BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0008.15
(375 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SCRA_LIMPO (Q25390) Alpha-scruin 40 0.010
SCRB_LIMPO (Q25386) Beta-scruin 38 0.048
KHL5_HUMAN (Q96PQ7) Kelch-like protein 5 36 0.18
KEAP_RAT (P57790) Kelch-like ECH-associated protein 1 (Cytosolic... 34 0.53
KBTA_RAT (Q9ER30) Kelch repeat and BTB domain containing protein... 34 0.69
KBTA_HUMAN (O60662) Kelch repeat and BTB domain containing prote... 33 0.90
2AAA_SCHPO (Q9UT08) Protein phosphatase PP2A regulatory subunit ... 33 1.2
ENC1_MOUSE (O35709) Ectoderm-neural cortex-1 protein (ENC-1) 32 2.0
MURA_WIGBR (Q8D2M5) UDP-N-acetylglucosamine 1-carboxyvinyltransf... 32 2.6
KH17_RAT (Q8K430) Kelch-like protein 17 (Actinfilin) 32 2.6
KH17_MOUSE (Q6TDP3) Kelch-like protein 17 (Actinfilin) 32 2.6
KH17_HUMAN (Q6TDP4) Kelch-like protein 17 (Actinfilin) 32 2.6
GLMS_CORGL (Q8NND3) Glucosamine--fructose-6-phosphate aminotrans... 32 2.6
TFS2_SCHPO (P49373) Transcription elongation factor S-II (TFIIS) 32 3.4
KH10_RAT (Q6JEL3) Kelch-like protein 10 32 3.4
KH10_MOUSE (Q9D5V2) Kelch-like protein 10 32 3.4
KH10_HUMAN (Q6JEL2) Kelch-like protein 10 32 3.4
CADI_MYCTU (P71940) Cadmium-induced protein cadI 32 3.4
KEAP_MOUSE (Q9Z2X8) Kelch-like ECH-associated protein 1 (Cytosol... 31 4.5
Z179_RAT (O70418) Zinc finger protein 179 (Brain finger protein) 31 5.8
>SCRA_LIMPO (Q25390) Alpha-scruin
Length = 918
Score = 40.0 bits (92), Expect = 0.010
Identities = 29/112 (25%), Positives = 44/112 (38%), Gaps = 6/112 (5%)
Query: 120 FSIDALHLDWHHAPAPRVWRTDPIVARVGQRVVVAGGACDFEDDPLAVEMYDMESNTWVM 179
F + W R R V + +R+ V GG + AVEMY+ E + W
Sbjct: 158 FQLTVQTKQWRKRADMRYARAHHNVTVMDERIFVFGGRDSNGEILAAVEMYEPEMDQWTT 217
Query: 180 CQSMPAMLKGSSGSTWLSVAVAGEEVLVTEES------SGMTFCFDTVSMKW 225
S+P + GS+ + + V +E S FCFD ++ KW
Sbjct: 218 LASIPEPMMGSAIANNEGIIYVIGGVTTNKEKKPEGNLSNKIFCFDPLNNKW 269
Score = 37.4 bits (85), Expect = 0.062
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 155 GGACDFEDDPLAVEMYDMESNTWVMCQSMPAMLKGSS-----GSTWLSVAVAGEEVLVTE 209
GG D +VE YD ESN W M +SMP+ G + G WL + G + TE
Sbjct: 701 GGRDDIGRLVSSVESYDHESNEWTMEKSMPSPRMGMAAVAHGGYIWL---LGGLTSMTTE 757
Query: 210 ESSGM--TFCFDTVSMKW 225
E + C+D V W
Sbjct: 758 EPPVLDDVLCYDPVFKHW 775
>SCRB_LIMPO (Q25386) Beta-scruin
Length = 916
Score = 37.7 bits (86), Expect = 0.048
Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 23/142 (16%)
