  P    +R  F    P + G P  P F  Q+
Sbjct: 176 QPNQMGMRPGFNQMPPQMGGMPPNQMGMRPGFNQMPPQMGGMPPRPNFPNQM 227


>YEA7_YEAST (P40002) Hypothetical 72.5 kDa protein in GCN4-WBP1
           intergenic region
          Length = 666

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 36/134 (26%), Positives = 52/134 (37%), Gaps = 30/134 (22%)

Query: 4   NNHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRSQNPTNYQV-------PHQFSNQ---- 52
           NN++ N+ NSS+   SN N NN  + N  +     N  N          P++F N     
Sbjct: 334 NNNNNNSNNSSNSNNSNNNNNNNNNNNNNNNNNINNINNVNTNAGNGNNPNRFHNASFAY 393

Query: 53  -------RPQNPNYFQVPHQFSNQHPQNPNYY--PDPNQYSNQS-------SFVPNFHPS 96
                   PQ       P  ++     NPNYY    PN  +N S       S     HP 
Sbjct: 394 NTTGDFINPQQQGQISYPFYYTTIPINNPNYYTTQPPNPVTNASTNENQGYSTSSTQHPY 453

Query: 97  YGSVRYPSQTPQSS 110
           YG   +P+++  +S
Sbjct: 454 YG---HPTESQSAS 464



 Score = 32.0 bits (71), Expect = 1.1
 Identities = 32/150 (21%), Positives = 63/150 (41%), Gaps = 11/150 (7%)

Query: 1   MDPNNHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYF 60
           M+ N  +YN+ ++S+Y  + +N  +  +        + + T    P   ++Q   +  Y+
Sbjct: 511 MNVNVPYYNS-SASAYKRAQENTTSNTNAEPSGATSTNSGTMLSNPAYANSQYTPSQVYY 569

Query: 61  QVPHQFSNQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSSGYMPMVRANF 120
           Q   Q++    QNP+ Y   +Q+      +P  +P    +  P Q   SSG+      + 
Sbjct: 570 QGFPQYAMASAQNPSMYQHQHQHP-----LPTVYP----IATPQQNIMSSGHTLSTIGSD 620

Query: 121 PSVDGPEFPEFSTQVNLGDGSADNEVNEVT 150
           P     +  E +   N   G A+N +  +T
Sbjct: 621 PQHHHYQ-QEPNDHKNFAMGHANNNILNIT 649


>GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5
           precursor
          Length = 839

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 31/97 (31%), Positives = 39/97 (39%), Gaps = 10/97 (10%)

Query: 13  SSSYPISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQ-FSNQRPQNPNYFQVPHQFSNQHP 71
           S  YP S Q P   + P Q      Q P   Q P Q    Q+P      Q P Q      
Sbjct: 302 SGYYPTSPQQPGQGQQPGQL-----QQPAQGQQPGQGQQGQQPGQGQQGQQPGQGQQPGQ 356

Query: 72  QNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQ 108
             P YYP   Q S Q    P ++P+  S + P+Q+ Q
Sbjct: 357 GQPGYYPTSPQQSGQGQ--PGYYPT--SSQQPTQSQQ 389



 Score = 32.0 bits (71), Expect = 1.1
 Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 12/71 (16%)

Query: 16  YPISNQNPNNYEDPNQFS---YPRS-QNPTNYQVPHQFSNQRPQNPNYFQVPHQFSNQHP 71
           YP S Q P  ++ P Q     YP S Q P   Q P Q   Q+P      Q P Q      
Sbjct: 148 YPTSPQQPGQWQQPEQGQQGYYPTSPQQPGQLQQPAQ--GQQPGQGQQGQQPGQ------ 199

Query: 72  QNPNYYPDPNQ 82
             P YYP  +Q
Sbjct: 200 GQPGYYPTSSQ 210



 Score = 29.3 bits (64), Expect = 7.3
 Identities = 27/99 (27%), Positives = 34/99 (34%), Gaps = 22/99 (22%)

Query: 16  YPISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQVPHQFSNQHPQNPN 75
           YP S+Q P   + P Q            Q       Q+ Q P   Q P Q        P 
Sbjct: 377 YPTSSQQPTQSQQPGQ----------GQQGQQVGQGQQAQQPGQGQQPGQ------GQPG 420

Query: 76  YYPDPNQYSNQSSFVPNFH----PSYGSVRYPSQTPQSS 110
           YYP   Q S Q    P ++       G  + P Q  QS+
Sbjct: 421 YYPTSPQQSGQGQ--PGYYLTSPQQSGQGQQPGQLQQSA 457


