Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0001.6
         (381 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule...   336  5e-92
APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot...    87  9e-17
APG_ARATH (P40602) Anter-specific proline-rich protein APG precu...    83  1e-15
ZYX_HUMAN (Q15942) Zyxin (Zyxin 2)                                     34  0.71
RBMC_MACMU (Q8SQ27) RNA-binding protein 12 (RNA binding motif pr...    33  0.92
RBMC_HUMAN (Q9NTZ6) RNA-binding protein 12 (RNA binding motif pr...    33  0.92
VF01_VACCV (P24356) Protein F1 (Fragment)                              32  2.7
VF01_VACCP (P68451) Protein F1 (Fragment)                              32  2.7
VF01_VACCC (P68450) Protein F1                                         32  2.7
SMR5_MOUSE (Q91ZW3) SWI/SNF related matrix associated actin depe...    32  2.7
ABG2_LACLC (Q48726) Abortive phage resistance protein abiGii           32  3.5
MYH7_MESAU (P13540) Myosin heavy chain, cardiac muscle beta isof...    31  4.6
MYH7_HUMAN (P12883) Myosin heavy chain, cardiac muscle beta isof...    31  4.6
MYH6_RAT (P02563) Myosin heavy chain, cardiac muscle alpha isofo...    31  4.6
MYH6_MOUSE (Q02566) Myosin heavy chain, cardiac muscle alpha iso...    31  4.6
MYH6_MESAU (P13539) Myosin heavy chain, cardiac muscle alpha iso...    31  4.6
MYH6_HUMAN (P13533) Myosin heavy chain, cardiac muscle alpha iso...    31  4.6
P115_MYCGE (P47540) P115 protein homolog                               31  6.0
NOE3_RAT (P63057) Noelin 3 precursor (Olfactomedin 3) (Optimedin)      31  6.0
NOE3_MOUSE (P63056) Noelin 3 precursor (Olfactomedin 3) (Optimedin)    31  6.0

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early
           nodule-specific protein homolog) (Latex allergen Hev b
           13)
          Length = 391

 Score =  336 bits (862), Expect = 5e-92
 Identities = 181/376 (48%), Positives = 239/376 (63%), Gaps = 15/376 (3%)

Query: 12  LSCTLCVNSVELKNSPPCAFPAIYNFGDSNSDTGGISAAFEPIPPPYGESFPQKPSARDC 71
           LS  LC+ S+    S  C FPAI+NFGDSNSDTGG +AAF P+ PPYGE+F  + + R  
Sbjct: 14  LSFLLCMLSLAYA-SETCDFPAIFNFGDSNSDTGGKAAAFYPLNPPYGETFFHRSTGRYS 72

Query: 72  DGRLIVDFIAEKLNLPYLSAYLNSLGTNYRHGANFATGGSTIRRQNETIFQY-GISPFSL 130
           DGRLI+DFIAE  NLPYLS YL+SLG+N++HGA+FAT GSTI+     I  + G SPF L
Sbjct: 73  DGRLIIDFIAESFNLPYLSPYLSSLGSNFKHGADFATAGSTIKLPTTIIPAHGGFSPFYL 132

Query: 131 DMQFVQFKQFKARTKQLYQEAKTALERSKLPVPEE--FSKALYTFDIGQNDLSVGFRMMN 188
           D+Q+ QF+QF  R++ + +      E     VPEE  F KALYTFDIGQNDL+ GF  + 
Sbjct: 133 DVQYSQFRQFIPRSQFIRETGGIFAEL----VPEEYYFEKALYTFDIGQNDLTEGFLNLT 188

Query: 189 FDQMRESMPDIVNQLASAVKNIYELGGRTFWIHNTAPIGCLPVNLFYKHNLPAGYLDPYG 248
            +++  ++PD+VN  ++ VK IY+LG RTFWIHNT PIGCL   L Y    P    D  G
Sbjct: 189 VEEVNATVPDLVNSFSANVKKIYDLGARTFWIHNTGPIGCLSFILTY---FPWAEKDSAG 245

Query: 249 CVKDQNVMAVEFNKQLKDRVVKLRTELPEAAITYVDLYAAKYGLISNTKNEGFVDPLKIC 308
           C K  N +A  FN +LK+ V +LR +LP A   +VD+Y+ KY L S  +  GF  PL  C
Sbjct: 246 CAKAYNEVAQHFNHKLKEIVAQLRKDLPLATFVHVDIYSVKYSLFSEPEKHGFEFPLITC 305