Query: 90 HPLKGHPSATAAVRSSHSTLLYTLSPAEFAFSIDALHLDWHHAPAPRVWRTDPIVARVGQ 149
H +KG AT+ +T TL ++ D HH V + +
Sbjct: 145 HCIKGKMQATS------TTFQLTLDVKQWRRRADMPSARAHHG-----------VTIMDE 187
Query: 150 RVVVAGGACDFEDDPLAVEMYDMESNTWVMCQSMPAMLKGS--SGSTWLSVAVAGEEVLV 207
R+ V GG + +VEMY+ E + W S+P L GS + + L V G
Sbjct: 188 RIFVFGGKDSNGNIIASVEMYEPELDQWTSLASIPEPLMGSAVTNNEGLIYVVGGLTTKK 247
Query: 208 TEESSGM----TFCFDTVSMKW 225
+ G+ +CFD ++ KW
Sbjct: 248 EKNQEGVLSNKIYCFDPLNNKW 269
>KHL5_HUMAN (Q96PQ7) Kelch-like protein 5
Length = 755
Score = 35.8 bits (81), Expect = 0.18
Identities = 42/194 (21%), Positives = 71/194 (35%), Gaps = 21/194 (10%)
Query: 72 TAHAYDPRSHVWVEMKLPHPLKGHPSATAAVRS------SHSTLLYTLSPAEFAFSIDAL 125
T Y+P++ W M P H A + H Y + + D
Sbjct: 530 TVECYNPKTKTWSVMP-PMSTHRHGLGVAVLEGPMYAVGGHDGWSYLNTVERW----DPQ 584
Query: 126 HLDWHHAPAPRVWRTDPIVARVGQRVVVAGGACDFEDDPLAVEMYDMESNTWVMCQSMPA 185
W+ R+ VA + ++ GG D +VE +D +N W +C M
Sbjct: 585 ARQWNFVATMSTPRSTVGVAVLSGKLYAVGGR-DGSSCLKSVECFDPHTNKWTLCAQMSK 643
Query: 186 MLKGSSGSTW--LSVAVAGEEVLVTEESSGMTFC---FDTVSMKWDGPYDLCPDQ-SVGY 239
G +TW L A+ G + + +S ++ C +D + W + + +VG
Sbjct: 644 RRGGVGVTTWNGLLYAIGGHDAPASNLTSRLSDCVERYDPKTDMWTAVASMSISRDAVGV 703
Query: 240 CVTGMLGKRLMVAG 253
C +LG +L G
Sbjct: 704 C---LLGDKLYAVG 714
>KEAP_RAT (P57790) Kelch-like ECH-associated protein 1 (Cytosolic
inhibitor of Nrf2) (INrf2)
Length = 624
Score = 34.3 bits (77), Expect = 0.53
Identities = 29/97 (29%), Positives = 40/97 (40%), Gaps = 12/97 (12%)
Query: 152 VVAGGACDFEDDPLAVEMYDMESNTWVMCQSMPAMLKGSSGSTWLSVAVAGEEVLVTEES 211
+ A G D +D +VE YD+E+ TW SM + L +AV + V
Sbjct: 519 IYAAGGYDGQDQLNSVERYDVETETWTFVASM------KHRRSALGIAVHQGRIYVLGGY 572
Query: 212 SGMTF-----CFDTVSMKWDGPYDLCPDQS-VGYCVT 242
G TF C+D + W L +S VG VT
Sbjct: 573 DGHTFLDSVECYDPDTDTWSEVTRLTSGRSGVGVAVT 609
>KBTA_RAT (Q9ER30) Kelch repeat and BTB domain containing protein 10
(Kelch-related protein 1) (Kel-like protein 23)
(Sarcosin)
Length = 606
Score = 33.9 bits (76), Expect = 0.69
Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 8/136 (5%)
Query: 143 IVARVGQRVVVAGGACDFE--DDPLAVEMYDME--SNTWVMCQSMPAM--LKGSSGSTWL 196
IV + Q VV G D E D PL + ++ S+ WV +P+ L G
Sbjct: 340 IVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDK 399
Query: 197 SVAVAGEEVLVTEESSGMTFCFDTVSMKWDGPYDLCPDQSVGYCVTGMLGKRLMVAGVVG 256
VAG++ L TE S C+D V+ KW +L P + G+ V G + G
