BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0029a.7
         (411 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

LON2_THEVO (P58275) Putative protease La homolog type 2 (EC 3.4....    32  2.3
HGH1_YEAST (P48362) HGH1 protein                                       31  5.0
SPRI_DROME (Q8MQW8) Protein Sprint (SH2 poly-proline containing ...    31  6.6
Y415_BORBU (O51376) Probable protein-glutamate methylesterase BB...    30  8.6
NTRC_BRASR (P10576) Nitrogen assimilation regulatory protein           30  8.6
JJ2A_MOUSE (Q8BW72) Jumonji domain containing protein 2A (Fragment)    30  8.6

>LON2_THEVO (P58275) Putative protease La homolog type 2 (EC
           3.4.21.-)
          Length = 495

 Score = 32.3 bits (72), Expect = 2.3
 Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 41/174 (23%)

Query: 227 VFPM--RFPRGYGAQKKVRFWMDEF--------HKLPYISPYADSSKIDPNSDLMEKRVV 276
           VFP+  R P+  GA  +V     +F        + LPYI        + P    +  R+V
Sbjct: 303 VFPITGRNPQSAGASVRVDKVPADFILVAACNINDLPYI--------LSP----LRSRIV 350

Query: 277 GVLHELLSLTMHKKTKRN---YLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVTL 333
           G  +E+L  T  K T+ N   YL+ + +E+N+  K               +      + +
Sbjct: 351 GNGYEILMKTTMKDTEENRMKYLQFIAQEINMDGKIPH------------MTMDAAQLII 398

Query: 334 REGYARGKLVDPHPLVRHRDKFYHVMKTGLLYRGDGSIPKPEGGALLLDEIGDE 387
            EG  R KL+D     ++ +    + + G L R  G I   +G  L+  E  +E
Sbjct: 399 EEGRKRAKLIDR----KNNELTLRLRELGGLIRAAGDIAVFKGNKLIDKEDVEE 448


>HGH1_YEAST (P48362) HGH1 protein
          Length = 394

 Score = 31.2 bits (69), Expect = 5.0
 Identities = 28/72 (38%), Positives = 37/72 (50%), Gaps = 4/72 (5%)

Query: 329 TTVTLREGYARGKLVDPHPLVRHRDKFYHVMKTG-LLYRGDGSIPKPEGGALLLDEIGDE 387
           TT   RE Y R K V  +PLVR   K       G L YR    + + E GA  ++E+  +
Sbjct: 312 TTHAGRE-YLRDKSV--YPLVRELHKNVENEDIGELCYRIVNMLMRGEPGAGAVEEMPSK 368

Query: 388 GSEEEEVETSDE 399
            +EEEE E S+E
Sbjct: 369 NAEEEEEEESEE 380


>SPRI_DROME (Q8MQW8) Protein Sprint (SH2 poly-proline containing
           Ras-interactor protein)
          Length = 1790

 Score = 30.8 bits (68), Expect = 6.6
 Identities = 16/40 (40%), Positives = 18/40 (45%)

Query: 371 IPKPEGGALLLDEIGDEGSEEEEVETSDEFSEGEVSGSDS 410
           +   EGG L   E   E  EEE VE  DE  E     SD+
Sbjct: 416 VSSSEGGILAEGETSSEDDEEEPVEAEDEGEESSRDSSDN 455


>Y415_BORBU (O51376) Probable protein-glutamate methylesterase
           BB0415 (EC 3.1.1.61)
          Length = 375

 Score = 30.4 bits (67), Expect = 8.6
 Identities = 24/101 (23%), Positives = 44/101 (42%), Gaps = 13/101 (12%)

Query: 304 NLPHKFTRIFTR-YPGIFYLSLKCKTTTVTLREGYARGKLVDPHPLVRHRDKFY------ 356
           ++P  FT  F +    +  +S+K  T    L++GYA       H  ++  D  Y      
Sbjct: 221 HMPKGFTEEFAKNLNNLCKISVKETTNNEILKQGYAYISSGGYHTKIKKIDGNYQIKTLD 280

Query: 357 ------HVMKTGLLYRGDGSIPKPEGGALLLDEIGDEGSEE 391
                 H    G+L++    I K +  A+++  +G++GS E
Sbjct: 281 GKHINGHKPSIGVLFQSIAEIAKDKAIAIIMTGMGNDGSRE 321


>NTRC_BRASR (P10576) Nitrogen assimilation regulatory protein
          Length = 480

 Score = 30.4 bits (67), Expect = 8.6
 Identities = 15/32 (46%), Positives = 17/32 (52%)

Query: 361 TGLLYRGDGSIPKPEGGALLLDEIGDEGSEEE 392
           TG   R  G   + EGG L LDEIGD   E +
Sbjct: 218 TGANTRASGRFEQAEGGTLFLDEIGDMPMEAQ 249


>JJ2A_MOUSE (Q8BW72) Jumonji domain containing protein 2A (Fragment)
          Length = 1036

 Score = 30.4 bits (67), Expect = 8.6
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 6/47 (12%)

Query: 368 DGSIPKPEGGALLLDE------IGDEGSEEEEVETSDEFSEGEVSGS 408
           D ++P PE    L D        G E   EE+VE +D+  EG+V  S
Sbjct: 342 DHTLPTPEAAEFLKDSGGLTPRAGSEECPEEDVEAADQGEEGDVKRS 388


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.320    0.138    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,542,927
Number of Sequences: 164201
Number of extensions: 2234702
Number of successful extensions: 5922
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 5917
Number of HSP's gapped (non-prelim): 8
length of query: 411
length of database: 59,974,054
effective HSP length: 113
effective length of query: 298
effective length of database: 41,419,341
effective search space: 12342963618
effective search space used: 12342963618
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)