BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0008.6
(262 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PG20_MYCTU (O53416) Hypothetical PE-PGRS family protein PE_PGRS20 43 9e-04
UTH1_YEAST (P36135) UTH1 protein 40 0.007
HM1D_DROAN (P22544) Homeobox protein B-H1 40 0.007
COAA_BPPF1 (P25129) Probable coat protein A precursor 40 0.007
PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS5... 39 0.010
RALY_HUMAN (Q9UKM9) RNA-binding protein Raly (hnRNP associated w... 39 0.013
MAM_DROME (P21519) Neurogenic protein mastermind 38 0.028
THYD_CLAFS (Q9UVI4) Trihydrophobin precursor (CFTH1) 37 0.037
SR68_HUMAN (Q9UHB9) Signal recognition particle 68 kDa protein (... 37 0.037
HYR1_CANAL (P46591) Hyphally regulated protein precursor 37 0.037
ZIC2_HUMAN (O95409) Zinc finger protein ZIC 2 (Zinc finger prote... 37 0.048
RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 h... 37 0.063
RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 h... 37 0.063
RFX1_HUMAN (P22670) MHC class II regulatory factor RFX1 (RFX) (E... 37 0.063
SR68_CANFA (Q00004) Signal recognition particle 68 kDa protein (... 36 0.083
GRP1_PETHY (P09789) Glycine-rich cell wall structural protein 1 ... 36 0.083
GRA6_TOXGO (Q27003) Dense granule protein 6 (Protein GRA 6) (Ant... 36 0.083
PUR_HUMAN (Q00577) Transcriptional activator protein PUR-alpha (... 36 0.11
HXB3_MOUSE (P09026) Homeobox protein Hox-B3 (Hox-2.7) (MH-23) 36 0.11
CAN_CAEEL (P34308) Calpain clp-1 (EC 3.4.22.-) 36 0.11
>PG20_MYCTU (O53416) Hypothetical PE-PGRS family protein PE_PGRS20
Length = 463
Score = 42.7 bits (99), Expect = 9e-04
Identities = 18/34 (52%), Positives = 22/34 (63%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDS 229
GG GDGGN G G+G G KG+GG+ D G D+
Sbjct: 385 GGTGGDGGNGGLGAGSGAKGNGGNGGDGGKGGDA 418
Score = 33.1 bits (74), Expect = 0.70
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GG +G GG G G+ D G+GG D+ N + G
Sbjct: 287 GGTAGAGGQGGNGNSGIDPGNGGQGADTGNAGNGG 321
Score = 32.7 bits (73), Expect = 0.91
Identities = 14/39 (35%), Positives = 19/39 (47%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGALIRL 235
G G GGN G G+ G G D ++ NG G+ +L
Sbjct: 291 GAGGQGGNGNSGIDPGNGGQGADTGNAGNGGHGGSAAKL 329
Score = 31.6 bits (70), Expect = 2.0
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 10/45 (22%)
Query: 196 GGDSGDGGN---------NGG-GSGHGDKGDGGDEDDSDNGSDSG 230
GG++G+GGN NGG G G G G GG + ++G D G
Sbjct: 262 GGNAGNGGNGGSAGWLSGNGGTGGGGGTAGAGGQGGNGNSGIDPG 306
Score = 31.2 bits (69), Expect = 2.7
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 196 GGDSGDGGN----NGGGSGHGDKGDGGDEDDSDNGSDSGAL 232
GG GDGG+ +G G G G GG+ + NG +G L
Sbjct: 237 GGRGGDGGSAGWLSGNGGDAGTGGGGGNAGNGGNGGSAGWL 277
Score = 30.8 bits (68), Expect = 3.5
Identities = 15/37 (40%), Positives = 19/37 (50%), Gaps = 1/37 (2%)
Query: 195 VGGDSGDGGNNGGGSGHGDKGDGGDED-DSDNGSDSG 230
+ G+ GD G GGG G+ G+GG S NG G
Sbjct: 249 LSGNGGDAGTGGGGGNAGNGGNGGSAGWLSGNGGTGG 285
Score = 30.4 bits (67), Expect = 4.5
Identities = 16/35 (45%), Positives = 18/35 (50%), Gaps = 1/35 (2%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDED-DSDNGSDSG 230
G+ G GG G G G GDGG S NG D+G
Sbjct: 223 GNGGAGGAGGAGGAGGRGGDGGSAGWLSGNGGDAG 257
Score = 30.0 bits (66), Expect = 5.9
Identities = 16/36 (44%), Positives = 18/36 (49%), Gaps = 3/36 (8%)
Query: 195 VGGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
+G SG GN G G GD G GGD NG + G
Sbjct: 396 LGAGSGAKGNGGNG---GDGGKGGDAQLIGNGGNGG 428
Score = 29.6 bits (65), Expect = 7.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GG G GG G G G+ G D + G+D+G
Sbjct: 281 GGTGGGGGTAGAGGQGGNGNSGIDPGNGGQGADTG 315
>UTH1_YEAST (P36135) UTH1 protein
Length = 450
Score = 39.7 bits (91), Expect = 0.007
Identities = 43/177 (24%), Positives = 65/177 (36%), Gaps = 21/177 (11%)
Query: 58 LFIHTKCKHHTYNEIQAQVANGEKIGICLPLLETKVVDGNLFVGASKNLKRTPKVHYHPI 117
LFIH+ YN++ N + + + L + AS + P VH H
Sbjct: 54 LFIHSFL--FEYNQLLVLPLNKNLPSLNFSRNSSMKLSALLALSASTAVLAAPAVH-HSD 110
Query: 118 GHHHHRPPPPVTITINTTFIAASTAIVVVATTNLRRFLFHGLGVVTEATAVVTNMMLTVV 177
HHH+ VT+T ++ A A+V+ A T T +A + +V
Sbjct: 111 NHHHNDKRAVVTVT---QYVNADGAVVIPAAT-------------TATSAAADGKVESVA 154