Sbjct: 400 IYVVAGKD-LQTEASLDSVLCYDPVAAKWSEVKNL-PIKVYGHNVISHNGMIYCLGGKTD 457
Query: 257 DGEDVKAVKLWAVKGG 272
D + V ++ K G
Sbjct: 458 DKKCTNRVFIYNPKKG 473
Score = 32.7 bits (73), Expect = 1.5
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 76 YDPRSHVWVEMK-LPHPLKGHPSATAAVRSSHSTLLYTLSP-------AEFAFSIDALHL 127
YDP + W E+K LP + GH SH+ ++Y L F +
Sbjct: 420 YDPVAAKWSEVKNLPIKVYGHNVI------SHNGMIYCLGGKTDDKKCTNRVFIYNPKKG 473
Query: 128 DWHHAPAPRVWRTDPIVARVGQRVVVAGGACDFEDDPLAVEMYDMESNTWVMCQSMP 184
DW + R+ VA ++V+AGG + + +VE +D+++N W + P
Sbjct: 474 DWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTE-DGLSASVEAFDLKTNKWEVMTEFP 529
>KBTA_HUMAN (O60662) Kelch repeat and BTB domain containing protein
10 (Kelch-related protein 1) (Kel-like protein 23)
(Sarcosin)
Length = 606
Score = 33.5 bits (75), Expect = 0.90
Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 8/136 (5%)
Query: 143 IVARVGQRVVVAGGACDFE--DDPLAVEMYDMES--NTWVMCQSMPAM--LKGSSGSTWL 196
IV + Q VV G D E D PL + ++S + WV +P+ L G
Sbjct: 340 IVTQQNQIYVVGGLYVDEENKDQPLQSYFFQLDSIASEWVGLPPLPSARCLFGLGEVDDK 399
Query: 197 SVAVAGEEVLVTEESSGMTFCFDTVSMKWDGPYDLCPDQSVGYCVTGMLGKRLMVAGVVG 256
VAG++ L TE S C+D V+ KW+ L P + G+ V G + G
Sbjct: 400 IYVVAGKD-LQTEASLDSVLCYDPVAAKWNEVKKL-PIKVYGHNVISHKGMIYCLGGKTD 457
Query: 257 DGEDVKAVKLWAVKGG 272
D + V ++ K G
Sbjct: 458 DKKCTNRVFIFNPKKG 473
Score = 32.3 bits (72), Expect = 2.0
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 15/117 (12%)
Query: 76 YDPRSHVWVEMK-LPHPLKGHPSATAAVRSSHSTLLYTLSP-------AEFAFSIDALHL 127
YDP + W E+K LP + GH SH ++Y L F +
Sbjct: 420 YDPVAAKWNEVKKLPIKVYGHNVI------SHKGMIYCLGGKTDDKKCTNRVFIFNPKKG 473
Query: 128 DWHHAPAPRVWRTDPIVARVGQRVVVAGGACDFEDDPLAVEMYDMESNTWVMCQSMP 184
DW ++ R+ VA ++V+AGG + + +VE +D+ +N W + P
Sbjct: 474 DWKDLAPMKIPRSMFGVAVHKGKIVIAGGVTE-DGLSASVEAFDLTTNKWDVMTEFP 529
>2AAA_SCHPO (Q9UT08) Protein phosphatase PP2A regulatory subunit A
(PR65) (Protein phosphatase 2A 65 kDa regulatory
subunit)
Length = 590
Score = 33.1 bits (74), Expect = 1.2
Identities = 23/83 (27%), Positives = 40/83 (47%)
Query: 289 LEKFKGDSDELGSLEVTWVGNFVYLRNTLEIEELVMCEVVNGSRCEWRSVRNAAVDGGTR 348
L++ D DE+ S +GNFV E +++ + N + E VR+ AVD +
Sbjct: 55 LDESIDDEDEVLSALADQLGNFVDYVGGPEYAHVLLSPLENLAATEETVVRDKAVDSLNK 114
Query: 349 MVVCGSEVRLEDLQSAMVSGIQT 371
+ +C S+ +LE +V + T
Sbjct: 115 VCICLSQEQLEQYFVPLVQRLST 137
>ENC1_MOUSE (O35709) Ectoderm-neural cortex-1 protein (ENC-1)
