Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0588c.4
         (766 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_177298.1| pentatricopeptide (PPR) repeat-containing prote...   770  0.0
dbj|BAD67155.1| PPR986-12 [Physcomitrella patens]                     453  e-126
ref|XP_450291.1| pentatricopeptide (PPR) repeat-containing prote...   449  e-124
dbj|BAD67154.1| PPR868-14 [Physcomitrella patens]                     444  e-123
ref|NP_918853.1| P0458A05.10 [Oryza sativa (japonica cultivar-gr...   440  e-121
dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protei...   440  e-121
gb|AAP54374.1| hypothetical protein [Oryza sativa (japonica cult...   430  e-119
gb|AAL73981.1| putative vegetative storage protein [Sorghum bico...   424  e-117
ref|NP_914402.1| P0020E09.15 [Oryza sativa (japonica cultivar-gr...   422  e-116
dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa (j...   422  e-116
emb|CAB79788.1| putative protein [Arabidopsis thaliana] gi|57254...   418  e-115
dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thali...   417  e-115
gb|AAC73039.1| putative selenium-binding protein [Arabidopsis th...   416  e-114
ref|NP_917461.1| P0415C01.16 [Oryza sativa (japonica cultivar-gr...   410  e-113
ref|NP_172596.1| pentatricopeptide (PPR) repeat-containing prote...   409  e-112
ref|NP_190486.2| pentatricopeptide (PPR) repeat-containing prote...   408  e-112
ref|NP_188131.1| pentatricopeptide (PPR) repeat-containing prote...   407  e-112
emb|CAB78407.1| putative protein [Arabidopsis thaliana] gi|44552...   407  e-112
ref|NP_193101.2| pentatricopeptide (PPR) repeat-containing prote...   407  e-112
gb|AAF03474.1| hypothetical protein [Arabidopsis thaliana] gi|29...   406  e-111

>ref|NP_177298.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana] gi|12323734|gb|AAG51830.1| hypothetical
           protein; 56014-58251 [Arabidopsis thaliana]
          Length = 745

 Score =  770 bits (1989), Expect = 0.0
 Identities = 387/728 (53%), Positives = 513/728 (70%), Gaps = 18/728 (2%)

Query: 42  IRALSLQGNLEEALSLLYTHDKHILTHSSLSLQTYASLFHACAKNKCLQQGMALHNYILH 101
           +R L   G++  A+SL Y+    +      S Q YA+LF ACA+ + L  G+ LH+++L 
Sbjct: 33  LRTLVRSGDIRRAVSLFYSAPVELQ-----SQQAYAALFQACAEQRNLLDGINLHHHMLS 87

Query: 102 KDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQMPRRNIVSWTALISGYAQCGLIRECF 161
                  ++ L N L+NMY+KCG++ YAR VFD MP RN+VSWTALI+GY Q G  +E F
Sbjct: 88  HPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGF 147

Query: 162 YLFSGLLAHYRPNEFAFASLLSACEEHDIKCGMQVHAVALKISLDASVYVANALITMYSK 221
            LFS +L+H  PNEF  +S+L++C       G QVH +ALK+ L  S+YVANA+I+MY +
Sbjct: 148 CLFSSMLSHCFPNEFTLSSVLTSCRYEP---GKQVHGLALKLGLHCSIYVANAVISMYGR 204

Query: 222 CSGGFHGGYDPTGDDAWTMFKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIG 281
           C  G          +AWT+F++++F+NL++WNSMIA FQ   LG KAI +F  M+  G+G
Sbjct: 205 CHDG------AAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVG 258

Query: 282 FDRATLLSVFSSLNECSAFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANLGG 341
           FDRATLL++ SSL + S      +  + C  LH L  K+GL+++ EV TAL+K Y+ +  
Sbjct: 259 FDRATLLNICSSLYKSSDLVPNEVS-KCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLE 317

Query: 342 QISDCYRLFLDTSGKQDIVSWTAIITVLADQDPEQAFLLFCQLHRENFVPDWHTFSIALK 401
             +DCY+LF++ S  +DIV+W  IIT  A  DPE+A  LF QL +E   PDW+TFS  LK
Sbjct: 318 DYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPERAIHLFGQLRQEKLSPDWYTFSSVLK 377

Query: 402 ACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVS 461
           ACA  VT + AL++H+QVIK GF  DTVL+N+LIHAYA+ GSL L  +VFD+M   D+VS
Sbjct: 378 ACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVS 437

Query: 462 WNSMLKSYALHGKAKDALELFKKLDVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNH 521
           WNSMLK+Y+LHG+    L +F+K+D++PDS TF+ALLSACSHAG VEEG+ IF SM +  
Sbjct: 438 WNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKP 497

Query: 522 GIVPQLDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGETRLARIA 581
             +PQL+HYAC++D+  R  + +EAE++I  MPM PD+V+W +LLGSCRKHG TRL ++A
Sbjct: 498 ETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLA 557

Query: 582 AEKFKEL-DPKNSLGYVQMSNIYSSEGSFIEAGLIRKEMRDSRVKKQPGLSWVEVGKQVH 640
           A+K KEL +P NS+ Y+QMSNIY++EGSF EA L  KEM   RV+K+P LSW E+G +VH
Sbjct: 558 ADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVH 617

Query: 641 EFTSGGHHHPHKEAIQSRLEILIGQLKEMGYVPEITLALYDTE-VEHKEDQLFHHSEKMA 699
           EF SGG H P KEA+   L+ LI  LKEMGYVPE+  A  D E  E +ED L HHSEK+A
Sbjct: 618 EFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLA 677

Query: 700 LVFAIM-NEGNLPCGGNVIKIMKNIRICADCHNFMKLASNLFQKEIVVRDSNRFHHFKNA 758
           L FA+M    +  CG N+I+IMKN RIC DCHNFMKLAS L  KEI++RDSNRFHHFK++
Sbjct: 678 LAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDS 737

Query: 759 TCSCNDYW 766
           +CSCNDYW
Sbjct: 738 SCSCNDYW 745


>dbj|BAD67155.1| PPR986-12 [Physcomitrella patens]
          Length = 986

 Score =  453 bits (1166), Expect = e-126
 Identities = 264/733 (36%), Positives = 405/733 (55%), Gaps = 34/733 (4%)

Query: 40  AQIRALSLQGNLEEALSLLYTHDKHILTHSSLSLQTYASLFHACAKNKCLQQGMALHNYI 99
           + I  L+  G  ++A +L    ++  +    ++   + SL  AC   + L+QG  +H  +
Sbjct: 282 SMITGLARHGRFKQACNLFQRMEEEGVQPDKVA---FVSLLRACNHPEALEQGKKVHARM 338

Query: 100 LHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQMPRRNIVSWTALISGYAQCGLIRE 159
             K+     ++++   +++MY+KCG +E A  VFD +  RN+VSWTA+I+G+AQ G I E
Sbjct: 339 --KEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDE 396

Query: 160 CFYLFSGLL-AHYRPNEFAFASLLSACEEHD-IKCGMQVHAVALKISLDASVYVANALIT 217
            F  F+ ++ +   PN   F S+L AC     +K G Q+    ++    +   V  AL++
Sbjct: 397 AFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLS 456

Query: 218 MYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYC 277
           MY+KC          +  DA  +F+ +  +N+++WN+MI  +      D A+  F  +  
Sbjct: 457 MYAKCG---------SLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLK 507

Query: 278 SGIGFDRATLLSVFSSLNECSAFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYA 337
            GI  + +T  S+   LN C + D L +       +H L  K GL S++ V  ALV  + 
Sbjct: 508 EGIKPNSSTFTSI---LNVCKSSDSLELGKW----VHFLIMKAGLESDLHVSNALVSMFV 560

