BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0012a.1
         (263 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TTCG_HUMAN (Q8NEE8) Tetratricopeptide repeat protein 16 (TPR rep...    40  0.004
UN89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoo...    40  0.006
TTCG_MACFA (Q95LZ5) Tetratricopeptide repeat protein 16 (TPR rep...    39  0.017
TCG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA b...    38  0.022
RL22_MYCPA (Q73SA9) 50S ribosomal protein L22                          38  0.022
POGZ_HUMAN (Q7Z3K3) Pogo transposable element with ZNF domain (N...    38  0.029
WSC4_YEAST (P38739) Cell wall integrity and stress response comp...    37  0.049
PODX_RAT (Q9WTQ2) Podocalyxin precursor                                37  0.049
CIZ1_HUMAN (Q9ULV3) Cip1-interacting zinc finger protein (Nuclea...    37  0.064
EGT2_YEAST (P42835) EGT2 protein precursor (Early G1 transcript 2)     36  0.083
TRPL_CAEEL (P34586) Transient-receptor-potential like protein (T...    36  0.11
POGZ_MOUSE (Q8BZH4) Pogo transposable element with ZNF domain          36  0.11
AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor          36  0.11
YQU3_CAEEL (Q09550) Hypothetical protein F26C11.3 in chromosome II     35  0.14
FA5_BOVIN (Q28107) Coagulation factor V precursor (Activated pro...    35  0.14
RRPP_PI1HD (P32531) RNA polymerase alpha subunit (EC 2.7.7.48) (...    35  0.19
AMYH_YEAST (P08640) Glucoamylase S1/S2 precursor (EC 3.2.1.3) (G...    35  0.24
YS89_CAEEL (Q09624) Hypothetical protein ZK945.9 in chromosome II      34  0.32
YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I    34  0.32
MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC ...    34  0.32

>TTCG_HUMAN (Q8NEE8) Tetratricopeptide repeat protein 16 (TPR repeat
           protein 16)
          Length = 873

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 20/120 (16%)

Query: 125 RASNNQGRRTMLPSEGTRTSLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTL 184
           R + + G R +  ++G R SL K   TQ +   S +KTKA         T+ KR SSKT 
Sbjct: 662 REALSHGPRKIKATQGQRQSLSKTEPTQSQRRNS-SKTKA---------TIHKRNSSKTK 711

Query: 185 LPSSQVIRTSKTRS----------LEKISGNKVATDILSVSTPPRQHPEIRHSSPGERTR 234
              SQ   +SKTR+           E   G + ++  +  +  PRQ P    ++   R R
Sbjct: 712 ATQSQRRNSSKTRATQGQGQSSSKTEATQGQRQSSSEIEATQGPRQEPSKTKTTRSPRQR 771


>UN89_CAEEL (O01761) Muscle M-line assembly protein unc-89
            (Uncoordinated protein 89)
          Length = 6632

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 61/251 (24%), Positives = 103/251 (40%), Gaps = 48/251 (19%)

Query: 45   VPKSGTDEEAKELTKAEPSVNNKESSNSVVPGINEEDP--PTSKTVSLALIFLGLPRERE 102
            +PK   D + K+  K  PS + KE S    P   EE P  PT KT       +  P+E+ 
Sbjct: 1362 LPKEVIDSDRKK--KKSPSPDKKEKS----PEKTEEKPASPTKKTGEE----VKSPKEKS 1411

Query: 103  LLKAHHK-RTCHIRYIHPQRRQERASNNQGRRTMLPSEGTRT--------SLPKLPSTQL 153
                  K ++     +    ++E++ ++  ++   PS  T+         S PK P+ + 
Sbjct: 1412 PASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKE 1471

Query: 154  KSSP------SPAKTKASSDHRSLT-----TTLGKRQSSKT--LLPSSQVIRTS--KTRS 198
            KS        SP K + S D  ++      TT+ K +++ T  +   S+  RTS  K ++
Sbjct: 1472 KSPEKPEDVKSPVKKEKSPDATNIVEVSSETTIEKTETTMTTEMTHESEESRTSVKKEKT 1531

Query: 199  LEKI------------SGNKVATDILSVSTPPRQHPEIRHSSPGERTRTLCSPCFPTTTS 246
             EK+            S  K  T+ +       + PE     P   T+   SP  P + +
Sbjct: 1532 PEKVDEKPKSPTKKDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPT 1591

