BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0031.12
(227 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ZRF1_HUMAN (Q99543) Zuotin related factor-1 (M-phase phosphoprot... 45 2e-04
SPEN_DROME (Q8SX83) Split ends protein 44 3e-04
YCF1_OENBE (P31563) Hypothetical protein ycf1 (ORF 1005) (Fragment) 43 7e-04
CYL1_HUMAN (P35663) Cylicin I (Multiple-band polypeptide I) (Fra... 42 0.001
IF2_STAEP (Q8CST4) Translation initiation factor IF-2 42 0.001
B4_XENLA (P15308) B4 protein (Histone H1-like protein) 42 0.002
ZUO1_YEAST (P32527) Zuotin 41 0.002
YLX8_CAEEL (P46504) Hypothetical protein F23F12.8 in chromosome ... 41 0.002
MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC ... 41 0.003
IF2_HELPY (P55972) Translation initiation factor IF-2 41 0.003
BP1E_MOUSE (Q91ZU8) Bullous pemphigoid antigen 1, isoform 5 (BPA... 41 0.003
ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (X-li... 41 0.003
VG01_ICHV1 (Q00132) Hypothetical gene 1 protein 40 0.003
MLP1_YEAST (Q02455) MLP1 protein (Myosin-like protein 1) 40 0.003
YCF1_OENHO (Q9MTH5) Hypothetical 287.9 kDa protein ycf1 40 0.005
MNN4_YEAST (P36044) MNN4 protein 40 0.005
YNJ1_YEAST (P53935) Hypothetical 141.5 kDa protein in YPT53-RHO2... 39 0.008
SFRC_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12 (Se... 39 0.008
YNN6_YEAST (P53911) Hypothetical 49.4 kDa protein in NAM9-FPR1 i... 39 0.010
TRHY_HUMAN (Q07283) Trichohyalin 39 0.013
>ZRF1_HUMAN (Q99543) Zuotin related factor-1 (M-phase phosphoprotein
11)
Length = 568
Score = 44.7 bits (104), Expect = 2e-04
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 17/161 (10%)
Query: 48 KGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREENHKTLPERKHRASNESKAK 107
K N + QR +++ R I + +NA KK +E K E + +A E+K K
Sbjct: 249 KQNGATRAQRKKEEMNR---IRTLVDNAYSC-DPRIKKFKEEEKAKKEAEKKAKAEAKRK 304
Query: 108 TQSKLKKMKRKTQNAGQIMKQTSEK-------IVKKKQKINKKSKTIFTTSTERAKQRNR 160
Q +K ++ A ++ K+ E+ + KK++ I KK+ ER K RN
Sbjct: 305 EQEAKEKQRQAELEAARLAKEKEEEEVRQQALLAKKEKDIQKKA-----IKKERQKLRNS 359
Query: 161 -RITHGEVRFSLTEEENAERVRTRNPNQRENGGVRENGNVN 200
+I + +EE R+R + N ++ G NG+ N
Sbjct: 360 CKIEEINEQIRKEKEEAEARMRQASKNTEKSTGGGGNGSKN 400
>SPEN_DROME (Q8SX83) Split ends protein
Length = 5560
Score = 43.9 bits (102), Expect = 3e-04
Identities = 45/196 (22%), Positives = 87/196 (43%), Gaps = 23/196 (11%)
Query: 2 QVKGSKRLNNEHDEKFTVATLRTLFFFFPFQNTDLEKTEDQASNACKGNNNHKIQRNEQK 61
++K S + + D++ +T ++ P D + +D A A K N H+ ++ E++
Sbjct: 1873 KIKKSDKNASSSDKRKNSSTSQSSKSATPRIEDDSSEADDTADKAEK-NQRHEKEKKERQ 1931
Query: 62 YTRNSKINKITENAAPIITETTKKREENHKTLPERKHRASNESKAKTQSKLKKMKRKTQN 121
R + K E REE + +++ R + KAK + K ++ ++K Q
Sbjct: 1932 EKREKDLRKQVE------------REEKDRKA-QQEEREKEDRKAKEEEKEREREKKAQE 1978
Query: 122 AGQIMKQTSEKIVKKKQKINK--KSKTIFTTSTERAKQRNRRITHGEVR------FSLTE 173
+ K+ E+ +++K++ +K K K I +QR R E+R + E
Sbjct: 1979 DRE-KKEREERELREKEQRDKEQKEKEIREKDLREKEQRERDNREKELRDKDLREKEMRE 2037
Query: 174 EENAERVRTRNPNQRE 189
+E E+ R +QRE
Sbjct: 2038 KEQREKELHREKDQRE 2053
Score = 34.7 bits (78), Expect = 0.19
Identities = 34/192 (17%), Positives = 87/192 (44%), Gaps = 19/192 (9%)
Query: 9 LNNEHDEKFTVATLRTLFFFFPFQNTDLEKTEDQASNACKGNNNHKIQRNEQKYT----- 63
+ EH +K +T ++ ++ +K + +N + ++ KI+++++ +
Sbjct: 1830 VEEEHTKKSGTSTSQSSSSSSKKISSTHDKLHSKHNN--RSESDKKIKKSDKNASSSDKR 1887
Query: 64 RNSKINKITENAAPIITETTKKREENHKTLPERKHRASNESKAKTQSKLKKMKRKTQNAG 123
+NS ++ +++A P I + + + ++ E+ R E K + + + K ++++ +
Sbjct: 1888 KNSSTSQSSKSATPRIEDDSSEADDTADKA-EKNQRHEKEKKERQEKREKDLRKQVEREE 1946
Query: 124 QIMKQTSEKIVKKKQKINKKSKTIFTTSTERAKQRNRRITHGEVRFSLTEEENAERVRTR 183
+ K E+ ++K ++K+K E K+R R E R EE R + +
Sbjct: 1947 KDRKAQQEE----REKEDRKAK-------EEEKEREREKKAQEDREKKEREERELREKEQ 1995
Query: 184 NPNQRENGGVRE 195
+++ +RE
Sbjct: 1996 RDKEQKEKEIRE 2007
Score = 34.7 bits (78), Expect = 0.19
Identities = 36/176 (20%), Positives = 72/176 (40%), Gaps = 17/176 (9%)
Query: 30 PFQNTDLE----KTEDQASNACKGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKK 85
P Q+T +E K +++ +++ KI K +SK N +E+ I KK
Sbjct: 1824 PQQSTFVEEEHTKKSGTSTSQSSSSSSKKISSTHDKL--HSKHNNRSESDKKI-----KK 1876
Query: 86 REENHKTLPERKHRASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKKSK 145
++N + +RK+ ++++S +++ + + ++ +KK++ K+ K
Sbjct: 1877 SDKNASSSDKRKNSSTSQSSKSATPRIEDDSSEADDTADKAEKNQRHEKEKKERQEKREK 1936
Query: 146 TIFTTSTERAKQRNRRITHGEVRFSLTEEENAERVR------TRNPNQRENGGVRE 195
+ K R + E +EE ER R R +RE +RE
Sbjct: 1937 DLRKQVEREEKDRKAQQEEREKEDRKAKEEEKEREREKKAQEDREKKEREERELRE 1992
>YCF1_OENBE (P31563) Hypothetical protein ycf1 (ORF 1005) (Fragment)
Length = 1005
Score = 42.7 bits (99), Expect = 7e-04
Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 50 NNNHKIQRNEQKYTR-NSKINKITENAAPIITETTKKREENHKTLPERKHRASNESKAKT 108
N H + NE+ Y +N+I A P +T K ++N ++K ++ +
Sbjct: 738 NKLHLLFVNERDYPFVKPLVNRINGPAVPKKKKTISKSKQNEIKSKQKKVKSKQKKVKSK 797
Query: 109 QSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTERAKQRNRRITHGEVR 168
Q K+K ++K ++ +K +I K++K+ +K I + E +++N G V+
Sbjct: 798 QKKVKSKQKKVKSKQNEIKSKQNEIKSKQKKVKRKQNEIKSKLNEVKRKQNEIYPKG-VK 856
Query: 169 FSLT 172
F+ T
Sbjct: 857 FNAT 860
Score = 32.3 bits (72), Expect = 0.95
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 89 NHKTLPERKHRASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKI-NKKSKTI 147
N +P++K S + + +SK KK+K K + +K +K+ K++K+ +K+++
Sbjct: 761 NGPAVPKKKKTISKSKQNEIKSKQKKVKSKQKK----VKSKQKKVKSKQKKVKSKQNEIK 816
Query: 148 FTTSTERAKQRNRRITHGEVRFSLTE 173
+ ++KQ+ + E++ L E
Sbjct: 817 SKQNEIKSKQKKVKRKQNEIKSKLNE 842
Score = 29.3 bits (64), Expect = 8.0
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Query: 59 EQKYTRNSKINKITENAAPIITETTKKREENHKTLPERKHRAS--NESKAK---TQSKLK 113
++K SK N+I + ++ K + + K ++K S NE K+K +SK K
Sbjct: 768 KKKTISKSKQNEIKSKQKKVKSKQKKVKSKQKKVKSKQKKVKSKQNEIKSKQNEIKSKQK 827
Query: 114 KMKRKTQNAGQIMKQTSEK---IVKKKQKINKKSKT 146
K+KRK + + K I K K N KT
Sbjct: 828 KVKRKQNEIKSKLNEVKRKQNEIYPKGVKFNATPKT 863
>CYL1_HUMAN (P35663) Cylicin I (Multiple-band polypeptide I)
(Fragment)
Length = 598
Score = 42.4 bits (98), Expect = 0.001
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 13/147 (8%)
Query: 17 FTVATLRTLFFFFPFQNTDLEKTEDQASNACKGNNNHKIQRNEQ--KYTRNSKINKITEN 74
+T A +T F T L+K E + S KG K ++ Y N + +I E
Sbjct: 38 YTAAREQTPFRHLYTSKTHLKKAEYKKSKDEKGGTPLKKDSKKKGGSYATNPESKQIVE- 96
Query: 75 AAPIITETTKKREENHKTLPERKHRASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIV 134
E TK++ E KT + H K+K+ S+ ++QN+ + K S+K
Sbjct: 97 ------EKTKRQNEADKTPLKSSHENEQSKKSKSSSETNP---ESQNSKTVSKNCSQK-D 146
Query: 135 KKKQKINKKSKTIFTTSTERAKQRNRR 161
KK K +KK+ T F + K+ +R
Sbjct: 147 KKDSKNSKKTNTEFLHTKNNPKKDLKR 173
Score = 29.6 bits (65), Expect = 6.1
Identities = 24/124 (19%), Positives = 53/124 (42%), Gaps = 2/124 (1%)
Query: 32 QNTDLEKTEDQASNACKGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREENHK 91
++ + +K E + K +N ++ +E+ +S+ ++ + K +++ K
Sbjct: 361 ESKESQKDEKKDKKDSKTDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDK 420
Query: 92 TLPERKHRASNESKAKTQSKLKKM--KRKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFT 149
+K+ S E ++ + K K K K + I K + + ++ SKT F
Sbjct: 421 KKDAKKNAESTEMESDLELKKDKKHSKEKKGSKKDIKKDARKDTESTDAEFDESSKTGFK 480
Query: 150 TSTE 153
TST+
Sbjct: 481 TSTK 484
>IF2_STAEP (Q8CST4) Translation initiation factor IF-2
Length = 720
Score = 42.0 bits (97), Expect = 0.001
Identities = 22/90 (24%), Positives = 41/90 (45%)
Query: 44 SNACKGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREENHKTLPERKHRASNE 103
++ K N Q N QK N + + ++ TKK+E+N+K + K+ +N+
Sbjct: 52 ASQAKDTNKQNTQNNHQKSNNKQNSNDKEKQQSKNNSKPTKKKEQNNKGKQQNKNNKTNK 111
Query: 104 SKAKTQSKLKKMKRKTQNAGQIMKQTSEKI 133
++ ++K K QN + K+ KI
Sbjct: 112 NQKNNKNKKNNKNNKPQNEVEETKEMPSKI 141
Score = 32.0 bits (71), Expect = 1.2
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 81 ETTKKREENHKTLPERKHRASNESKAKTQSKLKKMKRKTQN-AGQIMKQTSEKIVKKKQK 139
+T K+ +N+ K ++++ K ++++ K K+K QN G+ + ++ +K
Sbjct: 57 DTNKQNTQNNHQKSNNKQNSNDKEKQQSKNNSKPTKKKEQNNKGKQQNKNNKTNKNQKNN 116
Query: 140 INKKS--KTIFTTSTERAKQRNRRITHGEVRFSLTEEENAERVRTRN 184
NKK+ E K+ +IT+ E +T E AE++ +
Sbjct: 117 KNKKNNKNNKPQNEVEETKEMPSKITYQE---GITVGELAEKLNVES 160
>B4_XENLA (P15308) B4 protein (Histone H1-like protein)
Length = 273
Score = 41.6 bits (96), Expect = 0.002
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 9/140 (6%)
Query: 18 TVATLRTLFFFFPFQNTDLEK---TEDQASNACKGNNNHKIQRNEQKYTRNSKINKITEN 74
TV LR F N LEK S+A K+ + K T+ K N +EN
Sbjct: 76 TVDPLRLKFLLRTALNKGLEKGILIRPLNSSATGATGRFKLAK-PVKTTKAGKENVASEN 134
Query: 75 AAPIITETTKKREENHKTLPERKHRASNESKA-KTQSKLKKMKRKTQNAGQIMKQTSEKI 133
P + T+K+ E+K + E K KT++ KK K + ++ K +K
Sbjct: 135 VDPNAEQETQKKAPKK----EKKAKTEKEPKGEKTKAVAKKAKEDSDEKPKVAKSKKDKE 190
Query: 134 VKKKQKINKKSKTIFTTSTE 153
K+ K NK++K + + E
Sbjct: 191 AKEVDKANKEAKEVDKANKE 210
>ZUO1_YEAST (P32527) Zuotin
Length = 433
Score = 41.2 bits (95), Expect = 0.002
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 6/133 (4%)
Query: 29 FPFQNTDLEKTEDQASNACKGNNNHKIQRNEQKYTRNSKINKITENAAP------IITET 82
F F + D+ + +K R+++K N+++ K+ E A + E
Sbjct: 233 FEFLDEDVPDDSSNRDHKRYIERKNKAARDKKKTADNARLVKLVERAVSEDPRIKMFKEE 292
Query: 83 TKKREENHKTLPERKHRASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINK 142
KK +E K E RA E+KAK +++ K A K +K + + K