Query: 309 CGY---HVNDTHIWCG-TIGTANGKDVFGNACEKPSMYVSWDGVHYAEAANHWVANRILN 364
           CGY   +       CG T+   +G  +   +C  PS+ V+WDG HY EAAN +  ++I  
Sbjct: 306 CGYGGKYNFSVTAPCGDTVTADDGTKIVVGSCACPSVRVNWDGAHYTEAANEYFFDQIST 365

Query: 365 GSFTDPPTLITQACYR 380
           G+F+DPP  +  AC++
Sbjct: 366 GAFSDPPVPLNMACHK 381


>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein
           CEX) (Fragment)
          Length = 449

 Score = 86.7 bits (213), Expect = 9e-17
 Identities = 90/349 (25%), Positives = 147/349 (41%), Gaps = 48/349 (13%)

Query: 32  PAIYNFGDSNSDTGG---ISAAFEPIPPPYGESFPQK-PSARDCDGRLIVDFIAEKLNLP 87
           PA++ FGDS  DTG    +    +    PYG  FP    + R  +GR+  D+I++ L + 
Sbjct: 124 PAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGVK 183

Query: 88  YL-SAYLNSL--------GTNYRHGANFATGGSTIRRQNETIFQYGISPFSLDMQFVQFK 138
            +  AY++           ++   G +FA+GG+    Q    ++       LD Q   F+
Sbjct: 184 EIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQTSESWKVTTM---LD-QLTYFQ 239

Query: 139 QFKARTKQLYQEAKTALERSKLPVPEEFSKALYTFDIGQNDLSVGFRMMNFDQMRESMPD 198
            +K R K+L  + KT          +  SK       G NDL   +       ++  +  
Sbjct: 240 DYKKRMKKLVGKKKTK---------KIVSKGAAIVVAGSNDLIYTYFGNGAQHLKNDVDS 290

Query: 199 IVNQLA----SAVKNIYELGGRTFWIHNTAPIGCLPVNLFYKHNLPAGYLDPYGCVKDQN 254
               +A    S V  +Y  G R   +  T PIGC P     K  +         C +D N
Sbjct: 291 FTTMMADSAASFVLQLYGYGARRIGVIGTPPIGCTPSQRVKKKKI---------CNEDLN 341

Query: 255 VMAVEFNKQLKDRVVKLRTELPEAAITYVDLYAAKYGLISNTKNEGFVDPLKICCGYHVN 314
             A  FN +L   + +L   LP + I Y D+Y+    ++ + ++ GF +  K CC   + 
Sbjct: 342 YAAQLFNSKLVIILGQLSKTLPNSTIVYGDIYSIFSKMLESPEDYGFEEIKKPCCKIGLT 401

Query: 315 DTHIWCGTIGTANGKDVFGNACEKPSMYVSWDGVHYAEAANHWVANRIL 363
              ++C      N      NA    S Y+ WDG+H ++ A + ++NR L
Sbjct: 402 KGGVFCKERTLKN----MSNA----SSYLFWDGLHPSQRA-YEISNRKL 441


>APG_ARATH (P40602) Anter-specific proline-rich protein APG
           precursor
          Length = 534

 Score = 82.8 bits (203), Expect = 1e-15
 Identities = 82/344 (23%), Positives = 144/344 (41%), Gaps = 34/344 (9%)

Query: 32  PAIYNFGDSNSDTGG---ISAAFEPIPPPYGESFPQK-PSARDCDGRLIVDFIAEKLNLP 87
           PA++ FGDS  DTG    +    +    PYG  F  +  + R  +G +  D++A+ + + 
Sbjct: 203 PAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGVK 262

Query: 88  YL-SAYLNSL--GTNYRHGANFATGGSTIRRQNETIFQYGISPFSLDMQFVQFKQFKART 144
            +  AYL+      +   G +FA+GG+     N T  +   +   LD Q   F+ +  + 
Sbjct: 263 EIVPAYLDPKIQPNDLLTGVSFASGGAGY---NPTTSEAANAIPMLD-QLTYFQDYIEKV 318

Query: 145 KQLYQEAKTALERSKLPVPEEF-SKALYTFDIGQNDLSVGFRMMNFDQMRESMPD----I 199
            +L ++ K+  + + L    +  SK +     G NDL + +      +++  +      I
Sbjct: 319 NRLVRQEKSQYKLAGLEKTNQLISKGVAIVVGGSNDLIITYFGSGAQRLKNDIDSYTTII 378

