BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0590b.4
(283 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB10748.1| cyclic nucleotide and calmodulin-regulated ion c... 505 e-142
gb|AAU90233.1| putative cyclic nucleotide gated ion channel [Ory... 465 e-130
ref|NP_916396.1| putative cyclic nucleotide and calmodulin-regul... 464 e-129
dbj|BAD53284.1| putative cyclic nucleotide and calmodulin-regula... 464 e-129
gb|AAP38210.1| putative cyclic nucleotide and calmodulin-regulat... 456 e-127
gb|AAY58312.1| cyclic nucleotide-gated ion channel 4 [Hordeum vu... 456 e-127
gb|AAY58304.1| cyclic nucleotide-gated ion channel 4 [Hordeum vu... 456 e-127
gb|AAP38213.1| putative cyclic nucleotide and calmodulin-regulat... 336 5e-91
gb|AAY58313.1| cyclic nucleotide-gated ion channel 2 [Hordeum vu... 336 5e-91
gb|AAK16188.1| putative cyclic nucleotide and calmodulin-regulat... 335 1e-90
gb|AAF86351.1| DND1 [Arabidopsis thaliana] gi|9755796|emb|CAC017... 322 6e-87
ref|NP_974783.1| cyclic nucleotide-regulated ion channel / cycli... 322 6e-87
gb|AAX18166.2| CNGC2 [Gossypium hirsutum] 316 5e-85
sp|Q9SJA4|CNG14_ARATH Putative cyclic nucleotide-gated ion chann... 223 5e-57
gb|AAD23886.1| putative cyclic nucleotide-regulated ion channel ... 223 5e-57
emb|CAB81029.1| cyclic nucleotide and calmodulin-regulated ion c... 221 2e-56
gb|AAM74509.1| AT4g30360/F17I23_300 [Arabidopsis thaliana] gi|30... 221 2e-56
gb|AAD29827.1| putative cyclic nucleotide and calmodulin-regula... 220 3e-56
ref|NP_173051.1| cyclic nucleotide-regulated ion channel, putati... 215 1e-54
gb|AAF18496.1| Strong similarity to gb|Y17914 ion channel protei... 215 1e-54
>dbj|BAB10748.1| cyclic nucleotide and calmodulin-regulated ion channel [Arabidopsis
thaliana] gi|4581203|emb|CAB40129.1| cyclic nucleotide
and calmodulin-regulated ion channel [Arabidopsis
thaliana] gi|30696428|ref|NP_851188.1| cyclic
nucleotide-regulated ion channel / cyclic
nucleotide-gated channel (CNGC4) [Arabidopsis thaliana]
gi|15239581|ref|NP_200236.1| cyclic nucleotide-regulated
ion channel / cyclic nucleotide-gated channel (CNGC4)
[Arabidopsis thaliana] gi|16323174|gb|AAL15321.1|
AT5g54250/MDK4_7 [Arabidopsis thaliana]
gi|38503128|sp|Q94AS9|CNGC4_ARATH Cyclic
nucleotide-gated ion channel 4 (AtCNGC4) (Cyclic
nucleotide-and calmodulin-regulated ion channel 4)
(AtHLM1)
Length = 694
Score = 505 bits (1300), Expect = e-142
Identities = 239/281 (85%), Positives = 263/281 (93%), Gaps = 1/281 (0%)
Query: 1 VFLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNL 60
VFL ATTSKKQAM L+MRN+EWWM+KR LP G RQRVRNYERQRW AMRGVDEC+M++NL
Sbjct: 415 VFLHATTSKKQAMHLKMRNIEWWMKKRHLPIGFRQRVRNYERQRWAAMRGVDECEMVQNL 474
Query: 61 PQGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRML 120
P+GLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSL+FTKGETI +EGD V+RML
Sbjct: 475 PEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRML 534
Query: 121 FVVRGHLQSSQDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETTE 180
FVVRGHLQSSQ LRDGVKS C LGPGNFSGDELLSWCLRRPF+ERLPPSS+TLVTLETTE
Sbjct: 535 FVVRGHLQSSQLLRDGVKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTE 594
Query: 181 AFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLSLTSL 240
AFGL+AEDV+YVTQHFRYTF+ EKVKRSARYYSPGWRTWAAVA+QLAWRRYKHRL+LTSL
Sbjct: 595 AFGLDAEDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSL 654