Sbjct: 293 EKKEKERRKWEREAGARAEAEAKAKAEAEAKAKAESEAKANASAKADKKKAKEAAKAAKK 352
Query: 143 KSKTIFTTSTERA 155
K+K S + A
Sbjct: 353 KNKRAIRNSAKEA 365
>YLX8_CAEEL (P46504) Hypothetical protein F23F12.8 in chromosome III
precursor
Length = 887
Score = 41.2 bits (95), Expect = 0.002
Identities = 27/156 (17%), Positives = 71/156 (45%), Gaps = 6/156 (3%)
Query: 53 HKIQRNEQKYTRNSKINKITENAAPIITETTKKREENHKTLPERKHRASNESKAKTQSKL 112
+ ++ N Q T N +N++ T + ++++E + + + + R E KA+ +
Sbjct: 280 YTVRYNGQTMTENEFLNQLLHIVQHQKTVSERQQQEKFEKMEQERLRQEKEEKARELERR 339
Query: 113 KKMKRKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTERAKQRNRRITHGEVRFSLT 172
+K++ + + + ++++ ++++ + E K+ N R+ E+ ++
Sbjct: 340 RKLEESETARQAELDRQATIYAEQERMAMERNRELERIRLEEKKRENERVRQEEIAMEIS 399
Query: 173 EEENAERVRTRNPNQRENGGVRENGNVNLHSSLSYK 208
+ ER++ QR+N VR+ L ++ YK
Sbjct: 400 KIRELERLQLE--RQRKNERVRQ----ELEAARKYK 429
Score = 30.0 bits (66), Expect = 4.7
Identities = 30/133 (22%), Positives = 56/133 (41%), Gaps = 20/133 (15%)
Query: 56 QRNEQKYTRNSKINKITENAAPIITETTKKREENHKTLPERKH-----RASNESKAKTQS 110
Q +Q+ R ++ + E A E + R+E ER+H R E + K +
Sbjct: 448 QIRQQEEARQEQLRVLEEERA---RELERVRQEEL----ERQHQMEILRQQEEDQKKKKL 500
Query: 111 KLKKMKRKTQNAGQI--------MKQTSEKIVKKKQKINKKSKTIFTTSTERAKQRNRRI 162
+ + +R+ Q A ++ MK+ +K++++K K K + ++ RRI
Sbjct: 501 EKDREQREQQEAEELNRMIIEKEMKENKQKMIEEKNKRKMLEKEMEDRQNAIYEEEERRI 560
Query: 163 THGEVRFSLTEEE 175
E R + EE
Sbjct: 561 AEEERRKQIEIEE 573
>MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC LH)
[Contains: Micronuclear linker histone-alpha;
Micronuclear linker histone-beta; Micronuclear linker
histone-delta; Micronuclear linker histone-gamma]
Length = 633
Score = 40.8 bits (94), Expect = 0.003
Identities = 32/165 (19%), Positives = 61/165 (36%)
Query: 44 SNACKGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREENHKTLPERKHRASNE 103
S + N +QK TR+S T + + K K++ S+
Sbjct: 219 SQSSSSNRRKASSSKDQKGTRSSSRKASNSKGRKNSTSNKRNSSSSSKRSSSSKNKKSSS 278
Query: 104 SKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTERAKQRNRRIT 163
SK K S K K + + + K K K + + SK ++S+ ++ +R +
Sbjct: 279 SKNKKSSSSKGRKSSSSRGRKASSSKNRKSSKSKDRKSSSSKGRKSSSSSKSNKRKASSS 338
Query: 164 HGEVRFSLTEEENAERVRTRNPNQRENGGVRENGNVNLHSSLSYK 208
G S ++++ +N + + + + G SS S K
Sbjct: 339 RGRKSSSSKGRKSSKSQERKNSHADTSKQMEDEGQKRRQSSSSAK 383
Score = 40.0 bits (92), Expect = 0.005
Identities = 33/176 (18%), Positives = 79/176 (44%), Gaps = 10/176 (5%)
Query: 32 QNTDLEKTEDQASNACKGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREEN-- 89
Q++ + + +S KG + + + K +NS NK +++ + ++K ++ +
Sbjct: 220 QSSSSNRRKASSSKDQKGTRSSSRKASNSKGRKNSTSNKRNSSSSSKRSSSSKNKKSSSS 279
Query: 90 -HKTLPERKHRASNESKAKTQSKLKKMK------RKTQNAGQIMKQTSEKIVKKKQKINK 142
+K K R S+ S+ + S K K RK+ ++ +S K K+K ++
Sbjct: 280 KNKKSSSSKGRKSSSSRGRKASSSKNRKSSKSKDRKSSSSKGRKSSSSSKSNKRKASSSR 339
Query: 143 KSKTIFTTSTERAKQRNRRITHGEVRFSLTEEENAERVRTRNPNQRENGGVRENGN 198
K+ + + +K + R+ +H + + E+E +R ++ + +R+ + N
Sbjct: 340 GRKSSSSKGRKSSKSQERKNSHADTSKQM-EDEGQKRRQSSSSAKRDESSKKSRRN 394
Score = 33.5 bits (75), Expect = 0.42
Identities = 31/177 (17%), Positives = 71/177 (39%), Gaps = 8/177 (4%)
Query: 33 NTDLEKTEDQASNACKGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREENHKT 92
+T ++ +S + N K ++ K + +SK K + + + + +N K+
Sbjct: 254 STSNKRNSSSSSKRSSSSKNKKSSSSKNKKSSSSKGRKSSSSRGRKASSS-----KNRKS 308
Query: 93 LPERKHRASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTST 152
+ ++S+ K+ S K KRK ++ +S+ K + K S +
Sbjct: 309 SKSKDRKSSSSKGRKSSSSSKSNKRKASSSRGRKSSSSKGRKSSKSQERKNSHADTSKQM 368
Query: 153 ERAKQRNRRITHGEVRFSLTEE---ENAERVRTRNPNQRENGGVRENGNVNLHSSLS 206
E Q+ R+ + R +++ + + RT+ N + ++G+ + S S
Sbjct: 369 EDEGQKRRQSSSSAKRDESSKKSRRNSMKEARTKKANNKSASKASKSGSKSKGKSAS 425
Score = 31.6 bits (70), Expect = 1.6
Identities = 33/154 (21%), Positives = 57/154 (36%), Gaps = 21/154 (13%)
Query: 37 EKTEDQASNACKGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREENHKTLPER 96
+K +S+A + ++ K +RN K R K N + + A K K
Sbjct: 373 QKRRQSSSSAKRDESSKKSRRNSMKEARTKKANNKSASKA-------SKSGSKSKGKSAS 425
Query: 97 KHRASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTERAK 156
K + + SK K SK + + NA Q T + S+ +T+ R +
Sbjct: 426 KSKGKSSSKGK-NSKSRSASKPKSNAAQNSNNTHQTA--------DSSENASSTTQTRTR 476
Query: 157 QRNRRITHGEVRFSLTEEENAERVRTRNPNQREN 190
R R E + + E+ N++ N + N
Sbjct: 477 GRQR-----EQKDMVNEKSNSKSSSKGKKNSKSN 505
Score = 31.2 bits (69), Expect = 2.1
Identities = 33/190 (17%), Positives = 76/190 (39%), Gaps = 29/190 (15%)
Query: 1 MQVKGSKRLNNEHDEKFTVATLRTLFFFFPFQNTDLEKTEDQASNACKGNNNHKIQRNEQ 60
M+ +K+ NN+ K + + ++ + K++ ++S+ K + + + +
Sbjct: 396 MKEARTKKANNKSASKASKSGSKS-------KGKSASKSKGKSSSKGKNSKSRSASKPKS 448