Query: 247  RQEKVEGKDPT 257
            ++ + E K PT
Sbjct: 1592 KKSENEVKSPT 1602


>TTCG_MACFA (Q95LZ5) Tetratricopeptide repeat protein 16 (TPR repeat
           protein 16) (QtsA-13222)
          Length = 872

 Score = 38.5 bits (88), Expect = 0.017
 Identities = 35/110 (31%), Positives = 51/110 (45%), Gaps = 13/110 (11%)

Query: 125 RASNNQGRRTMLPSEGTRTSLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTL 184
           R + + G R +   +G R SL K  +TQ     + +KTKA++ HR        R SSKT 
Sbjct: 674 REALSHGPRKIKDIQGQRQSLSKTQATQ-SQRQNFSKTKAAA-HR--------RNSSKTK 723

Query: 185 LPSSQVIRTSKTRSLEKISGNKVATDILSVSTPPRQHPEIRHSSPGERTR 234
               Q  R+SKT   E   G + ++  +  S  PRQ P    ++   R R
Sbjct: 724 ATQGQGRRSSKT---EATQGQRQSSSEIETSQGPRQEPSKTKTTRSPRQR 770


>TCG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA
           box-binding protein-associated factor 2S) (Transcription
           factor CA150)
          Length = 1098

 Score = 38.1 bits (87), Expect = 0.022
 Identities = 33/108 (30%), Positives = 47/108 (42%), Gaps = 22/108 (20%)

Query: 150 STQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTLLPSSQVIRTSKTRSLEKISGNKVAT 209
           ST   SSP+PA + ++S     +TT     ++ T    +Q + T  T+     S   VAT
Sbjct: 259 STPTTSSPAPAVSTSTSSSTPSSTT----STTTTATSVAQTVSTPTTQDQTPSSAVSVAT 314

Query: 210 DILSVSTP----------PRQHPE-----IRHSSPGERTRTLCSPCFP 242
             +SVSTP          P+ HP+     + HS P     T   P FP
Sbjct: 315 PTVSVSTPARTATPVQTVPQPHPQTLPPAVPHSVP---QPTTAIPAFP 359


>RL22_MYCPA (Q73SA9) 50S ribosomal protein L22
          Length = 180

 Score = 38.1 bits (87), Expect = 0.022
 Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 14/125 (11%)

Query: 46  PKSGTDEEAKELTKAEPSVNNK---ESSNSVVPGINEEDPPTSKTVSLALIFLGLPRERE 102
           P++ ++  AK +  A  +  N    + +  VV  +  ++ PT+K +         PR + 
Sbjct: 46  PQAASEPVAKVIASAAANAQNNNGLDPATLVVATVYADEGPTAKRIR--------PRAQG 97

Query: 103 LLKAHHKRTCHIRYI---HPQRRQERASNNQGRRTMLPSEGTRTSLPKLPSTQLKSSPSP 159
                 KRT HI  +    P + Q  A +++ RR        +    K P+ +  +  +P
Sbjct: 98  RAFRIRKRTSHITVVVESRPAKDQRSAKSSRTRRAEASKAAAKAPAKKAPAKKAPAKKAP 157

Query: 160 AKTKA 164
           AKT A
Sbjct: 158 AKTAA 162


>POGZ_HUMAN (Q7Z3K3) Pogo transposable element with ZNF domain
           (Nbla00003)
          Length = 1410

 Score = 37.7 bits (86), Expect = 0.029
 Identities = 26/113 (23%), Positives = 54/113 (47%), Gaps = 9/113 (7%)

Query: 134 TMLPSEGTRTSLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTLLPSSQVIRT 193
           T++P+ GT+   P +   Q+ S  +P +  ++   R  T T        T++P++  IR+
Sbjct: 186 TLVPAPGTQFVKPTVGVPQVFSQMTPVRPGSTMPVRPTTNTF------TTVIPATLTIRS 239

Query: 194 SKTRSLEKISGNKVATDILSVSTPPRQHPEIRHSSPGERTRTL---CSPCFPT 243
           +  +S  + + +  +T     +T P    ++   SPG+  +T     +P FP+
Sbjct: 240 TVPQSQSQQTKSTPSTSTTPTATQPTSLGQLAVQSPGQSNQTTNPKLAPSFPS 292


