BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0590c.9
(1706 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris] 1368 0.0
ref|XP_463537.1| putative polyprotein [Oryza sativa (japonica cu... 1109 0.0
gb|AAF79618.1| F5M15.26 [Arabidopsis thaliana] gi|25402907|pir||... 1060 0.0
gb|AAD27571.1| polyprotein [Sorghum bicolor] gi|4378066|gb|AAD19... 1021 0.0
ref|XP_476195.1| putative polyprotein [Oryza sativa (japonica cu... 947 0.0
gb|AAL76007.1| prpol [Zea mays] 929 0.0
ref|XP_474675.1| OSJNBa0027O01.4 [Oryza sativa (japonica cultiva... 921 0.0
ref|NP_918169.1| putative gag-pol polyprotein [Oryza sativa (jap... 920 0.0
gb|AAP52499.1| putative gag-pol precursor [Oryza sativa (japonic... 919 0.0
ref|XP_475035.1| OSJNBa0042F21.5 [Oryza sativa (japonica cultiva... 918 0.0
ref|XP_473950.1| OSJNBa0053K19.16 [Oryza sativa (japonica cultiv... 917 0.0
gb|AAD11615.1| prpol [Zea mays] gi|7489805|pir||T14595 polyprote... 917 0.0
gb|AAP53095.1| putative retroelement [Oryza sativa (japonica cul... 914 0.0
dbj|BAD18986.1| GAG-POL precursor [Vitis vinifera] 912 0.0
ref|XP_470757.1| putative gag-pol precursor [Oryza sativa] gi|18... 909 0.0
gb|AAP54912.1| gag-pol precursor [Oryza sativa (japonica cultiva... 905 0.0
ref|XP_474845.1| OSJNBa0035O13.3 [Oryza sativa (japonica cultiva... 902 0.0
ref|XP_475120.1| putative polyprotein [Oryza sativa (japonica cu... 899 0.0
emb|CAE02238.2| OSJNBb0054B09.2 [Oryza sativa (japonica cultivar... 898 0.0
gb|AAP52913.1| putative retroelement [Oryza sativa (japonica cul... 836 0.0
>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1859
Score = 1368 bits (3542), Expect = 0.0
Identities = 722/1723 (41%), Positives = 1047/1723 (59%), Gaps = 131/1723 (7%)
Query: 41 PFSEDVENVAIPDNMKTLVLDSYSGDSDPKDHLLYFNTKMVIIAASDAVKCRMFPSTFKS 100
PF++D+ +PD + L ++ Y G +DP +HL F T+M + V C++FP++ +
Sbjct: 211 PFTDDIIATPLPDKWRGLTINLYDGSTDPDEHLNIFRTQMTLYTTDRTVWCKVFPTSLRE 270
Query: 101 TAMAWFTTLPRGSISNFRDFSSKFLVQFSANKNQPVTINDLYNIRQQEGESLKEYMARYS 160
+ WF+ LP SI++F KF Q++ ++ + L N++Q+ GESL+ +M R+S
Sbjct: 271 GPLGWFSDLPPNSIASFDALELKFTTQYATSRPHRTSSMSLLNVKQERGESLRTFMNRFS 330
Query: 161 AASVKVEDEEPRACALAFKNGLLPGGLNSKLTRKPARSMGEMRARASTYILDEEDDAFKR 220
+ + + P + +LPG L ++P +M E+R RA+ ++ EE + R
Sbjct: 331 KVCMNIRNLNPEIAMHHLVSAILPGRFTESLIKRPPCNMDELRTRATKFMQIEEHIDYHR 390
Query: 221 KRAKLEKGDTSPKRVKKDRSGEDKGDGKQQRPGKGKSVFKPTKEQLYPRRDDYEQRRPWQ 280
K E D S K R D ++ RP +G PR +Y +
Sbjct: 391 K-TYAENTDNS----KGIRPPTIPTDRERHRPNRG------------PRFHNYTPLIVPR 433
Query: 281 SKSHRQREETDMVMNTDVSDMLRGASDANLVDEPEAPKYQPRDANPKKWCEFHRSAGHDT 340
K D + ++ LR P P +A+ K C++HR+ GH T
Sbjct: 434 GK------VLDEALQIELIPTLR-------------PSQTPPNADTSKRCQYHRNYGHTT 474
Query: 341 DDCRTLQREIDKLIRAGY------------------------QGNRQGQWRNGGDQNKAH 376
+ C+ L+ +I++L++AG+ G R + R+ ++
Sbjct: 475 EGCQALKDKIEELVQAGHLRKFVKTTITAPRSPQRDHDPRERSGRRDDRTRDNHYRSSRR 534
Query: 377 KREE----------ERADTKGKKKQESAAIATKGADDTFAQHSGPPVGTINTIAGGFGGG 426
KR E E + + + KQ+ + A G P IN IAGGF GG
Sbjct: 535 KRSESPIRRTRPKSESPERRSRTKQKVRTVINTIAGPV---SLGQPPQEINYIAGGFAGG 591
Query: 427 GDTHAARKRHVRAVNSVHEVAFGFVH--PDITISMADFEGIKPHKDDPIVVQLRMNSFNV 484
G +++ARK+H+RA+ SVH P IT + DF I P +DDP+V+ + ++ F +
Sbjct: 592 GCSNSARKKHLRAIQSVHSTPTQRRPHIPPITFTDEDFTAIDPSQDDPMVITVEIDKFAI 651
Query: 485 RRVLLDQGSSADIIYGDAFDKLGLTDNDLTPYAGTLVGFAGEQVMVRGYIDLDTIFGEDE 544
+VL+DQGSS DI+Y + F K+ + + ++ PY +VGF+ E+V +G+IDL T FG+D
Sbjct: 652 AKVLVDQGSSVDILYWETFKKMKIPEAEIQPYNEQIVGFSRERVDTKGFIDLYTTFGDDY 711
Query: 545 CARVLKVRYLVLQVVASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGKLKVDQKMA 604
++ + +RYL++ SYN+++GR ++NRL A++ST HLA+K+P +G + + +DQK A
Sbjct: 712 LSKTINIRYLLVNANTSYNILLGRPSINRLKAIVSTPHLAMKFPSVNGDIATVHIDQKTA 771
Query: 605 RECYNNCLNFYGKKSALVGHRCYEIEASDENLDPRGEGRVNRP--------TPIEETKAL 656
RECY L + E + + R GR +R P + +
Sbjct: 772 RECYVASLKVEPTRRLYTTSAERTTERRGRSTERRSRGRESRRHLVALVDLDPRLDDPRM 831
Query: 657 KFG-----------DRTLKIGTRLTEEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICH 705
+ G DR +GT L + + K L +N DLFAW+ DMPG+ + I H
Sbjct: 832 EAGEDLQPIFLRDKDRKTYMGTSLKPDDRETIGKTLTKNADLFAWTAADMPGVKSDVITH 891
Query: 706 RLALNPSVKPVSQLRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGK 765
RL++ +P++Q +R+LG ++ KA ++E DKL+ A FI++ Y TWLANVVMVKK NGK
Sbjct: 892 RLSVYTEARPIAQKKRKLGEERRKAAREETDKLIQAGFIQKAHYTTWLANVVMVKKTNGK 951
Query: 766 WRMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTA 825
WRMCVDYTDLNKACPKDSYPLP+ID LVDGA+G+++LS +DAYSGY+QI+M+ D +KTA
Sbjct: 952 WRMCVDYTDLNKACPKDSYPLPTIDRLVDGAAGHQILSFLDAYSGYNQIQMYHRDREKTA 1011
Query: 826 FMTARVNYCYRTMPFGLKNAGATYQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQD 885
F T N+ Y MPFGLKNAGATYQRLMD VF +GRN+EVYVDD++VKS H D
Sbjct: 1012 FRTDSDNFFYEVMPFGLKNAGATYQRLMDHVFHDMIGRNVEVYVDDIVVKSDSCEQHVSD 1071
Query: 886 LEEAFGEIRKHSMRLNPEKCSFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKE 945
L+E F +R++ MRLNPEKC+FGV+GGKFLGFM+T RGIE NPEKCKAI +M+SP +KE
Sbjct: 1072 LKEVFQALRQYRMRLNPEKCAFGVEGGKFLGFMLTHRGIEANPEKCKAITEMRSPKGLKE 1131
Query: 946 VQRLTGRIAALSRFLPQSGDRSFPFFKCLRKNVAFEWTAECEEAFVRLKELLSSPPILSK 1005
+QRL R+ +LSRF+P+ +R+ P K L+K FEWT ECE+ F +LK L+SPP++ K
Sbjct: 1132 IQRLVSRLTSLSRFVPKLAERTRPIIKLLKKTSKFEWTDECEQNFQQLKAFLASPPVIQK 1191
Query: 1006 PIQGHPLHLYFAVSDSALSSVMLQEIDGEHRIVYFVSHTLQGAEVRYQKIEKAALAVLVT 1065
P P+ +Y AVS+ A+SS ++QEI E R VYFVS L AE RYQ +EK A A+++T
Sbjct: 1192 PNAREPIVVYLAVSNEAVSSALVQEIKAEERPVYFVSRVLHDAETRYQMVEKVAFALVIT 1251
Query: 1066 ARRLRPYFQSFPVKVRTDLPLRQVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQSLA 1125
ARR+R YFQ+ V VRT+ P+ ++L KPDL+GR++ W+VELSE+ ++Y RG + +Q+LA
Sbjct: 1252 ARRMRMYFQNHKVIVRTNYPIMKILTKPDLAGRMIGWAVELSEFHIEYQPRGAIKSQALA 1311
Query: 1126 DFVVELTPDRFERVDTQWTLFVDGSSNSSGSGAGVTLEGPGELVLEQSLKFEFKATNNQA 1185
DF ELTP ER +WTL+VDGSSNS SGAGV LEGPGE+V+EQ++KFEFK +NNQA
Sbjct: 1312 DFTAELTPYLTERT-PRWTLYVDGSSNSRSSGAGVVLEGPGEIVVEQAMKFEFKTSNNQA 1370
Query: 1186 EYEALIAGLKLAREVKIRSLLIRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQE 1245
EYEA+IAGL LA E+++ ++ ++DS+LV Q+ G ++V++ L +Y V+ L+ F+E
Sbjct: 1371 EYEAIIAGLHLAIELEVTNITCKSDSRLVVGQLTGEYEVRETLLQQYFHFVKNLLNRFKE 1430
Query: 1246 VVVEYVPRAENQRADALAKLASTRKPGNNKSVIQETLAYPSIEGELMACVNRGRTWMDPI 1305
+ ++V R N RADAL++LA+ +K G ++S I TLA PS+ E + WM PI
Sbjct: 1431 ISFQHVRRENNTRADALSRLATLKKKGAHRSAIHVTLAKPSVGTEECMATDTQPNWMTPI 1490
Query: 1306 ISILAGDPAEVEQCTKEQQREASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEG 1365
L + K + +A+ Y LI LYRRG+S PLLKC+ PE+ +M+E+HEG
Sbjct: 1491 KQYLTDGVCD-PHLEKTMKLQAARYILIGEDLYRRGYSRPLLKCLGPEQVTYVMTELHEG 1549
Query: 1366 VCASHIGGRSLACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPW 1425
+C +H G R+++ K+LRAG+YWPTL+ DC ++
Sbjct: 1550 ICGTHSGARTMSAKILRAGYYWPTLQGDCTEY---------------------------- 1581
Query: 1426 PFAMWGVDLVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFG 1485
G+D++GPF + Q KF+LV +DYFTKWIEAEPL IT+ + +F WK IVCRFG
Sbjct: 1582 -----GMDIIGPFTPGKGQCKFLLVGIDYFTKWIEAEPLTAITARNVQSFVWKNIVCRFG 1636
Query: 1486 IPRAIVSDNGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRRRLAE 1545
+P+ I++DNG QF+ EF +++ I+ +SVEHPQTNGQ E+AN+VIL L++RL
Sbjct: 1637 LPQIIITDNGRQFTDRGLAEFYEKLHIKHITSSVEHPQTNGQAEAANKVILNELKKRLGP 1696
Query: 1546 AKGAWLDELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEENQA 1605
+KG W +EL VLW+Y T QSTT+ETP+ +TYG +AM+PVEI + R + + N+
Sbjct: 1697 SKGNWTEELLEVLWAYRCTPQSTTQETPYSLTYGTEAMIPVEIGEPSLRRQTLDLDLNKE 1756
Query: 1606 NMAVELDLLSETRDEAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVLKWRSGA--PGNKL 1663
++ V LDL++E RD+ IRE A K R A ++NS+V+ R Q GDLV + RS A G K
Sbjct: 1757 SLLVGLDLINELRDKCKIREEACKIRAARRYNSKVKPRSYQKGDLVWRMRSDARKDGGKF 1816
Query: 1664 TPNWEGPYRIVKVLGNGAYHLEELDGRRLPRSFNGLSLRYFYS 1706
+ NWEGP+RI GAY+LE L G+ PR++N L+++YS
Sbjct: 1817 SSNWEGPFRISNTATGGAYYLEYLSGKSAPRTWNATHLKFYYS 1859
>ref|XP_463537.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 2001
Score = 1109 bits (2869), Expect = 0.0
Identities = 621/1707 (36%), Positives = 958/1707 (55%), Gaps = 88/1707 (5%)
Query: 41 PFSEDVENVAIPDNMKTLVLDSYSGDSDPKDHLLYFNTKMVIIAASDAVKCRMFPSTFKS 100
P S++++ P N K + Y GD+DP ++L + T + D K ++ P+ +
Sbjct: 342 PLSQNLQMAPWPINFKLSNITKYKGDTDPNEYLRVYETAVEAAGGDDTTKAKILPTMLEG 401
Query: 101 TAMAWFTTLPRGSISNFRDFSSKFLVQFSANKNQPVTINDLYNIRQQEGESLKEYMARYS 160
A++W+TT+P +I ++ F F +P +DLY ++Q GE+L+ ++ ++S
Sbjct: 402 VALSWYTTIPPMTIYSWEHMRDTFRAGFIGAYEEPKEADDLYAMKQLPGETLRSFIVKFS 461
Query: 161 AASVKVEDEEPRACALAFKNGLLPGGLNSKLTRKPARSMGEMRARASTYILDEEDDA--- 217
++ + A K LLPG L L R ++ ++ R ++ EED+
Sbjct: 462 RVRCQIRHVDDEMLIAAAKRALLPGPLRFDLARNRPKTTKDLFERMESFARGEEDELRVQ 521
Query: 218 ------FKRKRAKL--------EKGDTSPKRVKK---DRSGEDK------GDGKQQRPGK 254
+K++K +KG+ + K KK D + K GDG K
Sbjct: 522 EEEAVLLGKKQSKNKQISQGEEQKGENTGKPWKKFKYDYRQDQKKQVNFIGDGSNNEREK 581
Query: 255 GKSVFKPTKEQLYPRRDDYEQRRPWQSKSHRQREETDMVMNTDVSDMLRGASDANLVDEP 314
GK + T+ R+++ Q + + N + D +
Sbjct: 582 GKHQWDNTRRG----RNNWGQSGKGRGQWWNSGRGRGRWWNNERGKGRENKPDQTKFCQT 637
Query: 315 EAPKYQPRDANPKKWCEFHRSAGHDTDDCRTLQREIDKLIRAGYQGNRQGQWRNGGDQNK 374
P + K+C H GH T++CR + ++K + N+
Sbjct: 638 HGPGGHSTEECYSKFCHIHGPGGHSTEECRQMTHLLEKHV------------------NR 679
Query: 375 AHKREEERADTKGKKKQESAAIATKGADDTFAQHSGPPVGTINTIAGGFGGGGDTHAARK 434
+ E D +G+ E+ + A + P IN I GG G ++ RK
Sbjct: 680 YENKYEGARDQRGQNAIEAPQVMKIEAIEEV------PKRVINAITGGSSLGVESKRQRK 733
Query: 435 RHVRAVNSVHEVAFG----FVHPDITISMADFEGIKPHKDDPIVVQLRMNSFNVRRVLLD 490
+VR VN V + I+ D EGI DP+VV + + V+RVL+D
Sbjct: 734 AYVRQVNHVGTSYQSNPPVYSKTVISFGPEDAEGILFPHQDPLVVSVEIAQCEVQRVLID 793
Query: 491 QGSSADIIYGDAFDKLGLTDNDLTPYAGTLVGFAGEQVMVRGYIDLDTIFGEDECARVLK 550
GSSAD+++ DAF K+ + ++ LT L GF G+QV G I L +FG+ R +
Sbjct: 794 GGSSADVLFYDAFKKMQIPEDRLTNAGVPLQGFGGQQVHAIGKISLQVVFGKGTNVRKEE 853
Query: 551 VRYLVLQVVASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGKLKVDQKMARECYNN 610
+ + V+ + YN I+GR+T+N A+I ++ +K P G + ++ +Q AR+
Sbjct: 854 IVFDVVDMPYQYNAILGRSTINIFEAIIHHNYICMKLPGLRGVI-TVRGEQLAARK---- 908
Query: 611 CLNFYGKKSALVGHRCYEIEASDENLDPRGEG-RVNRPTPIEETKALKFGDRT----LKI 665
G S H D+ +GE ++ +P P +TK ++ + + I
Sbjct: 909 -YELQGTPSVKGVH------VVDQK---QGEYIKIQKPIPEGKTKKVQLDEHNPGKFILI 958
Query: 666 GTRLTEEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHRLALNPSVKPVSQLRRRLGG 725
G L + E + K++ EN+ +FAWS ++ G+D + I H LA+ KP Q RR+
Sbjct: 959 GENLEKHIEEEILKVVKENMAVFAWSPDELQGVDRSLIEHNLAIKSGYKPKKQKLRRMST 1018
Query: 726 DKGKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKWRMCVDYTDLNKACPKDSYP 785
D+ +A + E++KLL A+ IREV +P WLAN V+VKKANGKWRMC+D+TDLNKACPKD +P
Sbjct: 1019 DRQQAAKIELEKLLKAKVIREVMHPEWLANPVLVKKANGKWRMCIDFTDLNKACPKDDFP 1078
Query: 786 LPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMPFGLKNA 845
LP ID LVD +G EL+S +DAYSGYHQ+ M DE+KT+F+T YC+ MPFGLKNA
Sbjct: 1079 LPRIDQLVDATAGCELMSFLDAYSGYHQVFMVKEDEEKTSFITPFGTYCFIRMPFGLKNA 1138
Query: 846 GATYQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMRLNPEKC 905
GAT+ RL+ +V A Q+GRN+E Y+DD++VKS + H +DL+E F +RK S++LNPEKC
Sbjct: 1139 GATFARLIGKVLAKQLGRNVEAYIDDIVVKSKQAFTHGKDLQETFENLRKCSVKLNPEKC 1198
Query: 906 SFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRFLPQSGD 965
FGV+ GK LGF+++ RGIE NP+K AI QM+ P N +EVQRLTGR+A+LSRFL +S +
Sbjct: 1199 VFGVRAGKLLGFLVSKRGIEANPDKIAAIHQMEPPKNTREVQRLTGRMASLSRFLSKSAE 1258
Query: 966 RSFPFFKCLRKNVAFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSDSALSS 1025
+ PFFK LR FEWTAEC++AF LK+ L P L+ P +G PL +Y A + + +S+
Sbjct: 1259 KGLPFFKTLRGANTFEWTAECQQAFDDLKKYLHEMPTLASPPKGQPLLMYVAATPATVSA 1318
Query: 1026 VMLQEIDGEHRIVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPYFQSFPVKVRTDLP 1085
V++QE + VYFVS LQG + RY ++EK A+++ +R+LR YF S + + + P
Sbjct: 1319 VLVQEEENRQVPVYFVSEALQGPKTRYSEVEKLIYAIVMASRKLRHYFLSHDITIPSAYP 1378
Query: 1086 LRQVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELTPDRFER---VDTQ 1142
+ +VL +++GR+ W++EL + L+Y R + +Q LADFV E TP+ E+ V
Sbjct: 1379 IGEVLTNKEVAGRIAKWAMELLPFDLKYISRTAIKSQVLADFVAEWTPNEVEQQEEVKKP 1438
Query: 1143 WTLFVDGSSNSSGSGAGVTLEGPGELVLEQSLKFEFKATNNQAEYEALIAGLKLAREVKI 1202
W +F DG+ N++G+GA ++ P + L+ S++ F +TNN AEYE ++ ++ AR +
Sbjct: 1439 WIVFSDGACNAAGAGAAAVVKTPMKQTLKYSVQLVFPSTNNTAEYEGVLLAMRKARALGA 1498
Query: 1203 RSLLIRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVVEYVPRAENQRADAL 1262
R L+++TDS+LV +F+ K+ + KYLE R F + V+ + R EN AD L
Sbjct: 1499 RRLIVKTDSKLVAGHFSKSFEAKEETMAKYLEEARLNEKHFLGITVKAITREENGEADEL 1558
Query: 1263 AKLASTRKPGNNKSVIQETLAYPSIEGELMACVNRGRTWMDPIIS-ILAGDPAEVEQCTK 1321
AK A+T +P N + + PS E + +AC+ R W +PI+ +++ E E+ K
Sbjct: 1559 AKAAATGQPLENS--FFDIITQPSYEKKEVACIQREGDWREPILKYLVSAQLPEKEEEAK 1616
Query: 1322 EQQREASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVCASHIGGRSLACKVL 1381
Q + Y +++G LY+ G + PLLKCV+ E+ ++ E+HEG+C +H S+A KV+
Sbjct: 1617 RIQLMSKKYKVVEGQLYKSGVTAPLLKCVTREEGMKMVVEIHEGLCGAHQAPWSVASKVI 1676
Query: 1382 RAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPFAMWGVDLVGPFPTA 1441
R G YWPT+ KD ++K CK CQ F ++KAPPKEL + WPF WG+D+VGP P A
Sbjct: 1677 RQGIYWPTIMKDTEKYIKTCKACQKFGPMTKAPPKELQPIPPVWPFYRWGIDIVGPLPRA 1736
Query: 1442 RAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFGIPRAIVSDNGTQFSSS 1501
+ ++F++VA++YF++WIEAE +A+ITSA + F WK I+CRFGIP+ IV DNG QF S
Sbjct: 1737 KGDLRFVIVAIEYFSRWIEAEAVARITSAAVQKFVWKNIICRFGIPKEIVCDNGKQFESG 1796
Query: 1502 QTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRRRL-AEAKGAWLDELPAVLWS 1560
+ ++ CK + +Q+ FASV HPQTNG VE AN I+ +++RL AKG W ++L +VLW+
Sbjct: 1797 KFQDMCKGLNLQINFASVGHPQTNGVVERANGKIMEAIKKRLEGSAKGKWPEDLLSVLWA 1856
Query: 1561 YNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEENQANMAVELDLLSETRDE 1620
TT +T TPFR+ YG +AM P E+ + R F+++++ + L++L E R E
Sbjct: 1857 LRTTVVRSTGMTPFRLVYGDEAMTPSEVGAHS--PRMIFDQKDEEGREITLEMLDEIRVE 1914
Query: 1621 AHIRETAMKQRVAAKFNSRVRVRDMQVGDLVL-KWRSGAPGNKLTPNWEGPYRIVKVLGN 1679
A + + + + +N +V+ R ++ GDLVL K + KL WEGP+ + K
Sbjct: 1915 ALEKMASYTEGTKSYYNQKVKTRPIEEGDLVLKKVLNEVAVGKLESKWEGPFIVKKKTET 1974
Query: 1680 GAYHLEELDGRRLPRSFNGLSLRYFYS 1706
GA+ L LDG L ++N +SL+ FY+
Sbjct: 1975 GAFKLAYLDGEELKHTWNAVSLKKFYA 2001
>gb|AAF79618.1| F5M15.26 [Arabidopsis thaliana] gi|25402907|pir||H86337 protein
F5M15.26 [imported] - Arabidopsis thaliana
Length = 1838
Score = 1060 bits (2740), Expect = 0.0
Identities = 653/1722 (37%), Positives = 934/1722 (53%), Gaps = 144/1722 (8%)
Query: 41 PFSEDVENVAIPDNMKTLVLDSYSGDSDPKDHLLYFNTKM----VIIAASDAVKCRMFPS 96
PF+ + NV+I K + L+SY+G +DPK+ L FN + + I DA +C++F
Sbjct: 203 PFTRRITNVSIRGAQK-IKLESYNGRNDPKEFLTSFNVAINRAELTIDNFDAGRCQIFIE 261
Query: 97 TFKSTAMAWFTTLPRGSISNFRDFSSKFLVQFSANKNQPVTINDLYNIRQQEGESLKEYM 156
A WF+ L SI +F +S FL ++ + DL++I Q ESL+ ++
Sbjct: 262 HLTGPAHNWFSRLKPNSIDSFHQLTSSFLKHYAPLIENQTSNADLWSISQGAKESLRSFV 321
Query: 157 ARYS--AASVKVEDEEPRACALAFKNGL-LPGGLNSKLTRKPARSMGEMRARASTYILDE 213
R+ ++ V DE A +A +N + +T ++ + RAS +I E
Sbjct: 322 DRFKLVVTNITVPDE---AAIVALRNAVWYDSRFRDDITLHAPSTLEDALHRASRFIELE 378
Query: 214 EDDAFKRKRAKLEKGDTSPKRVKKDRSGEDKGDGKQQRPGKGKSVFKPTKEQLYPRRDDY 273
E+ ++ K V +D + +Q + KPT + D
Sbjct: 379 EEKLILARKHNSTKTPACKDAVVIKVGPDDSNEPRQHLDRNPSAGRKPTSFLVSTETPD- 437
Query: 274 EQRRPWQSKSHRQREETDMVMNTDVSDMLRGASDANLVDEPEA-PKYQPRDANPKKWCEF 332
+PW N + D D P A P Y CE+
Sbjct: 438 --AKPW---------------NKYIRD----------ADSPAAGPMY----------CEY 460
Query: 333 HRSAGHDTDDCRTLQREIDKLIRAGYQ-GNRQGQWRNGGDQNKAHKREEERA------DT 385