Query: 178 AATKVMTKVVVAPTMVVVGGDSGDGGNNGGGSGHGDKGD--GGDEDDSDNGSDSGAL 232
AAT ++ A T S ++ S GD G SD S GA+
Sbjct: 155 AATTTLSSTAAAATTSAAASSSSSSSSSSSSSSSVGSGDFEDGTISCSDFPSGQGAV 211
>HM1D_DROAN (P22544) Homeobox protein B-H1
Length = 606
Score = 39.7 bits (91), Expect = 0.007
Identities = 29/116 (25%), Positives = 39/116 (33%), Gaps = 13/116 (11%)
Query: 110 PKVHYHPIGHHHHRPPPPVTITINTTFIAASTAIVVVATTNLRRFLFHGLGVVTEATAVV 169
P+ H HP H H P P + + A A +GL V A A+
Sbjct: 170 PQSHPHPHPHPHSHPHPHALVHPHAKLAAGGGAA-------------NGLNVAQYAAAMQ 216
Query: 170 TNMMLTVVAATKVMTKVVVAPTMVVVGGDSGDGGNNGGGSGHGDKGDGGDEDDSDN 225
+ AA + A + GG GGG G G G + DDS +
Sbjct: 217 QHYAAAAAAAAARNSAAAAAAAAAAAASAAAAGGGGGGGLGVGGAPAGAELDDSSD 272
Score = 30.4 bits (67), Expect = 4.5
Identities = 17/71 (23%), Positives = 27/71 (37%), Gaps = 13/71 (18%)
Query: 110 PKVHYHPIGHHHHR-------------PPPPVTITINTTFIAASTAIVVVATTNLRRFLF 156
P +H+HP+ HH+ P PP T ++ ST N RF+
Sbjct: 32 PALHHHPVLQHHYSLQQQHQQQQQQQPPAPPAVATTTVVNMSGSTTTAANLKPNRSRFMI 91
Query: 157 HGLGVVTEATA 167
+ + + A A
Sbjct: 92 NDILAGSAAAA 102
>COAA_BPPF1 (P25129) Probable coat protein A precursor
Length = 437
Score = 39.7 bits (91), Expect = 0.007
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GG + +GG N GG+G+GD GGD + + +GS G
Sbjct: 275 GGGNNNGGGNDGGTGNGDGSGGGDGNGAGDGSGDG 309
Score = 34.3 bits (77), Expect = 0.31
Identities = 18/44 (40%), Positives = 22/44 (49%), Gaps = 2/44 (4%)
Query: 190 PTMVVVGGDSGDGGNNGGGSGHGDKGDG--GDEDDSDNGSDSGA 231
PT G G G NGGG+ +G DG G+ D S G +GA
Sbjct: 259 PTDPTTPGGDGGGDGNGGGNNNGGGNDGGTGNGDGSGGGDGNGA 302
Score = 33.9 bits (76), Expect = 0.41
Identities = 17/40 (42%), Positives = 22/40 (54%), Gaps = 5/40 (12%)
Query: 196 GGDSGDGGNNGG-----GSGHGDKGDGGDEDDSDNGSDSG 230
GG++ GGN+GG GSG GD GD +GS +G
Sbjct: 276 GGNNNGGGNDGGTGNGDGSGGGDGNGAGDGSGDGDGSGTG 315
Score = 33.1 bits (74), Expect = 0.70
Identities = 14/32 (43%), Positives = 18/32 (55%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSD 228
G +G+G +GGG G+G GD D S G D
Sbjct: 286 GGTGNGDGSGGGDGNGAGDGSGDGDGSGTGGD 317
Score = 30.4 bits (67), Expect = 4.5
Identities = 15/32 (46%), Positives = 16/32 (49%), Gaps = 1/32 (3%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGS 227
G SG G NG G G GD GDG NG+
Sbjct: 291 GDGSGGGDGNGAGDGSGD-GDGSGTGGDGNGT 321
>PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS54
precursor
Length = 1901
Score = 39.3 bits (90), Expect = 0.010
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD+G GGN G +G G+ G+GG D NG D G
Sbjct: 1830 GGDAGAGGNGGSATGVGNGGNGG---DGGNGGDGG 1861
Score = 35.8 bits (81), Expect = 0.11
Identities = 19/44 (43%), Positives = 22/44 (49%), Gaps = 8/44 (18%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGD--------EDDSDNGSDSGA 231
GG +G GG NG G G+ GDGGD D+ G D GA
Sbjct: 1029 GGSAGAGGINGAGGAGGNGGDGGDGATGAAGLGDNGGVGGDGGA 1072
Score = 35.8 bits (81), Expect = 0.11
Identities = 19/44 (43%), Positives = 22/44 (49%), Gaps = 8/44 (18%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGD--------EDDSDNGSDSGA 231
GG +G GG NG G G+ GDGGD D+ G D GA
Sbjct: 828 GGSAGAGGINGAGGAGGNGGDGGDGATGAAGLGDNGGVGGDGGA 871
Score = 35.0 bits (79), Expect = 0.18
Identities = 15/36 (41%), Positives = 21/36 (57%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GG+ G GG G +G G +G GGD D+ G + G+
Sbjct: 1806 GGNGGAGGAGGTPTGSGTEGTGGDGGDAGAGGNGGS 1841
Score = 34.7 bits (78), Expect = 0.24
Identities = 15/35 (42%), Positives = 17/35 (47%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD GD G+ GGG G G G + G D G
Sbjct: 971 GGDGGDAGSGGGGGFGGAAGKAGGGGNGGRGGDGG 1005
Score = 34.3 bits (77), Expect = 0.31
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 195 VGGDSGDGGNNGGGSGHGDKGDGGDEDDSDNG--SDSGA 231
VGG++G GG NG G G G GGD + G S+ GA
Sbjct: 1649 VGGNAGAGGINGAGGTGGTGGAGGDGQNGTTGVASEGGA 1687
Score = 34.3 bits (77), Expect = 0.31
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 195 VGGDSGDGGNNGGGSGHGDKGDGGDEDDSDNG--SDSGA 231
VGG++G GG NG G G G GGD + G S+ GA
Sbjct: 1444 VGGNAGAGGINGAGGTGGTGGAGGDGQNGTTGVASEGGA 1482
Score = 34.3 bits (77), Expect = 0.31
Identities = 20/42 (47%), Positives = 22/42 (51%), Gaps = 5/42 (11%)