>DR48_YEAST (P18899) DDR48 stress protein (DNA damage-responsive
           protein 48) (DDRP 48) (YP 75) (Flocculent specific
           protein)
          Length = 429

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 33/112 (29%), Positives = 45/112 (39%), Gaps = 15/112 (13%)

Query: 4   NNHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQVP 63
           NN  Y + N  SY  SN+  ++Y   N  SY  S N  +Y   +  S     N +Y    
Sbjct: 107 NNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNNNDSYGSNNNDSY---- 162

Query: 64  HQFSNQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVR---YPSQTPQSSGY 112
                    N + Y   N+  N+SS+  N   SYGS     Y S   + S Y
Sbjct: 163 ------GSNNDDSYGSSNK--NKSSYGSNNDDSYGSNNDDSYGSSNKKKSSY 206



 Score = 38.9 bits (89), Expect = 0.009
 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 4   NNHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRSQNPTNY--QVPHQFSNQRPQNPNYFQ 61
           NN  Y + N  SY  SN+  ++Y   N  SY  S N  +Y       + +      +Y  
Sbjct: 226 NNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNNDDSYGSSNKNKSSYGS 285

Query: 62  VPHQFSNQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVR---YPSQTPQSSGY 112
             +  S     N + Y   N+   +SS+  N   SYGS     Y S   + S Y
Sbjct: 286 SSNDDSYGSSNNDDSYGSSNK--KKSSYGSNNDDSYGSNNDDSYGSSNKKKSSY 337



 Score = 34.3 bits (77), Expect = 0.23
 Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 4/96 (4%)

Query: 4   NNHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQVP 63
           N+  Y + N  SY  SN+  ++Y   N  SY  S N  +Y   +  S     + +Y    
Sbjct: 184 NDDSYGSNNDDSYGSSNKKKSSYGSSNNDSY-GSNNDDSYGSNNNDSYGSNNDDSYGSSN 242

Query: 64  HQFSNQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGS 99
            + S+    N + Y   N   N  S+  N   SYGS
Sbjct: 243 KKKSSYGSNNDDSYGSSN---NNDSYGSNNDDSYGS 275



 Score = 32.3 bits (72), Expect = 0.87
 Identities = 15/40 (37%), Positives = 20/40 (49%)

Query: 4   NNHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRSQNPTNY 43
           NN  Y + N  SY  SN+  ++Y   N  SY  S N  +Y
Sbjct: 341 NNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSY 380



 Score = 31.6 bits (70), Expect = 1.5
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)

Query: 4   NNHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRSQNPTNY 43
           NN  Y + N  SY  SN+N N+Y   N   Y  S N  +Y
Sbjct: 376 NNDSYGSNNDDSYGSSNRNKNSYGSSN---YGSSNNDDSY 412



 Score = 31.2 bits (69), Expect = 1.9
 Identities = 24/107 (22%), Positives = 40/107 (36%), Gaps = 10/107 (9%)

Query: 4   NNHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQVP 63
           N+  Y + N  SY  SN+  ++Y   N  SY  + + +      + S+    N + +   
Sbjct: 315 NDDSYGSNNDDSYGSSNKKKSSYGSSNNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSS 374

Query: 64  HQFSNQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSS 110
           +   +    N + Y   N+  N          SYGS  Y S     S
Sbjct: 375 NNNDSYGSNNDDSYGSSNRNKN----------SYGSSNYGSSNNDDS 411


>YI71_DROME (P04282) Hypothetical 51 kDa protein in copia-like
           transposable element 17.6
          Length = 439

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 27/121 (22%)

Query: 7   HYNTQNSSSYPISNQNPNNYEDPNQFSYP----RSQNPTNYQVPHQFSNQRPQNPNYFQV 62
           H   QN S  P  + N N  +  N   YP       +P  YQ P  +      NP Y   
Sbjct: 201 HVQKQNFSDKPQKSFNQNTNQSNNIRKYPTPFLHYNSPIPYQAPQIYQTPPTNNPLY--- 257

Query: 63  PHQFSNQHPQNPNYYPDPNQYSNQSSFVPNFHPS-YGSVRYPSQTPQSSGYMPMVRANFP 121
                 +HP    Y+P+PN           F PS   +V  PSQ  Q++ + P  R NF 
Sbjct: 258 ------RHP--IPYHPNPNNV---------FQPSQQNNVFQPSQ--QNNAFQPNQRTNFT 298