H+S H T++CR LQ L+ A Y+ G + NK +R E A T
Sbjct: 461 HKSRAHSTENCRFLQG----LLMAKYKSGGITIECDRPPINNKNQRRNETTARQYLNDQT 516
Query: 386 KGKKKQESAAIATKGADDTFA--QHSGPPVGT-------INTIAGGFGGGGDTHAARKRH 436
K E I + ADD A Q +G + ++ I GG D+ + K++
Sbjct: 517 KPPTPAEQGIITS--ADDPAAKRQRNGKAIAAEPVVVRQVHVIMGGLQNCSDSVRSIKQY 574
Query: 437 VRAVNSVHEVAFGFV-----HPD----ITISMADFEGIKPHKDDPIVVQLRMNSFNVRRV 487
+ V VA+ +P+ I+ + D EG+ +DP+VV+L ++ V RV
Sbjct: 575 RKKAEMV--VAWPSSTSTTRNPNQSAPISFTDVDLEGLDTPHNDPLVVELIISDSRVTRV 632
Query: 488 LLDQGSSADIIYGDAFDKLGLTDNDLTPYAGTLVGFAGEQVMVRGYIDLDTIFGEDECAR 547
L+D GSS D+I+ D + +TD + P + L GF G+ VM G I L G
Sbjct: 633 LIDTGSSVDLIFKDVLTAMNITDRQIKPVSKPLAGFDGDFVMTIGTIKLPIFVG----GL 688
Query: 548 VLKVRYLVLQVVASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGKLKVDQKMAREC 607
+ V+++V+ A YNVI+G ++++ A+ ST H VK+P
Sbjct: 689 IAWVKFVVIGKPAVYNVILGTPWIHQMQAIPSTYHQCVKFPT------------------ 730
Query: 608 YNNCLNFYGKKSALVGHRCYEIEASDENLDPRGEGRVNRPTPIEETKALKFGDRTLKIGT 667
+N K A R YE + L ++ P R + +G
Sbjct: 731 HNGIFTLRAPKEAKTPSRSYE----ESELCRTEMVNIDESDPT----------RCVGVGA 776
Query: 668 RLTEEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHRLALNPSVKPVSQLRRRLGGDK 727
++ L LL N FAWS +DM GIDP H L ++P+ KPV Q RR+LG ++
Sbjct: 777 EISPSIRLELIALLKRNSKTFAWSIEDMKGIDPAITAHELNVDPTFKPVKQKRRKLGPER 836
Query: 728 GKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKWRMCVDYTDLNKACPKDSYPLP 787
+AV +EV+KLL A I EVKYP WLAN V+VKK NGKWR+CVDYTDLNKACPKDSYPLP
Sbjct: 837 ARAVNEEVEKLLKAGQIIEVKYPEWLANPVVVKKKNGKWRVCVDYTDLNKACPKDSYPLP 896
Query: 788 SIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMPFGLKNAGA 847
ID LV+ SGN LLS MDA+SGY+QI MH D++KT+F+T R YCY+ M FGLKNAGA
Sbjct: 897 HIDRLVEATSGNGLLSFMDAFSGYNQILMHKDDQEKTSFVTDRGTYCYKVMSFGLKNAGA 956
Query: 848 TYQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMRLNPEKCSF 907
TYQR ++++ A Q+GR +EVY+DDM+VKS++ DH + L + F + + M+LNP KC+F
Sbjct: 957 TYQRFVNKMLADQIGRTVEVYIDDMLVKSLKPEDHVEHLSKCFDVLNTYGMKLNPTKCTF 1016
Query: 908 GVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRFLPQSGDRS 967
GV G+FLG+++T RGIE NP++ +AI ++ SP N +EVQRLTGRIAAL+RF+ +S D+
Sbjct: 1017 GVTSGEFLGYVVTKRGIEANPKQIRAILELPSPRNAREVQRLTGRIAALNRFISRSTDKC 1076
Query: 968 FPFFKCLRKNVAFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSDSALSSVM 1027
PF+ L++ F+W + EEAF +LK+ LS+PPIL KP G L+LY AVSD A+SSV+
Sbjct: 1077 LPFYNLLKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVGETLYLYIAVSDHAVSSVL 1136
Query: 1028 LQEIDGEHRIVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPYFQSFPVKVRTDLPLR 1087
++E GE R +++ S +L AE RY IEKAALAV+ +AR+LRPYFQS + V TD PLR
Sbjct: 1137 VREDRGEQRPIFYTSKSLVEAETRYPVIEKAALAVVTSARKLRPYFQSHTIAVLTDQPLR 1196
Query: 1088 QVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELTPDRFERV-----DTQ 1142
L P SGR+ W+VELSEY + + R + +Q LADF++EL ER +
Sbjct: 1197 VALHSPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLADFLIELPLQSAERAVSGNRGEE 1256
Query: 1143 WTLFVDGSSNSSGSGAGVTLEGPGELVLEQSLKFEFKATNNQAEYEALIAGLKLAREVKI 1202
W+L+VDGSS++ GSG G+ L P VLEQS + F ATNN AEYE LIAGL+LA ++I
Sbjct: 1257 WSLYVDGSSSARGSGIGIRLVSPTAEVLEQSFRLRFVATNNVAEYEVLIAGLRLAAGMQI 1316
Query: 1203 RSLLIRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVVEYVPRAENQRADAL 1262
++ TDSQL+ Q+ G ++ K+ + YL+ V+ + F+ + +PR +N ADAL
Sbjct: 1317 TTIHAFTDSQLIAGQLSGEYEAKNEKMDAYLKIVQLMTKDFENFKLSKIPRGDNAPADAL 1376
Query: 1263 AKLASTRKPGNNKSVIQETLAYPSIEG-ELMACVNRGRT-----------WMDPIISILA 1310
A LA T + + E++ PSI+ + + VN R+ W I L+
Sbjct: 1377 AALALTSDSDLRRIIPVESIDKPSIDSTDAVEIVNTIRSSNAPDPADPTDWRVEIRDYLS 1436
Query: 1311 GDPAEVEQCTKEQQR-EASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVCAS 1369
++ T + R +A+ YTL+ HL + +L C+ + IM E HEG +
Sbjct: 1437 DGTLPSDKWTARRLRIKAAKYTLMKEHLLKVSAFGAMLNCLHGTEINEIMKETHEGAAGN 1496
Query: 1370 HIGGRSLACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPFAM 1429
H GGR+LA K+ + GFYWPT+ DC F +C++CQ A P + L AP+PF
Sbjct: 1497 HSGGRALALKLKKLGFYWPTMISDCKTFTAKCEQCQRHAPTIHQPTELLRAGVAPYPFMR 1556
Query: 1430 WGVDLVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFGIPRA 1489
W +D+VGP P +R Q +FILV DYFTKW+EAE A I + + NF WK I+CR G+P
Sbjct: 1557 WAMDIVGPMPASR-QKRFILVMTDYFTKWVEAESYATIRANDVQNFVWKFIICRHGLPYE 1615
Query: 1490 IVSDNGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRRRLAEAKGA 1549
I++DNG+QF S FC I++ ++ +PQ NGQ E+ N+ IL GL++RL E KGA
Sbjct: 1616 IITDNGSQFISLSFENFCASWKIRLNKSTPRYPQGNGQAEATNKTILSGLKKRLDEKKGA 1675
Query: 1550 WLDELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFE--EENQANM 1607
W DEL VLWSY TT +S T +TPF YG++AM P E+ + R + E N M
Sbjct: 1676 WADELDGVLWSYRTTPRSATDQTPFAHAYGMEAMAPAEVGYSSLRRSMMVKNPELNDRMM 1735
Query: 1608 AVELDLLSETRDEAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVLK--WRSGAPGN--KL 1663
LD L E R+ A R + A +N +V R VGDLVL+ + + A N KL
Sbjct: 1736 LDRLDDLEEIRNAALCRIQNYQLAAAKHYNQKVHNRHFDVGDLVLRKVFENTAEINAGKL 1795
Query: 1664 TPNWEGPYRIVKVLGNGAYHLEELDGRRLPRSFNGLSLRYFY 1705
NWEG Y++ K++ G Y L + G +PR++N + L+ +Y
Sbjct: 1796 GANWEGSYQVSKIVRPGDYELLTMSGTAVPRTWNSMHLKRYY 1837
>gb|AAD27571.1| polyprotein [Sorghum bicolor] gi|4378066|gb|AAD19359.1| polyprotein
[Sorghum bicolor]
Length = 1877
Score = 1021 bits (2640), Expect = 0.0
Identities = 632/1743 (36%), Positives = 904/1743 (51%), Gaps = 103/1743 (5%)
Query: 41 PFSEDVENVAIPDNMKTLVLDSYSGDSDPKDHLLYFNTKMVIIAASDAVKCRMFPSTFKS 100
P SE ++ P K + L +SG +DP+ L+ F + ++ V + F +
Sbjct: 159 PLSEGLQTSPWPTTYKPITLPKFSGKADPRQFLMSFEAAVASAGGNETVMAKSFVIAAEG 218
Query: 101 TAMAWFTTLPRGSISNFRDFSSKFLVQFSANKNQPVTINDLYNIRQQEGESLKEYMARYS 160
A+AW++ L GSI ++ + K L F + +T DL+ RQ +GE+L+EY R+
Sbjct: 219 DALAWYSMLRPGSIYSWENLRDKILANFQGFAVESLTSTDLFQCRQNQGEALREYFQRFV 278
Query: 161 AASVKVEDEEPRACALAFKNGLLPGGLNSKLTRKPARSMGEMRARASTYILDEEDDAFKR 220
+ A GL G + L R+ SM E+ Y + D
Sbjct: 279 QTKARAPGVPKEVAIEAAIKGLRIGPFAAHLAREKPASMHELYHEFEKYCRSDND----- 333
Query: 221 KRAKLEKGDTSPKRVKKDRSGEDKGDGK-QQRPGKGKSVFKPTKEQLYPRRDDYEQRRP- 278
R +LE S KR DR+ + K + ++RP + EQ P+ D E RP
Sbjct: 334 YRKRLED-QNSQKRQSNDRNSQKKDLSRDERRPQREAGGQMMNIEQ--PKNDRPENNRPP 390
Query: 279 ---------------------WQ-SKSHRQREETDMVMNTDVSDMLRGASDANLVDE--- 313
W+ ++S R R++ + R DA E
Sbjct: 391 VEARSSERVPNQAGRGGRNAGWRKNQSQRPRKQYCFFHGEEKGHSTRDCPDAKETQERIK 450
Query: 314 ------PEAPKYQPRDANPKKWCEFHRS--AGHDTDDCRTLQREIDKLIRAGYQGNRQGQ 365
P P QPR+ N F+ S G LQ + + Y +
Sbjct: 451 SRSAPQPPIPVAQPREVNHTFPQTFYHSYVGGSSQQHPAPLQ---PSALASAYYPSFLPA 507
Query: 366 WRNG---GDQN---------KAHKREEERADTKGKKKQESAAIATKGA------DDTFAQ 407
WR D N H E Q A D+
Sbjct: 508 WRPAQQTADHNLPPNYVPPRPPHITYIETQSLPPPPNQLQLLQAPPPPKTEPHPDNQIGP 567
Query: 408 HSG-PPVGTINTIAGGFGGGGDTHAARKRHVRAVNSVHEVA----FGFVHPDITISMADF 462
H+ P +G I IAGG T +K H+R VN+V + IT + D
Sbjct: 568 HTPLPTIGMILPIAGGSSMEFQTKKQKKDHLRLVNNVAVQGPVRCTDWSRTPITFTEEDL 627
Query: 463 EGIKPHKDDPIVVQLRMNSFNVRRVLLDQGSSADIIYGDAFDKLGLTDNDLTPYAGTLVG 522
D +V+ + + V R+L+D GSSADII+ FD++ L+ + L P L+G
Sbjct: 628 RLESYPHTDALVITTNVAGWGVSRILVDSGSSADIIFAGTFDQMKLSRSQLQPSESPLIG 687
Query: 523 FAGEQVMVRGYIDLDTIFGEDECARVLKVRYLVLQVVASYNVIIGRNTLNRLCAVISTAH 582
F G+Q+ G + L FG E AR V + V+ + YN I GR LN+ A +
Sbjct: 688 FGGKQIHALGKVALPVSFGTTENARTEYVTFDVVDLHYPYNAIFGRGFLNKFNAAAHMGY 747
Query: 583 LAVKYPLSSGKV---GKLKVDQKMARECYNNCLNFYGKKSALVGHRCYEIEASDENLDPR 639
L +K P G + G K + + + Y + N S + EAS PR
Sbjct: 748 LCMKIPALHGVITVHGSQKEARNIEKAIYKSFRNINSVDST-------QHEASQPPDMPR 800
Query: 640 GEGRVNRPTPIEETKALKFG----DRTLKIGTRLTEEQETRLTKLLGENLDLFAWSCKDM 695
G+ + EETK + D+ + I L+ E+E L +L +N D+FAWS D+
Sbjct: 801 GKTNL---ADQEETKCIPLQEAVPDKKVTISATLSREEELELLDVLQKNQDIFAWSAADL 857
Query: 696 PGIDPNFICHRLALNPSVKPVSQLRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLAN 755
G+ + I H L ++P ++P Q +R++ ++ A + EV +LL A+ IREV YP WLAN
Sbjct: 858 QGVSRDIIEHSLDIDPRMRPKKQRQRKMSEERTLAAKAEVQRLLDAKVIREVIYPEWLAN 917
Query: 756 VVMVKKANGKWRMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQIR 815
VV+V K NGK RMC+D+TDLNKAC KDS+PLP ID+ VD A+G + SL+D +SGYHQI
Sbjct: 918 VVLVPKKNGKMRMCIDFTDLNKACVKDSFPLPRIDTSVDKAAGCQRFSLLDCFSGYHQIW 977
Query: 816 MHPADEDKTAFMTARVNYCYRTMPFGLKNAGATYQRLMDRVFAGQVGRNMEVYVDDMIVK 875
+ DE K +F T YCY MP GLKNAGAT+ R+M +V Q+ RN+ YVDD++V
Sbjct: 978 LKKEDEGKASFTTPFGTYCYTRMPEGLKNAGATFSRMMGKVLGSQLQRNIIAYVDDVVVM 1037
Query: 876 SVRGLDHHQDLEEAFGEIRKHSMRLNPEKCSFGVQGGKFLGFMITSRGIEINPEKCKAIQ 935
S R DH +DL+E F +R ++LNPEKC FGV GK LG++I+S GI NP+K KAI
Sbjct: 1038 SKRKEDHIKDLQETFVNLRSAGLKLNPEKCVFGVSKGKMLGYIISSEGIRANPDKTKAIM 1097
Query: 936 QMKSPSNVKEVQRLTGRIAALSRFLPQSGDRSFPFFKCLRKNVAFEWTAECEEAFVRLKE 995
M PSN KEVQRLTGRIAAL+RF+ +S +RS PFFK LR+ EW E EAF +LK
Sbjct: 1098 SMAEPSNKKEVQRLTGRIAALNRFISRSAERSLPFFKVLREGKT-EWGPEQSEAFRQLKN 1156
Query: 996 LLSSPPILSKPIQGHPLHLYFAVSDSALSSVMLQEIDGE----HRIVYFVSHTLQGAEVR 1051
+++ +++ P PL LY A S+ A+S V++ E R VY+VS L GA++
Sbjct: 1157 YIATNLLVTVPEPDTPLLLYVAASEHAVSGVLVHETSDTKGTVQRPVYYVSEALSGAKLN 1216
Query: 1052 YQKIEKAALAVLVTARRLRPYFQSFPVKVRTDLPLRQVLQKPDLSGRLVAWSVELSEYGL 1111
Y +IEK A AVL +R+L+ YFQS +KV T PL +L+ + SGR+ W+ ELS++ +
Sbjct: 1217 YTEIEKIAYAVLCASRKLKHYFQSHEIKVPTSQPLGDILRNKEASGRIGKWAAELSQFDI 1276
Query: 1112 QYDKRGTVGAQSLADFVVELTPDRFER---VDTQWTLFVDGSSNSSGSGAGVTLEGPGEL 1168
Y R ++ +Q+LADF+ + TP +D WTL+ DG+ +G+GA L P L
Sbjct: 1277 TYVPRTSIKSQALADFMADWTPSNKNEEKVIDQPWTLYTDGAWGQAGAGAAAVLIAPSGL 1336
Query: 1169 VLEQSLKFEFKATNNQAEYEALIAGLKLAREVKIRSLLIRTDSQLVENQVKGTFQVKDPN 1228
L+ +++ EFKATNN AEYE LI GL A+ ++L+I+TDSQ+V QV+ + +P
Sbjct: 1337 KLKFAIRLEFKATNNIAEYEGLILGLNKAKASGAKTLVIKTDSQVVAGQVEKEYLAHNPE 1396
Query: 1229 LIKYLERVRYLMTLFQEVVVEYVPRAENQRADALAKLASTRKP---GNNKSVIQETLAYP 1285
L +YL VR L F+ ++Y+PRAEN AD LAK A+ P G ++
Sbjct: 1397 LARYLAVVRGLERRFKGFTLQYIPRAENYEADELAKAAANNTPLPEGTFHQIVTTPATET 1456
Query: 1286 SIEGELMACVNRGRTWMDPIISILAGDPAEVEQCT-KEQQREASHYTLIDGHLYRRGFST 1344
+ + W I L G ++ T K + A +YT IDG LY++G
Sbjct: 1457 LPKAFRSVLLTESEDWRQAIADCLKGKTTVDDEATAKRMEARARNYTSIDGILYKKGVVQ 1516
Query: 1345 PLLKCVSPEKYEAIMSEVHEGVCASHIGGRSLACKVLRAGFYWPTLRKDCMDFVKQCKEC 1404
PLLKC+S + ++ E+H G+C SHIG R+L+ K LR GFYWPT +D + VK CK C
Sbjct: 1517 PLLKCISQSEGRELLREIHSGMCGSHIGPRALSAKALRQGFYWPTHIRDAEEIVKTCKAC 1576
Query: 1405 QVFADLSKAPPKELVTMSAPWPFAMWGVDLVGPFPTARAQMKFILVAVDYFTKWIEAEPL 1464
Q F+ + P + A WP WG+DLVGP PTA+ KF +VA++YFT+WIEA+PL
Sbjct: 1577 QTFSPIQSGPSALTQLIPASWPLQRWGMDLVGPMPTAQGGNKFAVVAIEYFTRWIEAKPL 1636
Query: 1465 AKITSAKIVNFYWKRIVCRFGIPRAIVSDNGTQFSSSQTREFCKEMGIQMRFASVEHPQT 1524
ITS I F+W+ IVCRFG+PR + DNG QF S +EFC +G ++ FASV HP++
Sbjct: 1637 TTITSETIRKFFWQNIVCRFGVPRLLTVDNGKQFDSDNFKEFCHLIGTKIAFASVYHPES 1696
Query: 1525 NGQVESANRVILRGLRRRLAE-AKGAWLDELPAVLWSYNTTEQSTTRETPFRMTYGVDAM 1583
NG VE ANR I + + L KG W++ELP V+WS+NTT T TPF++ YG +AM
Sbjct: 1697 NGAVERANRTIFSAISKTLLNLRKGKWVEELPRVVWSHNTTVSRATGFTPFKLLYGEEAM 1756
Query: 1584 LPVEIDNFTWRTRPGFEEENQANMAVELDLLSETRDEAHIRETAMKQRVAAKFNSRVRVR 1643
LP EI + + R+ E++ + L R EA T +Q + +V +
Sbjct: 1757 LPEEIKHQSLRSMKQQLAEDEEYCK---ETLESIRLEAVENITRYQQETKNWRDRKVVRK 1813
Query: 1644 DMQVGDLVLKWRSGAP-GNKLTPNWEGPYRIVKVLGNGAYHLEELDGRRLPRSFNGLSLR 1702
D+Q GDLVL+ + P KL P WEGPY ++ +G+++L++L+GR ++N +LR
Sbjct: 1814 DIQNGDLVLRKKGDHPNAGKLQPKWEGPYTAIQAGRSGSFYLKDLEGRTSTHTWNVDNLR 1873
Query: 1703 YFY 1705
FY
Sbjct: 1874 RFY 1876
>ref|XP_476195.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|46981311|gb|AAT07629.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|46981243|gb|AAT07561.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1459
Score = 947 bits (2449), Expect = 0.0
Identities = 543/1391 (39%), Positives = 796/1391 (57%), Gaps = 92/1391 (6%)
Query: 328 KWCEFHRSAGHDTDDCRTLQREIDKLIRAGYQGNRQGQWRNGGDQNKAHKREEERADTKG 387
K+ + H H T++CR + ++K +R Y G +G G QN +G
Sbjct: 149 KFYKVHGPCNHATEECRQMASLVEKHVRQ-YDGKYEGVQ---GGQNML----------EG 194
Query: 388 KKKQESAAIATKGADDTFAQHSGPPVGTINTIAGGFGGGGDTHAARKRHVRAVNSV---- 443
+K + AI P IN I GG G ++ RK +VR ++ V
Sbjct: 195 QKVMKIEAIEEA------------PKRVINAITGGSSLGVESKRQRKAYVRQIHHVGTSY 242
Query: 444 HEVAFGFVHPDITISMADFEGIKPHKDDPIVVQLRMNSFNVRRVLLDQGSSADIIYGDAF 503
V + + I+ D EGI DP+V+ + + V+RVL+D GSSAD+++ DAF
Sbjct: 243 QSVPPAYSNTVISFGPEDAEGILFPHQDPLVISVEIAQCEVQRVLVDGGSSADVLFYDAF 302
Query: 504 DKLGLTDNDLTPYAGTLVGFAGEQVMVRGYIDLDTIFGEDECARVLKVRYLVLQVVASYN 563
K+ + ++ LT L GF G QV G I L +FG E R +V + V+ + YN
Sbjct: 303 KKMQIPEDRLTHAGIPLQGFGGHQVHTIGKISLQVVFGGGENKRREEVVFDVVDMPYQYN 362
Query: 564 VIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGKLKVDQKMAREC-YNNCLNFYGKKSALV 622
++GR+T+N A+I ++ +K P G + ++ Q AR+ N G
Sbjct: 363 AVLGRSTINIFEAIIHHNYICMKLPGPKGVIS-VRGGQLAARKFELQGTPNMKG------ 415
Query: 623 GHRCYEIEASDENLDPRGEGRVNRPTPIEETKALKFGDRTLKIGTRLTEEQETRLTKLLG 682
Y IE +GE N+ PI E K T K+ E +E
Sbjct: 416 ---VYIIEQK------QGEYNKNQK-PIPEGK-------TKKVVLDKNEPEE-------- 450
Query: 683 ENLDLFAWSCKDMPGIDPNFICHRLALNPSVKPVSQLRRRLGGDKGKAVQQEVDKLLAAE 742
+ G++ + I H LA+ P KP Q RR+ D+ +A + E++KLL A+
Sbjct: 451 ------------LEGVERSLIEHNLAIKPEHKPKKQKLRRMSIDRQQAAKAELEKLLKAK 498
Query: 743 FIREVKYPTWLANVVMVKKANGKWRMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELL 802
IREV +P WLAN V+VK G LNKACPKD +PLP ID LVD +G EL+
Sbjct: 499 VIREVLHPEWLANPVLVKMQMGSGEY------LNKACPKDDFPLPRIDQLVDATAGCELM 552
Query: 803 SLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMPFGLKNAGATYQRLMDRVFAGQVG 862
S +DAYSGYHQ+ M DE+K + +T YCY MPFGLKNAGAT+ RL+ +V A Q+G
Sbjct: 553 SFLDAYSGYHQVFMVKEDEEKPSLITPFGTYCYIRMPFGLKNAGATFARLICKVLANQLG 612
Query: 863 RNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMRLNPEKCSFGVQGGKFLGFMITSR 922
RN+E YVDD++VKS + H +DL+E F +RK S++LNPEKC FGV+ GK LGF+++ R
Sbjct: 613 RNVEAYVDDIVVKSKKAFTHGKDLQETFENLRKFSVKLNPEKCMFGVRVGKLLGFLVSKR 672
Query: 923 GIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRFLPQSGDRSFPFFKCLRKNVAFEW 982
GIE NP+K AIQQM+ P N +E+QRLTGR+A+LSRFL +S +R PFFK LR F+W
Sbjct: 673 GIEANPDKIAAIQQMEPPKNTREMQRLTGRMASLSRFLSKSAERGLPFFKTLRAVNNFKW 732
Query: 983 TAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSDSALSSVMLQEIDGEHRIVYFVS 1042
EC++AF LK+ L + P LS P +G PL LY A + +S+V++QE + VYFVS
Sbjct: 733 NEECQKAFDDLKDYLHNMPTLSSPQKGEPLLLYVAATPVTVSAVLVQEQGNKQMPVYFVS 792
Query: 1043 HTLQGAEVRYQKIEKAALAVLVTARRLRPYFQSFPVKVRTDLPLRQVLQKPDLSGRLVAW 1102
LQG + RY ++EK A+++ +R+LR YF S + + + P+ +VL +++GR+ W
Sbjct: 793 EALQGPKTRYIEVEKMIYAIVMASRKLRHYFLSHDITIPSTYPIGEVLSNKEIAGRIAKW 852
Query: 1103 SVELSEYGLQYDKRGTVGAQSLADFVVELTPDRFERVDTQ---WTLFVDGSSNSSGSGAG 1159
++EL + L+Y R + +Q LA FVVE TP E+ + + WT+F DG+ N++G+GA
Sbjct: 853 AMELLPFDLKYTSRTAIKSQVLAKFVVEWTPTELEKKEEEEKPWTVFSDGACNATGAGAA 912
Query: 1160 VTLEGPGELVLEQSLKFEFKATNNQAEYEALIAGLKLAREVKIRSLLIRTDSQLVENQVK 1219
++ P + L+ S + F +TNN AEYE ++ ++ +R + R L+I+TDS+LV
Sbjct: 913 AVVKTPMKQTLKYSARLNFPSTNNTAEYEGVLLAMRKSRALGARRLIIKTDSKLVAGHFS 972
Query: 1220 GTFQVKDPNLIKYLERVRYLMTLFQEVVVEYVPRAENQRADALAKLASTRKPGNNKSVIQ 1279
TF+ ++ + KYLE R F + V+ + R EN AD L K A+ +P N
Sbjct: 973 KTFEAREEIMTKYLEEARLNERHFLGITVKAITREENGEADELTKAAAAGQPLENS--FF 1030
Query: 1280 ETLAYPSIEGELMACV-NRGRTWMDPIISILAGDP-AEVEQCTKEQQREASHYTLIDGHL 1337
E L +PS + + + C+ G W DPI+ L + E E+ + Q A Y +IDG L
Sbjct: 1031 EILEHPSYDKKEVICIQEEGLDWRDPILKFLVSNKLPEKEEEARRVQLMARKYKVIDGQL 1090
Query: 1338 YRRGFSTPLLKCVSPEKYEAIMSEVHEGVCASHIGGRSLACKVLRAGFYWPTLRKDCMDF 1397
Y+ G + PLLKCV+ E+ ++ E+HEG+C +H RS+A KV+R G YWPT+ KD +
Sbjct: 1091 YKSGVTAPLLKCVTKEEGMQMVVEIHEGICGAHQAPRSVASKVIRQGIYWPTIMKDTEQY 1150