>WSC4_YEAST (P38739) Cell wall integrity and stress response
           component 4 precursor
          Length = 605

 Score = 37.0 bits (84), Expect = 0.049
 Identities = 35/121 (28%), Positives = 50/121 (40%), Gaps = 8/121 (6%)

Query: 137 PSEGTRTSLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTLLPSSQVIRTSKT 196
           PS    ++LP   ST+L +S   + T ++S     TTT     +S T+  +S    T+ T
Sbjct: 171 PSTDITSALPTTTSTKLSTSIPTSTTSSTS-----TTTSTSSSTSTTVSVTSSTSTTTST 225

Query: 197 RSLEKISGNKVATDILSVSTPPRQHPEIRHSSPGERTRTLCSPCFPTTTSRQEKVEGKDP 256
            S   IS    +T   S STP         +S    T T  S   PT++S         P
Sbjct: 226 TSSTLIS---TSTSSSSSSTPTTTSSAPISTSTTSSTSTSTSTTSPTSSSAPTSSSNTTP 282

Query: 257 T 257
           T
Sbjct: 283 T 283



 Score = 35.4 bits (80), Expect = 0.14
 Identities = 36/113 (31%), Positives = 42/113 (36%), Gaps = 11/113 (9%)

Query: 134 TMLPSEGTRTSLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTLLPSSQVIRT 193
           T   S  T T+   L ST   SS S   T  SS   S +TT     S+ T  P+S    T
Sbjct: 216 TSSTSTTTSTTSSTLISTSTSSSSSSTPTTTSSAPISTSTTSSTSTSTSTTSPTSSSAPT 275

Query: 194 SKTRSLEKISGNKVATDILSVSTPPRQHPEIRHSSPGERTRTLCSPCFPTTTS 246
           S        S N   T     +T P   P    S+    T T  SP   T TS
Sbjct: 276 S--------SSNTTPTSTTFTTTSPSTAPS---STTVTYTSTTASPITSTITS 317


>PODX_RAT (Q9WTQ2) Podocalyxin precursor
          Length = 485

 Score = 37.0 bits (84), Expect = 0.049
 Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 13/166 (7%)

Query: 83  PTSKTVSLALIFLGLPRERELLKAHHKRTCHIRYIHPQRRQERASNNQGRRTMLPSEGTR 142
           PT    +L L+ L L     L + +  +T         + Q++ + NQ      PS  T 
Sbjct: 3   PTLALSALLLLQLLLLSTPSLSQDNGNKTDTSDITSIDQNQDKPATNQ------PSNATP 56

Query: 143 TSL--PKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTLLPSSQVIRTSKTRSLE 200
            S   P  P++   SSP P  T++S+   S+TTT     + +T   +S V  TS   S +
Sbjct: 57  KSSVQPPTPTSISTSSPDPKATQSSNS--SVTTT-SDSTTDRTSSSTSTVPTTS--NSGQ 111

Query: 201 KISGNKVATDILSVSTPPRQHPEIRHSSPGERTRTLCSPCFPTTTS 246
            +S    ++D ++ + P    P    S P +   +   P  PTT S
Sbjct: 112 TVSSGGKSSDKITTALPTSLGPVNASSQPTDLNTSTKLPSTPTTNS 157



 Score = 31.6 bits (70), Expect = 2.1
 Identities = 30/121 (24%), Positives = 46/121 (37%), Gaps = 11/121 (9%)

Query: 141 TRTSLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTLLPSSQVIRTSKTRSLE 200
           T T LP  P+T   +SP    + +   H ++       QSS   + SS         +  
Sbjct: 145 TSTKLPSTPTTNSTASPHQPVSHSEGQHTTV-------QSSSASVSSSDNTTLLWILTTS 197

Query: 201 KISGNKVATDILSVSTP----PRQHPEIRHSSPGERTRTLCSPCFPTTTSRQEKVEGKDP 256
           K +G    T  +++STP    P   P     SPG       +  F  +TS    V  + P
Sbjct: 198 KPTGTSEGTQPIAISTPGITTPVSTPLQPTGSPGGTESVPTTEEFTHSTSSWTPVVSQGP 257

Query: 257 T 257
           +
Sbjct: 258 S 258


>CIZ1_HUMAN (Q9ULV3) Cip1-interacting zinc finger protein (Nuclear
           protein NP94)
          Length = 898