Query: 338 NLGGQISDCYRLFLDTSGKQDIVSWTAIITVLADQDPEQ-AFLLFCQLHRENFVPDWHTF 396
           N G  +S    LF D   K+D+VSW  II         Q AF  F  +      PD  TF
Sbjct: 561 NCGDLMS-AKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITF 618

Query: 397 SIALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCC 456
           +  L ACA      +   +H+ + +  F  D ++   LI  Y + GS+  + QVF ++  
Sbjct: 619 TGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPK 678

Query: 457 HDLVSWNSMLKSYALHGKAKDALELFKKLD---VHPDSTTFVALLSACSHAGLVEEGVEI 513
            ++ SW SM+  YA HG+ K+ALELF ++    V PD  TFV  LSAC+HAGL+EEG+  
Sbjct: 679 KNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHH 738

Query: 514 FNSMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHG 573
           F SM +   I P+++HY CMVDL+GR G ++EA + I  M ++PDS +W +LLG+C+ H 
Sbjct: 739 FQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHL 797

Query: 574 ETRLARIAAEKFKELDPKNSLGYVQMSNIYSSEGSFIEAGLIRKEMRDSRVKKQPGLSWV 633
              LA  AA+K  ELDP ++  +V +SNIY++ G + E   +RK M D  V K+PG SW+
Sbjct: 798 NVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWI 857

Query: 634 EVGKQVHEFTSGGHHHPHKEAIQSRLEILIGQLKEMGYVPEITLALYDTEVEHKEDQLFH 693
           EV  +VH F S    HP  E I + LE L  +++++GYVP+    L+D E   KE  LF+
Sbjct: 858 EVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFY 917

Query: 694 HSEKMALVFAIMNEGNLPCGGNVIKIMKNIRICADCHNFMKLASNLFQKEIVVRDSNRFH 753
           HSE++A+ + ++    L      I I KN+R+C DCH   K  S + +++I+ RDSNRFH
Sbjct: 918 HSERLAITYGLLKTPPL----TPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFH 973

Query: 754 HFKNATCSCNDYW 766
           HFK+  CSC D+W
Sbjct: 974 HFKDGVCSCGDFW 986



 Score =  240 bits (613), Expect = 1e-61
 Identities = 159/548 (29%), Positives = 281/548 (51%), Gaps = 35/548 (6%)

Query: 39  DAQIRALSLQGNLEEALSLLYTHDKHILTHSSLSLQTYASLFHACAKNKCLQQGMALHNY 98
           +A +  LS  G   EA+ +L   D    +H  +  QTY++L   C K K L  G  ++N+
Sbjct: 79  NAVLNRLSKAGQFNEAMQVLERVDS---SHIQIYRQTYSALLQLCIKFKNLGDGERIYNH 135

Query: 99  ILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQMPRRNIVSWTALISGYAQCGLIR 158
           I  K   +Q D+F+ N L+NMY+KCG+   A+ +FD M  +++ SW  L+ GY Q GL  
Sbjct: 136 I--KKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYE 193

Query: 159 ECFYLFSGLLA-HYRPNEFAFASLLSAC-EEHDIKCGMQVHAVALKISLDASVYVANALI 216
           E F L   ++    +P++  F S+L+AC +  ++  G +++ + LK   D  ++V  ALI
Sbjct: 194 EAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALI 253

Query: 217 TMYSKCSGGFHGGYDPTGD--DAWTMFKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAH 274
            M+ KC           GD  DA  +F ++  R+L++W SMI G    G   +A  LF  
Sbjct: 254 NMHIKC-----------GDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQR 302

Query: 275 MYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVK 334
           M   G+  D+   +S+  + N   A ++          +H    + G  +E+ V TA++ 
Sbjct: 303 MEEEGVQPDKVAFVSLLRACNHPEALEQGK-------KVHARMKEVGWDTEIYVGTAILS 355

Query: 335 SYANLGGQISDCYRLFLDTSGKQDIVSWTAIITVLADQDP-EQAFLLFCQLHRENFVPDW 393
            Y    G + D   +F D    +++VSWTA+I   A     ++AFL F ++      P+ 
Sbjct: 356 MYTKC-GSMEDALEVF-DLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNR 413

Query: 394 HTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDE 453
            TF   L AC+     ++   +   +I+ G+  D  +  AL+  YA+ GSL  + +VF++
Sbjct: 414 VTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEK 473

Query: 454 MCCHDLVSWNSMLKSYALHGKAKDALELFKKL---DVHPDSTTFVALLSACSHAGLVEEG 510
           +   ++V+WN+M+ +Y  H +  +AL  F+ L    + P+S+TF ++L+ C  +  +E G
Sbjct: 474 ISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG 533

Query: 511 VEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCR 570
             + + +    G+   L     +V ++   G +  A++L + MP K D V W++++    
Sbjct: 534 KWV-HFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFV 591

Query: 571 KHGETRLA 578
           +HG+ ++A
Sbjct: 592 QHGKNQVA 599



 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 57/196 (29%), Positives = 106/196 (54%), Gaps = 5/196 (2%)

Query: 395 TFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEM 454
           T+S  L+ C  F        +++ + K G Q D  + N LI+ YA+ G+   ++Q+FD+M
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDM 171

Query: 455 CCHDLVSWNSMLKSYALHGKAKDALELFKKL---DVHPDSTTFVALLSACSHAGLVEEGV 511
              D+ SWN +L  Y  HG  ++A +L +++    V PD  TFV++L+AC+ A  V++G 
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGR 231

Query: 512 EIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRK 571
           E++N +    G    L     +++++ + G I +A  +   +P + D V W+S++    +
Sbjct: 232 ELYNLIL-KAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTR-DLVTWTSMITGLAR 289

Query: 572 HGETRLARIAAEKFKE 587
           HG  + A    ++ +E
Sbjct: 290 HGRFKQACNLFQRMEE 305


>ref|XP_450291.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa (japonica cultivar-group)]
           gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa (japonica
           cultivar-group)] gi|47848472|dbj|BAD22327.1|
           pentatricopeptide (PPR) repeat-containing protein-like
           [Oryza sativa (japonica cultivar-group)]
          Length = 877

 Score =  449 bits (1154), Expect = e-124
 Identities = 255/701 (36%), Positives = 390/701 (55%), Gaps = 38/701 (5%)

Query: 76  YASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQ 135
           ++ + +AC  ++ +  G  +H  ++      + D+F  N LV+MY K G ++ A  +F++
Sbjct: 205 FSCVVNACTGSRNIDAGRQVHAMVVRMG--YEKDVFTANALVDMYVKMGRVDIASVIFEK 262

Query: 136 MPRRNIVSWTALISGYAQCGLIRECFYLF-----SGLLAHYRPNEFAFASLLSACEEHD- 189
           MP  ++VSW ALISG    G       L      SGL+    PN F  +S+L AC     
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLV----PNVFMLSSILKACAGAGA 318

Query: 190 IKCGMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNL 249
              G Q+H   +K + D+  Y+   L+ MY+K         +   DDA  +F  M  R+L
Sbjct: 319 FDLGRQIHGFMIKANADSDDYIGVGLVDMYAK---------NHFLDDAMKVFDWMSHRDL 369

Query: 250 ISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRN 309
           I WN++I+G    G  D+A  +F  +   G+G +R TL +V  S     A          
Sbjct: 370 ILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATR----- 424

Query: 310 CFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITVL 369
              +H LA K G I +  VV  L+ SY      +SD  R+F + S   DI++ T++IT L
Sbjct: 425 --QVHALAEKIGFIFDAHVVNGLIDSYWKCSC-LSDAIRVFEECSSG-DIIAVTSMITAL 480