Query: 1398 VKQCKECQVFADLSKAPPKELVTMSAPWPFAMWGVDLVGPFPTARAQMKFILVAVDYFTK 1457
+K C+ CQ SKAPPKEL + WPF WG+D+VGP P A+ ++F++VA++YF++
Sbjct: 1151 IKTCRACQKVGSSSKAPPKELQPIPPVWPFYRWGIDIVGPLPRAKGDLRFVIVAIEYFSR 1210
Query: 1458 WIEAEPLAKITSAKIVNFYWKRIVCRFGIPRAIVSDNGTQFSSSQTREFCKEMGIQMRFA 1517
WIEAE +A+ITSA + F WK I+CRFGIP+ IV DNG QF S + ++ C+ + +++ FA
Sbjct: 1211 WIEAEAVARITSAAMQKFVWKNIICRFGIPKEIVCDNGKQFESEKFKDLCQGLHLKINFA 1270
Query: 1518 SVEHPQTNGQVESANRVILRGLRRRL-AEAKGAWLDELPAVLWSYNTTEQSTTRETPFRM 1576
SV HPQTNG VE AN ++ +++RL +KG W ++L +VLW+ TT T TPFR+
Sbjct: 1271 SVGHPQTNGAVERANGKVVEAIKKRLEGSSKGKWPEDLLSVLWALRTTVVWATGMTPFRL 1330
Query: 1577 TYGVDAMLPVEIDNFTWRTRPGFEEENQANMAVELDLLSETRDEAHIRETAMKQRVAAKF 1636
YG + M P E+ R F +E++ V L++L E R EA + A + ++
Sbjct: 1331 VYGDEPMTPSEVG--VNSPRVIFYQEDEQGRKVSLEMLDEIRVEALQKMEAYTEGTRKQY 1388
Query: 1637 NSRVRVRDMQVGDLVL-KWRSGAPGNKLTPNWEGPYRIVKVLGNGAYHLEELDGRRLPRS 1695
N +VR R+++ GDLVL K + KL WEGP+ + K + GAY L LDG L +
Sbjct: 1389 NKKVRPRNIEEGDLVLKKVLNEVAVGKLESKWEGPFIVRKKMEIGAYKLAHLDGEELNHT 1448
Query: 1696 FNGLSLRYFYS 1706
+N +SL+ FY+
Sbjct: 1449 WNAISLKKFYA 1459
>gb|AAL76007.1| prpol [Zea mays]
Length = 1317
Score = 929 bits (2402), Expect = 0.0
Identities = 509/1306 (38%), Positives = 769/1306 (57%), Gaps = 35/1306 (2%)
Query: 424 GGGGDTHAARKRHVRAVNSVHEVAFG-------FVHPDITISMADFEGIKPHKDDPIVVQ 476
GG A +K+ A V V + H IT S D + +D +V+
Sbjct: 22 GGSSSEPANKKQKKEAQRRVQHVGVQGPFIKSRWSHIPITFSQEDLQLKDYPHNDAMVIS 81
Query: 477 LRMNSFNVRRVLLDQGSSADIIYGDAFDKLGLTDNDLTPYAGTLVGFAGEQVMVRGYIDL 536
+ F V VL+D GS+ADII+ AF ++ ++ + L GF G Q++ G I +
Sbjct: 82 CVIKGFLVHNVLVDTGSAADIIFAKAFRQMQEPEDKIHDATHPLCGFGGRQIVALGKITM 141
Query: 537 DTIFGEDECARVLKVRYLVLQVVASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGK 596
FG R +V + ++ + YN IIGR TLN A++ A+L +K P G +
Sbjct: 142 SVTFGFINNTRTEQVVFDIVDMEYPYNAIIGRGTLNAFEAILHPAYLCMKIPSDQGPIA- 200
Query: 597 LKVDQKMARECYNNCLNFYGKKSALVGHRCYEIEASDENLDPRGEGRVNRPTPIEETKAL 656
+ Q+ AR N + + C + + E ++P P+ + +
Sbjct: 201 IHGSQEAARRAEGNWTDSKAIHNIDGAEACEQYKFRREKA-----ASADQPKPMLLCEDI 255
Query: 657 KFGDRTLKIGTRLTEEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHRLALNPSVKPV 716
++ + +G++L+EEQE L + L N D+FAWS D+ G++ + I H L ++PS +P
Sbjct: 256 --AEQKVLLGSQLSEEQEKTLIRFLFNNKDVFAWSANDLCGVNRDVIEHSLNVDPSFRPR 313
Query: 717 SQLRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKWRMCVDYTDLN 776
Q R++ DK + + EV +LL+A IREVKYP WLAN VMVKKANGKWRMC+D+TDLN
Sbjct: 314 KQRLRKMSDDKAEGARNEVKRLLSAGVIREVKYPEWLANTVMVKKANGKWRMCIDFTDLN 373
Query: 777 KACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYR 836
KACPKD +PLP IDSLVD A+ +EL+SL+D YSGYHQI M DE KT+F+T YCY
Sbjct: 374 KACPKDEFPLPRIDSLVDAAASSELMSLLDCYSGYHQIWMKKEDEPKTSFITPSGTYCYL 433
Query: 837 TMPFGLKNAGATYQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKH 896
MP GLKNAG ++ R+ +V Q+GRN+ YVDD+IVKS + +H DL+E F R+
Sbjct: 434 RMPEGLKNAGGSFSRMTAKVLQSQIGRNVLTYVDDIIVKSTKQENHIADLQETFASFRQA 493
Query: 897 SMRLNPEKCSFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAAL 956
++LNPEKC FGV+ GKFLG +++++GIE NP K +AI +M+ P+ K QRLTGR+A+L
Sbjct: 494 GLKLNPEKCVFGVKKGKFLGCLVSTKGIEANPSKIEAILRMEPPTTKKGAQRLTGRLASL 553
Query: 957 SRFLPQSGDRSFPFFKCLRKNVAFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYF 1016
+RF+ +S +R+ PFF+ L+ F+W ++AF LK+ L L+ P+ G PL LY
Sbjct: 554 NRFISRSAERNLPFFEVLKSAEVFQWGPIQQKAFEELKQYLIDLTTLTPPMSGAPLLLYV 613
Query: 1017 AVSDSALSSVMLQE-IDGE---HRIVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPY 1072
A S SA+S+ ++QE +DG+ +YFVS L ++ Y ++EK AVL+ +R+LR Y
Sbjct: 614 AASHSAVSAALVQEKLDGQVKRQAPIYFVSEVLSLSKKNYTELEKVLYAVLMASRKLRHY 673
Query: 1073 FQSFPVKVRTDLPLRQVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELT 1132
FQ++ + V + PL+ +++ + +GR+ W+ EL+E+ ++Y R ++ +Q+LADF+ + T
Sbjct: 674 FQAYNIIVPSSQPLKDIMRNREATGRIGKWAAELNEFCIEYVHRSSIQSQALADFIADWT 733
Query: 1133 P----DRFERVDTQWTLFVDGSSNSSGSGAGVTLEGPGELVLEQSLKFEFKATNNQAEYE 1188
P + + + WT+F DGS + G+GA L P ++ + + K +F TNN AEYE
Sbjct: 734 PGAQEEETNKDNEAWTVFCDGSWGTFGAGAAAVLVSPSKVKICYAAKLDFNCTNNIAEYE 793
Query: 1189 ALIAGLKLAREVKIRSLLIRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVV 1248
AL+ GL+ + + IR +++TDSQ+V + + + KDP L KYL+ VR + F+ V
Sbjct: 794 ALVLGLRKLKAMGIRRAILKTDSQVVSGHIDKSCKAKDPKLEKYLDMVRRIEASFEGFSV 853
Query: 1249 EYVPRAENQRADALAKLASTRKPGNNKSVIQETLAYPSIEGELMACVN----RGRTWMDP 1304
+ +PR +N+ AD LAK A+ P V ET+ PS+E A +N W
Sbjct: 854 KNIPRGQNEHADLLAKSAAQGLP-LPSDVFFETIKAPSVELLERAVLNISPVFSEDWRTE 912
Query: 1305 IISILAGD-PAEVEQCTKEQQREASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVH 1363
IIS L G ++ E K + A Y +I+G LY+ G PLLKC+S + +M E+H
Sbjct: 913 IISYLQGKFLSDDEAYNKRIEARARPYVMIEGELYKHGVCAPLLKCLSRTEGIELMKEIH 972
Query: 1364 EGVCASHIGGRSLACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSA 1423
G+C SHIG R L KV R GFYWP D + V++C+ CQ A K P +
Sbjct: 973 AGLCGSHIGSRPLLGKVFRQGFYWPKAASDAAELVQKCEGCQKCARDQKQPSSLTQLIQP 1032
Query: 1424 PWPFAMWGVDLVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCR 1483
WP WG+DL+GP P A+ +++++VAV+YF+KWIEA+PLA ITSA + F+W+ IVCR
Sbjct: 1033 TWPLQRWGLDLLGPLPPAQGNLRYVVVAVEYFSKWIEAKPLATITSATVQKFFWQNIVCR 1092
Query: 1484 FGIPRAIVSDNGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRRRL 1543
FG+P+AI DNGTQF S R+FC ++G ++ FASV HP++NG VE AN +I+ G+ + +
Sbjct: 1093 FGVPKAITVDNGTQFDSEAFRDFCDQIGTKIHFASVRHPESNGLVERANGIIMTGIMKLI 1152
Query: 1544 -AEAKGAWLDELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEE 1602
+ +G W D+L V+WS+NTT +T TPF++ +G +A+ P + + R E +
Sbjct: 1153 FNQPRGKWPDQLIKVVWSHNTTTSRSTGFTPFKLLFGDEAITPEKAKAGSIRIVASAESD 1212
Query: 1603 NQANMAVELDLLSETRDEAHIRETAMKQRVAAKFNSR-VRVRDMQVGDLVLKWRSGAPG- 1660
++A ++E D L R +A + Q K+ R VR+++++ G LVL+ R P
Sbjct: 1213 SEAAYSIEKDALEGIRLQA-VENINKYQAETVKWRDRKVRLKNIEPGHLVLR-RVANPET 1270
Query: 1661 -NKLTPNWEGPYRIVKVLGNGAYHLEELDGRRLPRSFNGLSLRYFY 1705
KL W+GP+ + G+Y L++++G +PRS+N LR +Y
Sbjct: 1271 VGKLQLKWDGPFLVASSSRPGSYRLKDMNGSDIPRSWNADELRRYY 1316
>ref|XP_474675.1| OSJNBa0027O01.4 [Oryza sativa (japonica cultivar-group)]
gi|38346188|emb|CAD39529.2| OSJNBa0027O01.4 [Oryza sativa
(japonica cultivar-group)]
Length = 2013
Score = 921 bits (2381), Expect = 0.0
Identities = 589/1721 (34%), Positives = 870/1721 (50%), Gaps = 160/1721 (9%)
Query: 30 SREADSVAEFRPFSEDVENVAIPDNMKTLVLDSYSGDSDPKDHLLYFNTKMVIIAASDAV 89
+R D + F++D+ V P K ++ Y G ++P+ L + + +
Sbjct: 409 NRHDDDLDGVAAFTDDLRRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKA 468
Query: 90 KCRMFPSTFKSTAMAWFTTLPRGSISNFRDFSSKFLVQFSANKNQPVTINDLYNIRQQEG 149
P +A +W LPRG+I ++ + F+ F +P T DLYN+ Q+ G
Sbjct: 469 MANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSG 528
Query: 150 ESLKEYMARYSAASVKVEDEEPRACALAFKNGLLPGGLNSKLTRKPARSMGEMRARASTY 209
ESL++Y+ R+S K+ D AF G+ L K RKP R++ M +A+ Y
Sbjct: 529 ESLRDYIRRFSEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFEKANEY 588
Query: 210 ILDEEDDAFKRKRAKLEKGDTSPKRVKKDRSGEDKGDGKQQRPGKGKSVFKPTKEQLYPR 269
AK E T+ K+ G + KG
Sbjct: 589 -------------AKAEDAVTASKQ-----------SGPSWKQNKGTPA----------- 613
Query: 270 RDDYEQRRPWQSKSHRQREETDMVMNTDVSDMLRGASDANLVDEPEAPKYQPRDANPKKW 329
S +H+ R+ + S R S N D+ +
Sbjct: 614 ------TGGGGSNNHKDRKRKPAELVATASHSSRQRSRVNTFDKIMNSQ----------- 656
Query: 330 CEFHRSAGHDTDDCRTLQREIDKLIRAGYQGNRQGQWRNGGDQNKAHKREEERADTKGKK 389
C H ++ H DC ++ D+ + R D+ ++ R+++ DT
Sbjct: 657 CPHHPNSNHVAKDCFVYKQFADQYTKTA---------RKNSDEEQSTSRKKDDGDTPAG- 706
Query: 390 KQESAAIATKGADDTFAQHSGPPVGTINTIAGGFGGGGDTHAARKRHV--RAVNSVH--- 444
F H +N I FGG + RK+ + R +N+V
Sbjct: 707 ---------------FQDHRKE----LNHI---FGGPLAYESKRKQKLTEREINAVQPDT 744
Query: 445 -------EVAFGFV---HPDITISMADFEGIKPHKDDPIVVQLRMNSFNVRRVLLDQGSS 494
E+A F HPD + + P+V+ + + +RR L+D GS+
Sbjct: 745 PQYLRWSEIAIKFDRSDHPDRVVHPGRY---------PLVLDPVVRNVKLRRTLIDGGSA 795
Query: 495 ADIIYGDAFDKLGLTDNDL----TPYAGTLVGFAGEQVMVRGYIDLDTIFGEDECARVLK 550
+I++ D + + ++L P+ G + G + + G I L FG E R
Sbjct: 796 LNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL---GQITLPVTFGTRENFRTEN 852
Query: 551 VRYLVLQVVASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGKLKVDQKMARECYNN 610
+ + V +Y+ I+GR L + AV ++ +K P G V L+ D K A C
Sbjct: 853 ISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRG-VLSLRSDIKQAVTCDKE 911
Query: 611 CLNFYGKKSALVGHRCYEIEASDENLDPRGEGRVNRPTPIEETKALKFGD---RTLKIGT 667
+ + + A+ + EG V TK K G+ +T KI
Sbjct: 912 SCDMAQTREMASAREDIRLAAATAS-----EGEV------PATKISKSGESEAKTKKIPL 960
Query: 668 RLTEEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHRLALNPSVKPVSQLRRRLGGDK 727
++ +T N D+FAW DMPGI I H L + KP+ Q RR D+
Sbjct: 961 DPSDPTKT------ANNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDR 1014
Query: 728 GKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKWRMCVDYTDLNKACPKDSYPLP 787
A+++E+ KLLAA FI+EV +P WLAN V+V+K G+WRMCVDYTDLNK+CPKD + LP
Sbjct: 1015 KDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLP 1074
Query: 788 SIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMPFGLKNAGA 847
ID +VD +G ELLS +D YSGYHQIR+ +D KT+F+T YCY TMPFGLKNAGA
Sbjct: 1075 RIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGA 1134
Query: 848 TYQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMRLNPEKCSF 907
TYQR++ R F+ Q+GRN+E YVDD++VK+ + D DLEE F IR M+LNPEKC+F
Sbjct: 1135 TYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTF 1194
Query: 908 GVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRFLPQSGDRS 967
GV GK LGFM++ RGI+ NPEK AI MK PS K+VQ+LTG +AALSRF+ + G+R
Sbjct: 1195 GVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERG 1254
Query: 968 FPFFKCLRKNVAFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSDSALSSVM 1027
PFFK L+K F+W E ++AF K+LL+ PP+L+ P PL LY + + +S+V+
Sbjct: 1255 MPFFKLLKKTDDFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVL 1314
Query: 1028 LQEIDGE------HRIVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPYFQSFPVKVR 1081
+ E + E R +YFVS L ++ RY +++K +L+T R+L YFQ V V
Sbjct: 1315 VVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVV 1374
Query: 1082 TDLPLRQVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELT---PDRFER 1138
T PL +L +++GR+ W++EL + + R ++ +Q+LADFV E T D
Sbjct: 1375 TSFPLGDILHNREVNGRIAKWALELMSLDISFKPRISIKSQALADFVAEWTECQEDTPAE 1434
Query: 1139 VDTQWTLFVDGSSNSSGSGAGVTLEGPGELVLEQSLKFEFKATNNQAEYEALIAGLKLAR 1198
WT+ DGS SG+GAGV L P L L F A++N AEYEAL+ GL++A
Sbjct: 1435 NMEHWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAI 1494
Query: 1199 EVKIRSLLIRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVVEYVPRAENQR 1258
+ I+ L++R DSQLV NQV + D N++ Y + VR L F + + +V R N+
Sbjct: 1495 SLGIKRLIVRGDSQLVVNQVMKEWSYLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEA 1554
Query: 1259 ADALAKLASTRKPGNNKSVIQETLAYPSIEGELMACVNRGR-------TWMDPIISILAG 1311
AD LA S R+ + V E L P++ + V W +P+I L
Sbjct: 1555 ADRLANFGSKREAAPS-DVFVEHLYTPTVPHKDTTQVAGTHDAAMVEVDWREPLIRFLTS 1613
Query: 1312 DPAEVEQCTKEQ-QREASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVCASH 1370
++ E+ R + Y L + LY++ S L +CVS E+ ++ ++H G+C +H
Sbjct: 1614 QELPQDKDEAERISRRSKLYVLHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNH 1673
Query: 1371 IGGRSLACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPFAMW 1430
R++ K R GF+WPT D V+ C+ CQ FA P +EL T+ WPFA+W
Sbjct: 1674 AAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVW 1733
Query: 1431 GVDLVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFGIPRAI 1490
G+D+VGPF A + VA+D F+KWIEA+P+ IT+ +F+ IV RFG+P I
Sbjct: 1734 GLDMVGPFKKAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRI 1792
Query: 1491 VSDNGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRR----RLAEA 1546
++DNGTQF+ ++FC++ GI++ +ASV HP +NGQVE AN +IL+G++ RL
Sbjct: 1793 ITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPY 1852
Query: 1547 KGAWLDELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEENQAN 1606
G W+ +LP+VLWS TT T ++PF + YG +AMLP E++ + R R EE + +
Sbjct: 1853 AGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRFRNFREERYEED 1912
Query: 1607 MAVELDLLSETRDEAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVL-KWRSGAPGNKLTP 1665
+L L E R+ A IR Q + N VR R VGDLVL K ++ +KL+P
Sbjct: 1913 RVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTRDRHKLSP 1972
Query: 1666 NWEGPYRIVKVLGNGAYHLEELDGRRLPRSFNGLSLRYFYS 1706
WEGP+ I +V G+Y L+ DG + S+N LR FY+
Sbjct: 1973 LWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 2013
>ref|NP_918169.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 2012
Score = 920 bits (2377), Expect = 0.0
Identities = 590/1722 (34%), Positives = 869/1722 (50%), Gaps = 164/1722 (9%)
Query: 31 READSVAEFRPFSEDVENVAIPDNMKTLVLDSYSGDSDPKDHLLYFNTKMVIIAASDAVK 90
R D + F++D+ V P K ++ Y G ++P+ L + + +
Sbjct: 409 RHDDDLDGVAAFTDDLRRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAM 468
Query: 91 CRMFPSTFKSTAMAWFTTLPRGSISNFRDFSSKFLVQFSANKNQPVTINDLYNIRQQEGE 150
P +A +W LPRG+I ++ + F+ F +P T DLYN+ Q+ GE
Sbjct: 469 ANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGE 528
Query: 151 SLKEYMARYSAASVKVEDEEPRACALAFKNGLLPGGLNSKLTRKPARSMGEMRARASTYI 210
SL++Y+ R+S K+ D AF G+ L K RKP R++ M +A+ Y
Sbjct: 529 SLRDYIRRFSEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFEKANEY- 587
Query: 211 LDEEDDAFKRKRAKLEKGDTSPKRVKKDRSGEDKGDGKQQRPGKGKSVFKPTKEQLYPRR 270
AK E T+ K+ G + KG
Sbjct: 588 ------------AKAEDAVTASKQ-----------SGPSWKQNKGTPA------------ 612
Query: 271 DDYEQRRPWQSKSHRQREETDMVMNTDVSDMLRGASDANLVDEPEAPKYQPRDANPKKWC 330
S +H+ R+ + S R S N D+ + C
Sbjct: 613 -----TGGGGSNNHKDRKRKPAELVATASHSSRQRSRVNTFDKIMNSQ-----------C 656
Query: 331 EFHRSAGHDTDDCRTLQREIDKLIRAGYQGNRQGQWRNGGDQNKAHKREEERADTKGKKK 390
H ++ H DC ++ D+ + R D+ ++ R+++ DT
Sbjct: 657 PHHPNSNHVAKDCFVYKQFADQYTKTA---------RKNTDEEQSTSRKKDDGDTPAG-- 705
Query: 391 QESAAIATKGADDTFAQHSGPPVGTINTIAGGFGGGGDTHAARKRHV--RAVNSVH---- 444
F H +N I FGG + RK+ + R +N+V
Sbjct: 706 --------------FQDHRKE----LNHI---FGGPLAYESKRKQKLTEREINAVQPDTP 744
Query: 445 ------EVAFGFV---HPDITISMADFEGIKPHKDDPIVVQLRMNSFNVRRVLLDQGSSA 495
E+A F HPD + + P+V+ + + +RR L+D GS+
Sbjct: 745 QYLRWSEIAIKFDRSDHPDRVVHPGRY---------PLVLDPVVRNVKLRRTLIDGGSAL 795
Query: 496 DIIYGDAFDKLGLTDNDL----TPYAGTLVGFAGEQVMVRGYIDLDTIFGEDECARVLKV 551
+I++ D + + ++L P+ G + G + + G I L FG E R +
Sbjct: 796 NILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL---GQITLPVTFGTRENFRTENI 852
Query: 552 RYLVLQVVASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGKLKVDQKMARECYNNC 611
+ V +Y+ I+GR L + AV ++ +K P G V L+ D K A C
Sbjct: 853 SFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRG-VLSLRSDVKQAVTCDKES 911
Query: 612 LNFYGKKSALVGHRCYEIEASDENLDPRGEGRVNRPTPIEETKALKFGD---RTLKIGTR 668
+ + + A+ + EG I TK K G+ +T KI
Sbjct: 912 CDMAQTREMASAREDIRLAAATAS-----EGE------IPATKTSKSGESEAKTKKIPLD 960
Query: 669 LTEEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHRLALNPSVKPVSQLRRRLGGDKG 728
++ +T N D+FAW DMPGI I H L + KP+ Q RR D+
Sbjct: 961 PSDPTKT------ANNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRK 1014
Query: 729 KAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKWRMCVDYTDLNKACPKDSYPLPS 788
A+++E+ KLLAA FI+EV +P WLAN V+V+K G+W MCVDYTDLNK+CPKD + LP
Sbjct: 1015 DAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWLMCVDYTDLNKSCPKDPFGLPR 1074
Query: 789 IDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMPFGLKNAGAT 848
ID +VD +G ELLS +D YSGYHQIR+ +D KT+F+T YCY TMPFGLKNAGAT