Length = 589
Score = 32.3 bits (72), Expect = 2.0
Identities = 38/148 (25%), Positives = 58/148 (38%), Gaps = 18/148 (12%)
Query: 123 DALHLDWHHAPAPRVWRTDPIVARVGQRVVVAGG-----ACDFEDDPLA---VEMYDMES 174
D LH +W A V R A + + V GG C ++ VE YD +
Sbjct: 362 DTLHEEWSKAAPMLVARFGHGSAELKHCLYVVGGHTAATGCLPASPSVSLKQVEQYDPTT 421
Query: 175 NTWVMCQSMPAMLKGSSGSTWLSVAV---AGEEVLVTEESSGMTFCFDTVSMKWDGPYDL 231
N W M + + +G S + +S + A V+ + C+D +W P
Sbjct: 422 NKWTM---VAPLREGVSNAAVVSAKLKLFAFGGTSVSHDKLPKVQCYDQCENRWSVP-AT 477
Query: 232 CPDQSVGYCVTGMLGKRLMVAGVVGDGE 259
CP Q Y +LG ++ + G GD E
Sbjct: 478 CP-QPWRYTAAAVLGNQIFIMG--GDTE 502
>MURA_WIGBR (Q8D2M5) UDP-N-acetylglucosamine
1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate
transferase) (UDP-N-acetylglucosamine enolpyruvyl
transferase) (EPT)
Length = 418
Score = 32.0 bits (71), Expect = 2.6
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 122 IDALHLDWHHAPA-------PRVWRTDPIVARVGQRVVVAGGACDFEDDPLAVEMYDME 173
I+A ++ +HAP +W P++AR G+ + G C+ + P+ + +Y ++
Sbjct: 72 INAKNISIYHAPCNLVKTMRASIWALGPLLARFGEGSISLPGGCEIGNRPVDLHLYGLK 130
>KH17_RAT (Q8K430) Kelch-like protein 17 (Actinfilin)
Length = 640
Score = 32.0 bits (71), Expect = 2.6
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 129 WHHAPAPRVWRTDPIVARVGQRVVVAGGACDFEDDPLAVEMYDMESNTW 177
WH + R VA VG R+ GG D D VE YD +NTW
Sbjct: 367 WHVVASMSTRRARVGVAAVGNRLYAVGGY-DGTSDLATVESYDPVTNTW 414
>KH17_MOUSE (Q6TDP3) Kelch-like protein 17 (Actinfilin)
Length = 640
Score = 32.0 bits (71), Expect = 2.6
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 129 WHHAPAPRVWRTDPIVARVGQRVVVAGGACDFEDDPLAVEMYDMESNTW 177
WH + R VA VG R+ GG D D VE YD +NTW
Sbjct: 367 WHVVASMSTRRARVGVAAVGNRLYAVGGY-DGTSDLATVESYDPVTNTW 414
>KH17_HUMAN (Q6TDP4) Kelch-like protein 17 (Actinfilin)
Length = 642
Score = 32.0 bits (71), Expect = 2.6
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 129 WHHAPAPRVWRTDPIVARVGQRVVVAGGACDFEDDPLAVEMYDMESNTW 177
WH + R VA VG R+ GG D D VE YD +NTW
Sbjct: 369 WHVVASMSTRRARVGVAAVGNRLYAVGGY-DGTSDLATVESYDPVTNTW 416
>GLMS_CORGL (Q8NND3) Glucosamine--fructose-6-phosphate
aminotransferase [isomerizing] (EC 2.6.1.16)
(Hexosephosphate aminotransferase)
(D-fructose-6-phosphate amidotransferase) (GFAT)
(L-glutamine-D-fructose-6-phosphate amidotransferase)
(Glucosamine-6-ph
Length = 622
Score = 32.0 bits (71), Expect = 2.6
Identities = 28/101 (27%), Positives = 41/101 (39%), Gaps = 8/101 (7%)