Query: 370 ADQDP-EQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDT 428
           +  D  E A  LF ++ R+   PD    S  L ACA     +Q   VH+ +IKR F  D 
Sbjct: 481 SQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDA 540

Query: 429 VLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELFKKL--- 485
              NAL++ YA+ GS+  +E  F  +    +VSW++M+   A HG  K ALELF ++   
Sbjct: 541 FAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDE 600

Query: 486 DVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISE 545
            ++P+  T  ++L AC+HAGLV+E    FNSM +  GI    +HY+CM+DL GR GK+ +
Sbjct: 601 GINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 660

Query: 546 AEDLIHTMPMKPDSVIWSSLLGSCRKHGETRLARIAAEKFKELDPKNSLGYVQMSNIYSS 605
           A +L+++MP + ++ +W +LLG+ R H +  L ++AAEK   L+P+ S  +V ++N Y+S
Sbjct: 661 AMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYAS 720

Query: 606 EGSFIEAGLIRKEMRDSRVKKQPGLSWVEVGKQVHEFTSGGHHHPHKEAIQSRLEILIGQ 665
            G + E   +RK M+DS +KK+P +SWVEV  +VH F  G   HP  + I S+L+ L   
Sbjct: 721 SGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDL 780

Query: 666 LKEMGYVPEITLALYDTEVEHKEDQLFHHSEKMALVFAIMNEGNLPCGGNVIKIMKNIRI 725
           + + GY+P + + L+D +   KE  L HHSE++A+ FA+++       G  I++ KN+RI
Sbjct: 781 MSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTP----PGAPIRVKKNLRI 836

Query: 726 CADCHNFMKLASNLFQKEIVVRDSNRFHHFKNATCSCNDYW 766
           C DCH   K  SN+  +EI++RD NRFHHF++ TCSC DYW
Sbjct: 837 CRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  167 bits (422), Expect = 2e-39
 Identities = 135/484 (27%), Positives = 231/484 (46%), Gaps = 39/484 (8%)

Query: 108 NDLFLTNHLVNMYSKCGHLEYARYVFDQM-PRRNIVSWTALISGYA---QCGLIRECF-- 161
           +D+F+ N LV MY   G ++ AR VFD+    RN VSW  L+S Y    QCG   + F  
Sbjct: 133 SDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 192

Query: 162 YLFSGLLAHYRPNEFAFASLLSACE-EHDIKCGMQVHAVALKISLDASVYVANALITMYS 220
            ++SG+    +P EF F+ +++AC    +I  G QVHA+ +++  +  V+ ANAL+ MY 
Sbjct: 193 MVWSGI----QPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYV 248

Query: 221 KCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSGI 280
           K             D A  +F+ M   +++SWN++I+G    G   +AI L   M  SG+
Sbjct: 249 KMG---------RVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGL 299

Query: 281 GFDRATLLSVFSSLNECSAFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANLG 340
             +   L S+  +     AFD           +H    K    S+  +   LV  YA   
Sbjct: 300 VPNVFMLSSILKACAGAGAFDLGR-------QIHGFMIKANADSDDYIGVGLVDMYAK-N 351

Query: 341 GQISDCYRLFLDTSGKQDIVSWTAIITVLADQD-PEQAFLLFCQLHRENFVPDWHTFSIA 399
             + D  ++F D    +D++ W A+I+  +     ++AF +F  L +E    +  T +  
Sbjct: 352 HFLDDAMKVF-DWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAV 410

Query: 400 LKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDL 459
           LK+ A          VH+   K GF  D  + N LI +Y +   L+ + +VF+E    D+
Sbjct: 411 LKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDI 470

Query: 460 VSWNSMLKSYALHGKAKDALELFKKL---DVHPDSTTFVALLSACSHAGLVEEGVEIFNS 516
           ++  SM+ + +     + A++LF ++    + PD     +LL+AC+     E+G ++   
Sbjct: 471 IAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 530

Query: 517 MSDNHGIVPQLDHYA--CMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGE 574
           +     +    D +A   +V  Y + G I +AE    ++P +   V WS+++G   +HG 
Sbjct: 531 LIKRQFM---SDAFAGNALVYTYAKCGSIEDAELAFSSLPER-GVVSWSAMIGGLAQHGH 586

Query: 575 TRLA 578
            + A
Sbjct: 587 GKRA 590



 Score =  157 bits (396), Expect = 2e-36
 Identities = 151/527 (28%), Positives = 235/527 (43%), Gaps = 50/527 (9%)

Query: 112 LTNHLVNMYSKCGHLEYARYVFDQMPRRNIVSWTALISGYAQCGLIRECFYLFSGLLAH- 170
           L NHL++ YSKC     AR VFD++P    VSW++L++ Y+  GL R     F G+ A  
Sbjct: 39  LRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG 98

Query: 171 YRPNEFAFASLLSACEEHDIKCGMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGY 230
              NEFA   +L      D + G QVHA+A+     + V+VANAL+ MY    GGF  G+
Sbjct: 99  VCCNEFALPVVLKCVP--DAQLGAQVHAMAMATGFGSDVFVANALVAMY----GGF--GF 150

Query: 231 DPTGDDAWTMF-KSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLS 289
               DDA  +F ++   RN +SWN +++ +        AI++F  M  SGI   + T   
Sbjct: 151 ---MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGI---QPTEFG 204

Query: 290 VFSSLNECSAFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRL 349
               +N C+    ++   +    +H +  + G   +V    ALV  Y  +G    D   +
Sbjct: 205 FSCVVNACTGSRNIDAGRQ----VHAMVVRMGYEKDVFTANALVDMYVKMGR--VDIASV 258

Query: 350 FLDTSGKQDIVSWTAIIT--VLADQDPEQAFLLFCQLHRENFVPDWHTFSIALKACAYFV 407
             +     D+VSW A+I+  VL   D  +A  L  Q+     VP+    S  LKACA   
Sbjct: 259 IFEKMPDSDVVSWNALISGCVLNGHD-HRAIELLLQMKSSGLVPNVFMLSSILKACAGAG 317

Query: 408 TEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLK 467
                  +H  +IK     D  +   L+  YA++  L  + +VFD M   DL+ WN+++ 
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS 377

Query: 468 SYALHGKAKDALELF---KKLDVHPDSTTFVAL------LSACSHAGLVEEGVEIFNSMS 518
             +  G+  +A  +F   +K  +  + TT  A+      L A S    V    E    + 
Sbjct: 378 GCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIF 437

Query: 519 DNHGIVPQLDHY---ACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGET 575
           D H +   +D Y   +C+ D   RV +   + D+I    M        + L  C  HGE 
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDAI-RVFEECSSGDIIAVTSM-------ITALSQC-DHGEG 488

Query: 576 RLARIAAEKFKELDPK----NSLGYVQMSNIYSSEGSFIEAGLIRKE 618
            +        K L+P     +SL     S     +G  + A LI+++
Sbjct: 489 AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 535



 Score =  122 bits (305), Expect = 6e-26
 Identities = 100/387 (25%), Positives = 172/387 (43%), Gaps = 33/387 (8%)

Query: 193 GMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISW 252
           G  +HA  LK    AS+   N LI+ YSKC              A  +F  +     +SW
Sbjct: 23  GAHLHANLLKSGFLASL--RNHLISFYSKCRRPCC---------ARRVFDEIPDPCHVSW 71

Query: 253 NSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRNCFV 312
           +S++  +   GL   AI+ F  M   G+  +   L  V   + +     ++         
Sbjct: 72  SSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQV--------- 122

Query: 313 LHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITVLADQ 372
            H +A  TG  S+V V  ALV  Y   G  + D  R+F +   +++ VSW  +++     
Sbjct: 123 -HAMAMATGFGSDVFVANALVAMYGGFGF-MDDARRVFDEAGSERNAVSWNGLMSAYVKN 180