Sbjct: 1075 IDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGAT 1134
Query: 849 YQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMRLNPEKCSFG 908
YQR++ R F+ Q+GRN+E YVDD++VK+ + D DLEE F IR M+LNPEKC+FG
Sbjct: 1135 YQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFG 1194
Query: 909 VQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRFLPQSGDRSF 968
V GK LGFM++ RGI+ NPEK AI MKSPS K+VQ+LTG +AALSRF+ + G+R
Sbjct: 1195 VPSGKLLGFMVSHRGIQANPEKVTAILNMKSPSTQKDVQKLTGCMAALSRFVSRLGERGM 1254
Query: 969 PFFKCLRKNVAFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSDSALSSVML 1028
PFFK L+K +F W E ++AF K+LL+ PP+L+ P PL LY + + +S+V++
Sbjct: 1255 PFFKLLKKTDSFRWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLV 1314
Query: 1029 QEIDGE------HRIVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPYFQSFPVKVRT 1082
E + E R +YFVS L ++ RY +++K +L+T R+L YFQ V V T
Sbjct: 1315 VEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVT 1374
Query: 1083 DLPLRQVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELT---PDRFERV 1139
PL +L + +GR+ W++EL + + R ++ +Q+LADFV E T D
Sbjct: 1375 SFPLGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVAEWTECQEDTPAEN 1434
Query: 1140 DTQWTLFVDGSSNSSGSGAGVTLEGPGELVLEQSLKFEFKATNNQAEYEALIAGLKLARE 1199
WT+ DGS SG+GAGV L P L L F A++N AEYEAL+ GL++A
Sbjct: 1435 MEHWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAIS 1494
Query: 1200 VKIRSLLIRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVVEYVPRAENQRA 1259
+ I+ L++R DSQLV NQV + D N++ Y + VR L F + + +V R N+ A
Sbjct: 1495 LGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAA 1554
Query: 1260 DALAKLASTRKPGNNKSVIQETLAYPSIE---------GELMACVNRGRTWMDPIISILA 1310
D LA S R+ + V E L P++ +A V W +P+I L
Sbjct: 1555 DRLANFGSKREAAPS-DVFVEHLYSPTVPHKDATQAAGAHDVAMVE--ADWREPLIRFLT 1611
Query: 1311 GDPAEVEQCTKEQ-QREASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVCAS 1369
++ E+ R + Y L + LY++ S L +CVS E+ ++ ++H G+C +
Sbjct: 1612 SQELPQDKDEAERISRRSKLYVLHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGN 1671
Query: 1370 HIGGRSLACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPFAM 1429
H R++ K R GF+WPT D V+ C+ CQ FA P +EL T+ WPFA+
Sbjct: 1672 HAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAV 1731
Query: 1430 WGVDLVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFGIPRA 1489
WG+D+VGPF A + VA+D F+KWIEA+P+ IT+ +F+ IV RFG+P
Sbjct: 1732 WGLDMVGPFKKAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNR 1790
Query: 1490 IVSDNGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRR----RLAE 1545
I++DNGTQF+ ++FC++ GI++ +ASV HP +NGQVE AN +IL+G++ RL
Sbjct: 1791 IITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKP 1850
Query: 1546 AKGAWLDELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEENQA 1605
G W+ +LP+VLWS TT T ++PF + YG +AMLP E++ + R R EE +
Sbjct: 1851 YAGKWVQQLPSVLWSLRTTSSRATGQSPFFLVYGAEAMLPSEVEFESLRFRNFREERYEE 1910
Query: 1606 NMAVELDLLSETRDEAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVL-KWRSGAPGNKLT 1664
+ +L L E R+ A IR Q + N VR R VGDLVL K ++ +KL+
Sbjct: 1911 DRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTRDRHKLS 1970
Query: 1665 PNWEGPYRIVKVLGNGAYHLEELDGRRLPRSFNGLSLRYFYS 1706
P WEGP+ I +V G+Y L+ DG + S+N LR FY+
Sbjct: 1971 PLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 2012
>gb|AAP52499.1| putative gag-pol precursor [Oryza sativa (japonica cultivar-group)]
gi|37531820|ref|NP_920212.1| putative gag-pol precursor
[Oryza sativa (japonica cultivar-group)]
gi|22128689|gb|AAM92802.1| putative gag-pol precursor
[Oryza sativa (japonica cultivar-group)]
Length = 2017
Score = 919 bits (2375), Expect = 0.0
Identities = 588/1721 (34%), Positives = 870/1721 (50%), Gaps = 160/1721 (9%)
Query: 30 SREADSVAEFRPFSEDVENVAIPDNMKTLVLDSYSGDSDPKDHLLYFNTKMVIIAASDAV 89
+R D + F++D+ V P K ++ Y G ++P+ L + + +
Sbjct: 413 NRHDDDLDGVAAFTDDLRRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKA 472
Query: 90 KCRMFPSTFKSTAMAWFTTLPRGSISNFRDFSSKFLVQFSANKNQPVTINDLYNIRQQEG 149
P +A +W LPRG+I ++ + F+ F +P T DLYN+ Q+ G
Sbjct: 473 MANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSG 532
Query: 150 ESLKEYMARYSAASVKVEDEEPRACALAFKNGLLPGGLNSKLTRKPARSMGEMRARASTY 209
ESL++Y+ R+S K+ D AF G+ L K RKP R++ M +A+ Y
Sbjct: 533 ESLRDYIRRFSEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFEKANEY 592
Query: 210 ILDEEDDAFKRKRAKLEKGDTSPKRVKKDRSGEDKGDGKQQRPGKGKSVFKPTKEQLYPR 269
AK E T+ K+ G + KG
Sbjct: 593 -------------AKAEDAVTASKQ-----------SGPSWKQNKGTPA----------- 617
Query: 270 RDDYEQRRPWQSKSHRQREETDMVMNTDVSDMLRGASDANLVDEPEAPKYQPRDANPKKW 329
S +H+ R+ + S R S N D+ +
Sbjct: 618 ------TGGGGSNNHKDRKRKPAELVATASHSSRQRSRVNTFDKIMNSQ----------- 660
Query: 330 CEFHRSAGHDTDDCRTLQREIDKLIRAGYQGNRQGQWRNGGDQNKAHKREEERADTKGKK 389
C H ++ H DC ++ D+ + R D+ ++ R+++ DT
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFADQYTKTA---------RKNSDEEQSTSRKKDDGDTLAG- 710
Query: 390 KQESAAIATKGADDTFAQHSGPPVGTINTIAGGFGGGGDTHAARKRHV--RAVNSVH--- 444
F H +N I FGG + RK+ + R +N+V
Sbjct: 711 ---------------FQDHRKE----LNHI---FGGPLAYESKRKQKLTEREINAVQPDT 748
Query: 445 -------EVAFGFV---HPDITISMADFEGIKPHKDDPIVVQLRMNSFNVRRVLLDQGSS 494
E+A F HPD + + P+V+ + + +RR L+D GS+
Sbjct: 749 PQYLRWSEIAIKFDRSDHPDRVVHPGRY---------PLVLDPVVRNVKLRRTLIDGGSA 799
Query: 495 ADIIYGDAFDKLGLTDNDL----TPYAGTLVGFAGEQVMVRGYIDLDTIFGEDECARVLK 550
+I++ D + + ++L P+ G + G + + G I L FG E R
Sbjct: 800 LNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL---GQITLPVTFGTRENFRTEN 856
Query: 551 VRYLVLQVVASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGKLKVDQKMARECYNN 610
+ + V +Y+ I+GR L + AV ++ +K P G V L+ D K A C
Sbjct: 857 ISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRG-VLSLRSDIKQAVTCDKE 915
Query: 611 CLNFYGKKSALVGHRCYEIEASDENLDPRGEGRVNRPTPIEETKALKFGD---RTLKIGT 667
+ + + A+ + EG V TK K G+ +T KI
Sbjct: 916 SCDMAQTREMASAREDIRLAAATAS-----EGEV------PATKISKSGESEAKTKKIPL 964
Query: 668 RLTEEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHRLALNPSVKPVSQLRRRLGGDK 727
++ +T N D+FAW DMPGI I H L + KP+ Q RR D+
Sbjct: 965 DPSDPTKT------ANNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDR 1018
Query: 728 GKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKWRMCVDYTDLNKACPKDSYPLP 787
A+++E+ KLLAA FI+EV +P WLAN V+V+K G+WRMCVDYTDLNK+CPKD + LP
Sbjct: 1019 KDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLP 1078
Query: 788 SIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMPFGLKNAGA 847
ID +VD +G ELLS +D YSGYHQIR+ +D KT+F+T YCY TMPFGLKNAGA
Sbjct: 1079 RIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGA 1138
Query: 848 TYQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMRLNPEKCSF 907
TYQR++ R F+ Q+GRN+E YVDD++VK+ + D DLEE F IR M+LNPEKC+F
Sbjct: 1139 TYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLILDLEETFASIRAFRMKLNPEKCTF 1198
Query: 908 GVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRFLPQSGDRS 967
GV GK LGFM++ RGI+ NPEK AI MK PS K+VQ+LTG +AALSRF+ + G+R
Sbjct: 1199 GVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERG 1258
Query: 968 FPFFKCLRKNVAFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSDSALSSVM 1027
PFFK L+K F+W E ++AF K+LL+ PP+L+ P PL LY + + +S+V+
Sbjct: 1259 MPFFKLLKKTDDFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVL 1318
Query: 1028 LQEIDGE------HRIVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPYFQSFPVKVR 1081
+ E + E R +YFVS L ++ RY +++K +L+T R+L YFQ V V
Sbjct: 1319 VVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVV 1378
Query: 1082 TDLPLRQVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELT---PDRFER 1138
T PL +L + +GR+ W++EL L + R ++ +Q+LADFV E T D +
Sbjct: 1379 TSFPLGDILHNREANGRIAKWALELMSLDLSFKPRISIKSQALADFVAEWTECQEDTTVK 1438
Query: 1139 VDTQWTLFVDGSSNSSGSGAGVTLEGPGELVLEQSLKFEFKATNNQAEYEALIAGLKLAR 1198
WT+ DGS SG+GAGV L P L L F A++N AEYEAL+ GL++A
Sbjct: 1439 KMEHWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAI 1498
Query: 1199 EVKIRSLLIRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVVEYVPRAENQR 1258
+ I+ L++R DSQLV NQV + D N+ Y + VR L F + + +V R +N+
Sbjct: 1499 SLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMKAYRQEVRKLEDKFDGLELSHVLRHDNEA 1558
Query: 1259 ADALAKLASTRKPGNNKSVIQETLAYPSIEGE-------LMACVNRGRTWMDPIISILAG 1311
AD LA S R+ + V E L P++ + + W +P+I L
Sbjct: 1559 ADRLANFGSKREVAPS-DVFVEHLYTPTVPHKDTTQAAGIHDVAMVETDWREPLIRFLTS 1617
Query: 1312 DPAEVEQCTKEQ-QREASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVCASH 1370
++ E+ R + Y + + LY++ S L +CVS E+ ++ ++H G+C +H
Sbjct: 1618 QELPQDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNH 1677
Query: 1371 IGGRSLACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPFAMW 1430
R++ K R GF+WPT D V+ C+ CQ FA P +EL T+ WPFA+W
Sbjct: 1678 AAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVW 1737
Query: 1431 GVDLVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFGIPRAI 1490
G+D+VGPF A + VA+D F+KWIEA+P+ IT+ +F+ IV RFG+P I
Sbjct: 1738 GLDMVGPFKKAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRI 1796
Query: 1491 VSDNGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRR----RLAEA 1546
++DNGTQF+ ++FC++ GI++ +ASV HP +NGQVE AN +IL+G++ RL
Sbjct: 1797 ITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPY 1856
Query: 1547 KGAWLDELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEENQAN 1606
G W+ +LP+VLWS TT T ++PF + YG +AMLP E++ + R R EE + +
Sbjct: 1857 AGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRFRNFREERYEED 1916
Query: 1607 MAVELDLLSETRDEAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVL-KWRSGAPGNKLTP 1665
+L L E R+ A IR Q + N VR R VGDLVL K ++ +KL+P
Sbjct: 1917 RVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTRDRHKLSP 1976
Query: 1666 NWEGPYRIVKVLGNGAYHLEELDGRRLPRSFNGLSLRYFYS 1706
WEGP+ I +V G+Y L+ DG + S+N LR FY+
Sbjct: 1977 LWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEYLRRFYA 2017
>ref|XP_475035.1| OSJNBa0042F21.5 [Oryza sativa (japonica cultivar-group)]
gi|38347303|emb|CAE02298.2| OSJNBa0042F21.5 [Oryza sativa
(japonica cultivar-group)]
Length = 1950
Score = 918 bits (2372), Expect = 0.0
Identities = 585/1720 (34%), Positives = 865/1720 (50%), Gaps = 160/1720 (9%)
Query: 31 READSVAEFRPFSEDVENVAIPDNMKTLVLDSYSGDSDPKDHLLYFNTKMVIIAASDAVK 90
R D + F++D+ V P K ++ Y G ++P+ L + + +
Sbjct: 347 RHDDDLDGVAAFTDDLRRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAM 406
Query: 91 CRMFPSTFKSTAMAWFTTLPRGSISNFRDFSSKFLVQFSANKNQPVTINDLYNIRQQEGE 150
P +A +W LPRG+I ++ + F+ F +P T DLYN+ Q+ GE
Sbjct: 407 ANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGE 466
Query: 151 SLKEYMARYSAASVKVEDEEPRACALAFKNGLLPGGLNSKLTRKPARSMGEMRARASTYI 210
SL++Y+ R+S K+ D AF G+ L K RKP R++ M +A+ Y
Sbjct: 467 SLRDYIRRFSEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFEKANEYT 526
Query: 211 LDEEDDAFKRKRAKLEKGDTSPKRVKKDRSGEDKGDGKQQRPGKGKSVFKPTKEQLYPRR 270
K + + K+ + G G G
Sbjct: 527 ----------------KAEDAVTASKQSGPSWKQNKGTPATGGGG--------------- 555
Query: 271 DDYEQRRPWQSKSHRQREETDMVMNTDVSDMLRGASDANLVDEPEAPKYQPRDANPKKWC 330
S +H+ R+ + S R S N D+ + C
Sbjct: 556 ----------SNNHKDRKRKPAELVATASHSSRQRSRVNTFDKIMNSQ-----------C 594
Query: 331 EFHRSAGHDTDDCRTLQREIDKLIRAGYQGNRQGQWRNGGDQNKAHKREEERADTKGKKK 390
H ++ H DC ++ D+ + R D+ ++ R+++ DT
Sbjct: 595 PHHPNSNHVAKDCFVYKQFADQYTKTA---------RKNSDEEQSTSRKKDDGDTPAG-- 643
Query: 391 QESAAIATKGADDTFAQHSGPPVGTINTIAGGFGGGGDTHAARKRHV--RAVNSVH---- 444
F H +N I FGG + RK+ + R +N+V
Sbjct: 644 --------------FQDHRKE----LNHI---FGGPLAYESKRKQKLTEREINAVQPDTP 682
Query: 445 ------EVAFGFV---HPDITISMADFEGIKPHKDDPIVVQLRMNSFNVRRVLLDQGSSA 495
E+A F HPD + + P+V+ + + +RR L+D GS+
Sbjct: 683 QYLRWSEIAIKFDRSDHPDRVVHPGRY---------PLVLDPVVRNVKLRRTLIDGGSAL 733
Query: 496 DIIYGDAFDKLGLTDNDL----TPYAGTLVGFAGEQVMVRGYIDLDTIFGEDECARVLKV 551
+I++ D + + ++L P+ G + G + + G I L FG E R +
Sbjct: 734 NILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL---GQITLPVTFGTRENFRTENI 790
Query: 552 RYLVLQVVASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGKLKVDQKMARECYNNC 611
+ V +Y+ I+GR L + AV ++ +K P G V L+ D K A C
Sbjct: 791 SFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRG-VLSLRSDIKQAVTCDKES 849
Query: 612 LNFYGKKSALVGHRCYEIEASDENLDPRGEGRVNRPTPIEETKALKFGD---RTLKIGTR 668
+ + + A+ + EG I TK K G+ +T KI
Sbjct: 850 CDMAQTREMASAREDIRLAAATAS-----EGE------IPATKTSKSGESEAKTKKIPLD 898
Query: 669 LTEEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHRLALNPSVKPVSQLRRRLGGDKG 728
++ +T N D+FAW DMPGI I H L + KP+ Q RR D+
Sbjct: 899 PSDPTKT------ANNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRK 952
Query: 729 KAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKWRMCVDYTDLNKACPKDSYPLPS 788
A+++E+ KLLAA FI+EV +P WLAN V+V+K G+WRMCVDYTDLNK+CPKD + LP
Sbjct: 953 DAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPR 1012
Query: 789 IDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMPFGLKNAGAT 848
ID +VD +G ELLS +D YSGYHQIR+ +D KT+F+T YCY TMPFGLKNAGAT
Sbjct: 1013 IDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGAT 1072
Query: 849 YQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMRLNPEKCSFG 908
YQR++ R F+ Q+GRN+E YVDD++VK+ + D DLEE F IR M+LNPEKC+FG
Sbjct: 1073 YQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFG 1132
Query: 909 VQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRFLPQSGDRSF 968
V GK LGFM++ RGI+ NPEK AI MK PS K+VQ+LTG +AALSRF+ + G+R
Sbjct: 1133 VPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGM 1192
Query: 969 PFFKCLRKNVAFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSDSALSSVML 1028
PFFK L+K F+W E ++AF K+LL+ PPIL+ P PL LY + + +S+V++
Sbjct: 1193 PFFKLLKKTDNFQWGPEAQKAFEDFKKLLTEPPILASPHPQEPLLLYVSATSQVVSTVLV 1252
Query: 1029 QEIDGE------HRIVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPYFQSFPVKVRT 1082
E + E R +YFVS L ++ RY +++K +L+T R+L YFQ V V T
Sbjct: 1253 VEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVT 1312
Query: 1083 DLPLRQVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELT---PDRFERV 1139
PL +L + +GR+ W++EL + + R ++ +Q+LADFV E T D
Sbjct: 1313 SFPLGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVAEWTECQEDTPAEN 1372
Query: 1140 DTQWTLFVDGSSNSSGSGAGVTLEGPGELVLEQSLKFEFKATNNQAEYEALIAGLKLARE 1199
WT+ DGS SG+GAGV L P L L F A++N AEYEAL+ GL++A
Sbjct: 1373 MEHWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAIS 1432
Query: 1200 VKIRSLLIRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVVEYVPRAENQRA 1259
+ I+ L++R DSQLV NQV + D N++ Y + VR L F + + +V R N+ A
Sbjct: 1433 LGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAA 1492
Query: 1260 DALAKLASTRKPGNNKSVIQETLAYPSI-------EGELMACVNRGRTWMDPIISILAGD 1312
D LA S R+ + V E L P++ + + W +P I L
Sbjct: 1493 DRLANFGSKREMAPS-DVFVEHLYTPTVPHKDTTQDADTHDVALVEADWREPFIRFLTSQ 1551
Query: 1313 PAEVEQCTKEQ-QREASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVCASHI 1371
++ E+ R + Y + + LY++ S L +CVS E+ ++ ++H G+C +H
Sbjct: 1552 ELPQDKDEAERISRRSKLYAMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHA 1611
Query: 1372 GGRSLACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPFAMWG 1431
R++ K R GF+WPT D V+ C+ CQ FA P +EL T+ WPFA+WG
Sbjct: 1612 AARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWG 1671
Query: 1432 VDLVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFGIPRAIV 1491
+D+VGPF A + VA+D F+KWIEA+P+ IT+ +F+ IV RFG+P I+
