BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0011a.2
         (391 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

METX_XYLFT (Q87BG9) Homoserine O-acetyltransferase (EC 2.3.1.31)...    32  3.6
METX_XYLFA (Q9PAN0) Homoserine O-acetyltransferase (EC 2.3.1.31)...    32  3.6
DLP3_RAT (P97838) Disks large-associated protein 3 (DAP-3) (SAP9...    31  4.7

>METX_XYLFT (Q87BG9) Homoserine O-acetyltransferase (EC 2.3.1.31)
           (Homoserine O-trans-acetylase) (Homoserine
           transacetylase) (HTA)
          Length = 370

 Score = 31.6 bits (70), Expect = 3.6
 Identities = 28/95 (29%), Positives = 43/95 (44%), Gaps = 11/95 (11%)

Query: 8   RSHIERNREEGHVRLWNDYFSTNPVYTEEQFQRRYRMRKHMFLRIVEA-----ISNTDDY 62
           RS +E +   G VRL +D  +  P   E Q +       H F+   +      +S + D+
Sbjct: 226 RSALEWDGRFGRVRLDSDQTNDTPFGLEFQIENYLESHAHRFVHTFDPNCYLYLSRSMDW 285

Query: 63  FQMRNDATGRM--GLSPLQKQTAAIRMLAYGSSTD 95
           F +   A G +  GL+ ++ Q    R LA GS TD
Sbjct: 286 FDVAEYANGDIIAGLARIRIQ----RALAIGSHTD 316


>METX_XYLFA (Q9PAN0) Homoserine O-acetyltransferase (EC 2.3.1.31)
           (Homoserine O-trans-acetylase) (Homoserine
           transacetylase) (HTA)
          Length = 370

 Score = 31.6 bits (70), Expect = 3.6
 Identities = 28/95 (29%), Positives = 43/95 (44%), Gaps = 11/95 (11%)

Query: 8   RSHIERNREEGHVRLWNDYFSTNPVYTEEQFQRRYRMRKHMFLRIVEA-----ISNTDDY 62
           RS +E +   G VRL +D  +  P   E Q +       H F+   +      +S + D+
Sbjct: 226 RSALEWDGRFGRVRLDSDQTNDTPFGLEFQIENYLESHAHRFVHTFDPNCYLYLSRSMDW 285

Query: 63  FQMRNDATGRM--GLSPLQKQTAAIRMLAYGSSTD 95
           F +   A G +  GL+ ++ Q    R LA GS TD
Sbjct: 286 FDVAEYANGDILAGLARIRIQ----RALAIGSHTD 316


>DLP3_RAT (P97838) Disks large-associated protein 3 (DAP-3)
           (SAP90/PSD-95-associated protein 3) (SAPAP3)
           (PSD-95/SAP90 binding protein 3)
          Length = 977

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 25/84 (29%), Positives = 33/84 (38%), Gaps = 14/84 (16%)

Query: 42  YRMRKHMFLRIVEAISNTDD----YFQMRNDATGRMGLS----------PLQKQTAAIRM 87
           +RMR H +LR ++A  + DD            +GR G S          P   Q      
Sbjct: 494 FRMRSHSYLRAIQAGCSQDDDCLPLLAAPASVSGRPGSSFNFRKAPPPIPPGSQAPPRIS 553

Query: 88  LAYGSSTDSVDEYVCIGESTARKC 111
           +   SSTDS  E     E  AR+C
Sbjct: 554 ITAQSSTDSAHESFTAAEGPARRC 577


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.323    0.138    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,894,265
Number of Sequences: 164201
Number of extensions: 2110917
Number of successful extensions: 4379
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4378
Number of HSP's gapped (non-prelim): 3
length of query: 391
length of database: 59,974,054
effective HSP length: 112
effective length of query: 279
effective length of database: 41,583,542
effective search space: 11601808218
effective search space used: 11601808218
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 67 (30.4 bits)