Query: 241 SFIRPRRPASRCTSMEEDRLRLYTALLTSPKPNDQEEYDDF 281
SFIRPRRP SRC S+ ED+LRLY A+LTSPKPN +++DD+
Sbjct: 655 SFIRPRRPLSRCASLGEDKLRLYAAILTSPKPN-PDDFDDY 694
>gb|AAU90233.1| putative cyclic nucleotide gated ion channel [Oryza sativa
(japonica cultivar-group)]
Length = 691
Score = 465 bits (1197), Expect = e-130
Identities = 216/278 (77%), Positives = 248/278 (88%)
Query: 1 VFLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNL 60
VFL+ATTSKKQAMQ R+R LEWWM + +P G RQRVR +ERQRW A RGVDECQ++R+L
Sbjct: 414 VFLNATTSKKQAMQTRLRGLEWWMEHKGVPHGFRQRVRQFERQRWAATRGVDECQIVRDL 473
Query: 61 PQGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRML 120
P+GLRRDIKYHLCLDLVRQVPLF HMDDLVLENICDRVKSL+F KGE I REGDPV+RML
Sbjct: 474 PEGLRRDIKYHLCLDLVRQVPLFHHMDDLVLENICDRVKSLIFPKGEIIVREGDPVQRML 533
Query: 121 FVVRGHLQSSQDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETTE 180
F+VRGHLQ SQ +R+G S+CTLGPGNFSGDELLSWC+RRPF+ERLP SS+TLVT E+TE
Sbjct: 534 FIVRGHLQCSQVMRNGATSWCTLGPGNFSGDELLSWCMRRPFMERLPASSSTLVTAESTE 593
Query: 181 AFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLSLTSL 240
AFGLEA DV+YVTQHFRYTF +KV+RSARYYS GWRTWAAVA+QLAWRRYKHR +L SL
Sbjct: 594 AFGLEAGDVKYVTQHFRYTFTSDKVRRSARYYSHGWRTWAAVAVQLAWRRYKHRKTLASL 653
Query: 241 SFIRPRRPASRCTSMEEDRLRLYTALLTSPKPNDQEEY 278
SFIRPRRP SRC+S+ E++LRLYTA+LTSPKPN +++
Sbjct: 654 SFIRPRRPLSRCSSLGEEKLRLYTAILTSPKPNQDDDF 691
>ref|NP_916396.1| putative cyclic nucleotide and calmodulin-regulated ion channel
[Oryza sativa (japonica cultivar-group)]
Length = 673
Score = 464 bits (1194), Expect = e-129
Identities = 216/277 (77%), Positives = 249/277 (88%)
Query: 1 VFLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNL 60
VFL+A TSKKQAMQ R+R +EWWM++++LPQ R RVR +ERQRW A RGVDEC+++R+L
Sbjct: 394 VFLNAATSKKQAMQTRLRGVEWWMKRKKLPQSFRHRVRQHERQRWAATRGVDECRIVRDL 453
Query: 61 PQGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRML 120
P+GLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVF KGE I REGDPV+RML
Sbjct: 454 PEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFPKGEIIVREGDPVQRML 513
Query: 121 FVVRGHLQSSQDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETTE 180
F+VRGHLQSSQ LR G S CTLGPGNFSGDELLSWC+RRPF+ERLP SS+TLVT+E+TE
Sbjct: 514 FIVRGHLQSSQVLRTGATSCCTLGPGNFSGDELLSWCMRRPFLERLPASSSTLVTMESTE 573
Query: 181 AFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLSLTSL 240
AFGLEA DV+YVTQHFRYTF ++V+RSARYYS GWRTWAAVA+QLAWRRYKHR +L SL
Sbjct: 574 AFGLEAADVKYVTQHFRYTFTNDRVRRSARYYSHGWRTWAAVAVQLAWRRYKHRKTLASL 633
Query: 241 SFIRPRRPASRCTSMEEDRLRLYTALLTSPKPNDQEE 277
SFIRPRRP SRC+S+ E++LRLYTA+LTSPKPN ++
Sbjct: 634 SFIRPRRPLSRCSSLGEEKLRLYTAILTSPKPNPNQD 670
>dbj|BAD53284.1| putative cyclic nucleotide and calmodulin-regulated ion channel
[Oryza sativa (japonica cultivar-group)]
Length = 666
Score = 464 bits (1194), Expect = e-129
Identities = 216/277 (77%), Positives = 249/277 (88%)
Query: 1 VFLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNL 60
VFL+A TSKKQAMQ R+R +EWWM++++LPQ R RVR +ERQRW A RGVDEC+++R+L
Sbjct: 387 VFLNAATSKKQAMQTRLRGVEWWMKRKKLPQSFRHRVRQHERQRWAATRGVDECRIVRDL 446
Query: 61 PQGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRML 120
P+GLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVF KGE I REGDPV+RML
Sbjct: 447 PEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFPKGEIIVREGDPVQRML 506
Query: 121 FVVRGHLQSSQDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETTE 180
F+VRGHLQSSQ LR G S CTLGPGNFSGDELLSWC+RRPF+ERLP SS+TLVT+E+TE
Sbjct: 507 FIVRGHLQSSQVLRTGATSCCTLGPGNFSGDELLSWCMRRPFLERLPASSSTLVTMESTE 566
Query: 181 AFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLSLTSL 240
AFGLEA DV+YVTQHFRYTF ++V+RSARYYS GWRTWAAVA+QLAWRRYKHR +L SL
Sbjct: 567 AFGLEAADVKYVTQHFRYTFTNDRVRRSARYYSHGWRTWAAVAVQLAWRRYKHRKTLASL 626
Query: 241 SFIRPRRPASRCTSMEEDRLRLYTALLTSPKPNDQEE 277
SFIRPRRP SRC+S+ E++LRLYTA+LTSPKPN ++
Sbjct: 627 SFIRPRRPLSRCSSLGEEKLRLYTAILTSPKPNPNQD 663
>gb|AAP38210.1| putative cyclic nucleotide and calmodulin-regulated ion channel
protein [Hordeum vulgare subsp. vulgare]
Length = 587
Score = 456 bits (1173), Expect = e-127
Identities = 210/278 (75%), Positives = 246/278 (87%)
Query: 1 VFLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNL 60
VFL+ATTSKKQAM R+R+LEWWM+++ LPQ R RVR +ERQRW A RGVDECQ++R+L
Sbjct: 310 VFLNATTSKKQAMHTRLRSLEWWMKRKDLPQSYRHRVRQFERQRWAATRGVDECQIVRDL 369
Query: 61 PQGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRML 120
P+ LRRDIKYHLCLDLVRQVPLF HMDDLVLEN+CDRV+SL++ KGETI REGDPV+RM+
Sbjct: 370 PEALRRDIKYHLCLDLVRQVPLFHHMDDLVLENMCDRVRSLIYPKGETIVREGDPVQRMV 429
Query: 121 FVVRGHLQSSQDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETTE 180
F+VRGHLQ SQ+LR+G S C LGPGNF+GDELL WCLRRPF ERLP SS+TLVTLE+TE
Sbjct: 430 FIVRGHLQCSQELRNGGTSCCMLGPGNFTGDELLPWCLRRPFAERLPASSSTLVTLESTE 489
Query: 181 AFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLSLTSL 240
FGLEA DV+YVTQHFRYTF E+V+RSARYYSPGWRTWAAVA+QLAWRRYKHR +L+SL
Sbjct: 490 VFGLEAADVKYVTQHFRYTFTNERVRRSARYYSPGWRTWAAVAVQLAWRRYKHRKTLSSL 549
Query: 241 SFIRPRRPASRCTSMEEDRLRLYTALLTSPKPNDQEEY 278
SFIRPRRP SRC+S+ E++LRLYTA+L SPKPN + +
Sbjct: 550 SFIRPRRPLSRCSSLGEEKLRLYTAILASPKPNQDDGF 587
>gb|AAY58312.1| cyclic nucleotide-gated ion channel 4 [Hordeum vulgare subsp.
vulgare] gi|66933076|gb|AAY58311.1| cyclic
nucleotide-gated ion channel 4 [Hordeum vulgare subsp.
vulgare] gi|66933074|gb|AAY58310.1| cyclic
nucleotide-gated ion channel 4 [Hordeum vulgare subsp.
vulgare] gi|66933072|gb|AAY58309.1| cyclic
nucleotide-gated ion channel 4 [Hordeum vulgare subsp.
vulgare]
Length = 495
Score = 456 bits (1173), Expect = e-127
Identities = 210/278 (75%), Positives = 246/278 (87%)
Query: 1 VFLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNL 60
VFL+ATTSKKQAM R+R+LEWWM+++ LPQ R RVR +ERQRW A RGVDECQ++R+L
Sbjct: 218 VFLNATTSKKQAMHTRLRSLEWWMKRKDLPQSYRHRVRQFERQRWAATRGVDECQIVRDL 277
Query: 61 PQGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRML 120
P+ LRRDIKYHLCLDLVRQVPLF HMDDLVLEN+CDRV+SL++ KGETI REGDPV+RM+
Sbjct: 278 PEALRRDIKYHLCLDLVRQVPLFHHMDDLVLENMCDRVRSLIYPKGETIVREGDPVQRMV 337
Query: 121 FVVRGHLQSSQDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETTE 180
F+VRGHLQ SQ+LR+G S C LGPGNF+GDELL WCLRRPF ERLP SS+TLVTLE+TE
Sbjct: 338 FIVRGHLQCSQELRNGGTSCCMLGPGNFTGDELLPWCLRRPFAERLPASSSTLVTLESTE 397
Query: 181 AFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLSLTSL 240
FGLEA DV+YVTQHFRYTF E+V+RSARYYSPGWRTWAAVA+QLAWRRYKHR +L+SL
Sbjct: 398 VFGLEAADVKYVTQHFRYTFTNERVRRSARYYSPGWRTWAAVAVQLAWRRYKHRKTLSSL 457
Query: 241 SFIRPRRPASRCTSMEEDRLRLYTALLTSPKPNDQEEY 278
SFIRPRRP SRC+S+ E++LRLYTA+L SPKPN + +
Sbjct: 458 SFIRPRRPLSRCSSLGEEKLRLYTAILASPKPNQDDGF 495
>gb|AAY58304.1| cyclic nucleotide-gated ion channel 4 [Hordeum vulgare subsp.