Sbjct: 1672 LDMVGPFKKAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRII 1730
Query: 1492 SDNGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRR----RLAEAK 1547
+DNGTQF+ ++FC++ GI++ +ASV HP +NGQVE AN +IL+G++ RL
Sbjct: 1731 TDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYA 1790
Query: 1548 GAWLDELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEENQANM 1607
G W+ +LP+VLWS TT T ++PF + YG +AMLP E++ + R R EE + +
Sbjct: 1791 GKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRFRNFREERYEEDR 1850
Query: 1608 AVELDLLSETRDEAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVL-KWRSGAPGNKLTPN 1666
+L L E R+ A IR Q + N VR R VGDLVL K ++ +KL+P
Sbjct: 1851 VDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTRDRHKLSPL 1910
Query: 1667 WEGPYRIVKVLGNGAYHLEELDGRRLPRSFNGLSLRYFYS 1706
WEGP+ I +V G+Y L+ DG + S+N LR FY+
Sbjct: 1911 WEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 1950
>ref|XP_473950.1| OSJNBa0053K19.16 [Oryza sativa (japonica cultivar-group)]
gi|38344177|emb|CAE03508.2| OSJNBa0053K19.16 [Oryza
sativa (japonica cultivar-group)]
Length = 2010
Score = 917 bits (2371), Expect = 0.0
Identities = 583/1718 (33%), Positives = 868/1718 (49%), Gaps = 154/1718 (8%)
Query: 30 SREADSVAEFRPFSEDVENVAIPDNMKTLVLDSYSGDSDPKDHLLYFNTKMVIIAASDAV 89
+R D + F++D+ V P K ++ Y G ++P+ L + + +
Sbjct: 406 NRHDDDLDGVAAFTDDLRRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKA 465
Query: 90 KCRMFPSTFKSTAMAWFTTLPRGSISNFRDFSSKFLVQFSANKNQPVTINDLYNIRQQEG 149
P +A +W LPRG+I ++ + F+ F +P T DLYN+ Q+ G
Sbjct: 466 MANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSG 525
Query: 150 ESLKEYMARYSAASVKVEDEEPRACALAFKNGLLPGGLNSKLTRKPARSMGEMRARASTY 209
ESL++Y+ R+S K+ D AF G+ L K RKP ++ M +A+ Y
Sbjct: 526 ESLRDYIRRFSEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPMTVKLMFEKANEY 585
Query: 210 ILDEEDDAFKRKRAKLEKGDTSPKRVKKDRSGEDKGDGKQQRPGKGKSVFKPTKEQLYPR 269
AK E T+ K+ G + KG
Sbjct: 586 -------------AKAEDAVTASKQ-----------SGPSWKQNKGTPA----------- 610
Query: 270 RDDYEQRRPWQSKSHRQREETDMVMNTDVSDMLRGASDANLVDEPEAPKYQPRDANPKKW 329
S +H+ R+ + S R S N D+ +
Sbjct: 611 ------TGGGGSNNHKDRKRKPAELVATASHSSRQRSRVNTFDKIMNSQ----------- 653
Query: 330 CEFHRSAGHDTDDCRTLQREIDKLIRAGYQGNRQGQWRNGGDQNKAHKREEERADTKGKK 389
C H ++ H DC ++ D+ + R D+ ++ R+++ DT
Sbjct: 654 CSHHPNSNHVAKDCFVYKQFADQYTKTA---------RKNSDEEQSTSRKKDDGDTPAG- 703
Query: 390 KQESAAIATKGADDTFAQHSGPPVGTINTIAGGFGGGGDTHAARKRHV--RAVNSVH--- 444
F H +N I FGG + RK+ + R +N+V
Sbjct: 704 ---------------FQDHRKE----LNHI---FGGPLAYESKRKQKLTEREINAVQPDT 741
Query: 445 -------EVAFGFV---HPDITISMADFEGIKPHKDDPIVVQLRMNSFNVRRVLLDQGSS 494
E+A F HPD + + P+V+ + + +RR L+D GS+
Sbjct: 742 PQYLRWSEIAIKFDRSDHPDRVVHPGRY---------PLVLDPVVRNVKLRRTLIDGGSA 792
Query: 495 ADIIYGDAFDKLGLTDNDL----TPYAGTLVGFAGEQVMVRGYIDLDTIFGEDECARVLK 550
+I++ D + + ++L P+ G + G + + G I L FG E R
Sbjct: 793 LNILFAKTLDDMQIPHSELKPSNAPFHGVIPGLSATPL---GQITLPVTFGTRENFRTEN 849
Query: 551 VRYLVLQVVASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGKLKVDQKMARECYNN 610
+ + V +Y+ I+GR L + AV ++ +K P G V L+ D K A C
Sbjct: 850 ISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRG-VLSLRSDIKQAVTCDKE 908
Query: 611 CLNFYGKKSALVGHRCYEIEASDENLDPRGEGRVNRPTPIEETKALKFGDRTLKIGTRLT 670
+ + + A+ + GE + + E++A +T KI +
Sbjct: 909 SCDMAQTREMASAREDIRLAAATAS---EGEEPATKISKSGESEA-----KTKKIPLDPS 960
Query: 671 EEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHRLALNPSVKPVSQLRRRLGGDKGKA 730
+ +T N D+FAW DMPGI I H L + KP+ Q RR D+ A
Sbjct: 961 DPAKT------ANNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDA 1014
Query: 731 VQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKWRMCVDYTDLNKACPKDSYPLPSID 790
+++E+ KLLAA FI+EV +P WLAN V+V+K G+WRMCVDYTDLNK+CPKD + LP ID
Sbjct: 1015 IKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRID 1074
Query: 791 SLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMPFGLKNAGATYQ 850
+VD +G ELLS +D YSGYHQIR+ +D KT+F+T YCY TMPFGLKNAGATYQ
Sbjct: 1075 QVVDSTAGRELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQ 1134
Query: 851 RLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMRLNPEKCSFGVQ 910
R++ R F+ Q+GRN+E YVDD++VK+ + D DLEE F IR M+LNPEKC+FGV
Sbjct: 1135 RMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVP 1194
Query: 911 GGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRFLPQSGDRSFPF 970
GK +GFM++ RGI+ NPEK AI MK PS K+VQ+LTG +AALSRF+ + G+R PF
Sbjct: 1195 SGKLVGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPF 1254
Query: 971 FKCLRKNVAFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSDSALSSVMLQE 1030
FK L+K F+W E ++AF K+LL+ PP+L+ P PL LY + + +S+V++ E
Sbjct: 1255 FKLLKKTDNFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVE 1314
Query: 1031 IDGE------HRIVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPYFQSFPVKVRTDL 1084
+ E R +YFVS L ++ RY +++K +L+T R+L YFQ V V T
Sbjct: 1315 REEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF 1374
Query: 1085 PLRQVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELT---PDRFERVDT 1141
PL +L + +GR+ W++EL + + R ++ +Q+LADFV E T D
Sbjct: 1375 PLGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVAEWTECQEDTPAENME 1434
Query: 1142 QWTLFVDGSSNSSGSGAGVTLEGPGELVLEQSLKFEFKATNNQAEYEALIAGLKLAREVK 1201
WT+ DGS SG+GAGV L P L L F A++N AEYEAL+ GL++A +
Sbjct: 1435 HWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLG 1494
Query: 1202 IRSLLIRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVVEYVPRAENQRADA 1261
I+ L++R DSQLV NQV + D N++ Y + VR L F + + +V R N+ AD
Sbjct: 1495 IKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADR 1554
Query: 1262 LAKLASTRKPGNNKSVIQETLAYPSIEGELMACVNRGR-------TWMDPIISILAGDPA 1314
LA S R+ + V E L P++ + V W +P+I L
Sbjct: 1555 LANFGSKREVAPS-DVFVEHLYTPTVPHKDTTQVAGTHDVAMVETDWREPLIRFLTSQEL 1613
Query: 1315 EVEQCTKEQ-QREASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVCASHIGG 1373
++ E+ R + Y + + LY++ S L +CVS E+ ++ ++H G+C +H
Sbjct: 1614 PQDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLQDIHSGICGNHAAA 1673
Query: 1374 RSLACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPFAMWGVD 1433
R++ K R GF+WPT D V+ C+ CQ FA P +EL T+ WPFA+WG+D
Sbjct: 1674 RTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLD 1733
Query: 1434 LVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFGIPRAIVSD 1493
+VGPF A + VA+D F+KWIEA+P+ IT+ +F+ IV RFG+P I++D
Sbjct: 1734 MVGPFKKAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITD 1792
Query: 1494 NGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRR----RLAEAKGA 1549
NGTQF+ ++FC++ GI++ +ASV HP +NGQVE AN +IL+G++ RL G
Sbjct: 1793 NGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGK 1852
Query: 1550 WLDELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEENQANMAV 1609
W+ +LP+VLWS TT T ++PF + YG +AMLP E++ + R R EE + +
Sbjct: 1853 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRFRNFREERYEEDRVD 1912
Query: 1610 ELDLLSETRDEAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVL-KWRSGAPGNKLTPNWE 1668
+L L E R+ A IR Q + N VR R VGDLVL K ++ +KL+P WE
Sbjct: 1913 DLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTRDRHKLSPLWE 1972
Query: 1669 GPYRIVKVLGNGAYHLEELDGRRLPRSFNGLSLRYFYS 1706
GP+ I +V G+Y L+ DG + S+N LR FY+
Sbjct: 1973 GPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 2010
>gb|AAD11615.1| prpol [Zea mays] gi|7489805|pir||T14595 polyprotein - maize
retrotransposon Cinful-1
Length = 1317
Score = 917 bits (2371), Expect = 0.0
Identities = 512/1306 (39%), Positives = 760/1306 (57%), Gaps = 35/1306 (2%)
Query: 424 GGGGDTHAARKRHVRAVNSVHEVAFG-------FVHPDITISMADFEGIKPHKDDPIVVQ 476
GG A +K+ A V V + H IT S D + +D +V+
Sbjct: 22 GGSSSEPANKKQKKEAQRRVQHVGVQGPFIKSRWSHIPITFSQEDLQLKDYPHNDAMVIS 81
Query: 477 LRMNSFNVRRVLLDQGSSADIIYGDAFDKLGLTDNDLTPYAGTLVGFAGEQVMVRGYIDL 536
+ F V VL+D GS+ADII+ AF ++ ++ + L GF G Q++ G I +
Sbjct: 82 CVIKGFLVHNVLVDTGSAADIIFAKAFRQMQELEDKIHDATHPLCGFGGRQIVALGKITM 141
Query: 537 DTIFGEDECARVLKVRYLVLQVVASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGK 596
FG R +V + ++ + YN IIGR TLN A++ A+L +K P G +
Sbjct: 142 SVTFGFINNTRTEQVVFDIVDMEYPYNAIIGRGTLNAFEAILHPAYLCMKMPSDQGPIA- 200
Query: 597 LKVDQKMARECYNNCLNFYGKKSALVGHRCYEIEASDENLDPRGEGRVNRPTPIEETKAL 656
+ Q+ AR N + A+ H EA E R E + P
Sbjct: 201 IHGSQEAARRAEGN----WTDSKAI--HNIDGAEAC-EXYKFRREKAASADQPKPMLLCE 253
Query: 657 KFGDRTLKIGTRLTEEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHRLALNPSVKPV 716
++ + +G++L+EEQE L + L N D+FAWS D+ G++ + I H L ++PS +P
Sbjct: 254 DIAEQKVLLGSQLSEEQEKTLIRFLFNNKDVFAWSANDLCGVNRDVIEHSLNVDPSFRPR 313
Query: 717 SQLRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKWRMCVDYTDLN 776
Q R++ DK + + EV +LL+A IREVKYP WLAN VMVKKANGKWRMC+D+TDLN
Sbjct: 314 KQRLRKMSDDKAEGARNEVKRLLSAGVIREVKYPEWLANTVMVKKANGKWRMCIDFTDLN 373
Query: 777 KACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYR 836
KACPKD +PLP IDSLVD + +EL+SL+D YSGYHQI M DE KT+F+T YCY
Sbjct: 374 KACPKDEFPLPRIDSLVDATASSELMSLLDCYSGYHQIWMKREDEPKTSFITPSGTYCYL 433
Query: 837 TMPFGLKNAGATYQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKH 896
MP GLKNAG ++ R+ +V Q+GRN+ YVDD+IVKS + +H DL+E F R+
Sbjct: 434 RMPEGLKNAGGSFSRMTAKVLQSQIGRNVLTYVDDIIVKSTKQENHIADLQETFASFRQA 493
Query: 897 SMRLNPEKCSFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAAL 956
++LNPEKC FGV+ GKFLG +++++GIE NP K +AI +M+ P+ K QRLTGR+A+L
Sbjct: 494 GLKLNPEKCVFGVKKGKFLGCLVSTKGIEANPSKIEAILRMEPPTTKKGAQRLTGRLASL 553
Query: 957 SRFLPQSGDRSFPFFKCLRKNVAFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYF 1016
+RF+ +S +R+ PFF+ L+ F+W ++AF LK+ L L+ P+ G PL LY
Sbjct: 554 NRFISRSAERNLPFFEVLKSAEVFQWGPIQQKAFEELKQYLIDLTALTPPMPGAPLLLYV 613
Query: 1017 AVSDSALSSVMLQE-IDGEHR---IVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPY 1072
A S SA+S+ ++QE +DG+ R VYFVS L ++ Y ++EK VL+ +R+LR Y
Sbjct: 614 AASHSAVSAALVQEKLDGQTRKQVPVYFVSEVLSISKKNYTELEKVLYVVLMASRKLRHY 673
Query: 1073 FQSFPVKVRTDLPLRQVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELT 1132
FQ++ + V + PL+ +++ + +GR+ W+ EL+E+ ++Y R ++ +Q+LADF+ + T
Sbjct: 674 FQAYNIIVPSSQPLKDIMRNREATGRIGKWAAELNEFCIEYVHRSSIQSQALADFIADWT 733
Query: 1133 PDRFE---RVDTQ-WTLFVDGSSNSSGSGAGVTLEGPGELVLEQSLKFEFKATNNQAEYE 1188
P E DT+ WT+F DGS + G+GA L P ++ K +F TNN AEYE
Sbjct: 734 PGAQEEEANKDTEAWTVFCDGSWGTFGAGAAAVLVSPSKVKTCYVAKLDFSCTNNIAEYE 793
Query: 1189 ALIAGLKLAREVKIRSLLIRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVV 1248
AL+ GL+ + + IR +++TDSQ+V + + + KDP L KYL+ VR + F+ V
Sbjct: 794 ALLLGLRKLKAMGIRRAVLKTDSQVVSGHIDKSCKAKDPKLEKYLDMVRRVEASFEGFSV 853
Query: 1249 EYVPRAENQRADALAKLASTRKPGNNKSVIQETLAYPSIEGELMACVN----RGRTWMDP 1304
+ +PR +N+ AD LAK A+ P V ET+ PS+E A +N W
Sbjct: 854 KNIPRGQNEHADLLAKSAAQGLP-LPSDVFFETIKAPSVELLERAVLNISPVYSEDWRTE 912
Query: 1305 IISILAGD-PAEVEQCTKEQQREASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVH 1363
IIS L G ++ E + + A Y +I+G LY+ G PLLKC+S + +M E+H
Sbjct: 913 IISYLQGKFLSDDEAYNRRIEARARPYVMIEGELYKHGVCAPLLKCLSRTEGIELMKEIH 972
Query: 1364 EGVCASHIGGRSLACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSA 1423
G+C SHIG R L K+ R GFYWP D + V++C+ CQ A K P +
Sbjct: 973 AGLCGSHIGSRPLLGKIFRQGFYWPKAASDAAELVQKCEGCQKCARDQKQPSSLTQLIQP 1032
Query: 1424 PWPFAMWGVDLVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCR 1483
WP WG+DL+GP P A+ +++++VAV+YF+KWIEA+PLA ITSA + F+W+ IVCR
Sbjct: 1033 IWPLQRWGLDLLGPLPPAQGNLRYVVVAVEYFSKWIEAKPLATITSATVQKFFWQNIVCR 1092
Query: 1484 FGIPRAIVSDNGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRRRL 1543
FG+P+AI DNGTQF S R+FC ++G ++ FASV HP++NG VE AN +I+ G+ + +
Sbjct: 1093 FGVPKAITVDNGTQFDSEAFRDFCDQIGTKIHFASVRHPESNGLVERANGIIMTGIMKSI 1152
Query: 1544 -AEAKGAWLDELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEE 1602
+ +G W D+L V+WS+NTT +T TPF++ +G +A+ P E + R
Sbjct: 1153 FNQPRGKWPDQLTKVVWSHNTTTSRSTGFTPFKLLFGDEAITPEEAKTGSIRVVASAASG 1212
Query: 1603 NQANMAVELDLLSETRDEAHIRETAMKQRVAAKFNSR-VRVRDMQVGDLVLKWRSGAPG- 1660
++A+ +VE D L R +A + Q K+ R VR+++++ + R P
Sbjct: 1213 SEADYSVEKDALEGIRLQA-VENINKYQAETIKWRDRKVRLKNIEPDTWCFR-RVANPET 1270
Query: 1661 -NKLTPNWEGPYRIVKVLGNGAYHLEELDGRRLPRSFNGLSLRYFY 1705
KL W+GP+ + G+Y L+++DG +PRS+N LR +Y
Sbjct: 1271 VGKLQLKWDGPFLVASSSRPGSYRLKDMDGNDIPRSWNADELRRYY 1316
>gb|AAP53095.1| putative retroelement [Oryza sativa (japonica cultivar-group)]
gi|37533012|ref|NP_920808.1| putative retroelement [Oryza
sativa (japonica cultivar-group)]
gi|19881590|gb|AAM00991.1| Putative retroelement [Oryza
sativa]
Length = 2017
Score = 914 bits (2361), Expect = 0.0
Identities = 585/1718 (34%), Positives = 868/1718 (50%), Gaps = 156/1718 (9%)
Query: 31 READSVAEFRPFSEDVENVAIPDNMKTLVLDSYSGDSDPKDHLLYFNTKMVIIAASDAVK 90
R D + F++D+ V P K ++ Y G ++P+ L + +
Sbjct: 414 RHDDDLDGVAAFTDDLRRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDSKAM 473
Query: 91 CRMFPSTFKSTAMAWFTTLPRGSISNFRDFSSKFLVQFSANKNQPVTINDLYNIRQQEGE 150
P +A +W LPRG+I ++ + F+ F +P T DLYN+ Q+ GE
Sbjct: 474 ANYLPVALADSARSWLHGLPRGTIESWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGE 533
Query: 151 SLKEYMARYSAASVKVEDEEPRACALAFKNGLLPGGLNSKLTRKPARSMGEMRARASTYI 210
SL++Y+ R+S K+ D AF G+ L K RKP R++ M +A+ Y
Sbjct: 534 SLRDYIRRFSEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFEKANEY- 592
Query: 211 LDEEDDAFKRKRAKLEKGDTSPKRVKKDRSGEDKGDGKQQRPGKGKSVFKPTKEQLYPRR 270
AK E T+ K+ G +P KG
Sbjct: 593 ------------AKAEDAVTASKQ-----------SGPSWKPNKGTPA------------ 617
Query: 271 DDYEQRRPWQSKSHRQREETDMVMNTDVSDMLRGASDANLVDEPEAPKYQPRDANPKKWC 330
S +H+ R+ + + R S N D+ + C
Sbjct: 618 -----TGGGGSNNHKDRKRKPEELVATATHSSRQRSRVNTFDKIMNSQ-----------C 661
Query: 331 EFHRSAGHDTDDCRTLQREIDKLIRAGYQGNRQGQWRNGGDQNKAHKREEERADTKGKKK 390
H ++ H DC ++ ++ + R D+ ++ R+++ DT
Sbjct: 662 PHHPNSNHVAKDCFVYKQFAEQYTKTT---------RKNSDEEQSTSRKKDDGDTPAG-- 710
Query: 391 QESAAIATKGADDTFAQHSGPPVGTINTIAGGFGGGGDTHAARKRHV--RAVNSVH---- 444
F H +N I FGG + RK+ + R +N+V
Sbjct: 711 --------------FQDHRKE----LNHI---FGGPLAYESKRKQKLTEREINAVQPDTP 749
Query: 445 ------EVAFGFV---HPDITISMADFEGIKPHKDDPIVVQLRMNSFNVRRVLLDQGSSA 495
E+A F HPD + + P+V+ + + +RR L+D GS+
Sbjct: 750 QYLRWSEIAIKFDRSDHPDRVVHPGRY---------PLVLDPVVRNVKLRRTLIDGGSAL 800
Query: 496 DIIYGDAFDKLGLTDNDL----TPYAGTLVGFAGEQVMVRGYIDLDTIFGEDECARVLKV 551
+I++ D + + ++L P+ G + G + + G I L FG E R +
Sbjct: 801 NILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL---GQITLPVTFGTRENFRTENI 857
Query: 552 RYLVLQVVASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGKLKVDQKMARECYNNC 611
+ V +Y+ I+GR L + AV ++ +K P G V L+ D K A C
Sbjct: 858 SFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKLPGPRG-VLSLRSDIKQAVTCDKES 916
Query: 612 LNFYGKKSALVGHRCYEIEASDENLDPRGEGRVNRPTPIEETKALKFGDRTLKIGTRLTE 671
+ + + A+ + EG V TK K G+ K +
Sbjct: 917 CDMAQTREMASAREDIRLAAATAS-----EGEV------PATKISKSGESEAKTKKIPLD 965
Query: 672 EQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHRLALNPSVKPVSQLRRRLGGDKGKAV 731
++ T N D+FAW DMPGI I H L + KP+ Q RR D+ A+
Sbjct: 966 PSDSTKT---ANNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAI 1022
Query: 732 QQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKWRMCVDYTDLNKACPKDSYPLPSIDS 791
++E+ KLLAA FI+EV +P WLAN V+V+K G+WRMCVDYTDLNK CPKD + LP ID
Sbjct: 1023 KEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKCCPKDPFGLPRIDQ 1082
Query: 792 LVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMPFGLKNAGATYQR 851
+VD +G ELLS +D YSGYHQIR+ +D KT+F+T YCY TMPFGLKNAGATYQR
Sbjct: 1083 VVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQR 1142
Query: 852 LMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMRLNPEKCSFGVQG 911
++ R F+ Q+GRN+E YVDD++VK+ + D DLEE F IR M+LNPEKC+FGV
Sbjct: 1143 MIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPS 1202
Query: 912 GKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRFLPQSGDRSFPFF 971
GK LGFM++ RGI+ NPEK AI MK PS K+VQ+LTG +AALSRF+ + G+R PFF
Sbjct: 1203 GKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFF 1262
Query: 972 KCLRKNVAFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSDSALSSVML--Q 1029
K L+K F W E ++AF K+LL+ PP+L+ P PL LY + + +S+V++ +
Sbjct: 1263 KLLKKTDDFHWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVER 1322
Query: 1030 EIDGE----HRIVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPYFQSFPVKVRTDLP 1085
E DG R +YFVS L ++ RY +++K +L+T R+L YFQ V V T P
Sbjct: 1323 EEDGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHLVTVVTSFP 1382
Query: 1086 LRQVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELTPDR----FERVDT 1141
L +L + +GR+ W++EL + + R ++ +Q+LADFV E T + E+V+
Sbjct: 1383 LGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVAEWTECQEDTPAEKVE- 1441
Query: 1142 QWTLFVDGSSNSSGSGAGVTLEGPGELVLEQSLKFEFKATNNQAEYEALIAGLKLAREVK 1201
WT+ DGS SG+GAGV L P L L F A++N AEYEAL+ GL++A +
Sbjct: 1442 HWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLG 1501
Query: 1202 IRSLLIRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVVEYVPRAENQRADA 1261
I+ L++R DSQLV NQV + D N++ Y + VR L F + + +V R N+ AD
Sbjct: 1502 IKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNKAADR 1561
Query: 1262 LAKLASTRKPGNNKSVIQETLAYPSIEGELMACVNRGR-------TWMDPIISILAGDPA 1314
LA S R+ + V E L P++ + V W +P+I L
Sbjct: 1562 LANFGSKREVAPS-DVFVEHLYAPTVPHKDTTQVAGTHDVAMVEADWREPLIRFLTSQEL 1620
Query: 1315 EVEQCTKEQ-QREASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVCASHIGG 1373
++ E+ R + Y + + LY++ S L +CVS E+ ++ ++H G+C +H
Sbjct: 1621 PQDKDEAERISRRSRLYVMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAA 1680
Query: 1374 RSLACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPFAMWGVD 1433
R++ K R GF+WPT D V+ C+ CQ FA P +EL T+ WPFA+WG+D
Sbjct: 1681 RTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLD 1740
Query: 1434 LVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFGIPRAIVSD 1493
+VGPF A + VA+D F+KWIEA+P+ IT+ +F+ IV RFG+P I++D
Sbjct: 1741 MVGPFKKAFGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITD 1799
Query: 1494 NGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRR----RLAEAKGA 1549
NG QF+ ++FC++ GI++ +ASV HP +NGQVE AN +IL+G++ RL G
Sbjct: 1800 NGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGK 1859
Query: 1550 WLDELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEENQANMAV 1609
W+++LP+VLWS TT T ++PF + YG +AMLP E++ + R R EE + +
Sbjct: 1860 WVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRFRNFREERYEEDRVD 1919
Query: 1610 ELDLLSETRDEAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVL-KWRSGAPGNKLTPNWE 1668
+L L E R+ A I+ Q + N VR R VGDLVL K ++ +KL+P WE
Sbjct: 1920 DLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTRDRHKLSPLWE 1979
Query: 1669 GPYRIVKVLGNGAYHLEELDGRRLPRSFNGLSLRYFYS 1706
GP+ I +V G+Y L+ DG + S+N LR FY+
Sbjct: 1980 GPFIISEVTRPGSYRLKREDGTLIDNSWNIEHLRRFYA 2017
>dbj|BAD18986.1| GAG-POL precursor [Vitis vinifera]
Length = 1027
Score = 912 bits (2356), Expect = 0.0
Identities = 460/1031 (44%), Positives = 656/1031 (63%), Gaps = 25/1031 (2%)
Query: 695 MPGIDPNFICHRLALNPSVKPVSQLRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLA 754
M GI P+ HRL + + +PV Q RR D+ + ++ E+DKLL A FIREV YP WLA
Sbjct: 1 MKGIHPSITSHRLNVVSTARPVRQRIRRFHPDRQRVIRNEIDKLLEAGFIREVSYPDWLA 60
Query: 755 NVVMVKKANGKWRMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQI 814
NVV+V K GKWR+CVDYT+LN ACPKDS+PLP ID +VD SG +LS +DA+SGYHQI
Sbjct: 61 NVVVVPKKEGKWRVCVDYTNLNNACPKDSFPLPRIDQIVDSTSGQGMLSFLDAFSGYHQI 120
Query: 815 RMHPADEDKTAFMTARVNYCYRTMPFGLKNAGATYQRLMDRVFAGQVGRNMEVYVDDMIV 874
M P DE+K AF+T YCY+ MPFGLKNAGATYQRLM ++F +G ++EVY+DD++V
Sbjct: 121 PMSPDDEEKIAFITPHDLYCYKVMPFGLKNAGATYQRLMTKIFKPLIGHSVEVYIDDIVV 180
Query: 875 KSVRGLDHHQDLEEAFGEIRKHSMRLNPEKCSFGVQGGKFLGFMITSRGIEINPEKCKAI 934
KS H L+E F +R++ M+LNP KC+FGV KFLGFM++ RGIE++P++ KA+
Sbjct: 181 KSKTREQHILHLQEVFYLLRRYGMKLNPSKCAFGVSARKFLGFMVSQRGIEVSPDQVKAV 240
Query: 935 QQMKSPSNVKEVQRLTGRIAALSRFLPQSGDRSFPFFKCLRKNVAFEWTAECEEAFVRLK 994
+ P N KE+QRLTG++ AL RF+ + D PFF +RK WT C+ A R+K
Sbjct: 241 METPPPRNKKELQRLTGKLVALGRFIARFIDELRPFFLAIRKAGTHGWTDNCQNALERIK 300
Query: 995 ELLSSPPILSKPIQGHPLHLYFAVSDSALSSVMLQ-EIDGEHRIVYFVSHTLQGAEVRYQ 1053
L PPILS PI L++Y AVS+ A+S+V+ + E + +Y+VS L E RY
Sbjct: 301 HYLMQPPILSSPIPKEKLYMYLAVSEWAISAVLFRCPSPKEQKPIYYVSRALADVETRYS 360
Query: 1054 KIEKAALAVLVTARRLRPYFQSFPVKVRTDLPLRQVLQKPDLSGRLVAWSVELSEYGLQY 1113
K+E +LA+ A++LRPYFQ+ PV V TD PLR +L KPDL+GR++ W++ELSE+G+++
Sbjct: 361 KMELISLALRSAAQKLRPYFQAHPVIVLTDQPLRNILHKPDLTGRMLQWAIELSEFGIEF 420
Query: 1114 DKRGTVGAQSLADFVVELT--PDRFE--RVDTQWTLFVDGSSNSSGSGAGVTLEGPGELV 1169
R ++ Q +ADFV+E + P + E R WTL VDG+S SSGSG G+ L+ P
Sbjct: 421 QPRLSMKGQVMADFVLEYSRKPGQHEGSRKKEWWTLRVDGASRSSGSGVGLLLQSPTGEH 480
Query: 1170 LEQSLKFEFKATNNQAEYEALIAGLKLAREVKIRSLLIRTDSQLVENQVKGTFQVKDPNL 1229
LEQ+++ F A+NN+AEYEA+++GL LA + + L I +DSQLV V+ ++ KD +
Sbjct: 481 LEQAIRLGFSASNNEAEYEAILSGLDLALALSVSKLRIFSDSQLVVKHVQEEYEAKDARM 540
Query: 1230 IKYLERVRYLMTLFQEVVVEYVPRAENQRADALAKLASTRKPGNNKSVIQETLAYPSIEG 1289
+YL +VR + F E +E + RA+N+RADALA +A++ + PS+
Sbjct: 541 ARYLAKVRNTLQQFTEWTIEKIKRADNRRADALAGIAASLSIKEAILLPIHVQTNPSV-S 599
Query: 1290 ELMACVNR------GRTWMDPI-----ISILAGDPAEVEQCTKEQQREASHYTLIDGHLY 1338
E+ C + WM+ I L GDP + + + +A+ +TLI GHLY
Sbjct: 600 EISICSTTEAPQADDQEWMNDITEYIRTGTLPGDPKQAHKV----RVQAARFTLIGGHLY 655
Query: 1339 RRGFSTPLLKCVSPEKYEAIMSEVHEGVCASHIGGRSLACKVLRAGFYWPTLRKDCMDFV 1398
+R F+ P L+C+ + + +++E+HEG+ +H GGRSLA + G+YWPT++K+ +V
Sbjct: 656 KRSFTGPYLRCLGHSEAQYVLAELHEGIYGNHSGGRSLAHRAHSQGYYWPTMKKEAAAYV 715
Query: 1399 KQCKECQVFADLSKAPPKELVTMSAPWPFAMWGVDLVGPFPTARAQMKFILVAVDYFTKW 1458
K+C +CQ +A + P L ++S PWPFA WG+D+V P PTA AQ KF+LVA DYF+KW
Sbjct: 716 KRCDKCQRYAPIPHMPSTTLKSISGPWPFAQWGMDIVRPLPTAPAQKKFLLVATDYFSKW 775
Query: 1459 IEAEPLAKITSAKIVNFYWKRIVCRFGIPRAIVSDNGTQFSSSQTREFCKEMGIQMRFAS 1518
+EAE A + F WK I+CRFGIP+ I++DNG QF S R FC E+ I+ +++
Sbjct: 776 VEAEAYASTKDKDVTKFVWKNIICRFGIPQTIIADNGPQFDSIAFRNFCSELNIRNSYST 835
Query: 1519 VEHPQTNGQVESANRVILRGLRRRLAEAKGAWLDELPAVLWSYNTTEQSTTRETPFRMTY 1578
+PQ+NGQ E+ N+ ++ L++RL +AKG W++ELP VLW+Y TT T TPF + Y
Sbjct: 836 PRYPQSNGQAEATNKTLITALKKRLEQAKGKWVEELPGVLWAYRTTPGRPTGNTPFALAY 895
Query: 1579 GVDAMLPVEIDNFTWRTRPGFEEENQANMAVELDLLSETRDEAHIRETAMKQRVAAKFNS 1638
G+DA++P+EI T T + + + LD E R+ A IR +QR +A +N
Sbjct: 896 GMDAVIPIEIGLPTIWTNAAKQSDANMQLGRNLDWTDEVRESASIRMADYQQRASAHYNR 955
Query: 1639 RVRVRDMQVGDLVLKW----RSGAPGNKLTPNWEGPYRIVKVLGNGAYHLEELDGRRLPR 1694
+VR R ++ G LVL+ + K NWEGPY + K NGAYHL++LDG L R
Sbjct: 956 KVRPRSLKNGTLVLRKFFENTTEVGAGKFQANWEGPYIVSKASDNGAYHLQKLDGTPLLR 1015
Query: 1695 SFNGLSLRYFY 1705
+N +L+ +Y
Sbjct: 1016 PWNVSNLKQYY 1026
>ref|XP_470757.1| putative gag-pol precursor [Oryza sativa] gi|18071370|gb|AAL58229.1|
putative gag-pol precursor [Oryza sativa]
Length = 2026
Score = 909 bits (2350), Expect = 0.0
Identities = 588/1724 (34%), Positives = 867/1724 (50%), Gaps = 168/1724 (9%)
Query: 31 READSVAEFRPFSEDVENVAIPDNMKTLVLDSYSGDSDPKDHLLYFNTKMVIIAASDAVK 90
R D + F++D+ V P K ++ Y G ++P+ L + +
Sbjct: 414 RHDDDLDGVAAFTDDLRRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDSKAM 473
Query: 91 CRMFPSTFKSTAMAWFTTLPRGSISNFRDFSSKFLVQFSANKNQPVTINDLYNIRQQEGE 150
P +A +W LPRG+I ++ + F+ F +P T DLYN+ Q+ GE
Sbjct: 474 ANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTQFDLYNVVQKSGE 533
Query: 151 SLKEYMARYSAASVKVEDEEPRACALAFKNGLLPGGLNSKLTRKPARSMGEMRARASTYI 210
SL++Y+ R+S K+ D AF G+ L K RKP R++ M +A+ Y
Sbjct: 534 SLRDYIRRFSEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFEKANEY- 592
Query: 211 LDEEDDAFKRKRAKLEKGDTSPKRVKKDRSGEDKGDGKQQRPGKGKSVFKPTKEQLYPRR 270
AK E T+ K+ SG K+ P G K++ R+
Sbjct: 593 ------------AKAEDAVTASKQ-----SGPS-WKPKKDTPATGGGGSNNHKDR--KRK 632
Query: 271 DDYEQRRPWQSKSHRQREET-DMVMNTDVSDMLRGASDANLVDEPEAPKYQPRDANPKKW 329
+ S R R T D +MN+
Sbjct: 633 PEELVATAIHSSRQRSRVNTFDKIMNSQ-------------------------------- 660
Query: 330 CEFHRSAGHDTDDCRTLQREIDKLIRAGYQGNRQGQWRNGGDQNKAHKREEERADTKGKK 389
C H ++ H DC ++ ++ + R D+ ++ R+++ DT
Sbjct: 661 CPHHPNSNHVAKDCFVYKQFAEQYTKTT---------RKNSDEEQSTSRKKDDGDT---- 707
Query: 390 KQESAAIATKGADDTFAQHSGPPVG------TINTIAGGFGGGGDTHAARKRHV--RAVN 441
PVG +N I FGG + RK+ + R +N
Sbjct: 708 ----------------------PVGFQDHRKELNHI---FGGPLAYESKRKQKLTEREIN 742
Query: 442 SVH----------EVAFGFV---HPDITISMADFEGIKPHKDDPIVVQLRMNSFNVRRVL 488
+V E+A F HPD + + P+V+ + + +RR L
Sbjct: 743 AVQPDTPQYLRWSEIAIKFDRSDHPDRVVHPGRY---------PLVLDPVVRNVKLRRTL 793
Query: 489 LDQGSSADIIYGDAFDKLGLTDNDL----TPYAGTLVGFAGEQVMVRGYIDLDTIFGEDE 544
+D GS+ +I++ D + + ++L P+ G + G + + G I L FG E
Sbjct: 794 IDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL---GQITLPVTFGTRE 850
Query: 545 CARVLKVRYLVLQVVASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGKLKVDQKMA 604
R + + V +Y+ I+GR L + AV ++ +K P G V L+ D K A
Sbjct: 851 NFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRG-VLSLRSDIKQA 909
Query: 605 RECYNNCLNFYGKKSALVGHRCYEIEASDENLDPRGEGRVNRPTPIEETKALKFGDRTLK 664
C + + + A+ + EG V TK K G+ K
Sbjct: 910 VTCDKESCDMAQTREMASAREDIRLAAATAS-----EGEV------PATKTSKSGESEAK 958
Query: 665 IGTRLTEEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHRLALNPSVKPVSQLRRRLG 724
T+ + TK N D+FAW DMPGI I H L + KP+ Q RR
Sbjct: 959 --TKKIPLDPSNPTKT-ANNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFA 1015
Query: 725 GDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKWRMCVDYTDLNKACPKDSY 784
D+ A+++E+ KLLAA FI+EV +P WLAN V+V+K G+WRMCVDYTDLNK+CPKD +
Sbjct: 1016 QDRKDAIKEELTKLLAAGFIKEVHHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPF 1075
Query: 785 PLPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMPFGLKN 844
LP ID +VD +G ELLS +D YSGYHQIR+ +D KT+F+T YCY TMPFGLKN
Sbjct: 1076 GLPRIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKN 1135
Query: 845 AGATYQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMRLNPEK 904
AGATYQR++ R F+ Q+GRN+E YVDD++VK+ + D DLEE F IR M+LNPEK
Sbjct: 1136 AGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEK 1195
Query: 905 CSFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRFLPQSG 964
C+FGV GK LGFM++ RGI+ NPEK AI MK PS K+VQ+LTG +AALSRF+ + G
Sbjct: 1196 CTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLG 1255
Query: 965 DRSFPFFKCLRKNVAFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSDSALS 1024
+R PFFK L+K F+W E ++AF K+LL+ PP+L+ P PL LY + + +S
Sbjct: 1256 ERGMPFFKLLKKTDDFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVS 1315
Query: 1025 SVMLQEIDGE------HRIVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPYFQSFPV 1078
+V++ E + E R +YFVS L ++ RY +++K +L+T R+L YFQ V
Sbjct: 1316 TVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSV 1375
Query: 1079 KVRTDLPLRQVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELT---PDR 1135
V T PL +L + +GR+ W++EL + + R ++ +Q+LADFV E T D
Sbjct: 1376 TVVTSFPLGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVAEWTECQEDT 1435
Query: 1136 FERVDTQWTLFVDGSSNSSGSGAGVTLEGPGELVLEQSLKFEFKATNNQAEYEALIAGLK 1195
WT+ DGS SG+GAGV L P L L F A++N AEYEAL+ GL+
Sbjct: 1436 PAEKMEHWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLR 1495
Query: 1196 LAREVKIRSLLIRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVVEYVPRAE 1255
+A + I+ L++R DSQLV NQV + D N++ Y + VR L F + + +V R
Sbjct: 1496 IAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHN 1555
Query: 1256 NQRADALAKLASTRKPGNNKSVIQETLAYPSIEGELMACVNRGR-------TWMDPIISI 1308
N+ AD LA S R+ + V E L P++ + V W +P+I
Sbjct: 1556 NEAADRLANFGSKREVAPS-DVFVEHLYTPTVPHKDTTQVAGTHDVAMVEADWREPLIRF 1614
Query: 1309 LAGDPAEVEQCTKEQ-QREASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVC 1367
L ++ E+ R + Y + + LY++ S L +CVS E+ ++ ++H G+C
Sbjct: 1615 LTSQELPQDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGIC 1674
Query: 1368 ASHIGGRSLACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPF 1427
+H R++ K R GF+WPT D V+ C+ CQ FA P +EL T+ WPF
Sbjct: 1675 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPF 1734
Query: 1428 AMWGVDLVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFGIP 1487
A+WG+D+VGPF A + VA+D F+KWIEA+P+ IT+ +F+ IV RFG+P
Sbjct: 1735 AVWGLDMVGPFKKAVGGYTHLFVAIDKFSKWIEAKPVVTITADNAPDFF-INIVHRFGVP 1793
Query: 1488 RAIVSDNGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRR----RL 1543
I++DNG QF+ ++ C++ GI++ +ASV HP +NGQVE AN +IL+G++ RL
Sbjct: 1794 NRIITDNGRQFTGGVFKDCCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRL 1853
Query: 1544 AEAKGAWLDELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEEN 1603
G W+++LP+VLWS TT T ++PF + YG +AMLP E++ + R R EE
Sbjct: 1854 KPYAGKWVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRFRNFREERY 1913
Query: 1604 QANMAVELDLLSETRDEAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVL-KWRSGAPGNK 1662
+ + +L L E R+ A I+ Q + N VR R VGDLVL K ++ +K
Sbjct: 1914 EEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTRDRHK 1973
Query: 1663 LTPNWEGPYRIVKVLGNGAYHLEELDGRRLPRSFNGLSLRYFYS 1706
L+P WEGP+ I V G+Y L+ DG + S+N LR FY+
Sbjct: 1974 LSPLWEGPFIISAVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 2017
>gb|AAP54912.1| gag-pol precursor [Oryza sativa (japonica cultivar-group)]
gi|37536646|ref|NP_922625.1| gag-pol precursor [Oryza
sativa (japonica cultivar-group)]
gi|13876521|gb|AAK43497.1| gag-pol precursor [Oryza
sativa (japonica cultivar-group)]
Length = 2017
Score = 905 bits (2339), Expect = 0.0
Identities = 580/1719 (33%), Positives = 862/1719 (49%), Gaps = 158/1719 (9%)
Query: 31 READSVAEFRPFSEDVENVAIPDNMKTLVLDSYSGDSDPKDHLLYFNTKMVIIAASDAVK 90
R D + F++D+ V P K ++ Y G ++P+ L + +
Sbjct: 414 RHDDDLDGVAAFTDDLRRVDWPAGFKPTGIEKYDGTTNPESWLTIYGLAIRAAGGDSKAM 473
Query: 91 CRMFPSTFKSTAMAWFTTLPRGSISNFRDFSSKFLVQFSANKNQPVTINDLYNIRQQEGE 150
P +A +W LPRG+I ++ + F+ F P T DLYN+ Q+ GE
Sbjct: 474 ANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQGTFEHPGTQYDLYNVIQKSGE 533
Query: 151 SLKEYMARYSAASVKVEDEEPRACALAFKNGLLPGGLNSKLTRKPARSMGEMRARASTYI 210
SL++Y+ R+S K+ D AF G+ L K RKP +++ M +A+ Y
Sbjct: 534 SLRDYIRRFSEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPKTVKLMFEKANEY- 592
Query: 211 LDEEDDAFKRKRAKLEKGDTSPKRVKKDRSGED--KGDGKQQRPGKGKSVFKPTKEQLYP 268
AK E T+ K+ SG G + G G + K K
Sbjct: 593 ------------AKAEDAVTASKQ-----SGPSWKPNKGTPAKGGGGSNNHKDRKR---- 631
Query: 269 RRDDYEQRRPWQSKSHRQREETDMVMNTDVSDMLRGASDANLVDEPEAPKYQPRDANPKK 328
+ ++ S+ H + D +MN+
Sbjct: 632 KPEELVATATHSSRQHSRVNTFDKIMNSQ------------------------------- 660
Query: 329 WCEFHRSAGHDTDDCRTLQREIDKLIRAGYQGNRQGQWRNGGDQNKAHKREEERADTKGK 388
C H ++ H DC ++ ++ + R D+ ++ R+++ DT
Sbjct: 661 -CPHHPNSNHVAKDCFVYRQFAEQYTKTT---------RKNSDEEQSTSRKKDDGDTPAG 710
Query: 389 KKQESAAIATKGADDTFAQHSGPPVGTINTIAGGFGGGGDTHAARKRHV--RAVNSVH-- 444
F H +N I FGG + RK+ + R +N+V
Sbjct: 711 ----------------FQDHRKE----LNHI---FGGPLAYESKRKQKLTEREINAVQPD 747
Query: 445 --------EVAFGFV---HPDITISMADFEGIKPHKDDPIVVQLRMNSFNVRRVLLDQGS 493