Query: 373 DP-EQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTVLS 431
           D    A  +F ++      P    FS  + AC           VH+ V++ G++KD   +
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTA 240

Query: 432 NALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALEL---FKKLDVH 488
           NAL+  Y + G + ++  +F++M   D+VSWN+++    L+G    A+EL    K   + 
Sbjct: 241 NALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLV 300

Query: 489 PDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHY--ACMVDLYGRVGKISEA 546
           P+     ++L AC+ AG  + G +I   M   +      D Y    +VD+Y +   + +A
Sbjct: 301 PNVFMLSSILKACAGAGAFDLGRQIHGFMIKANA---DSDDYIGVGLVDMYAKNHFLDDA 357

Query: 547 EDLIHTMPMKPDSVIWSSLLGSCRKHG 573
             +   M  + D ++W++L+  C  HG
Sbjct: 358 MKVFDWMSHR-DLILWNALISGC-SHG 382


>dbj|BAD67154.1| PPR868-14 [Physcomitrella patens]
          Length = 868

 Score =  444 bits (1143), Expect = e-123
 Identities = 254/733 (34%), Positives = 393/733 (52%), Gaps = 64/733 (8%)

Query: 75  TYASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFD 134
           T+ S+  AC     L++G  +H  +  K   ++ D+ +   L+ MYSKCG +  A  VF 
Sbjct: 159 TFLSILKACNNYSILEKGRKIHTIV--KAMGMETDVAVATALITMYSKCGEISVACEVFH 216

Query: 135 QMPRRNIVSWTALISGYAQCGLIRECFYLFSGLL-AHYRPNEFAFASLLSACEEHD-IKC 192
           +M  RN+VSWTA+I   AQ   + E F L+  +L A   PN   F SLL++C   + +  
Sbjct: 217 KMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNR 276

Query: 193 GMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISW 252
           G ++H+   +  L+  + VANALITMY KC+         +  +A  +F  M  R++ISW
Sbjct: 277 GRRIHSHISERGLETDMIVANALITMYCKCN---------SVQEAREIFDRMSKRDVISW 327

Query: 253 NSMIAGFQFRGLGDK-----AIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPL 307
           ++MIAG+   G  DK       +L   M   G+  ++ T +S+   L  C+A   L    
Sbjct: 328 SAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSI---LRACTAHGALEQGR 384

Query: 308 RNCFVLHCLATKTGLISEVEVVTALVKSYANLG--------------------------- 340
           +    +H   +K G   +  + TA+   YA  G                           
Sbjct: 385 Q----IHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMY 440

Query: 341 ---GQISDCYRLFLDTSGKQDIVSWTAIITVLADQ-DPEQAFLLFCQLHRENFVPDWHTF 396
              G +S   ++F +   + ++VSW  +I   A   D  + F L   +  E F PD  T 
Sbjct: 441 IKCGDLSSAEKVFSEMPTR-NVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTV 499

Query: 397 SIALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCC 456
              L+AC      ++   VH++ +K G + DTV++ +LI  Y++ G +A +  VFD+M  
Sbjct: 500 ITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSN 559

Query: 457 HDLVSWNSMLKSYALHGKAKDALELFKKL---DVHPDSTTFVALLSACSHAGLVEEGVEI 513
            D V+WN+ML  Y  HG   +A++LFK++    V P+  T  A++SACS AGLV+EG EI
Sbjct: 560 RDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREI 619

Query: 514 FNSMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHG 573
           F  M ++  + P+  HY CMVDL GR G++ EAE+ I +MP +PD  +W +LLG+C+ H 
Sbjct: 620 FRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHN 679

Query: 574 ETRLARIAAEKFKELDPKNSLGYVQMSNIYSSEGSFIEAGLIRKEMRDSRVKKQPGLSWV 633
             +LA  AA    EL+P  +  Y+ +SNIY+  G + ++  +R+ M D  +KK  G S +
Sbjct: 680 NVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSI 739

Query: 634 EVGKQVHEFTSGGHHHPHKEAIQSRLEILIGQLKEMGYVPEITLALYDTEVEHKEDQLFH 693
           E+  ++H F +    HP  +AI + LE L  ++KE GY P++   L+D +   KE  L H
Sbjct: 740 EIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCH 799

Query: 694 HSEKMALVFAIMNEGNLPCGGNVIKIMKNIRICADCHNFMKLASNLFQKEIVVRDSNRFH 753
           HSEK+A+ + ++   +    G  I+IMKN+R+C DCH   K  S + ++EIV RD+NRFH
Sbjct: 800 HSEKLAIAYGLLKTPS----GTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFH 855

Query: 754 HFKNATCSCNDYW 766
           +F N TCSC D+W
Sbjct: 856 YFNNGTCSCGDFW 868



 Score =  210 bits (535), Expect = 1e-52
 Identities = 160/578 (27%), Positives = 274/578 (46%), Gaps = 71/578 (12%)

Query: 41  QIRALSLQGNLEEALSLL-YTHDKHILTHSSLSLQTYASLFHACAKNKCLQQGMALHNYI 99
           ++  L   G L EA+ LL     + +L +S+    TY  +   CAK +  + G  +H  +
Sbjct: 27  EVWRLCKAGRLREAIQLLGIIKQRGLLVNSN----TYGCVIEHCAKARRFEDGKMVHKQL 82

Query: 100 LHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQMPRRNIVSWTALISGYAQCGLIRE 159
              +  ++ D++L N L+N YSK   +  A  VF +M  R++V+W+++I+ YA      +
Sbjct: 83  --DELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAK 140

Query: 160 CFYLFSGLL-AHYRPNEFAFASLLSACEEHDI-KCGMQVHAVALKISLDASVYVANALIT 217
            F  F  +  A+  PN   F S+L AC  + I + G ++H +   + ++  V VA ALIT
Sbjct: 141 AFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALIT 200

Query: 218 MYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWNSMI-AGFQFRGLGDKAIRLFAHMY 276
           MYSKC              A  +F  M  RN++SW ++I A  Q R L ++A  L+  M 
Sbjct: 201 MYSKCG---------EISVACEVFHKMTERNVVSWTAIIQANAQHRKL-NEAFELYEQML 250

Query: 277 CSGIGFDRATLLSVFSSLNECSAFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSY 336
            +GI  +  T +S+   LN C+  + LN   R    +H   ++ GL +++ V  AL+  Y
Sbjct: 251 QAGISPNAVTFVSL---LNSCNTPEALNRGRR----IHSHISERGLETDMIVANALITMY 303

Query: 337 ANLGGQISDCYRLFLDTSGKQDIVSWTAIITVLAD------QDPEQAFLLFCQLHRENFV 390
                 + +   +F D   K+D++SW+A+I   A       +  ++ F L  ++ RE   
Sbjct: 304 CKC-NSVQEAREIF-DRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVF 361

Query: 391 PDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQV 450
           P+  TF   L+AC      +Q   +H+++ K GF+ D  L  A+ + YA+ GS+  +EQV
Sbjct: 362 PNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQV 421

Query: 451 FDEMC----------------CHDL---------------VSWNSMLKSYALHGKAKDAL 479
           F +M                 C DL               VSWN M+  YA +G      
Sbjct: 422 FSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVF 481

Query: 480 ELFKKLDV---HPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDL 536
           EL   +      PD  T + +L AC     +E G ++ ++ +   G+         ++ +
Sbjct: 482 ELLSSMKAEGFQPDRVTVITILEACGALAGLERG-KLVHAEAVKLGLESDTVVATSLIGM 540

Query: 537 YGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGE 574
           Y + G+++EA  +   M  + D+V W+++L    +HG+
Sbjct: 541 YSKCGQVAEARTVFDKMSNR-DTVAWNAMLAGYGQHGD 577