Query: 195 VGGDSGDGG--NNGGGSGHG---DKGDGGDEDDSDNGSDSGA 231
VGGD G GG NGG +G G GDGG + NG GA
Sbjct: 865 VGGDGGAGGAAGNGGNAGVGLTAKAGDGGAAGNGGNGGAGGA 906
Score = 34.3 bits (77), Expect = 0.31
Identities = 20/42 (47%), Positives = 22/42 (51%), Gaps = 5/42 (11%)
Query: 195 VGGDSGDGG--NNGGGSGHG---DKGDGGDEDDSDNGSDSGA 231
VGGD G GG NGG +G G GDGG + NG GA
Sbjct: 1066 VGGDGGAGGAAGNGGNAGVGLTAKAGDGGAAGNGGNGGAGGA 1107
Score = 34.3 bits (77), Expect = 0.31
Identities = 19/44 (43%), Positives = 22/44 (49%), Gaps = 9/44 (20%)
Query: 196 GGDSGDGGNN-----GGGSGHGDKG----DGGDEDDSDNGSDSG 230
GG+ GDGGN GGG+G G G GG + D NG G
Sbjct: 1854 GGNGGDGGNGAPGGFGGGAGAGGLGGSGAGGGTDGDDGNGGSPG 1897
Score = 33.5 bits (75), Expect = 0.54
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDS 229
GG+SG GG NG G G G GG +G+D+
Sbjct: 717 GGNSGVGGTNGSGGAGGAGGKGGTGGAGGSGADN 750
Score = 33.5 bits (75), Expect = 0.54
Identities = 15/35 (42%), Positives = 17/35 (47%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD GD G+ GGG G G G + G D G
Sbjct: 1172 GGDGGDAGSGGGGGFGGAAGKAGGGGNGGVGGDGG 1206
Score = 33.5 bits (75), Expect = 0.54
Identities = 16/36 (44%), Positives = 18/36 (49%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GG+ G GG GGG G G+GG NG GA
Sbjct: 1779 GGNGGAGGLGGGGGTGGTNGNGGLGGGGGNGGAGGA 1814
Score = 33.5 bits (75), Expect = 0.54
Identities = 18/46 (39%), Positives = 23/46 (49%), Gaps = 7/46 (15%)
Query: 189 APTMVVVGGDSGDGGNNG-------GGSGHGDKGDGGDEDDSDNGS 227
AP ++ G D GDGG G G G G GDGGD ++ G+
Sbjct: 1255 APATLIGGPDGGDGGQGGIGGDGGNAGFGAGVPGDGGDGGNAGFGA 1300
Score = 33.1 bits (74), Expect = 0.70
Identities = 14/36 (38%), Positives = 18/36 (49%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GGD+G GG G G G G GG+ +G D +
Sbjct: 974 GGDAGSGGGGGFGGAAGKAGGGGNGGRGGDGGDGAS 1009
Score = 32.7 bits (73), Expect = 0.91
Identities = 15/34 (44%), Positives = 17/34 (49%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDS 229
GG SG GG NG G G G GG G+D+
Sbjct: 599 GGSSGAGGTNGSGGAGGTGGQGGAGGAGGAGADN 632
Score = 32.7 bits (73), Expect = 0.91
Identities = 22/50 (44%), Positives = 24/50 (48%), Gaps = 13/50 (26%)
Query: 195 VGGDSGDGGNNGGGSG-HGDKGDGG------------DEDDSDNGSDSGA 231
V GD GDGGN G G+G GD G GG D D S +G GA
Sbjct: 1286 VPGDGGDGGNAGFGAGVPGDGGIGGTGGAGGAGGAGADGDPSIDGGQGGA 1335
Score = 32.3 bits (72), Expect = 1.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 199 SGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
+GDGG G G G G GG D++ NG GA
Sbjct: 889 AGDGGAAGNGGNGGAGGAGGAGDNNFNGGQGGA 921
Score = 32.3 bits (72), Expect = 1.2
Identities = 15/35 (42%), Positives = 16/35 (44%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GG GDGG+ G G G G G G NG G
Sbjct: 968 GGTGGDGGDAGSGGGGGFGGAAGKAGGGGNGGRGG 1002
Score = 32.3 bits (72), Expect = 1.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 199 SGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
+GDGG G G G G GG D++ NG GA
Sbjct: 1090 AGDGGAAGNGGNGGAGGAGGAGDNNFNGGQGGA 1122
Score = 32.0 bits (71), Expect = 1.6
Identities = 15/35 (42%), Positives = 16/35 (44%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GG GDGG+ G G G G G G NG G
Sbjct: 1169 GGTGGDGGDAGSGGGGGFGGAAGKAGGGGNGGVGG 1203
Score = 32.0 bits (71), Expect = 1.6
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
Query: 199 SGDGGNNGGGSGHGDKGD-----GGDEDDSDNGSDSG 230
SGDGGN G G G+ GD GG G D+G
Sbjct: 1562 SGDGGNGGAGGAGGNGGDGDGFIGGSGGTGGTGGDAG 1598
Score = 32.0 bits (71), Expect = 1.6
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
Query: 199 SGDGGNNGGGSGHGDKGD-----GGDEDDSDNGSDSG 230
SGDGGN G G G+ GD GG G D+G
Sbjct: 1357 SGDGGNGGAGGAGGNGGDGDGFIGGSGGTGGTGGDAG 1393
Score = 31.6 bits (70), Expect = 2.0
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Query: 196 GGDSGDGGNNG-GGSGHGDK----GDGGDEDDSDNGSDSG 230
GG+ GDGG+ G +G GD GDGG + NG ++G
Sbjct: 843 GGNGGDGGDGATGAAGLGDNGGVGGDGGAGGAAGNGGNAG 882
Score = 31.6 bits (70), Expect = 2.0
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Query: 196 GGDSGDGGNNG-GGSGHGDK----GDGGDEDDSDNGSDSG 230
GG+ GDGG+ G +G GD GDGG + NG ++G
Sbjct: 1044 GGNGGDGGDGATGAAGLGDNGGVGGDGGAGGAAGNGGNAG 1083
Score = 31.6 bits (70), Expect = 2.0