E+A F HPD + + P+V+ + + +RR L+D GS
Sbjct: 748 TPQYLRWSEIAIKFDRSDHPDRVVHPGRY---------PLVLDPVVRNVKLRRTLIDGGS 798
Query: 494 SADIIYGDAFDKLGLTDNDL----TPYAGTLVGFAGEQVMVRGYIDLDTIFGEDECARVL 549
+ +I++ D + + ++L P+ G + G + + G I L FG E R
Sbjct: 799 ALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL---GQITLPVTFGTRENFRTE 855
Query: 550 KVRYLVLQVVASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGKLKVDQKMARECYN 609
+ + V +Y+ I+GR L + AV ++ +K P G V L+ D K A C
Sbjct: 856 NISFEVDDFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRG-VLSLRSDIKQAVTCDK 914
Query: 610 NCLNFYGKKSALVGHRCYEIEASDENLDPRGEGRVNRPTPIEETKALKFGDRTLKIGTRL 669
+ + + A+ + EG V TK K G+ K
Sbjct: 915 ESCDMAQTREMASAREDIRLAAATAS-----EGEV------PATKISKSGESEAKTKKIP 963
Query: 670 TEEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHRLALNPSVKPVSQLRRRLGGDKGK 729
+ ++ T N D+FAW DMPGI I H L + KP+ Q RR D+
Sbjct: 964 LDPSDSTKT---ANNKDIFAWKPSDMPGIPREVIEHSLYVKEDAKPIKQRLRRFAQDRKD 1020
Query: 730 AVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKWRMCVDYTDLNKACPKDSYPLPSI 789
A+++E+ KLLAA FI+EV +P WLAN V+V+K G+WRMCVDYTDLN +CPKD + LP I
Sbjct: 1021 AIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNISCPKDPFGLPRI 1080
Query: 790 DSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMPFGLKNAGATY 849
D +VD +G ELLS +D Y GYHQIR+ +D KT+F+T YCY TMPFGLKNAGATY
Sbjct: 1081 DQVVDSTAGCELLSFLDCYLGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATY 1140
Query: 850 QRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMRLNPEKCSFGV 909
QR++ R F+ Q+GRN+E YVDD++VK+ + D DLEE F IR M+LNPEKC+FGV
Sbjct: 1141 QRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGV 1200
Query: 910 QGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRFLPQSGDRSFP 969
GK LGFM++ RGI+ NPEK AI MK PS K+VQ+LTG +AALSRF+ + G+R P
Sbjct: 1201 PSGKLLGFMVSHRGIQANPEKITAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMP 1260
Query: 970 FFKCLRKNVAFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSDSALSSVMLQ 1029
FFK L+K F+W + ++AF K+LL+ PP+L+ P PL LY A + +S+V++
Sbjct: 1261 FFKLLKKTDDFQWGPDAQKAFEDFKKLLTEPPVLASPHPQEPLLLYIAAASQVVSTVLVV 1320
Query: 1030 EIDGE------HRIVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPYFQSFPVKVRTD 1083
E + E R +YFVS L ++ RY +++K +L+T R+L YFQS V V T
Sbjct: 1321 EREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQSHSVTVVTS 1380
Query: 1084 LPLRQVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELT---PDRFERVD 1140
L +L + +GR+ W++EL + + R ++ +Q+LADFV E T D
Sbjct: 1381 FSLGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVAEWTECQEDTPAEKM 1440
Query: 1141 TQWTLFVDGSSNSSGSGAGVTLEGPGELVLEQSLKFEFKATNNQAEYEALIAGLKLAREV 1200
WT+ DGS SG+GAGV L P L L F A++N AEYEAL+ GL++A +
Sbjct: 1441 EHWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISL 1500
Query: 1201 KIRSLLIRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVVEYVPRAENQRAD 1260
I+ L++R DSQLV NQV + D N++ Y + VR L F + + +V R N+ AD
Sbjct: 1501 GIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAAD 1560
Query: 1261 ALAKLASTRKPGNNKSVIQETLAYPSIEGELMACVNRGR-------TWMDPIISILAGDP 1313
LA S R+ + V E L P++ + + W +P+I L
Sbjct: 1561 RLANFGSKREVAPS-DVFVEHLYTPTVPHKDTTQIAGTHDVALVEADWREPLIRFLTSQE 1619
Query: 1314 AEVEQCTKEQ-QREASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVCASHIG 1372
++ E+ R + Y + + LY++ S L +CVS E+ ++ ++H G+C +H
Sbjct: 1620 LPQDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAA 1679
Query: 1373 GRSLACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPFAMWGV 1432
R++ K R GF+WPT D V+ C+ CQ FA P +EL T+ WPFA+WG+
Sbjct: 1680 ARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGL 1739
Query: 1433 DLVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFGIPRAIVS 1492
D+VGPF A + VA+D F+KWIEA+P+ IT+ +F+ IV RFG+P I++
Sbjct: 1740 DMVGPFKKAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIIT 1798
Query: 1493 DNGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRR----RLAEAKG 1548
DNG QF+ ++FC++ GI++ +ASV HP +NGQVE AN +IL+G++ RL G
Sbjct: 1799 DNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAG 1858
Query: 1549 AWLDELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEENQANMA 1608
W+ +LP+VLWS TT T ++PF + YG +AMLP E++ + R R EE + +
Sbjct: 1859 KWVKQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRFRNYREERYEEDRV 1918
Query: 1609 VELDLLSETRDEAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVL-KWRSGAPGNKLTPNW 1667
+L L E R+ A I+ Q + N VR R VGDLVL K ++ +KL+P W
Sbjct: 1919 DDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTRDRHKLSPLW 1978
Query: 1668 EGPYRIVKVLGNGAYHLEELDGRRLPRSFNGLSLRYFYS 1706
EGP+ I V G+Y L+ DG + S+N LR FY+
Sbjct: 1979 EGPFIISDVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 2017
>ref|XP_474845.1| OSJNBa0035O13.3 [Oryza sativa (japonica cultivar-group)]
gi|21741410|emb|CAD40114.1| OSJNBa0035O13.3 [Oryza sativa
(japonica cultivar-group)]
Length = 2008
Score = 902 bits (2331), Expect = 0.0
Identities = 590/1724 (34%), Positives = 865/1724 (49%), Gaps = 171/1724 (9%)
Query: 30 SREADSVAEFRPFSEDVENVAIPDNMKTLVLDSYSGDSDPKDHLLYFNTKMVIIAASDAV 89
+R D + E F++D+ V P K ++ Y G ++P L + + +
Sbjct: 409 NRHDDDLDEVAAFTDDLRRVDWPAGFKPTGIEKYDGTTNPGSWLTVYGLAIRAAGGDNKA 468
Query: 90 KCRMFPSTFKSTAMAWFTTLPRGSISNFRDFSSKFLVQFSANKNQPVTINDLYNIRQQEG 149
P +A +W LPRG+I ++ + F+ F +P T DLYN+ Q+ G
Sbjct: 469 MANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSG 528
Query: 150 ESLKEYMARYSAASVKVEDEEPRACALAFKNGLLPGGLNSKLTRKPARSMGEMRARASTY 209
ESL++Y+ R+S K+ D AF G+ L K RKP R++ M +A+ Y
Sbjct: 529 ESLRDYIRRFSEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFEKANEY 588
Query: 210 ILDEEDDAFKRKRAKLEKGDTSPKRVKKDRSGEDKGDGKQQRPGKGKSVFKPTKEQLYPR 269
AK E T+ K+ G + KG
Sbjct: 589 -------------AKAEDAVTASKQ-----------SGPSWKQNKGTPA----------- 613
Query: 270 RDDYEQRRPWQSKSHRQREETDMVMNTDVSDMLRGASDANLVDEPEAPKYQPRDANPKKW 329
S +H+ R+ + S R S N D+ +
Sbjct: 614 ------TGGGGSNNHKDRKRKPAELVATASHSSRQRSRVNTFDKIMNSQ----------- 656
Query: 330 CEFHRSAGHDTDDCRTLQREIDKLIRAGYQGNRQGQWRNGGDQNKAHKREEERADTKGKK 389
C H ++ H DC ++ D+ + A K +E T KK
Sbjct: 657 CPHHPNSNHVAKDCFVYKQFADQYTKT------------------ARKNSDEEQSTSRKK 698
Query: 390 KQESAAIATKGADDTFAQHSGPPVGTINTIAGGFGGGGDTHAARKRHV--RAVNSVH--- 444
A F H +N I FGG + RK+ + R +N+V
Sbjct: 699 DDGDAPAG-------FQDHRKE----LNHI---FGGPLAYESKRKQKLTEREINAVQPDT 744
Query: 445 -------EVAFGFV---HPDITISMADFEGIKPHKDDPIVVQLRMNSFNVRRVLLDQGSS 494
E+A F HPD + + P+V+ + + +RR L+D GS+
Sbjct: 745 PQYLRWSEIAIKFDRSDHPDRVVHPGRY---------PLVLDPVVRNVKLRRTLIDGGSA 795
Query: 495 ADIIYGDAFDKLGLTDNDL----TPYAGTLVGFAGEQVMVRGYIDLDTIFGEDECARVLK 550
+I++ D + + ++L P+ G + G + + G I L FG E R
Sbjct: 796 LNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL---GQITLPVTFGTRENFRTEN 852
Query: 551 VRYLVLQVVASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGKLKVDQKMARECYNN 610
+ + V +Y+ I+GR L + AV ++ +K P G V L+ D K A C
Sbjct: 853 ISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRG-VLSLRSDIKQAVTC--- 908
Query: 611 CLNFYGKKSALVGHRCYEIEASDENLDPRGEGRVNRPTPIEETKALKFGD---RTLKIG- 666
K+S + H +E+ ++ E++ P+ TK K G+ +T KI
Sbjct: 909 -----DKESCDMAHT-HEMASAREDIRLAAATASEGEIPV--TKTSKSGESEAKTKKIPL 960
Query: 667 --TRLTEEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHRLALNPSVKPVSQLRRRLG 724
+ T+ E+ L L N D+FAW DMPGI I H L + KP+ Q RR
Sbjct: 961 DPSDPTKTAESALITFLQNNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFA 1020
Query: 725 GDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKWRMCVDYTDLNKACPKDSY 784
D+ A+++E+ KLLAA FI+EV +P WLAN V+V+K G+WRMCVDYTDLNK+CPKD +
Sbjct: 1021 QDRKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPF 1080
Query: 785 PLPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMPFGLKN 844
LP ID +VD +G ELLS +D YSGYHQIR+ +D KT+F+T YCY TMPFGLKN
Sbjct: 1081 GLPRIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKN 1140
Query: 845 AGATYQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMRLNPEK 904
AGATYQR++ R F+ Q+GRN+E YVDD++VK+ + D DLEE F IR M+LNPEK
Sbjct: 1141 AGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFVSIRAFRMKLNPEK 1200
Query: 905 CSFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRFLPQSG 964
C+FGV GK LGFM++ RGI+ NPEK AI MK PS K+VQ+LTG +AALSRF+ + G
Sbjct: 1201 CTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLG 1260
Query: 965 DRSFPFFKCLRKNVAFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSDSALS 1024
+R PFFK L+K F+W E ++AF K+LL+ PP+L+ P PL LY + + +S
Sbjct: 1261 ERGMPFFKLLKKTDNFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVS 1320
Query: 1025 SVMLQEIDGE------HRIVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPYFQSFPV 1078
+V+ E + E R +YFVS L ++ RY +++K VT
Sbjct: 1321 TVLAVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGHSVT------------- 1367
Query: 1079 KVRTDLPLRQVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELT---PDR 1135
V T PL +L + +GR+ W++EL + + R ++ +Q+LADFV E T D
Sbjct: 1368 -VVTSFPLGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVAEWTECQEDT 1426
Query: 1136 FERVDTQWTLFVDGSSNSSGSGAGVTLEGPGELVLEQSLKFEFKATNNQAEYEALIAGLK 1195
WT+ DGS SG+GAGV L P L L F A++N AEYEAL+ GL+
Sbjct: 1427 PAENMEHWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLR 1486
Query: 1196 LAREVKIRSLLIRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVVEYVPRAE 1255
+A + I+ L++R DSQLV NQV + D N++ Y + VR L F + + +V R
Sbjct: 1487 IAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHN 1546
Query: 1256 NQRADALAKLASTRKPGNNKSVIQETLAYPSIEGELMACVNRGR-------TWMDPIISI 1308
N+ AD LA S R+ + V E L P++ + V W +P+I
Sbjct: 1547 NEAADRLANFGSKREVAPS-DVFVEHLYTPTVPHKDTTQVAGTHDVAVVETDWREPLIRF 1605
Query: 1309 LAGDPAEVEQCTKEQ-QREASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVC 1367
L ++ E+ R + Y + + LY++ S L +CVS E+ ++ ++H G+C
Sbjct: 1606 LTSQELPQDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGIC 1665
Query: 1368 ASHIGGRSLACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPF 1427
+H R++ K R GF+WPT D V+ C+ CQ FA P +EL T+ WPF
Sbjct: 1666 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPF 1725
Query: 1428 AMWGVDLVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFGIP 1487
A+WG+D+VGPF A + VA+D F+KWIEA+P+ IT+ +F+ IV RFG+P
Sbjct: 1726 AVWGLDMVGPFKKAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVP 1784
Query: 1488 RAIVSDNGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRR----RL 1543
I++DNGTQF+ ++FC++ GI++ +ASV HP +NGQVE AN +IL+G++ RL
Sbjct: 1785 NRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRL 1844
Query: 1544 AEAKGAWLDELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEEN 1603
G W+ +LP+VLWS TT T ++PF + YG +AMLP E++ + R R EE
Sbjct: 1845 KPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRFRNFREERY 1904
Query: 1604 QANMAVELDLLSETRDEAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVL-KWRSGAPGNK 1662
+ + +L L E R+ A IR Q + N VR R VGDLVL K ++ +K
Sbjct: 1905 EEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTRDRHK 1964
Query: 1663 LTPNWEGPYRIVKVLGNGAYHLEELDGRRLPRSFNGLSLRYFYS 1706
L+P WEGP+ I +V G+Y L+ DG + S+N LR FY+
Sbjct: 1965 LSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 2008
>ref|XP_475120.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|46063437|gb|AAS79740.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1756
Score = 899 bits (2322), Expect = 0.0
Identities = 571/1688 (33%), Positives = 849/1688 (49%), Gaps = 154/1688 (9%)
Query: 60 LDSYSGDSDPKDHLLYFNTKMVIIAASDAVKCRMFPSTFKSTAMAWFTTLPRGSISNFRD 119
++ Y G ++P+ L + + P +A +W LPRG+I ++ +
Sbjct: 182 IEKYDGTTNPESWLTVYGLAIRAAGGDSKAMANYLPVALADSARSWLHGLPRGTIRSWAE 241
Query: 120 FSSKFLVQFSANKNQPVTINDLYNIRQQEGESLKEYMARYSAASVKVEDEEPRACALAFK 179
F+ F +P T DLYN+ Q+ GESL++Y+ R+S K+ D AF
Sbjct: 242 LRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKISDITDDVIIAAFT 301
Query: 180 NGLLPGGLNSKLTRKPARSMGEMRARASTYILDEEDDAFKRKRAKLEKGDTSPKRVKKDR 239
G+ L K RKP R++ M +A+ Y AK E T+ K+
Sbjct: 302 KGIRHEELVGKFGRKPPRTVKLMFEKANEY-------------AKAEDAVTASKQ----- 343
Query: 240 SGEDKGDGKQQRPGKGKSVFKPTKEQLYPRRDDYEQRRPWQSKSHRQREETDMVMNTDVS 299
G +P KG S +H+ R+ + +
Sbjct: 344 ------SGPSWKPNKGTPA-----------------TGGGGSNNHKDRKRKPEELVATAT 380
Query: 300 DMLRGASDANLVDEPEAPKYQPRDANPKKWCEFHRSAGHDTDDCRTLQREIDKLIRAGYQ 359
R S N D+ + C H ++ H DC ++ ++ +
Sbjct: 381 HSSRQRSRVNTFDKIMNSQ-----------CPHHPNSNHVAKDCFVYKQFAEQYTKTT-- 427
Query: 360 GNRQGQWRNGGDQNKAHKREEERADTKGKKKQESAAIATKGADDTFAQHSGPPVGTINTI 419
R D+ ++ R+++ DT F H +N I
Sbjct: 428 -------RKNSDEEQSTSRKKDDGDTPAG----------------FQDHRKE----LNHI 460
Query: 420 AGGFGGGGDTHAARKRHV--RAVNSVH----------EVAFGFV---HPDITISMADFEG 464
FGG + RK+ + R +N+V E+A F HPD + +
Sbjct: 461 ---FGGPLAYESKRKQKLTEREINAVQPDTPQYLRWSEIAIKFDRSDHPDRVVHPGRY-- 515
Query: 465 IKPHKDDPIVVQLRMNSFNVRRVLLDQGSSADIIYGDAFDKLGLTDNDL----TPYAGTL 520
P+V+ + + +RR L+D GS+ +I++ D + + ++L P+ G +
Sbjct: 516 -------PLVLDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVI 568
Query: 521 VGFAGEQVMVRGYIDLDTIFGEDECARVLKVRYLVLQVVASYNVIIGRNTLNRLCAVIST 580
G + + G I L FG E R + + V +Y+ I+GR L + AV
Sbjct: 569 PGLSATPL---GQITLPVTFGTRENFRTENISFEVADFETAYHAILGRPALAKFMAVPHY 625
Query: 581 AHLAVKYPLSSGKVGKLKVDQKMARECYNNCLNFYGKKSALVGHRCYEIEASDENLDPRG 640
++ +K P +V L+ D K A C + + + + +
Sbjct: 626 TYMMMKMP-GPRRVLSLRSDIKQAVTCDKESCDMAQTREMASAREDIRLAVATAS----- 679
Query: 641 EGRVNRPTPIEETKALKFGDRTLKIGTRLTEEQETRLTKLLGENLDLFAWSCKDMPGIDP 700
EG V TK K G+ K + ++ T N D+FAW DMPGI
Sbjct: 680 EGEV------PATKISKSGESEAKTKKIPLDPSDSTKT---ANNKDIFAWKPSDMPGIPR 730
Query: 701 NFICHRLALNPSVKPVSQLRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVMVK 760
I H L + KP+ Q RR D+ A+++E+ KLLAA FI+EV +P WLAN V+V+
Sbjct: 731 EVIEHSLHVKEDAKPIKQRLRRFVQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVR 790
Query: 761 KANGKWRMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPAD 820
K G+WRMCVDYTDLNK CPKD + LP ID +VD +G ELLS +D YSGYHQIR+ +D
Sbjct: 791 KKTGQWRMCVDYTDLNKCCPKDPFGLPRIDQVVDSTAGCELLSFLDCYSGYHQIRLKESD 850
Query: 821 EDKTAFMTARVNYCYRTMPFGLKNAGATYQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGL 880
KT+F+T YCY TMPFGLKNAGATYQR++ R F+ Q+GRN+E YVDD+++K+ +
Sbjct: 851 CLKTSFITPIGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVIKTKQKD 910
Query: 881 DHHQDLEEAFGEIRKHSMRLNPEKCSFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSP 940
D DLEE F IR M+LNPEKC+FGV GK LGFM++ RGI+ NPEK AI MK P
Sbjct: 911 DLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPP 970
Query: 941 SNVKEVQRLTGRIAALSRFLPQSGDRSFPFFKCLRKNVAFEWTAECEEAFVRLKELLSSP 1000
S K+VQ+LTG +AALSRF+ + G+R PFFK L+K F+W E ++AF K+ L+ P
Sbjct: 971 STQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPEAQKAFEDFKKFLTEP 1030
Query: 1001 PILSKPIQGHPLHLYFAVSDSALSSVMLQEIDGE------HRIVYFVSHTLQGAEVRYQK 1054
P+L+ P PL LY + + +S+V++ E + E R +YFVS L ++ RY +
Sbjct: 1031 PVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQ 1090
Query: 1055 IEKAALAVLVTARRLRPYFQSFPVKVRTDLPLRQVLQKPDLSGRLVAWSVELSEYGLQYD 1114
++K +L+T R+L YFQ V V T PL +L + +GR+ W++EL + +
Sbjct: 1091 VQKLLYGILITTRKLSHYFQGHSVTVVTSFPLGDILHNREANGRIAKWALELMSLDISFK 1150
Query: 1115 KRGTVGAQSLADFVVELT---PDRFERVDTQWTLFVDGSSNSSGSGAGVTLEGPGELVLE 1171
R ++ +Q+LADFV E T D WT+ DGS SG+GAGV L P L
Sbjct: 1151 PRISIKSQALADFVAEWTECQEDTPAEKMEHWTMHFDGSKRLSGTGAGVVLISPTGERLS 1210
Query: 1172 QSLKFEFKATNNQAEYEALIAGLKLAREVKIRSLLIRTDSQLVENQVKGTFQVKDPNLIK 1231