>ref|NP_918853.1| P0458A05.10 [Oryza sativa (japonica cultivar-group)]
          Length = 784

 Score =  440 bits (1131), Expect = e-121
 Identities = 253/701 (36%), Positives = 389/701 (55%), Gaps = 38/701 (5%)

Query: 76  YASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQ 135
           ++ + +AC  ++ ++ G  +H  ++        D+F  N LV+MY K G ++ A  +F++
Sbjct: 112 FSCVVNACTGSRNIEAGRQVHAMVVRMG--YDKDVFTANALVDMYMKMGRVDIASVIFEK 169

Query: 136 MPRRNIVSWTALISGYAQCGLIRECFYL-----FSGLLAHYRPNEFAFASLLSACEEHD- 189
           MP  ++VSW ALISG    G       L     +SGL+    PN F  +S+L AC     
Sbjct: 170 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV----PNVFTLSSILKACSGAGA 225

Query: 190 IKCGMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNL 249
              G Q+H   +K + D+  Y+   L+ MY+K         +   DDA  +F  M  R+L
Sbjct: 226 FDLGRQIHGFMIKANADSDDYIGVGLVDMYAK---------NHFLDDARKVFDWMFHRDL 276

Query: 250 ISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRN 309
           I  N++I+G    G  D+A+ LF  +   G+G +R TL +V  S     A          
Sbjct: 277 ILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTR----- 331

Query: 310 CFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITVL 369
              +H LA K G I +  VV  L+ SY      +SD  R+F + S   DI++ T++IT L
Sbjct: 332 --QVHALAVKIGFIFDAHVVNGLIDSYWKCSC-LSDANRVFEECSSG-DIIACTSMITAL 387

Query: 370 ADQDP-EQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDT 428
           +  D  E A  LF ++ R+   PD    S  L ACA     +Q   VH+ +IKR F  D 
Sbjct: 388 SQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDA 447

Query: 429 VLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELFKKL--- 485
              NAL++ YA+ GS+  +E  F  +    +VSW++M+   A HG  K ALELF ++   
Sbjct: 448 FAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDE 507

Query: 486 DVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISE 545
            ++P+  T  ++L AC+HAGLV+E    FNSM +  GI    +HY+CM+DL GR GK+ +
Sbjct: 508 GINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 567

Query: 546 AEDLIHTMPMKPDSVIWSSLLGSCRKHGETRLARIAAEKFKELDPKNSLGYVQMSNIYSS 605
           A +L+++MP + ++ IW +LLG+ R H +  L ++AAEK   L+P+ S  +V ++N Y+S
Sbjct: 568 AMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYAS 627

Query: 606 EGSFIEAGLIRKEMRDSRVKKQPGLSWVEVGKQVHEFTSGGHHHPHKEAIQSRLEILIGQ 665
            G + E   +RK M+DS +KK+P +SW+EV  +VH F  G   HP  + I ++L  L   
Sbjct: 628 AGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDL 687

Query: 666 LKEMGYVPEITLALYDTEVEHKEDQLFHHSEKMALVFAIMNEGNLPCGGNVIKIMKNIRI 725
           + + G+VP + + L+D +   KE  L HHSE++A+ FA+++       G  I++ KN+RI
Sbjct: 688 MSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTP----PGAPIRVKKNLRI 743

Query: 726 CADCHNFMKLASNLFQKEIVVRDSNRFHHFKNATCSCNDYW 766
           C DCH   K  S +  +EI++RD NRFHHF++ TCSC DYW
Sbjct: 744 CRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 784



 Score =  169 bits (427), Expect = 4e-40
 Identities = 135/484 (27%), Positives = 231/484 (46%), Gaps = 39/484 (8%)

Query: 108 NDLFLTNHLVNMYSKCGHLEYARYVFDQM-PRRNIVSWTALISGYA---QCGLIRECF-- 161
           +D+F+ N LV MY   G ++ AR VF++    RN VSW  L+S Y    QCG   + F  
Sbjct: 40  SDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 99

Query: 162 YLFSGLLAHYRPNEFAFASLLSACE-EHDIKCGMQVHAVALKISLDASVYVANALITMYS 220
            ++SG+    +P EF F+ +++AC    +I+ G QVHA+ +++  D  V+ ANAL+ MY 
Sbjct: 100 MVWSGI----QPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYM 155

Query: 221 KCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSGI 280
           K             D A  +F+ M   +++SWN++I+G    G   +AI L   M  SG+
Sbjct: 156 KMG---------RVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGL 206

Query: 281 GFDRATLLSVFSSLNECSAFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANLG 340
             +  TL S+  + +   AFD           +H    K    S+  +   LV  YA   
Sbjct: 207 VPNVFTLSSILKACSGAGAFDLGR-------QIHGFMIKANADSDDYIGVGLVDMYAK-- 257

Query: 341 GQISDCYRLFLDTSGKQDIVSWTAIITVLADQD-PEQAFLLFCQLHRENFVPDWHTFSIA 399
               D  R   D    +D++   A+I+  +     ++A  LF +L +E    +  T +  
Sbjct: 258 NHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAV 317

Query: 400 LKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDL 459
           LK+ A          VH+  +K GF  D  + N LI +Y +   L+ + +VF+E    D+
Sbjct: 318 LKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDI 377

Query: 460 VSWNSMLKSYALHGKAKDALELFKKL---DVHPDSTTFVALLSACSHAGLVEEGVEIFNS 516
           ++  SM+ + +     + A++LF ++    + PD     +LL+AC+     E+G ++   
Sbjct: 378 IACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 437

Query: 517 MSDNHGIVPQLDHYA--CMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGE 574
           +     +    D +A   +V  Y + G I +AE    ++P +   V WS+++G   +HG 
Sbjct: 438 LIKRQFM---SDAFAGNALVYTYAKCGSIEDAELAFSSLPER-GVVSWSAMIGGLAQHGH 493

Query: 575 TRLA 578
            + A
Sbjct: 494 GKRA 497



 Score =  115 bits (287), Expect = 7e-24
 Identities = 117/457 (25%), Positives = 201/457 (43%), Gaps = 35/457 (7%)

Query: 174 NEFAFASLLSACEEHDIKCGMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPT 233
           NEFA   +L      D + G QVHA+A+     + V+VANAL+ MY    GGF  G+   
Sbjct: 9   NEFALPVVLKCVP--DARLGAQVHAMAMATGFGSDVFVANALVAMY----GGF--GF--- 57

Query: 234 GDDAWTMFKSMEF-RNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFS 292
            DDA  +F   +  RN +SWN +++ +        AI++F  M  SGI   + T      
Sbjct: 58  MDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGI---QPTEFGFSC 114

Query: 293 SLNECSAFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLD 352
            +N C+    +    +    +H +  + G   +V    ALV  Y  +G    D   +  +
Sbjct: 115 VVNACTGSRNIEAGRQ----VHAMVVRMGYDKDVFTANALVDMYMKMGR--VDIASVIFE 168

Query: 353 TSGKQDIVSWTAIIT--VLADQDPEQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQ 410
                D+VSW A+I+  VL   D  +A  L  Q+     VP+  T S  LKAC+      
Sbjct: 169 KMPDSDVVSWNALISGCVLNGHD-HRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFD 227

Query: 411 QALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYA 470
               +H  +IK     D  +   L+  YA++  L  + +VFD M   DL+  N+++   +
Sbjct: 228 LGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCS 287

Query: 471 LHGKAKDALELF---KKLDVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQL 527
             G+  +AL LF   +K  +  + TT  A+L + +         ++ ++++   G +   
Sbjct: 288 HGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQV-HALAVKIGFIFDA 346