Query: 200 VNQLASAVKNIYELGGRTFWIHNTAPIGCLPVNLFYKHNLPAGYLDPYGCVKDQNVMAVE 259
            +  AS V  +Y  G R   +  T P+GC+P     K  +         C ++ N  +  
Sbjct: 379 ADSAASFVLQLYGYGARRIGVIGTPPLGCVPSQRLKKKKI---------CNEELNYASQL 429

Query: 260 FNKQLKDRVVKLRTELPEAAITYVDLYAAKYGLISNTKNEGFVDPLKICCGYHVNDTHIW 319
           FN +L   + +L   LP +   Y+D+Y     ++      GF +  K CC   +      
Sbjct: 430 FNSKLLLILGQLSKTLPNSTFVYMDIYTIISQMLETPAAYGFEETKKPCCKTGLLSAGAL 489

Query: 320 CGTIGTANGKDVFGNACEKPSMYVSWDGVHYAEAANHWVANRIL 363
           C        K      C   S Y+ WDGVH  + A +   N++L
Sbjct: 490 C--------KKSTSKICPNTSSYLFWDGVHPTQRA-YKTINKVL 524


>ZYX_HUMAN (Q15942) Zyxin (Zyxin 2)
          Length = 572

 Score = 33.9 bits (76), Expect = 0.71
 Identities = 14/29 (48%), Positives = 16/29 (54%)

Query: 38  GDSNSDTGGISAAFEPIPPPYGESFPQKP 66
           GD +   G +  AF P PPP  ESFP  P
Sbjct: 80  GDGDDAEGALGGAFPPPPPPIEESFPPAP 108


>RBMC_MACMU (Q8SQ27) RNA-binding protein 12 (RNA binding motif
           protein 12) (SH3/WW domain anchor protein in the
           nucleus) (SWAN)
          Length = 932

 Score = 33.5 bits (75), Expect = 0.92
 Identities = 24/58 (41%), Positives = 27/58 (46%), Gaps = 15/58 (25%)

Query: 16  LCVNSVELKNSPPCAFPAIYNFGDSNSDTGGISAAFEPIPPP------YGESFPQKPS 67
           L V S E  N PP  FP   NFG SN       A   PIPPP      +G++ P  PS
Sbjct: 708 LTVGSKEANNGPPFNFPG--NFGGSN-------AFGPPIPPPGLGGGAFGDARPGMPS 756


>RBMC_HUMAN (Q9NTZ6) RNA-binding protein 12 (RNA binding motif
           protein 12) (SH3/WW domain anchor protein in the
           nucleus) (SWAN) (HRIHFB2091)
          Length = 932

 Score = 33.5 bits (75), Expect = 0.92
 Identities = 24/58 (41%), Positives = 27/58 (46%), Gaps = 15/58 (25%)

Query: 16  LCVNSVELKNSPPCAFPAIYNFGDSNSDTGGISAAFEPIPPP------YGESFPQKPS 67
           L V S E  N PP  FP   NFG SN       A   PIPPP      +G++ P  PS
Sbjct: 708 LTVGSKEANNGPPFNFPG--NFGGSN-------AFGPPIPPPGLGGGAFGDARPGMPS 756


>VF01_VACCV (P24356) Protein F1 (Fragment)
          Length = 207

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 229 LPVNLFYKHNLPAGYLDPYGCVKDQNVMAVEFNKQLKDRVVKLRTELPEAAITYVDLYAA 288
           LP N+ Y+ +     LD     +D  +MAV +    K R+  L  +LP    +Y+D+   
Sbjct: 41  LPENMVYRFDKSTNILDYLSTERDHVMMAVRYYMS-KQRLDDLYRQLPTKTRSYIDIINI 99

Query: 289 KYGLISNTKN 298
               +SN  N
Sbjct: 100 YCDKVSNDYN 109


>VF01_VACCP (P68451) Protein F1 (Fragment)
          Length = 206

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 229 LPVNLFYKHNLPAGYLDPYGCVKDQNVMAVEFNKQLKDRVVKLRTELPEAAITYVDLYAA 288
           LP N+ Y+ +     LD     +D  +MAV +    K R+  L  +LP    +Y+D+   
Sbjct: 41  LPENMVYRFDKSTNILDYLSTERDHVMMAVRYYMS-KQRLDDLYRQLPTKTRSYIDIINI 99

Query: 289 KYGLISNTKN 298
               +SN  N
Sbjct: 100 YCDKVSNDYN 109


>VF01_VACCC (P68450) Protein F1
          Length = 226

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 229 LPVNLFYKHNLPAGYLDPYGCVKDQNVMAVEFNKQLKDRVVKLRTELPEAAITYVDLYAA 288
           LP N+ Y+ +     LD     +D  +MAV +    K R+  L  +LP    +Y+D+   
Sbjct: 41  LPENMVYRFDKSTNILDYLSTERDHVMMAVRYYMS-KQRLDDLYRQLPTKTRSYIDIINI 99