Identities = 16/35 (45%), Positives = 17/35 (47%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
G GDGG G G G G G D D S +G GA
Sbjct: 1711 GVPGDGGIGGTGGAGGAGGAGADGDPSIDGGQGGA 1745
Score = 31.6 bits (70), Expect = 2.0
Identities = 16/35 (45%), Positives = 17/35 (47%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
G GDGG G G G G G D D S +G GA
Sbjct: 1506 GVPGDGGIGGTGGAGGAGGAGADGDPSIDGGQGGA 1540
Score = 31.2 bits (69), Expect = 2.7
Identities = 14/36 (38%), Positives = 18/36 (49%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GG+ G GGN+G G +G G GG G G+
Sbjct: 711 GGEGGAGGNSGVGGTNGSGGAGGAGGKGGTGGAGGS 746
Score = 31.2 bits (69), Expect = 2.7
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 194 VVGGDSGDGG--NNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
+ GG +G GG GG G G G G ++ S G+D GA
Sbjct: 430 IAGGINGSGGAGGTGGQGGAGGMGGSGADNASGIGADGGA 469
Score = 31.2 bits (69), Expect = 2.7
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 10/45 (22%)
Query: 196 GGDSGDGGNNG---------GGSGHGDKGDGGDEDDSDNGSDSGA 231
GG+ G GG G GGSG G GDGGD G GA
Sbjct: 1146 GGNGGTGGKGGAGGAGTLGVGGSG-GTGGDGGDAGSGGGGGFGGA 1189
Score = 31.2 bits (69), Expect = 2.7
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 196 GGDSGDGG-----NNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GG GDGG NGG +G G GD + NG + GA
Sbjct: 1064 GGVGGDGGAGGAAGNGGNAGVGLTAKAGDGGAAGNGGNGGA 1104
Score = 31.2 bits (69), Expect = 2.7
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 10/45 (22%)
Query: 196 GGDSGDGGNNG---------GGSGHGDKGDGGDEDDSDNGSDSGA 231
GG+ G GG G GGSG G GDGGD G GA
Sbjct: 945 GGNGGTGGKGGAGGAGTLGVGGSG-GTGGDGGDAGSGGGGGFGGA 988
Score = 31.2 bits (69), Expect = 2.7
Identities = 13/36 (36%), Positives = 18/36 (49%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GGD+G GG G G G G GG+ +G + +
Sbjct: 1175 GGDAGSGGGGGFGGAAGKAGGGGNGGVGGDGGEGAS 1210
Score = 31.2 bits (69), Expect = 2.7
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 196 GGDSGDGG-----NNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GG GDGG NGG +G G GD + NG + GA
Sbjct: 863 GGVGGDGGAGGAAGNGGNAGVGLTAKAGDGGAAGNGGNGGA 903
Score = 30.8 bits (68), Expect = 3.5
Identities = 14/32 (43%), Positives = 16/32 (49%)
Query: 199 SGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
SGDGGN G G G+ G GG G +G
Sbjct: 1767 SGDGGNGGAGGAGGNGGAGGLGGGGGTGGTNG 1798
Score = 30.8 bits (68), Expect = 3.5
Identities = 14/36 (38%), Positives = 19/36 (51%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GG G GG+ G G +G G GG+ D +G+ A
Sbjct: 1023 GGQGGAGGSAGAGGINGAGGAGGNGGDGGDGATGAA 1058
Score = 30.8 bits (68), Expect = 3.5
Identities = 14/36 (38%), Positives = 17/36 (46%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GG G GG++G G +G G GG G GA
Sbjct: 593 GGAGGQGGSSGAGGTNGSGGAGGTGGQGGAGGAGGA 628
Score = 30.8 bits (68), Expect = 3.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 195 VGGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGS 227
VGG +G GG G G G G GG D+ G+
Sbjct: 722 VGGTNGSGGAGGAGGKGGTGGAGGSGADNPTGA 754
Score = 30.8 bits (68), Expect = 3.5
Identities = 14/36 (38%), Positives = 19/36 (51%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GG G GG+ G G +G G GG+ D +G+ A
Sbjct: 822 GGQGGAGGSAGAGGINGAGGAGGNGGDGGDGATGAA 857
Score = 30.4 bits (67), Expect = 4.5
Identities = 14/34 (41%), Positives = 15/34 (43%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDS 229
GG G GG G G GDGGD NG +
Sbjct: 1809 GGAGGAGGTPTGSGTEGTGGDGGDAGAGGNGGSA 1842
Score = 30.4 bits (67), Expect = 4.5
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 196 GGDSGDGGNNGGGSGHGDKG-DGGDEDDSDNGSDSGA 231
GG GDGG+ G G G G DGG G +GA
Sbjct: 797 GGRGGDGGDGASGLGLGLSGFDGGQGGQGGAGGSAGA 833
Score = 30.4 bits (67), Expect = 4.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGD 219
GG +G GG NG G G G GGD
Sbjct: 1230 GGSAGAGGINGAGGAGGTGGAGGD 1253
Score = 30.4 bits (67), Expect = 4.5
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 196 GGDSGDGGNNGGGSGHGDKG-DGGDEDDSDNGSDSGA 231
GG GDGG+ G G G G DGG G +GA
Sbjct: 998 GGRGGDGGDGASGLGLGLSGFDGGQGGQGGAGGSAGA 1034
Score = 29.6 bits (65), Expect = 7.7