Query: 528 DHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRK--HGETRLARIAAEKF 585
                ++D Y +   +S+A  +        D +  +S++ +  +  HGE  +        
Sbjct: 347 HVVNGLIDSYWKCSCLSDANRVFEEC-SSGDIIACTSMITALSQCDHGEGAIKLFMEMLR 405

Query: 586 KELDPK----NSLGYVQMSNIYSSEGSFIEAGLIRKE 618
           K L+P     +SL     S     +G  + A LI+++
Sbjct: 406 KGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 442


>dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa (japonica cultivar-group)]
          Length = 877

 Score =  440 bits (1131), Expect = e-121
 Identities = 253/701 (36%), Positives = 389/701 (55%), Gaps = 38/701 (5%)

Query: 76  YASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQ 135
           ++ + +AC  ++ ++ G  +H  ++        D+F  N LV+MY K G ++ A  +F++
Sbjct: 205 FSCVVNACTGSRNIEAGRQVHAMVVRMG--YDKDVFTANALVDMYMKMGRVDIASVIFEK 262

Query: 136 MPRRNIVSWTALISGYAQCGLIRECFYL-----FSGLLAHYRPNEFAFASLLSACEEHD- 189
           MP  ++VSW ALISG    G       L     +SGL+    PN F  +S+L AC     
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV----PNVFTLSSILKACSGAGA 318

Query: 190 IKCGMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNL 249
              G Q+H   +K + D+  Y+   L+ MY+K         +   DDA  +F  M  R+L
Sbjct: 319 FDLGRQIHGFMIKANADSDDYIGVGLVDMYAK---------NHFLDDARKVFDWMFHRDL 369

Query: 250 ISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRN 309
           I  N++I+G    G  D+A+ LF  +   G+G +R TL +V  S     A          
Sbjct: 370 ILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTR----- 424

Query: 310 CFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITVL 369
              +H LA K G I +  VV  L+ SY      +SD  R+F + S   DI++ T++IT L
Sbjct: 425 --QVHALAVKIGFIFDAHVVNGLIDSYWKCSC-LSDANRVFEECSSG-DIIACTSMITAL 480

Query: 370 ADQDP-EQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDT 428
           +  D  E A  LF ++ R+   PD    S  L ACA     +Q   VH+ +IKR F  D 
Sbjct: 481 SQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDA 540

Query: 429 VLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELFKKL--- 485
              NAL++ YA+ GS+  +E  F  +    +VSW++M+   A HG  K ALELF ++   
Sbjct: 541 FAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDE 600

Query: 486 DVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISE 545
            ++P+  T  ++L AC+HAGLV+E    FNSM +  GI    +HY+CM+DL GR GK+ +
Sbjct: 601 GINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 660

Query: 546 AEDLIHTMPMKPDSVIWSSLLGSCRKHGETRLARIAAEKFKELDPKNSLGYVQMSNIYSS 605
           A +L+++MP + ++ IW +LLG+ R H +  L ++AAEK   L+P+ S  +V ++N Y+S
Sbjct: 661 AMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYAS 720

Query: 606 EGSFIEAGLIRKEMRDSRVKKQPGLSWVEVGKQVHEFTSGGHHHPHKEAIQSRLEILIGQ 665
            G + E   +RK M+DS +KK+P +SW+EV  +VH F  G   HP  + I ++L  L   
Sbjct: 721 AGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDL 780

Query: 666 LKEMGYVPEITLALYDTEVEHKEDQLFHHSEKMALVFAIMNEGNLPCGGNVIKIMKNIRI 725
           + + G+VP + + L+D +   KE  L HHSE++A+ FA+++       G  I++ KN+RI
Sbjct: 781 MSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTP----PGAPIRVKKNLRI 836

Query: 726 CADCHNFMKLASNLFQKEIVVRDSNRFHHFKNATCSCNDYW 766
           C DCH   K  S +  +EI++RD NRFHHF++ TCSC DYW
Sbjct: 837 CRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  169 bits (427), Expect = 4e-40
 Identities = 135/484 (27%), Positives = 231/484 (46%), Gaps = 39/484 (8%)

Query: 108 NDLFLTNHLVNMYSKCGHLEYARYVFDQM-PRRNIVSWTALISGYA---QCGLIRECF-- 161
           +D+F+ N LV MY   G ++ AR VF++    RN VSW  L+S Y    QCG   + F  
Sbjct: 133 SDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 192

Query: 162 YLFSGLLAHYRPNEFAFASLLSACE-EHDIKCGMQVHAVALKISLDASVYVANALITMYS 220
            ++SG+    +P EF F+ +++AC    +I+ G QVHA+ +++  D  V+ ANAL+ MY 
Sbjct: 193 MVWSGI----QPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYM 248

Query: 221 KCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSGI 280
           K             D A  +F+ M   +++SWN++I+G    G   +AI L   M  SG+
Sbjct: 249 KMG---------RVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGL 299

Query: 281 GFDRATLLSVFSSLNECSAFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANLG 340
             +  TL S+  + +   AFD           +H    K    S+  +   LV  YA   
Sbjct: 300 VPNVFTLSSILKACSGAGAFDLGR-------QIHGFMIKANADSDDYIGVGLVDMYAK-- 350

Query: 341 GQISDCYRLFLDTSGKQDIVSWTAIITVLADQD-PEQAFLLFCQLHRENFVPDWHTFSIA 399
               D  R   D    +D++   A+I+  +     ++A  LF +L +E    +  T +  
Sbjct: 351 NHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAV 410

Query: 400 LKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDL 459
           LK+ A          VH+  +K GF  D  + N LI +Y +   L+ + +VF+E    D+
Sbjct: 411 LKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDI 470

Query: 460 VSWNSMLKSYALHGKAKDALELFKKL---DVHPDSTTFVALLSACSHAGLVEEGVEIFNS 516
           ++  SM+ + +     + A++LF ++    + PD     +LL+AC+     E+G ++   
Sbjct: 471 IACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 530

Query: 517 MSDNHGIVPQLDHYA--CMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGE 574
           +     +    D +A   +V  Y + G I +AE    ++P +   V WS+++G   +HG 
Sbjct: 531 LIKRQFM---SDAFAGNALVYTYAKCGSIEDAELAFSSLPER-GVVSWSAMIGGLAQHGH 586

Query: 575 TRLA 578
            + A
Sbjct: 587 GKRA 590



 Score =  153 bits (386), Expect = 2e-35
 Identities = 141/518 (27%), Positives = 235/518 (45%), Gaps = 36/518 (6%)

Query: 114 NHLVNMYSKCGHLEYARYVFDQMPRRNIVSWTALISGYAQCGLIRECFYLFSGLLAH-YR 172
           NHL++ YSKC     AR VFD++P    VSW++L++ Y+  GL R     F G+ A    
Sbjct: 41  NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100

Query: 173 PNEFAFASLLSACEEHDIKCGMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDP 232
            NEFA   +L      D + G QVHA+A+     + V+VANAL+ MY    GGF  G+  
Sbjct: 101 CNEFALPVVLKCVP--DARLGAQVHAMAMATGFGSDVFVANALVAMY----GGF--GF-- 150

Query: 233 TGDDAWTMFKSMEF-RNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVF 291
             DDA  +F   +  RN +SWN +++ +        AI++F  M  SGI   + T     
Sbjct: 151 -MDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGI---QPTEFGFS 206

Query: 292 SSLNECSAFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFL 351
             +N C+    +    +    +H +  + G   +V    ALV  Y  +G    D   +  
Sbjct: 207 CVVNACTGSRNIEAGRQ----VHAMVVRMGYDKDVFTANALVDMYMKMGR--VDIASVIF 260