Query: 289 KYGLISNTKN 298
               +SN  N
Sbjct: 100 YCDKVSNDYN 109


>SMR5_MOUSE (Q91ZW3) SWI/SNF related matrix associated actin
          dependent regulator of chromatin, subfamily A member 5
          (EC 3.6.1.-) (Sucrose nonfermenting protein 2 homolog)
          (mSnf2h)
          Length = 1051

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 15/27 (55%), Positives = 17/27 (62%)

Query: 47 ISAAFEPIPPPYGESFPQKPSARDCDG 73
          +S+A EP PPP  ES P KPSA    G
Sbjct: 1  MSSAVEPPPPPPPESAPSKPSAAGAGG 27


>ABG2_LACLC (Q48726) Abortive phage resistance protein abiGii
          Length = 397

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 19/58 (32%), Positives = 29/58 (49%), Gaps = 2/58 (3%)

Query: 250 VKDQNVMAVEFNKQLKDRVVKLRTELPEAAITYVDLYAAKYGL-ISNTKNEGFVDPLK 306
           +KD N++ + F   + DRVVK ++E P    T+ D    K    I+  KN G   P +
Sbjct: 260 IKDVNIIKILFESYINDRVVKFKSE-PSLKFTFDDSSNFKESFPITGKKNMGIFVPFQ 316


>MYH7_MESAU (P13540) Myosin heavy chain, cardiac muscle beta isoform
            (MyHC-beta)
          Length = 1934

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 129  SLDMQFVQFKQFKARTKQLYQEAKTALERSK---LPVPEEFSKALYTFDIGQNDLSVGFR 185
            +LD +   F +  A  KQ Y+E+++ LE S+     +  E  K    ++     L   F+
Sbjct: 1440 ALDKKQRNFDKILAEWKQKYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLET-FK 1498

Query: 186  MMNFDQMRESMPDIVNQLASAVKNIYEL 213
              N   ++E + D+  QL S  K+I+EL
Sbjct: 1499 REN-KNLQEEISDLTEQLGSTGKSIHEL 1525


>MYH7_HUMAN (P12883) Myosin heavy chain, cardiac muscle beta isoform
            (MyHC-beta)
          Length = 1935

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 129  SLDMQFVQFKQFKARTKQLYQEAKTALERSK---LPVPEEFSKALYTFDIGQNDLSVGFR 185
            +LD +   F +  A  KQ Y+E+++ LE S+     +  E  K    ++     L   F+
Sbjct: 1441 ALDKKQRNFDKILAEWKQKYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLET-FK 1499

Query: 186  MMNFDQMRESMPDIVNQLASAVKNIYEL 213
              N   ++E + D+  QL S+ K I+EL
Sbjct: 1500 REN-KNLQEEISDLTEQLGSSGKTIHEL 1526


>MYH6_RAT (P02563) Myosin heavy chain, cardiac muscle alpha isoform
            (MyHC-alpha)
          Length = 1938

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 5/88 (5%)

Query: 129  SLDMQFVQFKQFKARTKQLYQEAKTALERSK---LPVPEEFSKALYTFDIGQNDLSVGFR 185
            +LD +   F +  A  KQ Y+E+++ LE S+     +  E  K    ++     L   F+
Sbjct: 1442 ALDKKQRNFDKILAEWKQKYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLET-FK 1500

Query: 186  MMNFDQMRESMPDIVNQLASAVKNIYEL 213
              N   ++E + D+  QL    KN++EL
Sbjct: 1501 REN-KNLQEEISDLTEQLGEGGKNVHEL 1527


>MYH6_MOUSE (Q02566) Myosin heavy chain, cardiac muscle alpha isoform
            (MyHC-alpha)
          Length = 1938

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 5/88 (5%)

Query: 129  SLDMQFVQFKQFKARTKQLYQEAKTALERSK---LPVPEEFSKALYTFDIGQNDLSVGFR 185
            +LD +   F +  A  KQ Y+E+++ LE S+     +  E  K    ++     L   F+
Sbjct: 1443 ALDKKQRNFDKILAEWKQKYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLET-FK 1501

Query: 186  MMNFDQMRESMPDIVNQLASAVKNIYEL 213
              N   ++E + D+  QL    KN++EL
Sbjct: 1502 REN-KNLQEEISDLTEQLGEGGKNVHEL 1528