Identities = 14/32 (43%), Positives = 16/32 (49%)
Query: 195 VGGDSGDGGNNGGGSGHGDKGDGGDEDDSDNG 226
VGG +G GG G G G G GG D+ G
Sbjct: 548 VGGTNGSGGQGGTGGAGGAGGAGGVGADNPTG 579
Score = 29.6 bits (65), Expect = 7.7
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 196 GGDSGDGGNNGGGSGHGDKG-DGGDEDDSDNGSDSGA 231
GG GDGG G G G G DGG G +GA
Sbjct: 1199 GGVGGDGGEGASGLGLGLSGFDGGQGGQGGAGGSAGA 1235
Score = 29.6 bits (65), Expect = 7.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDS 229
GG++G GG NG G G G GG G+D+
Sbjct: 543 GGNTGVGGTNGSGGQGGTGGAGGAGGAGGVGADN 576
Score = 29.6 bits (65), Expect = 7.7
Identities = 14/36 (38%), Positives = 16/36 (43%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GG G GG N G GDGG+ G + GA
Sbjct: 1749 GGQGGKGGLNSTGLASAASGDGGNGGAGGAGGNGGA 1784
>RALY_HUMAN (Q9UKM9) RNA-binding protein Raly (hnRNP associated with
lethal yellow homolog) (Autoantigen p542)
Length = 306
Score = 38.9 bits (89), Expect = 0.013
Identities = 26/101 (25%), Positives = 43/101 (41%), Gaps = 11/101 (10%)
Query: 127 PVTITINTTFIAASTAIVVVATTNLRRFLFHGLGVVTEATAVVTNMMLTVVAATKVMTKV 186
PV + +T + S+A + + ++ L+ + TE T + +N+ + ++ +
Sbjct: 163 PVKLFARSTAVTTSSAKIKLKSSELQ-------AIKTELTQIKSNIDALLSRLEQIAAEQ 215
Query: 187 VVAPTMVVVGGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGS 227
P G GDGG GGG G G G GG GS
Sbjct: 216 KANPD----GKKKGDGGGAGGGGGGGGSGGGGSGGGGGGGS 252
>MAM_DROME (P21519) Neurogenic protein mastermind
Length = 1596
Score = 37.7 bits (86), Expect = 0.028
Identities = 19/61 (31%), Positives = 33/61 (53%), Gaps = 5/61 (8%)
Query: 168 VVTNMMLTVVAATKVMTKVVVAPTMVVVGGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGS 227
+ TN+ + + T V ++ V GG G GGN+G + +G G GG+ ++++NG
Sbjct: 334 ISTNVTVKALTNTSVKSEPGVGG-----GGGGGGGGNSGNNNNNGGGGGGGNGNNNNNGG 388
Query: 228 D 228
D
Sbjct: 389 D 389
>THYD_CLAFS (Q9UVI4) Trihydrophobin precursor (CFTH1)
Length = 394
Score = 37.4 bits (85), Expect = 0.037
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 3/38 (7%)
Query: 196 GGDSGDGGNNGGGS-GHGD--KGDGGDEDDSDNGSDSG 230
GG+ G+GGNNGG + G+GD G+GG+ S+ G + G
Sbjct: 283 GGNGGNGGNNGGNNGGNGDYPGGNGGNNGGSNGGGNGG 320
Score = 35.8 bits (81), Expect = 0.11
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 196 GGDSG--DGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GG++G +GGNNGG +G + G+ G + +NG ++G
Sbjct: 151 GGNNGGNNGGNNGGNNGGNNGGNNGGNNGGNNGGNNG 187
Score = 35.8 bits (81), Expect = 0.11
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 196 GGDSG--DGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GG++G +GGNNGG +G + G+ G + +NG ++G
Sbjct: 155 GGNNGGNNGGNNGGNNGGNNGGNNGGNNGGNNGGNNG 191
Score = 35.8 bits (81), Expect = 0.11
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 196 GGDSGD-GGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GG+ G+ GGNNGG +G + G+ G + +NG ++G
Sbjct: 148 GGNGGNNGGNNGGNNGGNNGGNNGGNNGGNNGGNNG 183
Score = 35.4 bits (80), Expect = 0.14
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 196 GGDSG--DGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GG++G +GGNNGG +G + G+ G + +NG + G
Sbjct: 159 GGNNGGNNGGNNGGNNGGNNGGNNGGNNGGNNGGNGG 195
Score = 33.9 bits (76), Expect = 0.41
Identities = 17/53 (32%), Positives = 26/53 (48%), Gaps = 4/53 (7%)
Query: 182 VMTKVVVAPTMVVVGGDSGDGGNNGGGSGHGDKGDGGDEDDSD----NGSDSG 230
V + V+ + G G+GGNNGG G+G G + + D NG ++G
Sbjct: 259 VAGQAVLCQPAIGGGNPGGNGGNNGGNGGNGGNNGGNNGGNGDYPGGNGGNNG 311
Score = 33.9 bits (76), Expect = 0.41
Identities = 15/41 (36%), Positives = 24/41 (57%), Gaps = 6/41 (14%)
Query: 196 GGDSGDGGNNGG------GSGHGDKGDGGDEDDSDNGSDSG 230
G + G+GGNNGG G+G + G+ G + +NG ++G
Sbjct: 131 GNNGGNGGNNGGNTDYPGGNGGNNGGNNGGNNGGNNGGNNG 171
Score = 32.7 bits (73), Expect = 0.91
Identities = 12/20 (60%), Positives = 17/20 (85%)
Query: 200 GDGGNNGGGSGHGDKGDGGD 219
G+GGNNGG +G G+ G+GG+
Sbjct: 305 GNGGNNGGSNGGGNGGNGGN 324
Score = 32.3 bits (72), Expect = 1.2
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 182 VMTKVVVAPTMVVVGGDSGDGGNNGGGSGHGDKGDGGDED-DSDNGSDSG 230
V + V+ + GG+ G+ G NGG +G +GG+ D NG ++G
Sbjct: 106 VAGQAVLCQDSINGGGNGGNNGGNGGNNGGNGGNNGGNTDYPGGNGGNNG 155
Score = 32.0 bits (71), Expect = 1.6