vulgare]
Length = 686
Score = 456 bits (1173), Expect = e-127
Identities = 210/278 (75%), Positives = 246/278 (87%)
Query: 1 VFLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNL 60
VFL+ATTSKKQAM R+R+LEWWM+++ LPQ R RVR +ERQRW A RGVDECQ++R+L
Sbjct: 409 VFLNATTSKKQAMHTRLRSLEWWMKRKDLPQSYRHRVRQFERQRWAATRGVDECQIVRDL 468
Query: 61 PQGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRML 120
P+ LRRDIKYHLCLDLVRQVPLF HMDDLVLEN+CDRV+SL++ KGETI REGDPV+RM+
Sbjct: 469 PEALRRDIKYHLCLDLVRQVPLFHHMDDLVLENMCDRVRSLIYPKGETIVREGDPVQRMV 528
Query: 121 FVVRGHLQSSQDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETTE 180
F+VRGHLQ SQ+LR+G S C LGPGNF+GDELL WCLRRPF ERLP SS+TLVTLE+TE
Sbjct: 529 FIVRGHLQCSQELRNGGTSCCMLGPGNFTGDELLPWCLRRPFAERLPASSSTLVTLESTE 588
Query: 181 AFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLSLTSL 240
FGLEA DV+YVTQHFRYTF E+V+RSARYYSPGWRTWAAVA+QLAWRRYKHR +L+SL
Sbjct: 589 VFGLEAADVKYVTQHFRYTFTNERVRRSARYYSPGWRTWAAVAVQLAWRRYKHRKTLSSL 648
Query: 241 SFIRPRRPASRCTSMEEDRLRLYTALLTSPKPNDQEEY 278
SFIRPRRP SRC+S+ E++LRLYTA+L SPKPN + +
Sbjct: 649 SFIRPRRPLSRCSSLGEEKLRLYTAILASPKPNQDDGF 686
>gb|AAP38213.1| putative cyclic nucleotide and calmodulin-regulated ion channel
protein [Hordeum vulgare subsp. vulgare]
Length = 415
Score = 336 bits (861), Expect = 5e-91
Identities = 161/278 (57%), Positives = 211/278 (74%), Gaps = 4/278 (1%)
Query: 1 VFLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNL 60
VFL A ++K+ MQLR R++EWWMR+RQLP LRQRVR YER+RW A+ G +E +MI++L
Sbjct: 141 VFLHAVLARKRKMQLRFRDMEWWMRRRQLPSRLRQRVRKYERERWAAITGDEEMEMIKDL 200
Query: 61 PQGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRML 120
P+GLRRDIK +LCL+LV+QVPLF MD+L+L+NICDR++ LVF GE + REGDPV+RM+
Sbjct: 201 PEGLRRDIKRYLCLELVKQVPLFHGMDELILDNICDRLRPLVFCGGEKVIREGDPVQRMV 260
Query: 121 FVVRGHLQSSQDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETTE 180
FV++G L+S+Q L GV + C LG G+F GDELLSWCLRRPF++RLP SSAT +E +
Sbjct: 261 FVLQGKLRSTQPLTKGVVAECVLGAGSFLGDELLSWCLRRPFVDRLPASSATFECVEAAQ 320
Query: 181 AFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLSLTSL 240
AF L+A D+RY+T+HFRY F +K+KR+ARYYS WRTWAAV +QLAWRRY+ R+ T+
Sbjct: 321 AFCLDAPDLRYITEHFRYKFANDKLKRTARYYSSNWRTWAAVNVQLAWRRYRARMMATA- 379
Query: 241 SFIRPRRPASRCTSMEED-RLRLYTALLTSPKPNDQEE 277
+ P PA + D RLR Y A+ S +P+D E
Sbjct: 380 --VLPPPPAGAAGPEDGDRRLRHYAAMFMSLRPHDHLE 415
>gb|AAY58313.1| cyclic nucleotide-gated ion channel 2 [Hordeum vulgare subsp.
vulgare]
Length = 605
Score = 336 bits (861), Expect = 5e-91
Identities = 161/278 (57%), Positives = 211/278 (74%), Gaps = 4/278 (1%)
Query: 1 VFLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNL 60
VFL A ++K+ MQLR R++EWWMR+RQLP LRQRVR YER+RW A+ G +E +MI++L
Sbjct: 331 VFLHAVLARKRKMQLRFRDMEWWMRRRQLPSRLRQRVRKYERERWAAITGDEEMEMIKDL 390
Query: 61 PQGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRML 120
P+GLRRDIK +LCL+LV+QVPLF MD+L+L+NICDR++ LVF GE + REGDPV+RM+
Sbjct: 391 PEGLRRDIKRYLCLELVKQVPLFHGMDELILDNICDRLRPLVFCGGEKVIREGDPVQRMV 450
Query: 121 FVVRGHLQSSQDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETTE 180
FV++G L+S+Q L GV + C LG G+F GDELLSWCLRRPF++RLP SSAT +E +
Sbjct: 451 FVLQGKLRSTQPLTKGVVAECVLGAGSFLGDELLSWCLRRPFVDRLPASSATFECVEAAQ 510
Query: 181 AFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLSLTSL 240
AF L+A D+RY+T+HFRY F +K+KR+ARYYS WRTWAAV +QLAWRRY+ R+ T+
Sbjct: 511 AFCLDAPDLRYITEHFRYKFANDKLKRTARYYSSNWRTWAAVNVQLAWRRYRARMMATA- 569
Query: 241 SFIRPRRPASRCTSMEED-RLRLYTALLTSPKPNDQEE 277
+ P PA + D RLR Y A+ S +P+D E
Sbjct: 570 --VLPPPPAGAAGPEDGDRRLRHYAAMFMSLRPHDHLE 605
>gb|AAK16188.1| putative cyclic nucleotide and calmodulin-regulated ion channel
protein [Oryza sativa (japonica cultivar-group)]