Query: 122 S 122
           S
Sbjct: 299 S 299


>RPB1_DROME (P04052) DNA-directed RNA polymerase II largest subunit
            (EC 2.7.7.6)
          Length = 1887

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 38/127 (29%), Positives = 51/127 (39%), Gaps = 14/127 (11%)

Query: 37   SQNPTNYQVPHQFSNQRPQNPNYF-QVPHQFS-NQHPQNPNYYPDPNQYSNQ--SSFVPN 92
            S +P     P    +  P +PNY    P   S N  P +PNY P    Y++   +S  PN
Sbjct: 1564 SMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPRYASTTPN 1623

Query: 93   FHPSYGSVRYPSQTPQSSGYMPMVRANFPSVDGPEFPEFSTQVNLGDGSADNEVNEVTPK 152
            F+P   S  Y   +P SSGY P      P+V     P F+     G GS           
Sbjct: 1624 FNPQ--STGY---SPSSSGYSPTSPVYSPTVQFQSSPSFA-----GSGSNIYSPGNAYSP 1673

Query: 153  SKKTHAP 159
            S   ++P
Sbjct: 1674 SSSNYSP 1680



 Score = 32.3 bits (72), Expect = 0.87
 Identities = 21/76 (27%), Positives = 32/76 (41%), Gaps = 3/76 (3%)

Query: 57   PNYFQVPHQFSNQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSSGYMPMV 116
            P YF  P   S   P  P++   P+  S+ S   P++ P++      S  P  S Y P  
Sbjct: 1515 PRYFSPPGHVSAMTPGGPSF--SPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPAS 1572

Query: 117  RANFPSVDGPEFPEFS 132
             +  PS   P  P ++
Sbjct: 1573 PSVSPSY-SPTSPNYT 1587



 Score = 32.3 bits (72), Expect = 0.87
 Identities = 19/56 (33%), Positives = 25/56 (43%), Gaps = 1/56 (1%)

Query: 67   SNQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSSGYMPMVRANFPS 122
            SN  P +P+Y P    YS  S       P Y S   PS +P S  Y P+  +  P+
Sbjct: 1676 SNYSPNSPSYSPTSPSYSPSSPSYSPTSPCY-SPTSPSYSPTSPNYTPVTPSYSPT 1730


>P32_MYCGE (Q49417) P32 adhesin (Cytadhesin P32)
          Length = 280

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 33/118 (27%), Positives = 42/118 (34%), Gaps = 21/118 (17%)

Query: 8   YNTQNSSSYPISNQNPN---NYE----DPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNY- 59
           +N  N    P +N NP    N +    +PN    P    P     PH   N R  NPN  
Sbjct: 173 FNQPNQQFQPHNNFNPRMNPNMQRPGFNPNMQQRPGFNQPNQQFQPHNNFNPR-MNPNMQ 231

Query: 60  ---FQVPHQFSNQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSSGYMP 114
              F  PH         PN +  PN ++      P F+P+      PSQ     G  P
Sbjct: 232 RPGFNQPH---------PNQFAQPNNFNPNMQQRPGFNPNMQQRPNPSQLMPKGGLKP 280


>CAP1_DICDI (P19198) cAMP binding protein CABP1A/CABP1B (CABP1
           protein)
          Length = 333

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 31/103 (30%), Positives = 40/103 (38%), Gaps = 15/103 (14%)

Query: 5   NHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQVPH 64
           N++Y  Q SS+  +SN NP      NQF  P+  N T  Q P  +  Q+ Q P       
Sbjct: 13  NNNYYRQPSSTPGVSNPNP----QANQFLPPQPSNTT--QTPGGYPPQQQQRP------- 59

Query: 65  QFSNQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTP 107
                 PQ P  YP P        + P   P+      P Q P
Sbjct: 60  --PTGAPQQPGGYPTPPPPGAPGGYPPQQQPAGQYGAPPQQQP 100


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.311    0.129    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,628,716
Number of Sequences: 164201
Number of extensions: 1358503
Number of successful extensions: 4278
Number of sequences better than 10.0: 230
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 208
Number of HSP's that attempted gapping in prelim test: 3416
Number of HSP's gapped (non-prelim): 572
length of query: 217
length of database: 59,974,054
effective HSP length: 106
effective length of query: 111
effective length of database: 42,568,748
effective search space: 4725131028
effective search space used: 4725131028
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)