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 196 GGDSG--DGGNNGGGSGHGDKGDGGDEDDSDNGSDSGAL 232
GG++G +GGNNGG +G + G+GG+ + +G L
Sbjct: 171 GGNNGGNNGGNNGGNNGGNNGGNGGNGGNGYQACPAGLL 209
Score = 31.6 bits (70), Expect = 2.0
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 196 GGDSGD-GGNNGGGSGH--GDKGDGGDEDDSDNGSDSG 230
GG++G GGNNGG + + G+ G+ G + +NG ++G
Sbjct: 130 GGNNGGNGGNNGGNTDYPGGNGGNNGGNNGGNNGGNNG 167
Score = 31.2 bits (69), Expect = 2.7
Identities = 12/35 (34%), Positives = 21/35 (59%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GG++ G NGG +G + G+ G + +NG ++G
Sbjct: 141 GGNTDYPGGNGGNNGGNNGGNNGGNNGGNNGGNNG 175
Score = 30.0 bits (66), Expect = 5.9
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G + G+ G N GG+ G+ G ++ NG + G
Sbjct: 164 GNNGGNNGGNNGGNNGGNNGGNNGGNNGGNGGNGG 198
>SR68_HUMAN (Q9UHB9) Signal recognition particle 68 kDa protein
(SRP68)
Length = 627
Score = 37.4 bits (85), Expect = 0.037
Identities = 15/36 (41%), Positives = 22/36 (60%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GG SG GG +GGG G +G GG+E+ + +G+
Sbjct: 13 GGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGS 48
Score = 32.7 bits (73), Expect = 0.91
Identities = 16/35 (45%), Positives = 19/35 (53%), Gaps = 3/35 (8%)
Query: 194 VVGGDSGDGGNNGGGSGHGDKGDG---GDEDDSDN 225
V GG G G GGGSG G G G G E++ +N
Sbjct: 7 VPGGGGGGGSGGGGGSGGGGSGGGRGAGGEENKEN 41
>HYR1_CANAL (P46591) Hyphally regulated protein precursor
Length = 937
Score = 37.4 bits (85), Expect = 0.037
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
G G G NNG GSGH D G S+ G+ SG+
Sbjct: 764 GSGQGSGPNNGSGSGHNDGSGSGSNQGSNPGAGSGS 799
Score = 37.4 bits (85), Expect = 0.037
Identities = 16/36 (44%), Positives = 21/36 (57%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
G SG G NNG GSG G + S++GS+SG+
Sbjct: 702 GSGSGSGSNNGSGSGSQSGSGSGSQSGSESGSNSGS 737
Score = 33.1 bits (74), Expect = 0.70
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 199 SGDGGNNGGGSG--HGDKGDGGDEDDSDNGSDS 229
SG G NNG GSG G +G G + S +GS S
Sbjct: 643 SGSGSNNGSGSGSTEGSEGGSGSNEGSQSGSGS 675
Score = 32.7 bits (73), Expect = 0.91
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
G ++G G + GGS +G D G + S +GS++G+
Sbjct: 616 GPNNGSGSGSEGGSNNGSGSDSGSNNGSGSGSNNGS 651
Score = 32.0 bits (71), Expect = 1.6
Identities = 23/68 (33%), Positives = 29/68 (41%), Gaps = 11/68 (16%)
Query: 164 EATAVVTNMMLTVVAATKVMTKVVVAPTMVVVGGDSGDGGNNGGGSGHGDKGDGGDEDDS 223
+ TN+ T V AT T GGD+ GGN G S HG G + S
Sbjct: 553 DVVTYTTNVPHTTVDATTTTT--------TSTGGDNSTGGNESG-SNHGP--GNGSTEGS 601
Query: 224 DNGSDSGA 231
NGS +G+
Sbjct: 602 GNGSGAGS 609
Score = 32.0 bits (71), Expect = 1.6
Identities = 14/36 (38%), Positives = 18/36 (49%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
G SG +G GS G G + S+NGS SG+
Sbjct: 612 GSQSGPNNGSGSGSEGGSNNGSGSDSGSNNGSGSGS 647
Score = 31.6 bits (70), Expect = 2.0
Identities = 14/34 (41%), Positives = 17/34 (49%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDS 229
G S G NNG GSG + G + S+ GS S
Sbjct: 632 GSGSDSGSNNGSGSGSNNGSGSGSTEGSEGGSGS 665
Score = 31.2 bits (69), Expect = 2.7
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Query: 196 GGDSGDGGNNGG------GSGHGDKGDGGDEDDSDNGSDSGA 231
G SG G N G GSG G +G + SD+GS++G+
Sbjct: 602 GNGSGAGSNEGSQSGPNNGSGSGSEGGSNNGSGSDSGSNNGS 643
Score = 31.2 bits (69), Expect = 2.7
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
G + G G N G G + G S+NGS SG+
Sbjct: 682 GSEGGSGSNEGSNHGSNEGSGSGSGSGSNNGSGSGS 717
Score = 31.2 bits (69), Expect = 2.7
Identities = 13/36 (36%), Positives = 18/36 (49%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
G S +G N+G G G G + S +GS SG+
Sbjct: 686 GSGSNEGSNHGSNEGSGSGSGSGSNNGSGSGSQSGS 721
Score = 31.2 bits (69), Expect = 2.7
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 199 SGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
S G N G GSG G + G S +GS SG+
Sbjct: 693 SNHGSNEGSGSGSGSGSNNGSGSGSQSGSGSGS 725
Score = 30.4 bits (67), Expect = 4.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
G S +G NG G+G + G + S +GS+ G+
Sbjct: 594 GNGSTEGSGNGSGAGSNEGSQSGPNNGSGSGSEGGS 629
Score = 30.4 bits (67), Expect = 4.5
