BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0016.9
         (219 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

YTX2_XENLA (P14381) Transposon TX1 hypothetical 149 kDa protein ...    39  0.009
SYS_METMP (O30520) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--...    29  7.5
HTPG_MYCLE (O33012) Chaperone protein htpG (Heat shock protein h...    29  7.5
YJ31_VIBCH (Q9KQR7) Hypothetical UPF0061 protein VC1931                29  9.8
TMS6_MOUSE (Q9DBI0) Transmembrane protease, serine 6 (EC 3.4.21....    29  9.8
TMS6_HUMAN (Q8IU80) Transmembrane protease, serine 6 (EC 3.4.21....    29  9.8

>YTX2_XENLA (P14381) Transposon TX1 hypothetical 149 kDa protein
           (ORF 2)
          Length = 1308

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 39/141 (27%), Positives = 61/141 (42%), Gaps = 16/141 (11%)

Query: 1   IGGDFNAILNDGERKGLNSNTYGDVHFKHFVETYALIDLPLGND----EFTWGSTR-GDG 55
           IGGDFN  L+  +R         +   +  +  ++L+D+    +     FT+   R G  
Sbjct: 140 IGGDFNYTLDARDRNVPKKRDSSESVLRELIAHFSLVDVWREQNPETVAFTYVRVRDGHV 199

Query: 56  LWSKIDRWLVNDEAILQFDGAT----QSADHRPVSLALGSHDFGPK-PFCFFNYWLMED- 109
             S+IDR  ++   + +   +T      +DH  VSL +      PK  +  FN  L+ED 
Sbjct: 200 SQSRIDRIYISSHLMSRAQSSTIRLAPFSDHNCVSLRMSIAPSLPKAAYWHFNNSLLEDE 259

Query: 110 GFKKMVEEWWSSAVVEGWSNF 130
           GF K V + W      GW  F
Sbjct: 260 GFAKSVRDTW-----RGWRAF 275


>SYS_METMP (O30520) Seryl-tRNA synthetase (EC 6.1.1.11)
           (Serine--tRNA ligase) (SerRS)
          Length = 514

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 19/53 (35%), Positives = 26/53 (48%), Gaps = 8/53 (15%)

Query: 13  ERKGLNSNTYGDVHFKHFVETYALIDLPLGNDEFTWGSTRGDGLWSKIDRWLV 65
           ERKG+ + T  ++H  HFVE + + D     D   W    G GL     RWL+
Sbjct: 436 ERKGV-AVTSANIHGTHFVEGFGIKDY---KDRKVWTGCTGYGL----SRWLI 480


>HTPG_MYCLE (O33012) Chaperone protein htpG (Heat shock protein
           htpG) (High temperature protein G)
          Length = 656

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 24/120 (20%), Positives = 45/120 (37%), Gaps = 13/120 (10%)

Query: 62  RWLVNDEAILQFDGATQSADHRPVSLALGSHDFGPKPFCFFNYWLMEDGFKKMVEEWWSS 121
           RW  + EA    +   ++     V+L L   DF             ED       EW   
Sbjct: 160 RWSSDGEATYTIESVDEAPQGTSVTLHLKPEDF-------------EDELHDYTSEWKIR 206

Query: 122 AVVEGWSNFALMQKLKGLKVKIREWKENRGIRGSEKIKGLEDNLHEGECLVTKIKDSLAQ 181
            +V+ +S+F        ++ +     +  G  G E++      ++  + L TK KD +++
Sbjct: 207 ELVKKYSDFIAWPIRMEVERRAPATSDGEGADGEEQVTIETQTINSMKALWTKSKDEVSE 266


>YJ31_VIBCH (Q9KQR7) Hypothetical UPF0061 protein VC1931
          Length = 489

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 66 NDEAILQFDGATQSADHRPVSLALGSHDFG 95
          NDE +L   G    AD  PV++    H FG
Sbjct: 52 NDELLLSLSGQQLPADFSPVAMKYAGHQFG 81


>TMS6_MOUSE (Q9DBI0) Transmembrane protease, serine 6 (EC 3.4.21.-)
           (Matriptase-2)
          Length = 811

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 67  DEAILQFDG-ATQSADHRPVSLALGSHDFGPKPFCFFNYW 105
           D A+LQ D     SA  RPV L   SH F P   C+   W
Sbjct: 668 DVALLQLDHPVVYSATVRPVCLPARSHFFEPGQHCWITGW 707


>TMS6_HUMAN (Q8IU80) Transmembrane protease, serine 6 (EC 3.4.21.-)
           (Matriptase-2)
          Length = 811

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 12/70 (17%)

Query: 48  WGSTRGDGLWS-KIDRWLVN----------DEAILQFDG-ATQSADHRPVSLALGSHDFG 95
           W ++R  G  S K+ R L++          D A+LQ D    +SA  RPV L   SH F 
Sbjct: 638 WQNSRWPGEVSFKVSRLLLHPYHEEDSHDYDVALLQLDHPVVRSAAVRPVCLPARSHFFE 697

Query: 96  PKPFCFFNYW 105
           P   C+   W
Sbjct: 698 PGLHCWITGW 707


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.329    0.145    0.479 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,143,742
Number of Sequences: 164201
Number of extensions: 1125336
Number of successful extensions: 2588
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2585
Number of HSP's gapped (non-prelim): 7
length of query: 219
length of database: 59,974,054
effective HSP length: 106
effective length of query: 113
effective length of database: 42,568,748
effective search space: 4810268524
effective search space used: 4810268524
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 63 (28.9 bits)