Query: 352 DTSGKQDIVSWTAIIT--VLADQDPEQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTE 409
           +     D+VSW A+I+  VL   D  +A  L  Q+     VP+  T S  LKAC+     
Sbjct: 261 EKMPDSDVVSWNALISGCVLNGHD-HRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAF 319

Query: 410 QQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSY 469
                +H  +IK     D  +   L+  YA++  L  + +VFD M   DL+  N+++   
Sbjct: 320 DLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGC 379

Query: 470 ALHGKAKDALELF---KKLDVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQ 526
           +  G+  +AL LF   +K  +  + TT  A+L + +         ++ ++++   G +  
Sbjct: 380 SHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQV-HALAVKIGFIFD 438

Query: 527 LDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRK--HGETRLARIAAEK 584
                 ++D Y +   +S+A  +        D +  +S++ +  +  HGE  +       
Sbjct: 439 AHVVNGLIDSYWKCSCLSDANRVFEEC-SSGDIIACTSMITALSQCDHGEGAIKLFMEML 497

Query: 585 FKELDPK----NSLGYVQMSNIYSSEGSFIEAGLIRKE 618
            K L+P     +SL     S     +G  + A LI+++
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 535



 Score =  118 bits (295), Expect = 8e-25
 Identities = 101/387 (26%), Positives = 170/387 (43%), Gaps = 33/387 (8%)

Query: 193 GMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISW 252
           G  +HA  LK    AS    N LI+ YSKC              A  +F  +     +SW
Sbjct: 23  GAHLHASLLKSGSLASF--RNHLISFYSKCRRPCC---------ARRVFDEIPDPCHVSW 71

Query: 253 NSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRNCFV 312
           +S++  +   GL   AI+ F  M   G+  +   L  V   + +     ++         
Sbjct: 72  SSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQV--------- 122

Query: 313 LHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITVLADQ 372
            H +A  TG  S+V V  ALV  Y   G  + D  R+F +   +++ VSW  +++     
Sbjct: 123 -HAMAMATGFGSDVFVANALVAMYGGFGF-MDDARRVFNEADSERNAVSWNGLMSAYVKN 180

Query: 373 DP-EQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTVLS 431
           D    A  +F ++      P    FS  + AC      +    VH+ V++ G+ KD   +
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTA 240

Query: 432 NALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALEL---FKKLDVH 488
           NAL+  Y + G + ++  +F++M   D+VSWN+++    L+G    A+EL    K   + 
Sbjct: 241 NALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV 300

Query: 489 PDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHY--ACMVDLYGRVGKISEA 546
           P+  T  ++L ACS AG  + G +I   M   +      D Y    +VD+Y +   + +A
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGRQIHGFMIKANA---DSDDYIGVGLVDMYAKNHFLDDA 357

Query: 547 EDLIHTMPMKPDSVIWSSLLGSCRKHG 573
             +   M    D ++ ++L+  C  HG
Sbjct: 358 RKVFDWM-FHRDLILCNALISGC-SHG 382


>gb|AAP54374.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
           gi|37535570|ref|NP_922087.1| hypothetical protein [Oryza
           sativa (japonica cultivar-group)]
           gi|16905194|gb|AAL31064.1| hypothetical protein [Oryza
           sativa]
          Length = 698

 Score =  430 bits (1106), Expect = e-119
 Identities = 246/700 (35%), Positives = 389/700 (55%), Gaps = 35/700 (5%)

Query: 77  ASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQM 136
           ASL  +C +   L++G  LH  ++       +  FL NHL+ MYS C  L  A  +F  M
Sbjct: 24  ASLLQSCGRAGDLRRGRLLHARLVLSGAAAAST-FLANHLITMYSHCADLASALRLFAAM 82

Query: 137 PRRNIVSWTALISGYAQCGLIRECFYLFSGLL-AHYRPNEFAFASLLSACEEHDIKC-GM 194
           PRRN VSWT L+SG +Q  +  +    F+ +  A   P  FA +S   A         G 
Sbjct: 83  PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGA 142

Query: 195 QVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWNS 254
           Q+H V +++  D  ++VA+ L  MYSKC             +A  +F  M  ++ ++W +
Sbjct: 143 QLHCVGVRLGFDTELFVASNLADMYSKCG---------LLSEACRVFDQMPQKDAVAWTA 193

Query: 255 MIAGFQFRGLGDKAIRLFAHMYCSG-IGFDRATLLSVFSSLNECSAFDELNIPLRNCFV- 312
           MI G+   G  + A+  F  M   G +G D+    SV S+             L++ ++ 
Sbjct: 194 MIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGG----------LKDGWLS 243

Query: 313 --LHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITVLA 370
             +HC  TK G   EV V  AL+  YA     +    R+     G  ++VS T++I    
Sbjct: 244 KSIHCCVTKAGFELEVAVRNALIDMYAK-SMDVESASRVLKIDPGGWNVVSGTSMIDGYI 302

Query: 371 DQD-PEQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTV 429
           + D  E+A +++ +L R+   P+  TFS  +K CA     +Q   +H+QVIK    +D+ 
Sbjct: 303 ETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSF 362

Query: 430 LSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELFKKL---D 486
           + + L+  Y + G ++LS Q+F+E+     ++WN+++  +A HG  ++A++ F ++    
Sbjct: 363 VGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSG 422

Query: 487 VHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISEA 546
           + P+   FV+LL+ACSHAGLV+EG++ F SM + HGI P+ +HY+C++D YGR G++ EA
Sbjct: 423 IRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEA 482

Query: 547 EDLIHTMPMKPDSVIWSSLLGSCRKHGETRLARIAAEKFKELDPKNSLGYVQMSNIYSSE 606
              I  MP+KP++  W SLLG+CR  G   L  +AA+   +L+P N+  +V +S IY+S 
Sbjct: 483 YKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASL 542

Query: 607 GSFIEAGLIRKEMRDSRVKKQPGLSWVEVGKQVHEFTSGGHHHPHKEAIQSRLEILIGQL 666
           G + +   +RK MRDSR+KK PG SWV+  K+ H F S    HP ++ I  +LE L  ++
Sbjct: 543 GQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRI 602

Query: 667 KEMGYVPEITLALYDTEVEHKEDQLFHHSEKMALVFAIMNEGNLPCGGNVIKIMKNIRIC 726
           KE GY+P+ +    + E   KE  L +HSE++A+ FA++   ++P    +I + KN+RIC
Sbjct: 603 KEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALI---SMPATKPII-VKKNLRIC 658

Query: 727 ADCHNFMKLASNLFQKEIVVRDSNRFHHFKNATCSCNDYW 766
            DCH   K    + +++I+VRD++RFHHF N  CSC DYW
Sbjct: 659 IDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 698



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 19/229 (8%)

Query: 75  TYASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFD 134
           T++S+   CA    L+QG  LH  ++  D  +  D F+ + LV+MY KCG +  +  +F+
Sbjct: 328 TFSSMIKGCAMQALLEQGAQLHAQVIKTD--LIRDSFVGSTLVDMYGKCGLISLSMQLFN 385

Query: 135 QMPRRNIVSWTALISGYAQCGLIRECFYLFSGLL-AHYRPNEFAFASLLSACEEHDIKCG 193
           ++  R  ++W A+I+ +AQ G  RE    F  ++ +  RPN  AF SLL+AC    +   
Sbjct: 386 EIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDE 445

Query: 194 MQVHAVALKIS--LDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFR-NLI 250
              +  ++K +  ++      + +I  Y +             D+A+     M  + N  
Sbjct: 446 GLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAG---------RLDEAYKFISEMPIKPNAY 496

Query: 251 SWNSMIAGFQFRG---LGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNE 296
            W S++   + RG   LG+ A +    +     G    +L  +++SL +
Sbjct: 497 GWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGI-HVSLSGIYASLGQ 544