Identities = 14/36 (38%), Positives = 18/36 (49%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
G SG G + GSG + G S+NGS SG+
Sbjct: 620 GSGSGSEGGSNNGSGSDSGSNNGSGSGSNNGSGSGS 655
Score = 30.0 bits (66), Expect = 5.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G +G +G GSG+G + G +NGS SG
Sbjct: 744 GAGNGSNEGSGQGSGNGSEAGSGQGSGPNNGSGSG 778
Score = 30.0 bits (66), Expect = 5.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 199 SGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
SG G +G GSG + G S+ GS+ GA
Sbjct: 713 SGSGSQSGSGSGSQSGSESGSNSGSNEGSNPGA 745
>ZIC2_HUMAN (O95409) Zinc finger protein ZIC 2 (Zinc finger protein
of the cerebellum 2)
Length = 532
Score = 37.0 bits (84), Expect = 0.048
Identities = 22/62 (35%), Positives = 25/62 (39%), Gaps = 1/62 (1%)
Query: 170 TNMMLTVVAATKVMTKVVVAPTMVVVGGDSGDGGNNGG-GSGHGDKGDGGDEDDSDNGSD 228
+N+ AA A + V GG SG GG GG G G G G GG GS
Sbjct: 451 SNLSPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGGGGGAGGGGGGSS 510
Query: 229 SG 230
G
Sbjct: 511 GG 512
Score = 29.6 bits (65), Expect = 7.7
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GG G G+ GGG G G G GG +G+ G
Sbjct: 487 GGSGGGSGSGGGGGGAG--GGGGGSSGGGSGTAGG 519
>RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3
homolog 2 (hnRNP A3(B))
Length = 385
Score = 36.6 bits (83), Expect = 0.063
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G GDGGN GGG G+G +G GG + G G
Sbjct: 264 GFGGDGGNYGGGPGYGGRGYGGSPGYGNQGGGYG 297
Score = 32.3 bits (72), Expect = 1.2
Identities = 15/35 (42%), Positives = 17/35 (47%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD G GGN G G G G++G G G G
Sbjct: 224 GGDGGGGGNFGRGGGFGNRGGYGGGGGRGGGYGGG 258
Score = 30.0 bits (66), Expect = 5.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G G GG G G G+G GDG + D G+ G
Sbjct: 240 GNRGGYGGGGGRGGGYGGGGDGYNGFGGDGGNYGG 274
Score = 29.6 bits (65), Expect = 7.7
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GG G+ G GGG G G GG + + G D G
Sbjct: 236 GGGFGNRGGYGGGGGRGGGYGGGGDGYNGFGGDGG 270
>RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3
homolog 1 (hnRNP A3(A))
Length = 373
Score = 36.6 bits (83), Expect = 0.063
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G GDGGN GGG G+G +G GG + G G
Sbjct: 264 GFGGDGGNYGGGPGYGGRGYGGSPGYGNQGGGYG 297
Score = 30.8 bits (68), Expect = 3.5
Identities = 15/35 (42%), Positives = 16/35 (44%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GG G GG GG G G G GGD + G G
Sbjct: 245 GGGGGRGGGGYGGGGDGYNGFGGDGGNYGGGPGYG 279
Score = 30.4 bits (67), Expect = 4.5
Identities = 16/36 (44%), Positives = 18/36 (49%), Gaps = 1/36 (2%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDN-GSDSG 230
GG G+ G GGG G G G GG D + G D G
Sbjct: 235 GGGFGNRGGYGGGGGRGGGGYGGGGDGYNGFGGDGG 270
Score = 29.6 bits (65), Expect = 7.7
Identities = 16/35 (45%), Positives = 18/35 (50%), Gaps = 2/35 (5%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GG G GG GGG G G GDG + D G+ G
Sbjct: 242 GGYGGGGGRGGGGYGGG--GDGYNGFGGDGGNYGG 274
>RFX1_HUMAN (P22670) MHC class II regulatory factor RFX1 (RFX)
(Enhancer factor C) (EF-C)
Length = 979
Score = 36.6 bits (83), Expect = 0.063
Identities = 29/108 (26%), Positives = 43/108 (38%), Gaps = 14/108 (12%)
Query: 126 PPVTITINTTFIAASTAIVVVATTNLRRFLFHGLGVVTEATAVVTNMMLTVVAATKVMTK 185
P T T +T++ A+ V+T ++A A +M + V + V +
Sbjct: 321 PLYTQTASTSYYEAAGTATQVSTP-----------ATSQAVASSGSMPMYVSGSQVVASS 369
Query: 186 VVVAPTMVVVGGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGALI 233
A T SG GG+ GGG G G G GG GS +G +
Sbjct: 370 ---ASTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGAGTYV 414
>SR68_CANFA (Q00004) Signal recognition particle 68 kDa protein
(SRP68)
Length = 622
Score = 36.2 bits (82), Expect = 0.083
Identities = 16/45 (35%), Positives = 23/45 (50%)
Query: 187 VVAPTMVVVGGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
+ A V GG G GG GGG G +G GG+E+ + +G+
Sbjct: 1 MAAEKQVPGGGGGGGGGGGGGGGSGGGRGAGGEENKENERPSAGS 45
>GRP1_PETHY (P09789) Glycine-rich cell wall structural protein 1
precursor
Length = 384
Score = 36.2 bits (82), Expect = 0.083
Identities = 18/37 (48%), Positives = 20/37 (53%)
Query: 195 VGGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