Query: 202 GEEVLVTEESSGMTFCFDTVSMKWDGPYDLCPDQSVGYCVTGMLGKRLMVAGVVGDGEDV 261
GE L ++ S + + V + D + D Y +T G VG DV
Sbjct: 195 GENFLGSDVSGFIDYTRKAVELANDQVVTITADD---YAITNFDGSE-----AVGKPFDV 246
Query: 262 KAVKLWAVKGGLGSGMTEEVGEMPEELLEKFKGDSDELGSL 302
+ A KGG GS M +E+ + P + + G DE G L
Sbjct: 247 EWDAAAAEKGGFGSFMEKEIHDQPAAVRDTLMGRLDEDGKL 287
>TFS2_SCHPO (P49373) Transcription elongation factor S-II (TFIIS)
Length = 293
Score = 31.6 bits (70), Expect = 3.4
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 254 VVGDGEDVKAVKLWAVKGGLGSGMTEEVGEMPEELLEKFKGDSDELGSLEVT 305
VV E +K +L V G L S E+VGE E+++K+K D + L+ T
Sbjct: 36 VVATEELLKETRLGLVVGKLRSHPNEKVGEQAREIVKKWKADVSKGRPLKTT 87
>KH10_RAT (Q6JEL3) Kelch-like protein 10
Length = 608
Score = 31.6 bits (70), Expect = 3.4
Identities = 38/177 (21%), Positives = 68/177 (37%), Gaps = 17/177 (9%)
Query: 72 TAHAYDPRSHVWVEMKLPHPLKGHPSATAAVRSSHSTLLYTLSPAEFAFSIDALHLD--- 128
TA Y+P ++ W + H + SAT + + + E F+ + + +
Sbjct: 402 TAERYEPETNQWTLIAPMHEQRSDASATTLYGKVY--ICGGFNGNECLFTAEVYNTESNQ 459
Query: 129 WHHAPAPRVWRTDPIVARVGQRVVVAGGACDFEDDPLAVEMYDMESNTWVMCQSMPAMLK 188
W R R+ V G+ V GG D + + E Y +NTW +++P M
Sbjct: 460 WTVIAPMRSRRSGIGVIAYGEHVYAVGG-FDGANRLRSAEAYSPVANTW---RTIPTMFN 515
Query: 189 GSSGSTWLSVAVAGEEVLVTEESSGMTF-----CFDTVSMKWDGPYDLCPDQSVGYC 240
S + V + + V +G T C+D + +W +D+ +S C
Sbjct: 516 PRSN---FGIEVVDDLLFVVGGFNGFTTTFNVECYDEKTDEWYDAHDMSIYRSALSC 569
>KH10_MOUSE (Q9D5V2) Kelch-like protein 10
Length = 608
Score = 31.6 bits (70), Expect = 3.4
Identities = 38/177 (21%), Positives = 68/177 (37%), Gaps = 17/177 (9%)
Query: 72 TAHAYDPRSHVWVEMKLPHPLKGHPSATAAVRSSHSTLLYTLSPAEFAFSIDALHLD--- 128
TA Y+P ++ W + H + SAT + + + E F+ + + +
Sbjct: 402 TAERYEPETNQWTLIAPMHEQRSDASATTLYGKVY--ICGGFNGNECLFTAEVYNTESNQ 459
Query: 129 WHHAPAPRVWRTDPIVARVGQRVVVAGGACDFEDDPLAVEMYDMESNTWVMCQSMPAMLK 188
W R R+ V G+ V GG D + + E Y +NTW +++P M
Sbjct: 460 WTVIAPMRSRRSGIGVIAYGEHVYAVGG-FDGANRLRSAEAYSPVANTW---RTIPTMFN 515
Query: 189 GSSGSTWLSVAVAGEEVLVTEESSGMTF-----CFDTVSMKWDGPYDLCPDQSVGYC 240
S + V + + V +G T C+D + +W +D+ +S C
Sbjct: 516 PRSN---FGIEVVDDLLFVVGGFNGFTTTFNVECYDEKTDEWYDAHDMSIYRSALSC 569
>KH10_HUMAN (Q6JEL2) Kelch-like protein 10
Length = 608
Score = 31.6 bits (70), Expect = 3.4
Identities = 38/177 (21%), Positives = 68/177 (37%), Gaps = 17/177 (9%)
Query: 72 TAHAYDPRSHVWVEMKLPHPLKGHPSATAAVRSSHSTLLYTLSPAEFAFSIDALHLD--- 128