 Score = 36.6 bits (83), Expect = 0.064
 Identities = 50/226 (22%), Positives = 86/226 (37%), Gaps = 31/226 (13%)

Query: 16  MSLPSYTKPT-TLPRSHAFFARVKKRPLLTVPK------------SGTDEEAKELTKAEP 62
           ++ PS T P    P    FF +  ++ LL  P             SG + + +  T +  
Sbjct: 132 LAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSST 191

Query: 63  SVNNKESSNSVVPGINEEDPPTSKTVSLALIFLGLPRERELLKAHHKRTCHIRYIHPQRR 122
           + N K+SS+  +P  ++ DPP   +   A   +  P +++LL          R   P+  
Sbjct: 192 TPNRKDSSSQTMPVEDKSDPPEG-SEEAAEPRMDTPEDQDLLPCPEDIAKEKRTPAPEPE 250

Query: 123 QERASNNQGRRTMLPSEGTRTSLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSK 182
              AS    +R     E T            K  P   + KA    R    T+ K+  + 
Sbjct: 251 PCEASELPAKRLRSSEEPTE-----------KEPPGQLQVKAQPQAR---MTVPKQTQTP 296

Query: 183 TLLP---SSQVIRTSKTRSLEKISGNKVATDILSVSTPPRQHPEIR 225
            LLP    +QV+   + R L+  +  +  T     ST  +  P+++
Sbjct: 297 DLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQ 342


>EGT2_YEAST (P42835) EGT2 protein precursor (Early G1 transcript 2)
          Length = 1041

 Score = 36.2 bits (82), Expect = 0.083
 Identities = 24/78 (30%), Positives = 38/78 (47%), Gaps = 2/78 (2%)

Query: 134 TMLPSEGTRTSLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSK--TLLPSSQVI 191
           T + S  T TS     ++ L S P  + T  +S    LTTT    Q ++  +L+P S + 
Sbjct: 548 TSISSSITNTSSVSSTTSSLSSGPFVSNTAVASGSYILTTTTESAQLTEIGSLIPISTIT 607

Query: 192 RTSKTRSLEKISGNKVAT 209
            ++ T   +K   NKVA+
Sbjct: 608 TSTTTSGTDKTGSNKVAS 625


>TRPL_CAEEL (P34586) Transient-receptor-potential like protein (TRP
           homologous cation channel protein 1)
          Length = 1027

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 9/87 (10%)

Query: 1   MKCSSRTFSRPCIASMSLPSYTKPTTLPRSHAFFARVKKRPLLTVPKSGTDEEAKELTKA 60
           M+  S T  RP   SM LP  T+P+    S        +    +   S TDEEA E    
Sbjct: 829 MRTMSTTSRRPYGGSMRLPK-TRPSVAEES--------EEDDKSDETSSTDEEADETRSR 879

Query: 61  EPSVNNKESSNSVVPGINEEDPPTSKT 87
           + SV      NS +PGI  E+ P  K+
Sbjct: 880 KSSVLYIPPVNSTLPGIISEEAPVKKS 906


>POGZ_MOUSE (Q8BZH4) Pogo transposable element with ZNF domain
          Length = 1409

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 25/113 (22%), Positives = 53/113 (46%), Gaps = 9/113 (7%)

Query: 134 TMLPSEGTRTSLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTLLPSSQVIRT 193
           T++P+ GT+   P +   Q+ S  +P +  ++   R  T T        T++P++  IR+
Sbjct: 186 TLVPAPGTQFVKPTVGVPQVFSQMTPVRPGSTMPVRPTTNTF------TTVIPATLTIRS 239

Query: 194 SKTRSLEKISGNKVATDILSVSTPPRQHPEIRHSSPGERTRT---LCSPCFPT 243
           +  +S  + + +  +T     +T P    ++    PG+  +T     +P FP+
Sbjct: 240 TVPQSQSQQTKSTPSTSTTPTATQPTSLGQLAGQPPGQSNQTSNPKLAPSFPS 292


>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor
          Length = 725

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 30/109 (27%), Positives = 46/109 (41%), Gaps = 3/109 (2%)

Query: 138 SEGTRTSLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTLLPSSQVIRTSKTR 197
           S  T TSL    ++   +S SP+ T  SS   S +++     SS T   S+    TS + 
Sbjct: 179 SNPTTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSST---STSPSSTSTSS 235

