BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0004a.3
         (148 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ARG7_PHAAU (P32295) Indole-3-acetic acid induced protein ARG7          60  2e-09
AX6B_SOYBN (P33083) Auxin-induced protein 6B                           58  9e-09
AX10_SOYBN (P33080) Auxin-induced protein X10A                         57  1e-08
AX15_SOYBN (P33081) Auxin-induced protein 15A                          55  6e-08
AXX1_SOYBN (P33082) Auxin-induced protein X15                          54  9e-08
AXA5_SOYBN (P33079) Auxin-induced protein 10A5                         53  2e-07
SRR1_YEAST (Q06688) SRR1-like protein                                  28  5.5
M2B2_MOUSE (O54782) Epididymis-specific alpha-mannosidase precur...    28  7.2

>ARG7_PHAAU (P32295) Indole-3-acetic acid induced protein ARG7
          Length = 92

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 36/80 (45%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 25  KQISLRRHDSSDPRP-PSGCLYVYVGHERQRFAIPARFLNLPVFAGLLDETEEEFGL-RG 82
           K +S R   SS     P G L VYVG   +RF IP   LN P+F  LL + EEEFG    
Sbjct: 10  KTLSARNEASSKVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHP 69

Query: 83  SGGLILPCDVCFFTHIVKRL 102
            GGL +PC    F HI   L
Sbjct: 70  MGGLTIPCSEDLFQHITSCL 89


>AX6B_SOYBN (P33083) Auxin-induced protein 6B
          Length = 90

 Score = 57.8 bits (138), Expect = 9e-09
 Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 42  GCLYVYVGHERQRFAIPARFLNLPVFAGLLDETEEEFGL-RGSGGLILPCDVCFFTHIVK 100
           G L VYVG + +RF IP  +LN P F  LL + EEEFG    +GGL +PC    F HI  
Sbjct: 28  GYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITS 87

Query: 101 RLH 103
            L+
Sbjct: 88  FLN 90


>AX10_SOYBN (P33080) Auxin-induced protein X10A
          Length = 92

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 1/83 (1%)

Query: 22  MRWKQISLRRHDSSDPRPPSGCLYVYVGHERQRFAIPARFLNLPVFAGLLDETEEEFGL- 80
           +R   I+  +  S     P G L VYVG + +RF IP  +LN P F  LL++ EEEFG  
Sbjct: 8   IRKTSIAANQASSKSVEVPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYD 67

Query: 81  RGSGGLILPCDVCFFTHIVKRLH 103
              GGL +PC    F  +   L+
Sbjct: 68  HPMGGLTIPCKEDEFLTVTSHLN 90


>AX15_SOYBN (P33081) Auxin-induced protein 15A
          Length = 82

 Score = 55.1 bits (131), Expect = 6e-08
 Identities = 30/65 (46%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 40  PSGCLYVYVGHERQRFAIPARFLNLPVFAGLLDETEEEFGL-RGSGGLILPCDVCFFTHI 98
           P G L VYVG + +RF IP  +LN P F  LL + EEEFG     GGL +PC    F  I
Sbjct: 18  PKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCI 77

Query: 99  VKRLH 103
              L+
Sbjct: 78  TSCLN 82


>AXX1_SOYBN (P33082) Auxin-induced protein X15
          Length = 82

 Score = 54.3 bits (129), Expect = 9e-08
 Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 40 PSGCLYVYVGHERQRFAIPARFLNLPVFAGLLDETEEEFGL-RGSGGLILPCDVCFFTHI 98
          P G L VYVG + +RF IP  ++N P F  LL + EEEFG     GGL +PC    F  I
Sbjct: 18 PKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQRI 77


>AXA5_SOYBN (P33079) Auxin-induced protein 10A5
          Length = 93

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 28/66 (42%), Positives = 37/66 (55%), Gaps = 1/66 (1%)

Query: 40  PSGCLYVYVGHERQRFAIPARFLNLPVFAGLLDETEEEFGL-RGSGGLILPCDVCFFTHI 98
           P G   VYVG + +RF IP  +LN P F  LL + EEEFG     GGL +PC    F ++
Sbjct: 27  PKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNV 86

Query: 99  VKRLHK 104
              L++
Sbjct: 87  TAHLNE 92


>SRR1_YEAST (Q06688) SRR1-like protein
          Length = 274

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 15/39 (38%), Positives = 18/39 (45%)

Query: 94  FFTHIVKRLHKNENKYGKLTLEQFVITFSDAAANFDSCK 132
           F T I KR  KN N   KL +    I +   A  F SC+
Sbjct: 206 FATFIPKRKRKNRNNSSKLKVTPSDIDYDSIAPKFKSCQ 244


>M2B2_MOUSE (O54782) Epididymis-specific alpha-mannosidase precursor
            (EC 3.2.1.24) (Mannosidase alpha class 2B member 2)
          Length = 1018

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 15/43 (34%), Positives = 21/43 (47%), Gaps = 4/43 (9%)

Query: 19   QVMMRW----KQISLRRHDSSDPRPPSGCLYVYVGHERQRFAI 57
            Q++ RW    K   L+ H +S PRPP G +      E + F I
Sbjct: 972  QMLQRWHWSTKTDHLKGHPTSPPRPPGGSIITVYPKEIRTFFI 1014


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.326    0.141    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,269,315
Number of Sequences: 164201
Number of extensions: 690882
Number of successful extensions: 1454
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1445
Number of HSP's gapped (non-prelim): 8
length of query: 148
length of database: 59,974,054
effective HSP length: 100
effective length of query: 48
effective length of database: 43,553,954
effective search space: 2090589792
effective search space used: 2090589792
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)