L F A++N AEYEAL+ GL++A + I+ L++R DSQLV NQV + D N++
Sbjct: 1211 YVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMA 1270
Query: 1232 YLERVRYLMTLFQEVVVEYVPRAENQRADALAKLASTRKPGNNKSVIQETLAYPSIEGEL 1291
Y + VR L F + + +V R N+ AD LA S R+ + V E L P++ +
Sbjct: 1271 YRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSKREVAPS-DVFVEHLYTPTVPHKD 1329
Query: 1292 MACVNRGR-------TWMDPIISILAGDPAEVEQCTKEQ-QREASHYTLIDGHLYRRGFS 1343
+ W +P I L ++ E+ R + Y + + LY++ S
Sbjct: 1330 TTQIAGTHDVALVEADWREPFIRFLTSQELPQDKDEAERISRRSKLYVMHEAELYKKSPS 1389
Query: 1344 TPLLKCVSPEKYEAIMSEVHEGVCASHIGGRSLACKVLRAGFYWPTLRKDCMDFVKQCKE 1403
L +CVS E+ ++ ++H G+C +H R++ K R GF+WPT D V+ C+
Sbjct: 1390 GILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEG 1449
Query: 1404 CQVFADLSKAPPKELVTMSAPWPFAMWGVDLVGPFPTARAQMKFILVAVDYFTKWIEAEP 1463
CQ FA P +EL T+ WPFA+WG+D+VGPF A + VA+D F+KWIEA+P
Sbjct: 1450 CQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFKKAVGGYTHLFVAIDKFSKWIEAKP 1509
Query: 1464 LAKITSAKIVNFYWKRIVCRFGIPRAIVSDNGTQFSSSQTREFCKEMGIQMRFASVEHPQ 1523
+ IT+ +F+ IV RFG+P I++DNG QF+ ++FC++ GI++ +ASV HP
Sbjct: 1510 VVTITADNARDFF-INIVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPM 1568
Query: 1524 TNGQVESANRVILRGLRR----RLAEAKGAWLDELPAVLWSYNTTEQSTTRETPFRMTYG 1579
+NGQVE AN +IL+G++ RL G W+ +LP+VLWS TT T ++PF + YG
Sbjct: 1569 SNGQVERANGMILQGIKARVFDRLKPYAGKWVKQLPSVLWSLRTTPSRATGQSPFFLVYG 1628
Query: 1580 VDAMLPVEIDNFTWRTRPGFEEENQANMAVELDLLSETRDEAHIRETAMKQRVAAKFNSR 1639
+AMLP E++ + R R EE + + +L L E R+ A I+ Q + N
Sbjct: 1629 AEAMLPSEVEFESLRFRNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRN 1688
Query: 1640 VRVRDMQVGDLVL-KWRSGAPGNKLTPNWEGPYRIVKVLGNGAYHLEELDGRRLPRSFNG 1698
VR R VGDLVL K ++ +KL+P WEGP+ I +V G+Y L+ DG + S+N
Sbjct: 1689 VRSRAFLVGDLVLRKIQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNI 1748
Query: 1699 LSLRYFYS 1706
LR FY+
Sbjct: 1749 EHLRRFYA 1756
>emb|CAE02238.2| OSJNBb0054B09.2 [Oryza sativa (japonica cultivar-group)]
gi|50922823|ref|XP_471772.1| OSJNBb0054B09.2 [Oryza
sativa (japonica cultivar-group)]
Length = 1992
Score = 898 bits (2320), Expect = 0.0
Identities = 581/1719 (33%), Positives = 853/1719 (48%), Gaps = 178/1719 (10%)
Query: 31 READSVAEFRPFSEDVENVAIPDNMKTLVLDSYSGDSDPKDHLLYFNTKMVIIAASDAVK 90
R D + F++D+ V P K ++ Y G ++P+ L + + +
Sbjct: 409 RHDDDLDGVAAFTDDLRRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAVGGDSKAM 468
Query: 91 CRMFPSTFKSTAMAWFTTLPRGSISNFRDFSSKFLVQFSANKNQPVTINDLYNIRQQEGE 150
P + +A +W LPRG+I ++ + F+ F +P T DLYN+ Q+ GE
Sbjct: 469 ANYLPVALEDSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGE 528
Query: 151 SLKEYMARYSAASVKVEDEEPRACALAFKNGLLPGGLNSKLTRKPARSMGEMRARASTYI 210
SL++Y+ R+S K+ D AF G+ L K RKP R++ M +A+ Y
Sbjct: 529 SLRDYIRRFSEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFEKANEYA 588
Query: 211 LDEEDDAFKRKRAKLEKGDTSPK-RVKKDRSGEDKGDGKQQRPGKGKSVFKPTKEQLYPR 269
E+ A + + P + KKD G + K K
Sbjct: 589 KAED--------AVIASKQSGPSWKPKKDTPATGGGGSNNHKDRKRKPA----------- 629
Query: 270 RDDYEQRRPWQSKSHRQREET---DMVMNTDVSDMLRGASDANLVDEPEAPKYQPRDANP 326
+ S S RQR D +MN+
Sbjct: 630 -----ELVATASHSSRQRSRVNTFDKIMNSQ----------------------------- 655
Query: 327 KKWCEFHRSAGHDTDDCRTLQREIDKLIRAGYQGNRQGQWRNGGDQNKAHKREEERADTK 386
C H ++ H DC ++ D+ K ++ + +
Sbjct: 656 ---CPHHPNSNHVAKDCFIYKQFADQY-------------------TKTTRKNSDEEQST 693
Query: 387 GKKKQESAAIATKGADDTFAQHSGPPVGTINTIAGGFGGGGDTHAARKRHV--RAVNSVH 444
KKK + A A T H FGG + RK+ + R +N+V
Sbjct: 694 SKKKDDGDAPAGFQDHRTELNHI-------------FGGPLAYESKRKQKLTEREINAVQ 740
Query: 445 ----------EVAFGFV---HPDITISMADFEGIKPHKDDPIVVQLRMNSFNVRRVLLDQ 491
E+A F HPD + + P+V+ + + +RR L+D
Sbjct: 741 PDTPQYLRWSEIAIKFDRLDHPDRVVHPGRY---------PLVLDPVVRNVKLRRTLIDG 791
Query: 492 GSSADIIYGDAFDKLGLTDNDL----TPYAGTLVGFAGEQVMVRGYIDLDTIFGEDECAR 547
GS+ +I++ D + + ++L P+ G + G + + G I L FG E R
Sbjct: 792 GSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL---GQITLPVTFGTRENFR 848
Query: 548 VLKVRYLVLQVVASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGKLKVDQKMAREC 607
+ + V +Y+ I+GR L + AV ++ +K P G V L+ D K A C
Sbjct: 849 TENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRG-VLSLRSDIKQAVTC 907
Query: 608 YNNCLNFYGKKSALVGHRCYEIEASDENLDPRGEGRVNRPTPIEETKALKFGDRTLKIGT 667
+ + + A+ + EG I TK K G+ K T
Sbjct: 908 DKESCDMAQIREMASAREDIRLAAATAS-----EGE------IPATKTSKSGESEAK--T 954
Query: 668 RLTEEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHRLALNPSVKPVSQLRRRLGGDK 727
+ + TK N D+FAW DMPGI I H L + KP+ Q RR D+
Sbjct: 955 KKIHLDSSDPTKT-ANNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDR 1013
Query: 728 GKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKWRMCVDYTDLNKACPKDSYPLP 787
A+++E+ KLLAA FI+EV +P WLAN V+V+K G+WRMCVDYTDLNK+CPKD + LP
Sbjct: 1014 KDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLP 1073
Query: 788 SIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMPFGLKNAGA 847
ID +VD +G ELLS +D YSGYHQIR+ +D KT+F+T YCY TMPFGLKNAGA
Sbjct: 1074 RIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGA 1133
Query: 848 TYQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMRLNPEKCSF 907
TYQR++ R F+ Q+GRN+E YVDD++VK+ + D DLEE F IR M+LNPEKC+F
Sbjct: 1134 TYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTF 1193
Query: 908 GVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRFLPQSGDRS 967
GV GK LGFM++ RGI+ NPEK AI MK PS K+VQ+LTG +AALSRF+ + G+R
Sbjct: 1194 GVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERG 1253
Query: 968 FPFFKCLRKNVAFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSDSALSSVM 1027
PFFK L+K F+W E ++AF K+ L+ PP++S + V+
Sbjct: 1254 MPFFKLLKKTDDFQWGPEAQKAFEDFKKFLTEPPVVSTVL------------------VV 1295
Query: 1028 LQEIDGE----HRIVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPYFQSFPVKVRTD 1083
+E +G R +YFVS L ++ RY +++K +L+T R+L YFQ V V T
Sbjct: 1296 EREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTS 1355
Query: 1084 LPLRQVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELT---PDRFERVD 1140
PL +L + +GR+ W++EL + + R ++ +Q+LADFV E T D
Sbjct: 1356 FPLGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVAEWTECQEDTPAEKM 1415
Query: 1141 TQWTLFVDGSSNSSGSGAGVTLEGPGELVLEQSLKFEFKATNNQAEYEALIAGLKLAREV 1200
WT+ DGS SG+GAGV L P L L F A++N AEYEAL+ GL++A +
Sbjct: 1416 EHWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISL 1475
Query: 1201 KIRSLLIRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVVEYVPRAENQRAD 1260
I+ L++R DSQLV NQV + D N++ Y + VR L F + + +V R N+ AD
Sbjct: 1476 GIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAAD 1535
Query: 1261 ALAKLASTRKPGNNKSVIQETLAYPSIEGELMACVNRGR-------TWMDPIISILAGDP 1313
LA S R+ + V E L P++ + V W +P+I L
Sbjct: 1536 RLANFGSKREMAPS-DVFVEHLYAPTVPHKDTTQVAGTHDVAMVEADWREPLIRFLTSQE 1594
Query: 1314 AEVEQCTKEQ-QREASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVCASHIG 1372
++ E+ R + Y + + LY++ S L +CVS E+ ++ ++H G+C +H
Sbjct: 1595 LPQDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAA 1654
Query: 1373 GRSLACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPFAMWGV 1432
R++ K R GF+WPT D V+ C+ CQ FA P +EL T+ WPFA+WG+
Sbjct: 1655 ARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGL 1714
Query: 1433 DLVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFGIPRAIVS 1492
D+VGPF A + VA+D F+KWIEA+P+ IT+ +F+ IV RFG+P I++
Sbjct: 1715 DMVGPFKKAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIIT 1773
Query: 1493 DNGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRR----RLAEAKG 1548
DNGTQF+ ++FC++ GI++ +ASV HP +NGQVE AN +IL+G++ RL G
Sbjct: 1774 DNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAG 1833
Query: 1549 AWLDELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEENQANMA 1608
W+ +LP+VLWS TT T ++PF + YG +AMLP E++ + R R EE + +
Sbjct: 1834 KWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRFRNFREERYEEDRV 1893
Query: 1609 VELDLLSETRDEAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVL-KWRSGAPGNKLTPNW 1667
+L L E R+ A IR Q + N VR R VGDLVL K ++ +KL+P W
Sbjct: 1894 DDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTRDRHKLSPLW 1953
Query: 1668 EGPYRIVKVLGNGAYHLEELDGRRLPRSFNGLSLRYFYS 1706
EGP+ I +V G+Y L+ DG + S+N LR FY+
Sbjct: 1954 EGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 1992
>gb|AAP52913.1| putative retroelement [Oryza sativa (japonica cultivar-group)]
gi|37532648|ref|NP_920626.1| putative retroelement [Oryza
sativa (japonica cultivar-group)]
gi|19881548|gb|AAM00949.1| Putative retroelement [Oryza
sativa]
Length = 1945
Score = 836 bits (2160), Expect = 0.0
Identities = 520/1421 (36%), Positives = 751/1421 (52%), Gaps = 126/1421 (8%)
Query: 330 CEFHRSAGHDTDDCRTLQREIDKLIRAGYQGNRQGQWRNGGDQNKAHKREEERADTKGKK 389
C H ++ H DC ++ D+ + A K +E T KK
Sbjct: 607 CPHHPNSNHVAKDCFVYKQFADQYTKT------------------ARKNSDEEQSTSRKK 648
Query: 390 KQESAAIATKGADDTFAQHSGPPVGTINTIAGGFGGGGDTHAARKRHV--RAVNSVH--- 444
A F H +N I FGG + RK+ + R +N+V
Sbjct: 649 DDGDAPAG-------FQDHRKE----LNHI---FGGPLAYESKRKQKLTEREINAVQPDT 694
Query: 445 -------EVAFGFV---HPDITISMADFEGIKPHKDDPIVVQLRMNSFNVRRVLLDQGSS 494
E+A F HPD + + P+V+ + + +RR L+D GS+
Sbjct: 695 PQYLRWSEIAIKFDRSDHPDRVVHPGRY---------PLVLDPVVRNVKLRRTLIDGGSA 745
Query: 495 ADIIYGDAFDKLGLTDNDL----TPYAGTLVGFAGEQVMVRGYIDLDTIFGEDECARVLK 550
+I++ D + + ++L P+ G + G + + G I L FG E R
Sbjct: 746 LNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPL---GQITLPVTFGTRENFRTEN 802
Query: 551 VRYLVLQVVASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGKLKVDQKMARECYNN 610
+ + V +Y+ I+GR L + AV ++ +K P G V L+ D K A C
Sbjct: 803 ISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRG-VLSLRSDIKQAVTCDKE 861
Query: 611 CLNFYGKKSALVGHRCYEIEASDENLDPRGEGRVNRPTPIEETKALKFGD---RTLKIGT 667
+ + + A+ + EG I TK K G+ +T KI
Sbjct: 862 SCDMAQTREMASAREDIRLAAATAS-----EGE------IPATKTSKSGESEAKTKKIPL 910
Query: 668 RLTEEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHRLALNPSVKPVSQLRRRLGGDK 727
++ +T N D+FAW DMPGI I H L + KP+ Q RR D+
Sbjct: 911 DPSDPTKT------ANNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDR 964
Query: 728 GKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKWRMCVDYTDLNKACPKDSYPLP 787
A+++E+ KLLAA FI+EV +P WLAN V+V+K G+WRMCVDYTDLNK+CPKD + LP
Sbjct: 965 KDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLP 1024
Query: 788 SIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMPFGLKNAGA 847
ID +VD +G ELLS +D YSGYHQIR+ +D KT+F+T YCY TMPFGLKNAGA
Sbjct: 1025 RIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGA 1084
Query: 848 TYQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMRLNPEKCSF 907
TYQR++ R F+ Q+GRN+E YVDD++VK+ + D DLEE F IR M+LNPEKC+F
Sbjct: 1085 TYQRMIQRFFSTQIGRNVEAYVDDVVVKTKQKGDLISDLEETFVSIRAFRMKLNPEKCTF 1144
Query: 908 GVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRFLPQSGDRS 967
GV GK LGFM++ RGI+ NPEK AI MK PS K+VQ+LTG +AALSRF+ + G+R
Sbjct: 1145 GVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERG 1204
Query: 968 FPFFKCLRKNVAFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSDSALSSVM 1027
PFFK L+K F+W E ++AF K+LL+ PP+L+ P PL LY + + +S+V+
Sbjct: 1205 MPFFKLLKKTDNFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVL 1264
Query: 1028 LQEIDGE------HRIVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPYFQSFPVKVR 1081
+ E + E R +YFVS L ++ RY +++K +L+T R+L YFQ V V
Sbjct: 1265 VVEREEECHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVV 1324
Query: 1082 TDLPLRQVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELT---PDRFER 1138
T PL +L + +GR+ W++EL + + R ++ +Q+LADFV E T D
Sbjct: 1325 TSFPLGDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVAEWTECQEDTPAE 1384
Query: 1139 VDTQWTLFVDGSSNSSGSGAGVTLEGPGELVLEQSLKFEFKATNNQAEYEALIAGLKLAR 1198
WT+ DGS SG+GAGV L P L L F A++N AEYEAL+ GL++A
Sbjct: 1385 NMEHWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAI 1444
Query: 1199 EVKIRSLLIRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVVEYVPRAENQR 1258
+ I+ L++R DSQLV NQ VR L F+ + + +V R N+
Sbjct: 1445 SLGIKRLIVRGDSQLVVNQ------------------VRKLEDKFEGLELSHVLRHNNEA 1486
Query: 1259 ADALAKLASTRKPGNNKSVIQETLAYPSI-------EGELMACVNRGRTWMDPIISILAG 1311
AD LA S R+ + V E L P++ + + W +P I L
Sbjct: 1487 ADRLANFGSKRETAPS-DVFVEHLYTPTVPHKDTTQDADTHDVAMVEADWREPFIRFLTS 1545
Query: 1312 DPAEVEQCTKEQ-QREASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVCASH 1370
++ E+ R + Y + + LY++ S L +CVS E+ ++ ++H G+C +H
Sbjct: 1546 QELPQDKDEAERISRRSKLYVMHESELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNH 1605
Query: 1371 IGGRSLACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPFAMW 1430
R++ K R GF+WPT D V+ C+ CQ FA P +EL T+ WPFA+W
Sbjct: 1606 AAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVW 1665
Query: 1431 GVDLVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFGIPRAI 1490
G+D+VGPF A + VA+D F+KWIEA+P+ IT+ +F+ IV RFG+P I
Sbjct: 1666 GLDMVGPFKKAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRI 1724
Query: 1491 VSDNGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRR----RLAEA 1546
++DNGTQF+ ++FC++ GI++ +ASV HP +NGQVE AN +IL+G++ RL
Sbjct: 1725 ITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPY 1784
Query: 1547 KGAWLDELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEENQAN 1606
G W+ +LP+VLWS TT T ++PF + YG +AMLP E++ + R R EE + +
Sbjct: 1785 AGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRFRNFREERYEED 1844
Query: 1607 MAVELDLLSETRDEAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVL-KWRSGAPGNKLTP 1665
+L L E R+ A IR Q + N VR R VGDLVL K ++ +KL+P
Sbjct: 1845 RVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRKIQTTRDRHKLSP 1904
Query: 1666 NWEGPYRIVKVLGNGAYHLEELDGRRLPRSFNGLSLRYFYS 1706
WEGP+ I +V G+Y L+ DG + S+N LR FY+
Sbjct: 1905 LWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 1945
Score = 85.9 bits (211), Expect = 1e-14
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 3/183 (1%)
Query: 27 DDGSREADSVAEFRPFSEDVENVAIPDNMKTLVLDSYSGDSDPKDHLLYFNTKMVIIAAS 86
D + D VA F ++D+ V P K ++ Y G ++P+ L + +
Sbjct: 409 DSHDDDLDGVAAF---TDDLRRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGD 465
Query: 87 DAVKCRMFPSTFKSTAMAWFTTLPRGSISNFRDFSSKFLVQFSANKNQPVTINDLYNIRQ 146
P +A +W LPRG+I ++ + F+ F +P T DLYN+ Q
Sbjct: 466 SKAMANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQ 525
Query: 147 QEGESLKEYMARYSAASVKVEDEEPRACALAFKNGLLPGGLNSKLTRKPARSMGEMRARA 206
+ GESL++Y+ R+S K+ D AF G+ L K RKP R++ M +A
Sbjct: 526 KSGESLRDYIRRFSEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFEKA 585
Query: 207 STY 209
+ +
Sbjct: 586 NDH 588
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.135 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,906,907,629
Number of Sequences: 2540612
Number of extensions: 126704626
Number of successful extensions: 407929
Number of sequences better than 10.0: 37126
Number of HSP's better than 10.0 without gapping: 4119
Number of HSP's successfully gapped in prelim test: 33026
Number of HSP's that attempted gapping in prelim test: 370281
Number of HSP's gapped (non-prelim): 60874
length of query: 1706
length of database: 863,360,394
effective HSP length: 142
effective length of query: 1564
effective length of database: 502,593,490
effective search space: 786056218360
effective search space used: 786056218360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)
Lotus: description of TM0590c.9