Query: 61 KYTRNSKINKITENAAPIITETTKKREENHKTLPERKHRASNESKAKTQSKLKKMKRKTQ 120
+NS T +++ + TT+ R + E+K + +S +K+ SK KK
Sbjct: 449 NAAQNSNNTHQTADSSENASSTTQTRTRGRQR--EQKDMVNEKSNSKSSSKGKKNS---- 502
Query: 121 NAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTERAKQRNRRITHGEVRFSLTEEENAERV 180
K + KSK+ + +K + HG R + ++ + +
Sbjct: 503 --------------KSNTRSKSKSKSASKSRKNASKSKKDTTNHG--RQTRSKSRSESKS 546
Query: 181 RTRNPNQREN 190
++ PN+ N
Sbjct: 547 KSEAPNKPSN 556
>IF2_HELPY (P55972) Translation initiation factor IF-2
Length = 944
Score = 40.8 bits (94), Expect = 0.003
Identities = 27/131 (20%), Positives = 63/131 (47%), Gaps = 7/131 (5%)
Query: 58 NEQKYTRNSKINKITENAAPIITETTKKREENHKTLPERKHRASNESKAKTQ-SKLKKMK 116
N K +S+I K + + E K RE +K + ASN + AK + S++KK +
Sbjct: 142 NTPKVVSHSQIEKAKQK----LQEIQKSREALNKLTQSNANNASNANNAKKEISEVKKQE 197
Query: 117 RKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTERAKQRNRRITHGEVRFSLTEEEN 176
++ + I ++T +++K+ ++ +S+ T S + ++ +++ E++
Sbjct: 198 QEIKRHENIKRRTGFRVIKRNDEVENESENSVTES--KKPTQSAAAIFEDIKKEWQEKDK 255
Query: 177 AERVRTRNPNQ 187
E + + P++
Sbjct: 256 QEAKKAKKPSK 266
Score = 32.3 bits (72), Expect = 0.95
Identities = 34/156 (21%), Positives = 59/156 (37%), Gaps = 26/156 (16%)
Query: 91 KTLPERKHRASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKIN--------- 141
K+L ++ + + + K+Q K KK K K K+ I KKK I
Sbjct: 85 KSLNKKVSKTPKKEETKSQPKPKKTKEKK-------KEAPTPIAKKKGGIEIVNTFENQT 137
Query: 142 ----KKSKTIFTTSTERAKQRNRRITHGEVRFSLTEEENAERVRTRNPNQRENGGV-REN 196
K + + E+AKQ+ + I + + NA N ++E V ++
Sbjct: 138 PPTENTPKVVSHSQIEKAKQKLQEIQKSREALNKLTQSNANNASNANNAKKEISEVKKQE 197
Query: 197 GNVNLHSSLSYKSAVCV-----SVSDESVTHCTEGK 227
+ H ++ ++ V V +ES TE K
Sbjct: 198 QEIKRHENIKRRTGFRVIKRNDEVENESENSVTESK 233
>BP1E_MOUSE (Q91ZU8) Bullous pemphigoid antigen 1, isoform 5 (BPA)
(Hemidesmosomal plaque protein) (Dystonia musculorum
protein) (Dystonin)
Length = 2611
Score = 40.8 bits (94), Expect = 0.003
Identities = 33/163 (20%), Positives = 67/163 (40%), Gaps = 19/163 (11%)
Query: 28 FFPFQNTDLEKTEDQASNACKGNNNHK-----IQRNEQKYTRNSKINKITENAAPIITET 82
+ F L++ E++ K N+ H +QR NSK+ ++ E
Sbjct: 1062 YIKFAGDSLKRLEEEEMKRSKENSEHGAYSDLLQRQRATMVENSKLTGKISELETMVAEL 1121
Query: 83 TKKREENHKTLPERKHRASNESKAKTQS--KLKKMKRKTQNAGQIMKQTSEKIVKKKQKI 140
K++ + LP+ K A NE + + ++ + K + ++ + ++ E IV++K+
Sbjct: 1122 KKQKSRVEEELPKVKEAAENELRKQQRNVEDIALQKLRAESEAKQYRRELETIVREKE-- 1179
Query: 141 NKKSKTIFTTSTERAKQRNRRITHGEVRFSLTEEENAERVRTR 183
+ ER +R R++T EEN R++
Sbjct: 1180 ----------AAERELERVRQLTAEAEARRAAVEENLRNFRSQ 1212
Score = 31.2 bits (69), Expect = 2.1
Identities = 35/160 (21%), Positives = 68/160 (41%), Gaps = 36/160 (22%)
Query: 40 EDQASNACKGNN--NHKIQRNEQKYTRNSKINKITENAAPIITETTKKREENHKTLPERK 97
E +A A N N + Q E +TR + + + ++++ + L ++K
Sbjct: 1194 EAEARRAAVEENLRNFRSQLQENTFTRQT------------LEDHLRRKDSSLSDLEQQK 1241
Query: 98 HRASNESKAKT--QSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTERA 155
E + K + +L ++ ++ + KQ +EK +K+KQK+ +++
Sbjct: 1242 RALVEELQRKRDHEEELLRLVKQMERDLAFQKQVAEKQLKEKQKVELEAR---------- 1291
Query: 156 KQRNRRITHGEVRFSLTEEENAERVRTRNPNQRENGGVRE 195
R+IT E++FS E + R QRE G +E
Sbjct: 1292 ----RKIT--EIQFSCRESAAVAQARP----QREQGRQKE 1321
>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog
(X-linked nuclear protein-1)
Length = 1359
Score = 40.8 bits (94), Expect = 0.003
Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 28/149 (18%)
Query: 56 QRNEQKYTRNSKINKITENAAPIITETTKKREENHKTLPERKHRASNESKAKTQSKL--- 112
+ E++ + SK NK E + ET+++ +E+ K P +K + + KAK++S+
Sbjct: 158 ESEEERKVKKSKKNK--EKSVKKRAETSEESDEDEK--PSKKSKKGLKKKAKSESESESE 213
Query: 113 --KKMKRKTQNAGQIMKQTSEKI----VKKKQKINKKSKTIFTTSTERAKQRNRRITHGE 166
K++K+ + + +++K+ SE KKK + K+SKT S+E K
Sbjct: 214 DEKEVKKSKKKSKKVVKKESESEDEAPEKKKTEKRKRSKTSSEESSESEK---------- 263
Query: 167 VRFSLTEEENAERVRTRNPNQRENGGVRE 195
++EE E+ + P +++ V++
Sbjct: 264 -----SDEEEEEKESSPKPKKKKPLAVKK 287
Score = 39.7 bits (91), Expect = 0.006
Identities = 30/155 (19%), Positives = 74/155 (47%), Gaps = 18/155 (11%)
Query: 41 DQASNACKGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREENHKTLPERKHRA 100
D+ + K + K+ + +++ ++ + +E+ K ++++ KT + +
Sbjct: 96 DEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTSSES 155
Query: 101 SNESKAKTQSKLKKMKRKTQNAGQIMKQTSE-------------KIVKKKQKINKKSKTI 147
S ES+ + K+KK K+ + + + +TSE K +KKK K +S++
Sbjct: 156 SEESEE--ERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESESE 213
Query: 148 FTTSTERAKQRNRRITHGEVRFSLTEEENAERVRT 182
+++K++++++ E S +E+E E+ +T
Sbjct: 214 DEKEVKKSKKKSKKVVKKE---SESEDEAPEKKKT 245
Score = 38.1 bits (87), Expect = 0.017