gi|50918881|ref|XP_469837.1| putative cyclic nucleotide
and calmodulin-regulated ion channel protein [Oryza
sativa (japonica cultivar-group)]
Length = 782
Score = 335 bits (858), Expect = 1e-90
Identities = 162/277 (58%), Positives = 210/277 (75%), Gaps = 2/277 (0%)
Query: 1 VFLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNL 60
VFL A ++K+ MQLR R++EWWMR+RQLP LRQRVR YER+RW A+ G +E +MI++L
Sbjct: 508 VFLHAVLARKRKMQLRFRDMEWWMRRRQLPSRLRQRVRKYERERWAAITGDEEMEMIKDL 567
Query: 61 PQGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRML 120
P+GLRRDIK +LCL+LV+QVPLF MDDL+L+NICDR++ LVF+ GE + REGDPV+RM+
Sbjct: 568 PEGLRRDIKRYLCLELVKQVPLFHGMDDLILDNICDRLRPLVFSSGEKVIREGDPVQRMV 627
Query: 121 FVVRGHLQSSQDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETTE 180
FV++G L+S+Q L GV + C LG GNF GDELLSWCLRRP ++RLP SSAT +ET +
Sbjct: 628 FVLQGKLRSTQPLAKGVVATCMLGAGNFLGDELLSWCLRRPSLDRLPASSATFECVETAQ 687
Query: 181 AFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLSLTSL 240
AF L+A D+R++T+ FRY F EK+KR+ARYYS WRTWAAV IQLAWRRYK R +
Sbjct: 688 AFCLDAPDLRFITEQFRYKFANEKLKRTARYYSSNWRTWAAVNIQLAWRRYKARTTTDLA 747
Query: 241 SFIRPRRPASRCTSMEEDRLRLYTALLTSPKPNDQEE 277
S +P P++ + RLR Y A+ S +P+D E
Sbjct: 748 SAAQP--PSAGGPDDGDRRLRHYAAMFMSLRPHDHLE 782
>gb|AAF86351.1| DND1 [Arabidopsis thaliana] gi|9755796|emb|CAC01740.1| cyclic
nucleotide-gated cation channel [Arabidopsis thaliana]
gi|3096949|emb|CAA76179.1| putative cyclic
nucleotide-regulated ion channel [Arabidopsis thaliana]
gi|15242291|ref|NP_197045.1| cyclic nucleotide-regulated
ion channel / cyclic nucleotide-gated channel (CNGC2)
[Arabidopsis thaliana] gi|38502856|sp|O65718|CNGC2_ARATH
Cyclic nucleotide-gated ion channel 2 (AtCNGC2) (Cyclic
nucleotide-and calmodulin-regulated ion channel 2)
(DEFENSE NO DEATH 1) gi|3894399|gb|AAC78613.1| cyclic
nucleotide-gated cation channel [Arabidopsis thaliana]
Length = 726
Score = 322 bits (826), Expect = 6e-87
Identities = 155/277 (55%), Positives = 198/277 (70%)
Query: 1 VFLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNL 60
VFL A +KK+ MQ+R R++EWWM++RQLP LRQRVR +ERQRW A+ G DE ++I +L
Sbjct: 450 VFLHAVMAKKRKMQIRCRDMEWWMKRRQLPSRLRQRVRRFERQRWNALGGEDELELIHDL 509
Query: 61 PQGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRML 120
P GLRRDIK +LC DL+ +VPLF+ MDDL+L+NICDR K VF+K E I REGDPV+RM+
Sbjct: 510 PPGLRRDIKRYLCFDLINKVPLFRGMDDLILDNICDRAKPRVFSKDEKIIREGDPVQRMI 569
Query: 121 FVVRGHLQSSQDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETTE 180
F++RG ++ Q L GV + TL PG + GDELLSWCLRRPF++RLPPSSAT V LE E
Sbjct: 570 FIMRGRVKRIQSLSKGVLATSTLEPGGYLGDELLSWCLRRPFLDRLPPSSATFVCLENIE 629
Query: 181 AFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLSLTSL 240
AF L +ED+RY+T HFRY F E++KR+ARYYS WRTWAAV IQ+AWRR + R ++
Sbjct: 630 AFSLGSEDLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQMAWRRRRKRTRGENI 689
Query: 241 SFIRPRRPASRCTSMEEDRLRLYTALLTSPKPNDQEE 277
+ E RL Y A+ S +P+D E
Sbjct: 690 GGSMSPVSENSIEGNSERRLLQYAAMFMSIRPHDHLE 726
>ref|NP_974783.1| cyclic nucleotide-regulated ion channel / cyclic nucleotide-gated
channel (CNGC2) [Arabidopsis thaliana]
Length = 593
Score = 322 bits (826), Expect = 6e-87
Identities = 155/277 (55%), Positives = 198/277 (70%)
Query: 1 VFLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNL 60
VFL A +KK+ MQ+R R++EWWM++RQLP LRQRVR +ERQRW A+ G DE ++I +L
Sbjct: 317 VFLHAVMAKKRKMQIRCRDMEWWMKRRQLPSRLRQRVRRFERQRWNALGGEDELELIHDL 376
Query: 61 PQGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRML 120
P GLRRDIK +LC DL+ +VPLF+ MDDL+L+NICDR K VF+K E I REGDPV+RM+
Sbjct: 377 PPGLRRDIKRYLCFDLINKVPLFRGMDDLILDNICDRAKPRVFSKDEKIIREGDPVQRMI 436
Query: 121 FVVRGHLQSSQDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETTE 180