>MYH6_MESAU (P13539) Myosin heavy chain, cardiac muscle alpha isoform
            (MyHC-alpha)
          Length = 1939

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 5/88 (5%)

Query: 129  SLDMQFVQFKQFKARTKQLYQEAKTALERSK---LPVPEEFSKALYTFDIGQNDLSVGFR 185
            +LD +   F +  A  KQ Y+E+++ LE S+     +  E  K    ++     L   F+
Sbjct: 1443 ALDKKQRNFDKILAEWKQKYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLET-FK 1501

Query: 186  MMNFDQMRESMPDIVNQLASAVKNIYEL 213
              N   ++E + D+  QL    KN++EL
Sbjct: 1502 REN-KNLQEEISDLTEQLGEGGKNVHEL 1528


>MYH6_HUMAN (P13533) Myosin heavy chain, cardiac muscle alpha isoform
            (MyHC-alpha)
          Length = 1939

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 5/88 (5%)

Query: 129  SLDMQFVQFKQFKARTKQLYQEAKTALERSK---LPVPEEFSKALYTFDIGQNDLSVGFR 185
            +LD +   F +  A  KQ Y+E+++ LE S+     +  E  K    ++     L   F+
Sbjct: 1443 ALDKKQRNFDKILAEWKQKYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLET-FK 1501

Query: 186  MMNFDQMRESMPDIVNQLASAVKNIYEL 213
              N   ++E + D+  QL    KN++EL
Sbjct: 1502 REN-KNLQEEISDLTEQLGEGGKNVHEL 1528


>P115_MYCGE (P47540) P115 protein homolog
          Length = 982

 Score = 30.8 bits (68), Expect = 6.0
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)

Query: 234 FYKHNLPAGYLDPYGCVKDQNVMAVEFN-KQLKDRVVKLRTELPE--AAITYVDLYAAKY 290
           F K NL  GYL       +QN+  +E N ++LK  + +L  +L E    + Y +L  AK+
Sbjct: 563 FEKTNLSDGYLSSASLDNEQNINKLENNERELKKELTELEVKLDEMNRKLKYEELLQAKF 622


>NOE3_RAT (P63057) Noelin 3 precursor (Olfactomedin 3) (Optimedin)
          Length = 478

 Score = 30.8 bits (68), Expect = 6.0
 Identities = 27/104 (25%), Positives = 44/104 (41%), Gaps = 6/104 (5%)

Query: 67  SARDCDGRLIVDFIAEKLNLPYLSAYLNSLGTNYRHGANFATGGSTIRRQNETIFQYGIS 126
           SA+D DGR I   +A + NL    A    L        N +     +  + +  FQY   
Sbjct: 57  SAQDPDGRCICTVVAPEQNLCSRDAKSRQLRQLLEKVQNMSQSIEVLNLRTQRDFQY--- 113

Query: 127 PFSLDMQFVQFKQFKARTKQLYQEAKTALERSKLPVPEEFSKAL 170
              L M+  Q K  KA+ +Q+  + KT + +    + E+  + L
Sbjct: 114 --VLKME-TQMKGLKAKFRQIEDDRKTLMTKHFQELKEKMDELL 154


>NOE3_MOUSE (P63056) Noelin 3 precursor (Olfactomedin 3) (Optimedin)
          Length = 478

 Score = 30.8 bits (68), Expect = 6.0
 Identities = 27/104 (25%), Positives = 44/104 (41%), Gaps = 6/104 (5%)

Query: 67  SARDCDGRLIVDFIAEKLNLPYLSAYLNSLGTNYRHGANFATGGSTIRRQNETIFQYGIS 126
           SA+D DGR I   +A + NL    A    L        N +     +  + +  FQY   
Sbjct: 57  SAQDPDGRCICTVVAPEQNLCSRDAKSRQLRQLLEKVQNMSQSIEVLNLRTQRDFQY--- 113

Query: 127 PFSLDMQFVQFKQFKARTKQLYQEAKTALERSKLPVPEEFSKAL 170
              L M+  Q K  KA+ +Q+  + KT + +    + E+  + L
Sbjct: 114 --VLKME-TQMKGLKAKFRQIEDDRKTLMTKHFQELKEKMDELL 154


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.321    0.138    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,268,911
Number of Sequences: 164201
Number of extensions: 2127973
Number of successful extensions: 4720
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 4687
Number of HSP's gapped (non-prelim): 37
length of query: 381
length of database: 59,974,054
effective HSP length: 112
effective length of query: 269
effective length of database: 41,583,542
effective search space: 11185972798
effective search space used: 11185972798
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)


Lotus: description of TM0001.6