Identities = 32/140 (22%), Positives = 66/140 (46%), Gaps = 6/140 (4%)
Query: 39 TEDQASNACKGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREENHKTLPERKH 98
+ED+ S+ + + K + +K T + + E + ++ K +E++ K E
Sbjct: 127 SEDEDSDEEREQKSKKKSKKTKKQTSSESSEESEEERK--VKKSKKNKEKSVKKRAETSE 184
Query: 99 RASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTERAKQR 158
+ + K +SK K +K+K ++ + + EK VKK +K +KK + S + A ++
Sbjct: 185 ESDEDEKPSKKSK-KGLKKKAKSESE-SESEDEKEVKKSKKKSKKVVKKESESEDEAPEK 242
Query: 159 NRRITHGEVRFSLTEEENAE 178
+ T R + EE++E
Sbjct: 243 KK--TEKRKRSKTSSEESSE 260
Score = 33.5 bits (75), Expect = 0.42
Identities = 22/116 (18%), Positives = 50/116 (42%), Gaps = 4/116 (3%)
Query: 84 KKREENHKTLPERKHRASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKK 143
K E+ ++ E + S K Q K +K K+K + + + E+ +K +K +KK
Sbjct: 87 KSESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKK 146
Query: 144 SKTIFTTSTERAKQRNRRI----THGEVRFSLTEEENAERVRTRNPNQRENGGVRE 195
+K ++ + + R++ + E E + E P+++ G+++
Sbjct: 147 TKKQTSSESSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKK 202
>VG01_ICHV1 (Q00132) Hypothetical gene 1 protein
Length = 862
Score = 40.4 bits (93), Expect = 0.003
Identities = 25/113 (22%), Positives = 52/113 (45%), Gaps = 5/113 (4%)
Query: 80 TETTKKREENHKTLPERKHRASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQK 139
++ + K E+ K P+RK A ++ + + ++ K + G+ K T V KK+K
Sbjct: 639 SKESAKGEDAAKKAPKRKREAEAGTETPKKKQKEEKSEKPKKTGKAEKSTGTAKVTKKEK 698
Query: 140 INKKSKTIFTTSTERAKQRNRRITHGEVRFSLTEEENAERVRTRNPNQRENGG 192
KK T T+ ++N + E ++T +E + ++ ++E+ G
Sbjct: 699 TEKK-----TPQTKSTNKKNVKSVSAEAGTAVTPDEANGKKKSTQVKKKESAG 746
Score = 30.0 bits (66), Expect = 4.7
Identities = 29/129 (22%), Positives = 52/129 (39%), Gaps = 27/129 (20%)
Query: 38 KTEDQASNACK-------GNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREENH 90
K ED A A K G K ++ E+K + K K ++ T K+E+
Sbjct: 644 KGEDAAKKAPKRKREAEAGTETPKKKQKEEKSEKPKKTGKAEKSTG---TAKVTKKEKTE 700
Query: 91 KTLPERKHRASNESKAKTQS---------------KLKKMKRKTQNAGQIMKQTSEKIVK 135
K P+ K ++N+ K+ S K +K ++AGQ + ++
Sbjct: 701 KKTPQTK--STNKKNVKSVSAEAGTAVTPDEANGKKKSTQVKKKESAGQHTTEKKKRTAA 758
Query: 136 KKQKINKKS 144
KK+ +++ S
Sbjct: 759 KKKTVDRPS 767
>MLP1_YEAST (Q02455) MLP1 protein (Myosin-like protein 1)
Length = 1875
Score = 40.4 bits (93), Expect = 0.003
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 18/183 (9%)
Query: 33 NTDLEKTEDQASNACKGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREENHK- 91
N LE +A K + + + E + S IN + E + E K+R+ +
Sbjct: 1387 NNQLEAIRKLQEDAEKASRELQAKLEESTTSYESTINGLNEEITTLKEEIEKQRQIQQQL 1446
Query: 92 --TLPERKHRASN--ESKAKT--QSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKKSK 145
T ++ SN ES K+ + K+K +K KTQ + +EKI++ ++++N+ S
Sbjct: 1447 QATSANEQNDLSNIVESMKKSFEEDKIKFIKEKTQ-------EVNEKILEAQERLNQPS- 1498
Query: 146 TIFTTSTERAKQRNRRITHGEVRFSLTEEENAERVRTRNPNQRENGGVRENGNVNLHSSL 205
+ E K++ EV + E E A + R R P + + + E L
Sbjct: 1499 ---NINMEEIKKKWESEHEQEVSQKIREAEEALKKRIRLPTEEKINKIIERKKEELEKEF 1555
Query: 206 SYK 208
K
Sbjct: 1556 EEK 1558
Score = 30.4 bits (67), Expect = 3.6
Identities = 23/102 (22%), Positives = 45/102 (43%), Gaps = 2/102 (1%)
Query: 58 NEQKYTRNSKINKITENAAPIITETTKKREENHKTLPERKHRASNESKAKTQSKLKKMKR 117
+E K + KI+ + +I E K R+E + T K + K K S+L+ +KR
Sbjct: 68 DELKASSLKKIDGLKTEMENVIRENDKIRKERNDTFV--KFESVENEKMKLSSELEFVKR 125
Query: 118 KTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTERAKQRN 159
K + + K+T + + ++++ K I E + +
Sbjct: 126 KLDDLTEEKKETQSNQQRTLKILDERLKEIELVRVENNRSNS 167
>YCF1_OENHO (Q9MTH5) Hypothetical 287.9 kDa protein ycf1
Length = 2434
Score = 40.0 bits (92), Expect = 0.005
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 39/154 (25%)
Query: 56 QRNEQKYTRNSKINKITENAAPIITETTKKREENHKTLPERKHRASNESKAKTQSKLKKM 115
Q+ EQK +N +I ++ E KKR++ + KH+ E + + + K++
Sbjct: 2029 QKREQKERKNKRIAQLIE----------KKRQKEIE-----KHKRKIEKQMRKKEKIENA 2073
Query: 116 KRKTQNAGQIMKQTSEKIVKKKQK-------------------INKKSKTIFTTSTERAK 156
K+K +N + ++ EK+ K+K+K NK +K + + K
Sbjct: 2074 KKKIENEKKKIETEEEKLEKEKRKKERKKEKLKKKVAKNIEKLKNKVAKNVAKNIEKLKK 2133
Query: 157 QRNRRITHGEVRFSLTEEENAERVRTRNPNQREN 190
QR + I E E++ A + R R +EN
Sbjct: 2134 QRAKNIARLE-----EEDKKARKKRKRKVQVQEN 2162
Score = 32.3 bits (72), Expect = 0.95
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 38 KTEDQASNACKGNNNHKIQRNEQKYTRNSKI--NKITENAAPIITETTKKREENHKTLPE 95
+TE++ K K ++ ++K +N + NK+ +N A I + K+R +N L E
Sbjct: 2085 ETEEEKLEKEKRKKERKKEKLKKKVAKNIEKLKNKVAKNVAKNIEKLKKQRAKNIARLEE 2144
Query: 96 RKHRASNESKAKTQSKLKKM 115
+A + K K Q + K+
Sbjct: 2145 EDKKARKKRKRKVQVQENKI 2164
>MNN4_YEAST (P36044) MNN4 protein