F++RG ++ Q L GV + TL PG + GDELLSWCLRRPF++RLPPSSAT V LE E
Sbjct: 437 FIMRGRVKRIQSLSKGVLATSTLEPGGYLGDELLSWCLRRPFLDRLPPSSATFVCLENIE 496
Query: 181 AFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLSLTSL 240
AF L +ED+RY+T HFRY F E++KR+ARYYS WRTWAAV IQ+AWRR + R ++
Sbjct: 497 AFSLGSEDLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQMAWRRRRKRTRGENI 556
Query: 241 SFIRPRRPASRCTSMEEDRLRLYTALLTSPKPNDQEE 277
+ E RL Y A+ S +P+D E
Sbjct: 557 GGSMSPVSENSIEGNSERRLLQYAAMFMSIRPHDHLE 593
>gb|AAX18166.2| CNGC2 [Gossypium hirsutum]
Length = 715
Score = 316 bits (809), Expect = 5e-85
Identities = 154/277 (55%), Positives = 198/277 (70%), Gaps = 7/277 (2%)
Query: 1 VFLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNL 60
VFL A +KK+ MQLR R++EWWM++RQLP LRQRVR+YERQ+W + G DE ++I++L
Sbjct: 446 VFLHAVMAKKRKMQLRCRDMEWWMKRRQLPSCLRQRVRHYERQKWATLGGEDEMELIKDL 505
Query: 61 PQGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRML 120
P+GLRRDIK LCLDL+++VPLF +++DL+L+NICDRVK LVF+K E I REGDPV+RM+
Sbjct: 506 PEGLRRDIKRFLCLDLIKKVPLFHNLNDLILDNICDRVKPLVFSKDEKIIREGDPVQRMV 565
Query: 121 FVVRGHLQSSQDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETTE 180
FVVRG ++ Q L GV + + G F GDELLSWCLRRPFI RLP SSAT V +E E
Sbjct: 566 FVVRGRIKRIQSLSKGVVATSLIESGGFLGDELLSWCLRRPFINRLPASSATFVCVEPIE 625
Query: 181 AFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLSLTSL 240
AF L++ ++Y+T HFRY F E++KR+ARYYS WRTWAAV IQL WRRY+ R
Sbjct: 626 AFSLDSNHLKYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQLGWRRYRTRTR---- 681
Query: 241 SFIRPRRPASRCTSMEEDRLRLYTALLTSPKPNDQEE 277
P A+ + + RL Y A+ S +P D E
Sbjct: 682 ---GPMISAAENGNSSDRRLLQYAAMFMSIRPQDHLE 715
>sp|Q9SJA4|CNG14_ARATH Putative cyclic nucleotide-gated ion channel 14 (Cyclic
nucleotide-and calmodulin-regulated ion channel 14)
gi|30682497|ref|NP_850056.1| cyclic nucleotide-regulated
ion channel, putative (CNGC14) [Arabidopsis thaliana]
Length = 726
Score = 223 bits (568), Expect = 5e-57
Identities = 117/242 (48%), Positives = 158/242 (64%), Gaps = 3/242 (1%)
Query: 2 FLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNLP 61
+L + T + + +L+ R+ E WM R LPQ LR+RVR + + +W A RGVDE ++ +LP
Sbjct: 401 YLQSITVRLEEWRLKRRDTEEWMGHRLLPQNLRERVRRFVQYKWLATRGVDEETILHSLP 460
Query: 62 QGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRMLF 121
LRRDI+ HLCLDLVR+VPLF MDD +L+ IC+R+ S + T+G I REGDPV MLF
Sbjct: 461 ADLRRDIQRHLCLDLVRRVPLFAQMDDQLLDAICERLASSLSTQGNYIVREGDPVTEMLF 520
Query: 122 VVRGHLQSS--QDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETT 179
++RG L+SS R G + TL PG+F G+ELL+W L LP S+ T+ LE
Sbjct: 521 IIRGKLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPKSTVNLPSSTRTVRALEEV 580
Query: 180 EAFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLSLTS 239
EAF L+A D+++V FR K K++ + RYYS WRTWAA +Q+AWRRYK + S
Sbjct: 581 EAFALQAGDLKFVANQFRRLHSK-KLQHTFRYYSHQWRTWAACFVQVAWRRYKRKKLAKS 639
Query: 240 LS 241
LS
Sbjct: 640 LS 641
>gb|AAD23886.1| putative cyclic nucleotide-regulated ion channel protein
[Arabidopsis thaliana]
Length = 690
Score = 223 bits (568), Expect = 5e-57
Identities = 117/242 (48%), Positives = 158/242 (64%), Gaps = 3/242 (1%)
Query: 2 FLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNLP 61
+L + T + + +L+ R+ E WM R LPQ LR+RVR + + +W A RGVDE ++ +LP
Sbjct: 365 YLQSITVRLEEWRLKRRDTEEWMGHRLLPQNLRERVRRFVQYKWLATRGVDEETILHSLP 424
Query: 62 QGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRMLF 121
LRRDI+ HLCLDLVR+VPLF MDD +L+ IC+R+ S + T+G I REGDPV MLF
Sbjct: 425 ADLRRDIQRHLCLDLVRRVPLFAQMDDQLLDAICERLASSLSTQGNYIVREGDPVTEMLF 484
Query: 122 VVRGHLQSS--QDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETT 179
++RG L+SS R G + TL PG+F G+ELL+W L LP S+ T+ LE