Query: 198 SLEKISGNKVATDILSVSTPPRQHPEIRHSSPGERTRTLCSPCFPTTTS 246
           SL   S +  +T   S ST          S+    + T  SP   +T++
Sbjct: 236 SLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSA 284



 Score = 34.3 bits (77), Expect = 0.32
 Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 9/135 (6%)

Query: 126 ASNNQGRRTMLPSEGTRTSLPKLPSTQLKSSPSPAKTKASS---DHRSLTTTLGKRQSSK 182
           +++     T   S  T  S     S+   +SPS   T ASS      S +T+     SS 
Sbjct: 246 STSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSASSTSTSSYSTSTSPSLTSSSP 305

Query: 183 TLL---PSSQVIRTSKTRSLEKISGNKVATDILSVS--TPPRQHPEIRHSSPGERTRTLC 237
           TL    PSS  I ++ T S   + G+ +A+   SVS  +P      +  +S    T ++ 
Sbjct: 306 TLASTSPSSTSISSTFTDSTSSL-GSSIASSSTSVSLYSPSTPVYSVPSTSSNVATPSMT 364

Query: 238 SPCFPTTTSRQEKVE 252
           S    TT S Q   E
Sbjct: 365 SSTVETTVSSQSSSE 379


>YQU3_CAEEL (Q09550) Hypothetical protein F26C11.3 in chromosome II
          Length = 1240

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 25/95 (26%), Positives = 42/95 (43%), Gaps = 5/95 (5%)

Query: 119 PQRRQERASNNQGRRTMLPSEGTRTSLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKR 178
           P  +    S+ Q  RT      + T++P   ST   S+ SP    +SS     +TT    
Sbjct: 256 PMEQSSTVSSVQKTRTSEDKPSSSTTVPTSASTSESSTSSPMAETSSS-----STTSQSS 310

Query: 179 QSSKTLLPSSQVIRTSKTRSLEKISGNKVATDILS 213
            +S + +P S  + ++ T  L  +S N+ +T   S
Sbjct: 311 PASTSTVPESSTVGSTPTTGLTTLSTNEQSTSTSS 345


>FA5_BOVIN (Q28107) Coagulation factor V precursor (Activated protein
            C cofactor)
          Length = 2211

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 17/156 (10%)

Query: 117  IHPQRRQERASNNQGRRTMLPSEGTRTSLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLG 176
            + P   QE  S + G+ ++ P  G  +  P L  T L   PS           SL+  LG
Sbjct: 1333 LSPDPSQESLSPDLGQTSLSPDLGQESLSPDLGQTALSPDPSQESLSPDLGQTSLSPDLG 1392

Query: 177  KRQ--------------SSKTLLPSSQVIRTSKTRSLEKISGNKVATDILSVSTPPRQHP 222
            +                S ++L P       S   SLE +S +    D L  ++PP    
Sbjct: 1393 QESLSPDLGQTALSPDLSQESLSPDLGQTPLSPDLSLESLSPDLSQLD-LKQTSPPLDLN 1451

Query: 223  EIRHSSPGERTRTLCSPCFPTTTSRQEKVEGKDPTP 258
            +  H+S  E +++L  P F  T    +  +   P P
Sbjct: 1452 QTSHTS--ESSQSLPLPEFGQTFPNADIGQMPSPPP 1485


>RRPP_PI1HD (P32531) RNA polymerase alpha subunit (EC 2.7.7.48)
           (Nucleocapsid phosphoprotein)
          Length = 568

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 39/173 (22%), Positives = 68/173 (38%), Gaps = 25/173 (14%)

Query: 100 ERELLKAHHKRTCHIRYIHPQRRQERASNNQGRRTM------LPSEGTRTSLPKLPSTQL 153
           E  +L+ + +R   I+    Q R ER  N++  ++       L    T+TS   LPS   
Sbjct: 220 EDAVLQRNKRRPTTIK--RSQTRSERTQNSELHKSTSEDSSNLEDHNTKTSPKVLPS--- 274

Query: 154 KSSPSPAKTKASSDHRSLTTTLGKRQSSKTLLPSSQVIRTSKTRSLEKISGNKVATDILS 213
           K+  S A  K + +HR    T     ++   LP+ +   T+        S +++A  ++S
Sbjct: 275 KNEESVATQKNNHNHRKTKYTTNNANNNTKSLPTPEHDTTANEEGTSNTSVDEMAKLLVS 334