Length = 1178
Score = 40.0 bits (92), Expect = 0.005
Identities = 34/143 (23%), Positives = 59/143 (40%), Gaps = 14/143 (9%)
Query: 37 EKTEDQASNACKGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREENHKTLPER 96
+K +++ K K + E+K + + K E E KK EE K E
Sbjct: 1042 KKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEE-----EKKKKEEEEKKKQEEE 1096
Query: 97 KHRASNESKAKTQSKLKKMKRKTQ----NAGQIMKQTSEKIVKKKQKINKKSKTIFTTST 152
+ + E + K Q + +KMK + + N + K+ E+ KK+++ NKK++
Sbjct: 1097 EKKKKEEEEKKKQEEGEKMKNEDEENKKNEDEEKKKNEEEEKKKQEEKNKKNE-----DE 1151
Query: 153 ERAKQRNRRITHGEVRFSLTEEE 175
E+ KQ E +EE
Sbjct: 1152 EKKKQEEEEKKKNEEEEKKKQEE 1174
Score = 40.0 bits (92), Expect = 0.005
Identities = 34/143 (23%), Positives = 58/143 (39%), Gaps = 15/143 (10%)
Query: 54 KIQRNEQKYTRNSKINKITENAAPIITETTKKREENHKTLPERKHRASNESKAKTQSKLK 113
K + E+K + + K E E KK EE K E + + E + K Q + +
Sbjct: 1043 KKKEEEEKKKKEEEEKKKKEEE-----EKKKKEEEEKKKKEEEEKKKKEEEEKKKQEEEE 1097
Query: 114 KMK-----RKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTERAKQRNRRITHGEVR 168
K K +K Q G+ MK E+ K + + KK++ E+ KQ + + +
Sbjct: 1098 KKKKEEEEKKKQEEGEKMKNEDEENKKNEDEEKKKNE-----EEEKKKQEEKNKKNEDEE 1152
Query: 169 FSLTEEENAERVRTRNPNQRENG 191
EEE ++ ++E G
Sbjct: 1153 KKKQEEEEKKKNEEEEKKKQEEG 1175
Score = 39.3 bits (90), Expect = 0.008
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 7/120 (5%)
Query: 79 ITETTKKREENHKTLPERKHRASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQ 138
+ E K+RE+ K E+K + E K K + + KK + + K+ E+ KKK+
Sbjct: 1033 LLEERKRREKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEE-------KKKKEEEEKKKK 1085
Query: 139 KINKKSKTIFTTSTERAKQRNRRITHGEVRFSLTEEENAERVRTRNPNQRENGGVRENGN 198
+ +K K ++ ++ ++ GE + EE + N+ E +E N
Sbjct: 1086 EEEEKKKQEEEEKKKKEEEEKKKQEEGEKMKNEDEENKKNEDEEKKKNEEEEKKKQEEKN 1145
Score = 35.0 bits (79), Expect = 0.15
Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 3/128 (2%)
Query: 37 EKTEDQASNACKGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREENHKTLPER 96
+K E++ + K + ++K K K E E KK+EE K E
Sbjct: 1052 KKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKQEEEEKKKKEEEEKKKQEE 1111
Query: 97 KHRASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTERAK 156
+ NE + ++K + + K +N + K+ EK K + + KK + E +
Sbjct: 1112 GEKMKNEDE---ENKKNEDEEKKKNEEEEKKKQEEKNKKNEDEEKKKQEEEEKKKNEEEE 1168
Query: 157 QRNRRITH 164
++ + H
Sbjct: 1169 KKKQEEGH 1176
Score = 33.5 bits (75), Expect = 0.42
Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 4/118 (3%)
Query: 32 QNTDLEKTEDQASNACKGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREENHK 91
+ + +K E++ + K + E+K + K E E KK++E +
Sbjct: 1054 EEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKQEEEEKKKKEEEEKKKQEEGE 1113
Query: 92 TL----PERKHRASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKKSK 145
+ E K E K + + KK + K + K+ E+ KKK + +K K
Sbjct: 1114 KMKNEDEENKKNEDEEKKKNEEEEKKKQEEKNKKNEDEEKKKQEEEEKKKNEEEEKKK 1171
>YNJ1_YEAST (P53935) Hypothetical 141.5 kDa protein in YPT53-RHO2
intergenic region
Length = 1240
Score = 39.3 bits (90), Expect = 0.008
Identities = 27/136 (19%), Positives = 63/136 (45%), Gaps = 8/136 (5%)
Query: 60 QKYTRNSKINKITENAAPIITETTKKREENHKTLPERKHRASNESKAKTQSKLKKMKRKT 119
+K N+++ + E + E KKRE+ K ++K E K Q ++ KRK
Sbjct: 617 EKQADNNRLKLLQE----LEEEKRKKREKEEKK--QKKREKEKEKKRLQQLAKEEEKRKR 670
Query: 120 QNAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTERAKQRNRRITHGEVRFSLTEEENAER 179
+ + +K+ E+ ++++ +K + ++ ++R RR+ + R + E++ ++
Sbjct: 671 EEEKERLKKELEEREMRRREAQRKK--VEEAKRKKDEERKRRLEEQQRREEMQEKQRKQK 728
Query: 180 VRTRNPNQRENGGVRE 195
+ + E +RE
Sbjct: 729 EELKRKREEEKKRIRE 744
Score = 32.3 bits (72), Expect = 0.95
Identities = 36/186 (19%), Positives = 77/186 (41%), Gaps = 19/186 (10%)
Query: 37 EKTEDQASNACKGNNNHKIQRNEQKYTRNSKINKITENAAP---IITETTKKREENHKTL 93
EK + + K K + +++ + + ++ A + KK EE + L
Sbjct: 652 EKEKKRLQQLAKEEEKRKREEEKERLKKELEEREMRRREAQRKKVEEAKRKKDEERKRRL 711
Query: 94 PERKHRASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTE 153
E++ R + K + Q + K KR+ + K+ E+ +++K+ K+ +
Sbjct: 712 EEQQRREEMQEKQRKQKEELKRKREEEK-----KRIREQKRLEQEKLQKE---------K 757
Query: 154 RAKQRNRRITHGEVR-FSLTEEENAERVRTRNPNQRENGGVRENGNVNLHSSLSYKSAVC 212
++R R I +R L EE+ + + + P ENG + + + +Y+
Sbjct: 758 EEEERQRLIAEDALRKQKLNEEQTSANILSAKP-FTENGVGNPVSSQSHPNMTNYQEDNS 816
Query: 213 VSVSDE 218
S++DE
Sbjct: 817 CSINDE 822
Score = 31.2 bits (69), Expect = 2.1
Identities = 21/142 (14%), Positives = 61/142 (42%)
Query: 48 KGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREENHKTLPERKHRASNESKAK 107
+ +NN E + + K K + E KKR + E++ R + + K