Sbjct: 485 IIRGKLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPKSTVNLPSSTRTVRALEEV 544
Query: 180 EAFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLSLTS 239
EAF L+A D+++V FR K K++ + RYYS WRTWAA +Q+AWRRYK + S
Sbjct: 545 EAFALQAGDLKFVANQFRRLHSK-KLQHTFRYYSHQWRTWAACFVQVAWRRYKRKKLAKS 603
Query: 240 LS 241
LS
Sbjct: 604 LS 605
>emb|CAB81029.1| cyclic nucleotide and calmodulin-regulated ion channel-like protein
[Arabidopsis thaliana]
Length = 726
Score = 221 bits (562), Expect = 2e-56
Identities = 116/244 (47%), Positives = 158/244 (64%), Gaps = 3/244 (1%)
Query: 2 FLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNLP 61
+L + T + + +L+ R+ E WMR RQLP+ LR RVR YE+ +W A RGVDE ++++LP
Sbjct: 407 YLQSLTVRLEEWRLKKRDTEEWMRHRQLPEELRNRVRRYEQYKWLATRGVDEEVLLQSLP 466
Query: 62 QGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRMLF 121
LRRDI+ HLCLDLVR+VP F MDD +L+ IC+R+ S + T+G + REGD + MLF
Sbjct: 467 TDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLCTEGTYLVREGDLISEMLF 526
Query: 122 VVRGHLQSS--QDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETT 179
++RG L+SS R G + L PG+F G+ELLSW L LP S+ T+ L
Sbjct: 527 IIRGRLESSTTNGGRTGFFNSIILRPGDFCGEELLSWALLPKSTLNLPSSTRTVRALVEV 586
Query: 180 EAFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLSLTS 239
EAF L AED+++V FR K K++ + R+YS WRTWAA IQ AWRRYK R+ +
Sbjct: 587 EAFALRAEDLKFVANQFRRLHSK-KLQHTFRFYSHHWRTWAACFIQAAWRRYKRRVMENN 645
Query: 240 LSFI 243
L+ I
Sbjct: 646 LTAI 649
>gb|AAM74509.1| AT4g30360/F17I23_300 [Arabidopsis thaliana]
gi|30688654|ref|NP_194765.2| cyclic nucleotide-regulated
ion channel, putative (CNGC17) [Arabidopsis thaliana]
gi|25090415|gb|AAN72295.1| At4g30360/F17I23_300
[Arabidopsis thaliana] gi|38503044|sp|Q8L7Z0|CNG17_ARATH
Probable cyclic nucleotide-gated ion channel 17 (Cyclic
nucleotide-and calmodulin-regulated ion channel 17)
Length = 720
Score = 221 bits (562), Expect = 2e-56
Identities = 116/244 (47%), Positives = 158/244 (64%), Gaps = 3/244 (1%)
Query: 2 FLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNLP 61
+L + T + + +L+ R+ E WMR RQLP+ LR RVR YE+ +W A RGVDE ++++LP
Sbjct: 401 YLQSLTVRLEEWRLKKRDTEEWMRHRQLPEELRNRVRRYEQYKWLATRGVDEEVLLQSLP 460
Query: 62 QGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRMLF 121
LRRDI+ HLCLDLVR+VP F MDD +L+ IC+R+ S + T+G + REGD + MLF
Sbjct: 461 TDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLCTEGTYLVREGDLISEMLF 520
Query: 122 VVRGHLQSS--QDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETT 179
++RG L+SS R G + L PG+F G+ELLSW L LP S+ T+ L
Sbjct: 521 IIRGRLESSTTNGGRTGFFNSIILRPGDFCGEELLSWALLPKSTLNLPSSTRTVRALVEV 580
Query: 180 EAFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLSLTS 239
EAF L AED+++V FR K K++ + R+YS WRTWAA IQ AWRRYK R+ +
Sbjct: 581 EAFALRAEDLKFVANQFRRLHSK-KLQHTFRFYSHHWRTWAACFIQAAWRRYKRRVMENN 639
Query: 240 LSFI 243
L+ I
Sbjct: 640 LTAI 643
>gb|AAD29827.1| putative cyclic nucleotide and calmodulin-regulated ion channel
protein [Arabidopsis thaliana]
gi|38503241|sp|Q9SL29|CNG15_ARATH Putative cyclic
nucleotide-gated ion channel 15 (Cyclic nucleotide-and
calmodulin-regulated ion channel 15)
gi|15226370|ref|NP_180393.1| cyclic nucleotide-regulated
ion channel, putative (CNGC15) [Arabidopsis thaliana]
Length = 678
Score = 220 bits (561), Expect = 3e-56
Identities = 112/241 (46%), Positives = 156/241 (64%), Gaps = 3/241 (1%)
Query: 2 FLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNLP 61
+L +TT + + ++R + E WM RQLP LRQ VR Y++ +W A RGVDE ++ +LP
Sbjct: 391 YLQSTTMRLEEWRIRRTDTEQWMHHRQLPPELRQAVRKYDQYKWLATRGVDEEALLISLP 450
Query: 62 QGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRMLF 121
LRRDIK HLC DLVR+VPLF MD+ +L+ IC+R+K + T+G + REGDPV MLF