Query: 214 VSTPPRQHP--------------EIRHSSPGERTRTLCSPCFPTTTSRQEKVE 252
           +     QH                ++ ++  E T  LC        S + KVE
Sbjct: 335 LGVIKSQHEFELSRSASHVFAKRMLKSANYKEMTFNLCGMLLSVEKSLENKVE 387


>AMYH_YEAST (P08640) Glucoamylase S1/S2 precursor (EC 3.2.1.3)
           (Glucan 1,4-alpha-glucosidase) (1,4-alpha-D-glucan
           glucohydrolase)
          Length = 1367

 Score = 34.7 bits (78), Expect = 0.24
 Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 1/113 (0%)

Query: 146 PKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTLLPSSQVIRTSKTRSLEKISGN 205
           P   +T+  S+P+P  + ++++  S   T    +SS   +P+     T+++ S    + +
Sbjct: 599 PSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSS-STTESSSAPVPTPS 657

Query: 206 KVATDILSVSTPPRQHPEIRHSSPGERTRTLCSPCFPTTTSRQEKVEGKDPTP 258
              T+  S   P         SS    + T  S   P T+S  E      PTP
Sbjct: 658 SSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTP 710



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 38/141 (26%), Positives = 56/141 (38%), Gaps = 16/141 (11%)

Query: 134 TMLPSEGTRTSLPKLPSTQLKSSPSPAKTKASSDHRS----LTTTLGKRQSSKTLLPSSQ 189
           T   +E +   +P   S+  +SS +PA T +SS   S    +T++  +  S+    PSS 
Sbjct: 501 TSSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSS 560

Query: 190 VIRTSK---TRSLEKISGNKVATDILS--------VSTPPRQHPEIRHS-SPGERTRTLC 237
              +S    T S  + S   V T   S        V TP     E   + +P   + T  
Sbjct: 561 TTESSSTPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTE 620

Query: 238 SPCFPTTTSRQEKVEGKDPTP 258
           S   P T+S  E      PTP
Sbjct: 621 SSSAPVTSSTTESSSAPVPTP 641



 Score = 30.4 bits (67), Expect = 4.6
 Identities = 27/114 (23%), Positives = 44/114 (37%), Gaps = 5/114 (4%)

Query: 150 STQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTLLPSSQVIRTSK-----TRSLEKISG 204
           +T+  S+P P  + ++++  S   T    +SS   + SS    +S      + S  + S 
Sbjct: 348 TTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSS 407

Query: 205 NKVATDILSVSTPPRQHPEIRHSSPGERTRTLCSPCFPTTTSRQEKVEGKDPTP 258
             V +     S+ P        SS    + T  S   P T+S  E      PTP
Sbjct: 408 APVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTP 461



 Score = 29.6 bits (65), Expect = 7.8
 Identities = 30/126 (23%), Positives = 50/126 (38%), Gaps = 19/126 (15%)

Query: 139  EGTRTSLPKLPSTQLKSSPSPAKTKASSDHRS--------LTTTLGKRQSSKTLLPSSQV 190
            E T    PK  +T +  S SP++T + S   S        ++TT+   + S +  P  ++
Sbjct: 997  ETTSGCSPKTITTTVPCSTSPSETASESTTTSPTTPVTTVVSTTVVTTEYSTSTKPGGEI 1056

Query: 191  IRTSKTRSLEKISGNKVATDILSVSTPPRQHPEIRHSSPGERTRTLCSPCFPTTTSRQEK 250
              T  T++        + T  L+   P      + + +P   T T+CS     T S  E 
Sbjct: 1057 TTTFVTKN--------IPTTYLTTIAPTPSVTTVTNFTPTTITTTVCS---TGTNSAGET 1105

Query: 251  VEGKDP 256
              G  P
Sbjct: 1106 TSGCSP 1111


>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9 in chromosome II
          Length = 3178

 Score = 34.3 bits (77), Expect = 0.32
 Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 10/136 (7%)

Query: 121 RRQERASNNQGRRTMLPSEGTRTSLPK---LPSTQLKSSPSPAKTKA-------SSDHRS 170
           RR +R + +      + S  T T+ P    + ST   ++  P  T         S+   S
Sbjct: 256 RRMKRDAGDNTCDYTIESTSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPS 315