Sbjct: 619 QADNNRLKLLQELEEEKRKKREKEEKKQKKREKEKEKKRLQQLAKEEEKRKREEEKERLK 678
Query: 108 TQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTERAKQRNRRITHGEV 167
+ + ++M+R+ ++ + +K ++K+++ ++ + +R ++ + E
Sbjct: 679 KELEEREMRRREAQRKKVEEAKRKKDEERKRRLEEQQRREEMQEKQRKQKEELKRKREEE 738
Query: 168 RFSLTEEENAERVRTRNPNQRE 189
+ + E++ E+ + + + E
Sbjct: 739 KKRIREQKRLEQEKLQKEKEEE 760
Score = 29.6 bits (65), Expect = 6.1
Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 10/133 (7%)
Query: 54 KIQRNEQKYTRNSKINKITENAAPIITETTKKREENH-----KTLPERKHRASNESKAKT 108
K + E+K + + K + + E K++ E K L ER+ R + K
Sbjct: 637 KKREKEEKKQKKREKEKEKKRLQQLAKEEEKRKREEEKERLKKELEEREMRRREAQRKKV 696
Query: 109 QSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTERAKQRNRRITHGEVR 168
+ K K+ + ++ +Q + +++KQ +K K E K+R R E
Sbjct: 697 EE--AKRKKDEERKRRLEEQQRREEMQEKQ---RKQKEELKRKREEEKKRIREQKRLEQE 751
Query: 169 FSLTEEENAERVR 181
E+E ER R
Sbjct: 752 KLQKEKEEEERQR 764
>SFRC_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12
(Serine-arginine-rich splicing regulatory protein 86)
(SRrp86)
Length = 494
Score = 39.3 bits (90), Expect = 0.008
Identities = 38/194 (19%), Positives = 78/194 (39%), Gaps = 20/194 (10%)
Query: 35 DLEKTEDQASNACKGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREENHKT-L 93
D EK +++ N K K E+ + + +K E ET +KR++ K+
Sbjct: 289 DREKDKERGKNKDKDREKEKDHEKERDKEKEKEQDKDKEREKDRSKETDEKRKKEKKSRT 348
Query: 94 PERKHRASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTE 153
P R + AS S++ ++ + ++ R + + + + K VK+K + + +
Sbjct: 349 PPRSYNASRRSRSTSRERRRRRSRSSSRSPR-----TSKTVKRKSSRSPSPRGRNKKEKK 403
Query: 154 RAKQRNRRITHGEVRFSLTEEENAERVRTRNPNQRENGGVRENGNVNLHSSLSYKSAVCV 213
R K+R + + R R R+ + +++ G R+ S+ K
Sbjct: 404 REKER--------------DHISDRRERERSTSTKKSSGDRDGKEKVEKSTTPVKEKEHS 449
Query: 214 SVSDESVTHCTEGK 227
SD +V+ + K
Sbjct: 450 KESDATVSKAADEK 463
Score = 30.4 bits (67), Expect = 3.6
Identities = 25/174 (14%), Positives = 70/174 (39%), Gaps = 3/174 (1%)
Query: 40 EDQASNACKGNNNHKIQRNEQKYTRNSKINKI---TENAAPIITETTKKREENHKTLPER 96
E SN KG + R++ + + S + +++ + + ++++ ++
Sbjct: 183 ESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPH 242
Query: 97 KHRASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTERAK 156
K R+ + + K++S+ + ++ ++ ++ EK +K+++ K + + K
Sbjct: 243 KKRSKSRERRKSRSRSRSRDKRKDTREKVKERVKEKEREKEREREKDREKDKERGKNKDK 302
Query: 157 QRNRRITHGEVRFSLTEEENAERVRTRNPNQRENGGVRENGNVNLHSSLSYKSA 210
R + H + R E+E + +E R+ + SY ++
Sbjct: 303 DREKEKDHEKERDKEKEKEQDKDKEREKDRSKETDEKRKKEKKSRTPPRSYNAS 356
>YNN6_YEAST (P53911) Hypothetical 49.4 kDa protein in NAM9-FPR1
intergenic region
Length = 425
Score = 38.9 bits (89), Expect = 0.010
Identities = 38/164 (23%), Positives = 74/164 (44%), Gaps = 7/164 (4%)
Query: 50 NNNHKIQRNEQKYTRNSKINKITENAAPIIT--ETTKKREENHKTLPERKHRASNESKAK 107
N+N+K ++N + EN +PI E K+ + + K L +R+H + E K K
Sbjct: 174 NDNNKQEKNATIKVKELPEYHTEENDSPIDVQKEPIKEVQSDEKEL-QREHMSEEEQKMK 232
Query: 108 TQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTERAKQRNRRITHG-E 166
+ +K RK+Q + + E ++K++I + + ++ + + +ITH E
Sbjct: 233 STNKTAAPVRKSQRLKRSKEVKFED--EEKEEIEEDNTKDEEQKEKKEEIQEPKITHNEE 290
Query: 167 VRFSLTEEENAERVRTRNPN-QRENGGVRENGNVNLHSSLSYKS 209
V E E + R ++ + + NG E + + L Y+S
Sbjct: 291 VDKEKNENEEGDDEREKSTSYENTNGSESEGVDEGVDEELGYES 334
>TRHY_HUMAN (Q07283) Trichohyalin
Length = 1898
Score = 38.5 bits (88), Expect = 0.013
Identities = 31/158 (19%), Positives = 64/158 (39%), Gaps = 13/158 (8%)
Query: 31 FQNTDLEKTEDQASNACKGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREENH 90
+Q + + E++ +CKG+ + EQ R ++ K REE
Sbjct: 180 WQEREERRAEEEQLQSCKGHETEEFPDEEQLRRRE------------LLELRRKGREEKQ 227
Query: 91 KTLPERKHRASNESKAKTQSKLKKMKRKTQNAGQIMK-QTSEKIVKKKQKINKKSKTIFT 149
+ ER+ R E + K K + + RK + Q + Q ++ ++++++ K +
Sbjct: 228 QQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQELR 287
Query: 150 TSTERAKQRNRRITHGEVRFSLTEEENAERVRTRNPNQ 187
+ +Q+ +R+ + EEE E+ R Q
Sbjct: 288 RERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQ 325
Score = 36.2 bits (82), Expect = 0.065
Identities = 39/189 (20%), Positives = 80/189 (41%), Gaps = 26/189 (13%)
Query: 32 QNTDLE-KTEDQASNA-------CKGNNNHKIQRNEQKYTRNSKINKITENAAPIITETT 83
Q +DL+ + E + NA CKG N + ++ E R+ + + ++ E
Sbjct: 1177 QRSDLKWQWEPEKENAVRDNKVYCKGRENEQFRQLEDSQVRDRQSQQDLQHLLGEQQERD 1236
Query: 84 KKREENHKTLPERKHRASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKK 143
+++E R + + + Q + K+ RK+Q Q++++ E+ +++Q+ ++K
Sbjct: 1237 REQERRRWQQANRHFPEEEQLEREEQKEAKRRDRKSQEEKQLLREEREE-KRRRQETDRK 1295
Query: 144 SKTIFTTSTERAKQ-----------RNRRITHGEVRFSLTEEENAERVRTRNPNQRENGG 192
+ ER +Q R + H E EEE +R+R +RE