Sbjct: 451 LDLRRDIKRHLCFDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLF 510
Query: 122 VVRGHLQS--SQDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETT 179
++RGHL S + R G + C +GPG+F G+ELL+W L + LP S+ T+ +
Sbjct: 511 IIRGHLDSYTTNGGRTGFFNSCLIGPGDFCGEELLTWALDPRPVVILPSSTRTVKAICEV 570
Query: 180 EAFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLSLTS 239
EAF L+AED+++V FR K+ ++ R+YS WRTWAA IQ AWRR++ R T
Sbjct: 571 EAFALKAEDLQFVASQFRRLHTKQ-LRHKFRFYSHQWRTWAACFIQAAWRRHRKRKYKTE 629
Query: 240 L 240
L
Sbjct: 630 L 630
>ref|NP_173051.1| cyclic nucleotide-regulated ion channel, putative (CNGC7)
[Arabidopsis thaliana]
Length = 709
Score = 215 bits (547), Expect = 1e-54
Identities = 107/235 (45%), Positives = 156/235 (65%), Gaps = 3/235 (1%)
Query: 2 FLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNLP 61
+L + T + + M+++ R+ E WM R LPQ LR+RVR Y++ +W RGVDE ++++LP
Sbjct: 393 YLQSLTVRLEEMRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSLP 452
Query: 62 QGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRMLF 121
+ LRRDIK HLCL+LVR+VPLF +MD+ +L+ IC+R+K +FT+ I REGDPV M+F
Sbjct: 453 KDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMF 512
Query: 122 VVRGHLQS--SQDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETT 179
++RG L+S + R G + L G+F G+ELL+W L LP S+ T+ L
Sbjct: 513 IIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEV 572
Query: 180 EAFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHR 234
EAF LEAE++++V FR ++ V+++ R+YS WRTWA+ IQ AWRRY R
Sbjct: 573 EAFALEAEELKFVASQFRRLHSRQ-VQQTFRFYSQQWRTWASCFIQAAWRRYSRR 626
>gb|AAF18496.1| Strong similarity to gb|Y17914 ion channel protein from Arabidopsis
thaliana and is a member of the PF|00914 transmembrane
CNG channel family containing a PF|00027 cyclic
nucleotide-binding domain
gi|38503232|sp|Q9S9N5|CNGC7_ARATH Putative cyclic
nucleotide-gated ion channel 7 (Cyclic nucleotide- and
calmodulin-regulated ion channel 7)
Length = 738
Score = 215 bits (547), Expect = 1e-54
Identities = 107/235 (45%), Positives = 156/235 (65%), Gaps = 3/235 (1%)
Query: 2 FLSATTSKKQAMQLRMRNLEWWMRKRQLPQGLRQRVRNYERQRWTAMRGVDECQMIRNLP 61
+L + T + + M+++ R+ E WM R LPQ LR+RVR Y++ +W RGVDE ++++LP
Sbjct: 422 YLQSLTVRLEEMRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSLP 481
Query: 62 QGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVKRMLF 121
+ LRRDIK HLCL+LVR+VPLF +MD+ +L+ IC+R+K +FT+ I REGDPV M+F
Sbjct: 482 KDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMF 541
Query: 122 VVRGHLQS--SQDLRDGVKSYCTLGPGNFSGDELLSWCLRRPFIERLPPSSATLVTLETT 179
++RG L+S + R G + L G+F G+ELL+W L LP S+ T+ L
Sbjct: 542 IIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEV 601
Query: 180 EAFGLEAEDVRYVTQHFRYTFMKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHR 234
EAF LEAE++++V FR ++ V+++ R+YS WRTWA+ IQ AWRRY R
Sbjct: 602 EAFALEAEELKFVASQFRRLHSRQ-VQQTFRFYSQQWRTWASCFIQAAWRRYSRR 655
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.324 0.137 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 474,500,819
Number of Sequences: 2540612
Number of extensions: 18926888
Number of successful extensions: 52278
Number of sequences better than 10.0: 592
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 140
Number of HSP's that attempted gapping in prelim test: 51511
Number of HSP's gapped (non-prelim): 660
length of query: 283
length of database: 863,360,394
effective HSP length: 126
effective length of query: 157
effective length of database: 543,243,282
effective search space: 85289195274
effective search space used: 85289195274
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 74 (33.1 bits)
Lotus: description of TM0590b.4