Query: 171 LTTTLGKRQSSKTLLPSSQVIRTSKTRSLEKISGNKVATDILSVSTPPRQHPEIRHSSPG 230
            +TT+    ++ T   S+    TS T+       +  ++  LS S P    PEI  +   
Sbjct: 316 TSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPEITSTLSS 375

Query: 231 ERTRTLCSPCFPTTTS 246
                +CS    TTTS
Sbjct: 376 LPDNAICSYLDETTTS 391



 Score = 30.4 bits (67), Expect = 4.6
 Identities = 48/236 (20%), Positives = 81/236 (33%), Gaps = 15/236 (6%)

Query: 22  TKPTTLPRSHAFFARVKKRPLLTVPKSGTDEEAKELTKAEPSVNNKESSNSVVPGINEED 81
           T  TT+P S +           T   S T E       +  S +   +S +         
Sbjct: 291 TSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITS 350

Query: 82  PPTSKTVSLALIFLGLPRERELLKAHHKRTCHIRYIHPQRRQERASNNQGRRTMLPSEGT 141
            P+S T+S ++     P     L +         Y+      E  ++     TML S  T
Sbjct: 351 SPSSTTLSTSIPTTTTPEITSTLSSLPDNAI-CSYL-----DETTTSTTFTTTMLTSTTT 404

Query: 142 RTSLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTLLPSSQVIRTSKTRSLEK 201
                   +T++ S+ S   T   +     TT      S+ T  PS+  + TS + S   
Sbjct: 405 EEPSTSTTTTEVTSTSSTVTTTEPT-----TTLTTSTASTSTTEPSTSTVTTSPSTSPVT 459

Query: 202 ISGNKVATDILSVSTPPRQHPEIRHSSPGERTRTLCSPCFPTTTSRQEKVEGKDPT 257
            +    ++   +V+TP     E   +SP     T  S   P+T++         P+
Sbjct: 460 STVTSSSSSSTTVTTP--TSTESTSTSPSSTVTT--STTAPSTSTTGPSSSSSTPS 511


>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I
          Length = 1794

 Score = 34.3 bits (77), Expect = 0.32
 Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 21/125 (16%)

Query: 126  ASNNQGRRTMLPSEGTRTSLPKLPSTQLK----SSPSPAKTKASSDHRSLTTTLGKRQSS 181
            +SN + R   + +E  R    +L +  +K     +PSPA   +++             S+
Sbjct: 1223 SSNLEDRAARIKAEAQRRMNERLAALGIKPRQKGTPSPAPVNSAT-------------ST 1269

Query: 182  KTLLPSSQVIRTSKTRSLEKISGNKVATDILSVSTPPRQHPEIRHSSPGERTRTLCSPCF 241
                P++Q I+  K  S   +S N  A    S+STPP   P ++H  P ++  T  +   
Sbjct: 1270 PVAAPTAQQIQPGKQASA--VSSNVPAVSA-SISTPPAVVPTVQHPQPTKQIPT-AAVKD 1325

Query: 242  PTTTS 246
            P+TTS
Sbjct: 1326 PSTTS 1330


>MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC LH)
           [Contains: Micronuclear linker histone-alpha;
           Micronuclear linker histone-beta; Micronuclear linker
           histone-delta; Micronuclear linker histone-gamma]
          Length = 633

 Score = 34.3 bits (77), Expect = 0.32
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 121 RRQERASNNQGRRTMLPSEGTRTSLPKLPSTQ-LKSSPSPAKTKASSDHRSLTTTLGKRQ 179
           R Q  +SN +   +    +GTR+S  K  +++  K+S S  +  +SS  RS ++   K  
Sbjct: 218 RSQSSSSNRRKASSSKDQKGTRSSSRKASNSKGRKNSTSNKRNSSSSSKRSSSSKNKKSS 277

Query: 180 SSKTLLPSSQVIRTSKTRSLEKISGNK 206
           SSK    SS   R S +    K S +K
Sbjct: 278 SSKNKKSSSSKGRKSSSSRGRKASSSK 304


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.310    0.125    0.354 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,837,091
Number of Sequences: 164201
Number of extensions: 1260482
Number of successful extensions: 3668
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 3554
Number of HSP's gapped (non-prelim): 187
length of query: 263
length of database: 59,974,054
effective HSP length: 108
effective length of query: 155
effective length of database: 42,240,346
effective search space: 6547253630
effective search space used: 6547253630
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)