Sbjct: 1296 FREEEQLLQEREEQPLLRQERDRKFREEELLHQEQGRKFLEEE--QRLR----EERERKF 1349
Query: 193 VRENGNVNL 201
++E + L
Sbjct: 1350 LKEEQQLRL 1358
Score = 33.5 bits (75), Expect = 0.42
Identities = 26/158 (16%), Positives = 66/158 (41%), Gaps = 3/158 (1%)
Query: 32 QNTDLEKTEDQASNACKGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREENHK 91
Q +L + E+Q+ + + +R+E+ + + + + E A + K E +
Sbjct: 144 QERELAEGEEQSEKQERLEQRDRQRRDEELWRQRQEWQEREERRAEEEQLQSCKGHETEE 203
Query: 92 TLPERKHRASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTS 151
E + R + + + + +K +++ + ++ ++ EK +K++ + +K +
Sbjct: 204 FPDEEQLRRRELLELRRKGREEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEE---EKL 260
Query: 152 TERAKQRNRRITHGEVRFSLTEEENAERVRTRNPNQRE 189
E QR R + E + E + R R Q++
Sbjct: 261 QEEEPQRQRELQEEEEQLRKLERQELRRERQEEEQQQQ 298
Score = 32.7 bits (73), Expect = 0.72
Identities = 24/131 (18%), Positives = 58/131 (43%), Gaps = 7/131 (5%)
Query: 38 KTEDQASNACKGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREENHKTLPERK 97
K ++ + + K + EQ+ R + K E + E +K E + L ER+
Sbjct: 1371 KFREEEQQLSRQERDRKFREEEQQVRRQERERKFLEEEQQLRQERHRKFREEEQLLQERE 1430
Query: 98 ----HRASNESK-AKTQSKLKKMKRKTQNAGQIMK--QTSEKIVKKKQKINKKSKTIFTT 150
HR + K + + +L++ +R + Q ++ + K ++++Q+++++ +
Sbjct: 1431 EQQLHRQERDRKFLEEEQQLRRQERDRKFREQELRSQEPERKFLEEEQQLHRQQRQRKFL 1490
Query: 151 STERAKQRNRR 161
E+ +R R
Sbjct: 1491 QEEQQLRRQER 1501
Score = 32.3 bits (72), Expect = 0.95
Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 27/203 (13%)
Query: 7 KRLNNEHDEKFTVATLRTLFFFFPFQNTDLEKTEDQASNACKGN-NNHKIQRNEQKYTRN 65
+RL EH+E+ L E+ ++QA K + Q + R
Sbjct: 689 QRLKREHEEERREQELA-------------EEEQEQARERIKSRIPKWQWQLESEADARQ 735
Query: 66 SKINKITENA----APIITETTKKRE-ENHKTLPERKHRASNESKAKT------QSKLKK 114
SK+ A AP E ++RE E ER HR E + + Q++ K
Sbjct: 736 SKVLLEAPQAGRAEAPQEQEEKRRRESELQWQEEERAHRQQQEEEQRRDFTWQWQAEEKS 795
Query: 115 MK-RKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTERAKQRNRRITHGEVRFSLTE 173
+ R+ +A +++ E+ ++ +++ ++ + + + + R RR E++F L E
Sbjct: 796 ERGRQRLSARPPLREQRERQLRAEERQQREQRFLPEEEEKEQRGRQRREREKELQF-LEE 854
Query: 174 EENAERVRTRNPNQRENGGVREN 196
EE +R Q E G++E+
Sbjct: 855 EEQLQRRERAQQLQEEEDGLQED 877
Score = 32.3 bits (72), Expect = 0.95
Identities = 20/106 (18%), Positives = 49/106 (45%), Gaps = 6/106 (5%)
Query: 84 KKREENHKTLPERKHRASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKK 143
++RE+ + ER++R + + + + L++ + K + +Q E+ +K +K+ +K
Sbjct: 933 EEREKRRRQEQERQYREEEQLQQEEEQLLREEREKRR------RQERERQYRKDKKLQQK 986
Query: 144 SKTIFTTSTERAKQRNRRITHGEVRFSLTEEENAERVRTRNPNQRE 189
+ + E+ +++ R + E EEE R ++E
Sbjct: 987 EEQLLGEEPEKRRRQEREKKYREEEELQQEEEQLLREEREKRRRQE 1032
Score = 32.0 bits (71), Expect = 1.2
Identities = 25/132 (18%), Positives = 60/132 (44%), Gaps = 6/132 (4%)
Query: 56 QRNEQKYTRNSKINKITENAAPIITETTKKREENHKTLPERKHRASNESKAKTQSKLKKM 115
Q E+K+ ++ + TE E +K E + PER+ + + + + ++
Sbjct: 1674 QELERKFREEEQLRQETEQEQLRRQERYRKILEEEQLRPEREEQQLRRQERDRKFREEEQ 1733
Query: 116 KRKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFTTSTERAKQRNRRITHGEVRFSLTEEE 175
R+ + Q+ Q S++ ++++++ ++ + R +QR+ + E + L E+E
Sbjct: 1734 LRQGREEQQLRSQESDRKFREEEQLRQERE----EQQLRPQQRDGKYRWEEEQLQLEEQE 1789
Query: 176 NAERVRTRNPNQ 187
+R+R Q
Sbjct: 1790 --QRLRQERDRQ 1799
Score = 29.6 bits (65), Expect = 6.1
Identities = 30/166 (18%), Positives = 74/166 (44%), Gaps = 25/166 (15%)
Query: 30 PFQNTDLEKTEDQASNACKGNNNHKIQRNEQKYTRNSKINKITENAAPIITETTKKREEN 89
P + +L++ E+Q + + Q EQ+ R + ++ + ++RE+
Sbjct: 265 PQRQRELQEEEEQLRKLERQELRRERQEEEQQQQRLRREQQLRRK------QEEERREQQ 318
Query: 90 HKTLPERKHRASNESKAKTQSKLKKMKRKTQNAGQIMKQTSEKIVKKKQKINKKSKTIFT 149
+ +++ R E + + Q + ++ +R+ Q Q+ ++ E+ +++Q++ ++ +
Sbjct: 319 EERREQQERREQQEERREQQLRREQEERREQ---QLRREQEEE--RREQQLRREQE---- 369
Query: 150 TSTERAKQRNRRITHGEVRFSLTEEENAERVRTRNPNQRENGGVRE 195
ER +Q+ RR EE +++R +RE RE
Sbjct: 370 --EERREQQLRR--------EQEEERREQQLRREQQLRREQQLRRE 405
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.307 0.122 0.323
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,564,466
Number of Sequences: 164201
Number of extensions: 907792
Number of successful extensions: 5756
Number of sequences better than 10.0: 478
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 407
Number of HSP's that attempted gapping in prelim test: 4849
Number of HSP's gapped (non-prelim): 1044
length of query: 227
length of database: 59,974,054
effective HSP length: 106
effective length of query: 121
effective length of database: 42,568,748
effective search space: 5150818508
effective search space used: 5150818508
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)
Lotus: description of TM0031.12