TA Y+P ++ W + H + SAT + + + E F+ + + +
Sbjct: 402 TAERYEPETNQWTLIAPMHEQRSDASATTLYGKVY--ICGGFNGNECLFTAEVYNTESNQ 459
Query: 129 WHHAPAPRVWRTDPIVARVGQRVVVAGGACDFEDDPLAVEMYDMESNTWVMCQSMPAMLK 188
W R R+ V G+ V GG D + + E Y +NTW +++P M
Sbjct: 460 WTVIAPMRSRRSGIGVIAYGEHVYAVGG-FDGANRLRSAEAYSPVANTW---RTIPTMFN 515
Query: 189 GSSGSTWLSVAVAGEEVLVTEESSGMTF-----CFDTVSMKWDGPYDLCPDQSVGYC 240
S + V + + V +G T C+D + +W +D+ +S C
Sbjct: 516 PRSN---FGIEVVDDLLFVVGGFNGFTTTFNVECYDEKTDEWYDAHDMSIYRSALSC 569
>CADI_MYCTU (P71940) Cadmium-induced protein cadI
Length = 151
Score = 31.6 bits (70), Expect = 3.4
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 15/71 (21%)
Query: 189 GSSGSTWLSVAVAGEEVLVTEESSGMTFCFDTVSMKWDGPYDLCPDQSVGYCVTGMLGKR 248
GSS + +A E LVTE+ G T CF T W VTG G+R
Sbjct: 66 GSSNTVHAEIARLTEAGLVTEKEIGTTCCFATQDKVW---------------VTGPGGER 110
Query: 249 LMVAGVVGDGE 259
V V+ D E
Sbjct: 111 WEVYTVLADSE 121
>KEAP_MOUSE (Q9Z2X8) Kelch-like ECH-associated protein 1 (Cytosolic
inhibitor of Nrf2)
Length = 624
Score = 31.2 bits (69), Expect = 4.5
Identities = 27/97 (27%), Positives = 39/97 (39%), Gaps = 12/97 (12%)
Query: 152 VVAGGACDFEDDPLAVEMYDMESNTWVMCQSMPAMLKGSSGSTWLSVAVAGEEVLVTEES 211
+ A G D +D +VE YD+E+ TW M + L + V ++ V
Sbjct: 519 IYAAGGYDGQDQLNSVERYDVETETWTFVAPM------RHHRSALGITVHQGKIYVLGGY 572
Query: 212 SGMTF-----CFDTVSMKWDGPYDLCPDQS-VGYCVT 242
G TF C+D S W + +S VG VT
Sbjct: 573 DGHTFLDSVECYDPDSDTWSEVTRMTSGRSGVGVAVT 609
>Z179_RAT (O70418) Zinc finger protein 179 (Brain finger protein)
Length = 631
Score = 30.8 bits (68), Expect = 5.8
Identities = 18/47 (38%), Positives = 25/47 (52%)
Query: 252 AGVVGDGEDVKAVKLWAVKGGLGSGMTEEVGEMPEELLEKFKGDSDE 298
AG+V G V A V GG+G+G+ VG M +E E+ +G E
Sbjct: 579 AGMVAAGAAVGATGAAVVGGGVGAGLAATVGCMEKEEDERVQGGDRE 625
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.133 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,671,188
Number of Sequences: 164201
Number of extensions: 1996244
Number of successful extensions: 4333
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 4290
Number of HSP's gapped (non-prelim): 53
length of query: 375
length of database: 59,974,054
effective HSP length: 112
effective length of query: 263
effective length of database: 41,583,542
effective search space: 10936471546
effective search space used: 10936471546
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Lotus: description of TM0008.15