VGG +G GG GGG G G G GG S +G GA
Sbjct: 159 VGGGAGAGGGVGGGGGFGGGGGGGVGGGSGHGGGFGA 195
Score = 33.5 bits (75), Expect = 0.54
Identities = 18/36 (50%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 196 GGDSGDGGNNGGGSGHGDK-GDGGDEDDSDNGSDSG 230
GG SG GG GGGSGHG G GG G +G
Sbjct: 216 GGGSGGGGGIGGGSGHGGGFGAGGGVGGGVGGGAAG 251
Score = 32.0 bits (71), Expect = 1.6
Identities = 16/36 (44%), Positives = 18/36 (49%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GG G GG GGG G G G GG + +G GA
Sbjct: 120 GGGLGGGGGLGGGGGGGAGGGGGVGGGAGSGGGFGA 155
Score = 31.6 bits (70), Expect = 2.0
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 194 VVGGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
V GG +G GG GGG G G G GG S +G GA
Sbjct: 245 VGGGAAGGGGGGGGGGGGGGGGLGG---GSGHGGGFGA 279
Score = 31.6 bits (70), Expect = 2.0
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 195 VGGDSGDG--GNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
VGG +G G G GGG G G G GG S +G GA
Sbjct: 199 VGGGAGGGLGGGVGGGGGGGSGGGGGIGGGSGHGGGFGA 237
Score = 30.4 bits (67), Expect = 4.5
Identities = 15/35 (42%), Positives = 15/35 (42%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GG G GG GGG G G G GG G G
Sbjct: 232 GGGFGAGGGVGGGVGGGAAGGGGGGGGGGGGGGGG 266
Score = 30.0 bits (66), Expect = 5.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Query: 195 VGGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
+GG G GG G G G G G GG G+ GA
Sbjct: 83 LGGGGGLGGGGGAGGGGGLGGGGGAGGGFGGGAGGGA 119
>GRA6_TOXGO (Q27003) Dense granule protein 6 (Protein GRA 6)
(Antigen p32) (Protein p33)
Length = 230
Score = 36.2 bits (82), Expect = 0.083
Identities = 23/66 (34%), Positives = 33/66 (49%), Gaps = 5/66 (7%)
Query: 159 LGVVTEATAVVTNMMLTVVAATKVMTKVVVAPTMVVVGGDSGDGGNNGG--GSGHGDKGD 216
+G V A +V MLT + + P+ G D+G+ NGG G G+G +G+
Sbjct: 154 IGAVVLAVSVA---MLTAFFLRRTGRRSPQEPSGDGGGNDAGNNAGNGGNEGRGYGGRGE 210
Query: 217 GGDEDD 222
GG EDD
Sbjct: 211 GGAEDD 216
>PUR_HUMAN (Q00577) Transcriptional activator protein PUR-alpha
(Purine-rich single-stranded DNA-binding protein alpha)
Length = 322
Score = 35.8 bits (81), Expect = 0.11
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGALIRLRVIVRDKHMY 245
G SG GG GGG G G G GG ++ L RV +++K Y
Sbjct: 25 GSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQHETQELASKRVDIQNKRFY 74
>HXB3_MOUSE (P09026) Homeobox protein Hox-B3 (Hox-2.7) (MH-23)
Length = 433
Score = 35.8 bits (81), Expect = 0.11
Identities = 17/32 (53%), Positives = 17/32 (53%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGS 227
GG G GG GGGS G G GG D S GS
Sbjct: 157 GGGGGGGGGGGGGSSGGGGGGGGGGDKSPPGS 188
Score = 31.6 bits (70), Expect = 2.0
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGALIRLRVIVRDKHMYFAEQSISLQ 254
GG G GG GGG G G GG D A + R + Y + Q + L+
Sbjct: 154 GGGGGGGGGGGGGGGGSSGGGGGGGGGGDKSPPGSAASK-----RARTAYTSAQLVELE 207
Score = 31.6 bits (70), Expect = 2.0
Identities = 15/51 (29%), Positives = 24/51 (46%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGALIRLRVIVRDKHMYF 246
GG G GG++GGG G G GD + + A +++ +K +F
Sbjct: 162 GGGGGGGGSSGGGGGGGGGGDKSPPGSAASKRARTAYTSAQLVELEKEFHF 212
>CAN_CAEEL (P34308) Calpain clp-1 (EC 3.4.22.-)
Length = 783
Score = 35.8 bits (81), Expect = 0.11
Identities = 17/46 (36%), Positives = 22/46 (46%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGALIRLRVIVRD 241
GG G GG G G G+G G G + D NG+ R R + +D
Sbjct: 55 GGGGGGGGGGGFGGGNGGFGGGSNYDQGGNGNSGDQQKRKRDMAKD 100
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.321 0.137 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,292,780
Number of Sequences: 164201
Number of extensions: 1373240
Number of successful extensions: 21216
Number of sequences better than 10.0: 252
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 13801
Number of HSP's gapped (non-prelim): 3901
length of query: 262
length of database: 59,974,054
effective HSP length: 108
effective length of query: 154
effective length of database: 42,240,346
effective search space: 6505013284
effective search space used: 6505013284
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Lotus: description of TM0008.6