>gb|AAL73981.1| putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  424 bits (1089), Expect = e-117
 Identities = 251/738 (34%), Positives = 391/738 (52%), Gaps = 36/738 (4%)

Query: 39  DAQIRALSLQGNLEEALSLLYTHDKHILTHSSLSLQTYASLFHACAKNKCLQQGMALHNY 98
           +A IRA S +G    A+ L   +   +      +  T+  +  AC+    L  G  +H +
Sbjct: 68  NALIRAYSWRGPFHAAIDL---YRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAH 124

Query: 99  ILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQMPRRNIVSWTALISGYAQCGLIR 158
                  +  DLF++  L+++Y +C     A  VF +MP R++V+W A+++GYA  G+  
Sbjct: 125 AAAVG--LHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYH 182

Query: 159 ECFYLFSGLLAH--YRPNEFAFASLLSACEEHD-IKCGMQVHAVALKISLDAS---VYVA 212
                   +      RPN     SLL    +H  +  G  VHA  L+  LD +   V + 
Sbjct: 183 HAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIG 242

Query: 213 NALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWNSMIAGFQFRGLGDKAIRLF 272
            AL+ MY+KC    H  Y      A  +F  M  RN ++W+++I GF       +A  LF
Sbjct: 243 TALLDMYAKCK---HLVY------ACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLF 293

Query: 273 AHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRNCFVLHCLATKTGLISEVEVVTAL 332
             M   G+ F  AT  SV S+L  C++  +L +  +    LH L  K+G+ +++    +L
Sbjct: 294 KDMLVEGMCFLSAT--SVASALRVCASLADLRMGTQ----LHALLAKSGIHADLTAGNSL 347

Query: 333 VKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIIT-VLADQDPEQAFLLFCQLHRENFVP 391
           +  YA   G I++   LF D    +D +S+ A+++  + +   E+AFL+F ++   N  P
Sbjct: 348 LSMYAK-AGLINEATMLF-DEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQP 405

Query: 392 DWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVF 451
           D  T    + AC++    Q     H  VI RG   +T + N+LI  YA+ G + LS QVF
Sbjct: 406 DIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVF 465

Query: 452 DEMCCHDLVSWNSMLKSYALHGKAKDALELF---KKLDVHPDSTTFVALLSACSHAGLVE 508
           D+M   D+VSWN+M+  Y +HG  K+A  LF   K     PD  TF+ L++ACSH+GLV 
Sbjct: 466 DKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVT 525

Query: 509 EGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGS 568
           EG   F++M+  +GI+P+++HY CMVDL  R G + EA   I +MP+K D  +W +LLG+
Sbjct: 526 EGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGA 585

Query: 569 CRKHGETRLARIAAEKFKELDPKNSLGYVQMSNIYSSEGSFIEAGLIRKEMRDSRVKKQP 628
           CR H    L +  +   ++L P+ +  +V +SNI+S+ G F EA  +R   +    KK P
Sbjct: 586 CRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSP 645

Query: 629 GLSWVEVGKQVHEFTSGGHHHPHKEAIQSRLEILIGQLKEMGYVPEITLALYDTEVEHKE 688
           G SW+E+   +H F  G   HP    I   L+ ++  +K++GY  + +  L D E E KE
Sbjct: 646 GCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFVLQDLEEEEKE 705

Query: 689 DQLFHHSEKMALVFAIMNEGNLPCGGNVIKIMKNIRICADCHNFMKLASNLFQKEIVVRD 748
             L +HSEK+A+ F +++          I + KN+R+C DCH  +K  + +  + I+VRD
Sbjct: 706 KALLYHSEKLAIAFGVLSLNE----DKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRD 761

Query: 749 SNRFHHFKNATCSCNDYW 766
           +NRFHHFKN  CSC D+W
Sbjct: 762 ANRFHHFKNGQCSCGDFW 779



 Score =  162 bits (409), Expect = 5e-38
 Identities = 128/460 (27%), Positives = 226/460 (48%), Gaps = 29/460 (6%)

Query: 124 GHLEYARYVFDQMPRRNIVSWTALISGYAQCGLIRECFYLFSGLLAHYR--PNEFAFASL 181
           G L  AR VFD++P  +  ++ ALI  Y+  G       L+  +L ++R  PN++ F  +
Sbjct: 47  GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSML-YFRVPPNKYTFPFV 105

Query: 182 LSACEE-HDIKCGMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTM 240
           L AC    D+  G  +HA A  + L   ++V+ ALI +Y +C+      + P    A  +
Sbjct: 106 LKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCA-----RFGP----AANV 156

Query: 241 FKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMY-CSGIGFDRATLLSVFSSLNECSA 299
           F  M  R++++WN+M+AG+   G+   AI     M    G+  + +TL+S+   L +  A
Sbjct: 157 FAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGA 216

Query: 300 FDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDI 359
             +       C   +    +     +V + TAL+  YA     +  C R+F   + + + 
Sbjct: 217 LFQGTSVHAYCLRAYLDQNE----EQVLIGTALLDMYAKCKHLVYAC-RVFHGMTVRNE- 270

Query: 360 VSWTAII--TVLADQDPEQAFLLFCQLHRENF-VPDWHTFSIALKACAYFVTEQQALAVH 416
           V+W+A+I   VL D+  E AF LF  +  E        + + AL+ CA     +    +H
Sbjct: 271 VTWSALIGGFVLCDRMTE-AFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLH 329

Query: 417 SQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAK 476
           + + K G   D    N+L+  YA++G +  +  +FDE+   D +S+ ++L  Y  +GKA+
Sbjct: 330 ALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAE 389

Query: 477 DALELFKKL---DVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACM 533
           +A  +FKK+   +V PD  T V+L+ ACSH   ++ G     S+    G+  +      +
Sbjct: 390 EAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVI-IRGLALETSICNSL 448

Query: 534 VDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHG 573
           +D+Y + G+I  +  +   MP + D V W++++     HG
Sbjct: 449 IDMYAKCGRIDLSRQVFDKMPAR-DIVSWNTMIAGYGIHG 487


>ref|NP_914402.1| P0020E09.15 [Oryza sativa (japonica cultivar-group)]
          Length = 813

 Score =  422 bits (1084), Expect = e-116
 Identities = 247/710 (34%), Positives = 378/710 (52%), Gaps = 41/710 (5%)

Query: 75  TYASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFD 134
           T+     AC+       G A+H + +H    +Q DLF++  L++MY KC  L  A ++F 
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAG--LQADLFVSTALLDMYVKCACLPDAAHIFA 184

Query: 135 QMPRRNIVSWTALISGYAQCGLIRECF-YLFSGLLAHYR--PNEFAFASLLSA-CEEHDI 190
            MP R++V+W A+++GYA  G+      +L S  +  +R  PN     +LL    ++  +
Sbjct: 185 TMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGAL 244

Query: 191 KCGMQVHAVAL----------KISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTM 240
             G  VHA  +          K  L   V +  AL+ MY+KC    +         A  +
Sbjct: 245 AQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLY---------ARRV 295

Query: 241 FKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAF 300
           F +M  RN ++W+++I GF       +A  LF  M   G+ F   T  S+ S+L  C++ 
Sbjct: 296 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASL 353

Query: 301 DELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIV 360
           D L +  +    LH L  K+G+ +++    +L+  YA   G I     LF D    +D V
Sbjct: 354 DHLRMGEQ----LHALLAKSGVHADLTAGNSLLSMYAK-AGLIDQAIALF-DEMAVKDTV 407

Query: 361 SWTAIIT-VLADQDPEQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQV 419
           S++A+++  + +   E+AFL+F ++   N  PD  T    + AC++    Q     H  V
Sbjct: 408 SYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV 467

Query: 420 IKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDAL 479
           I RG   +T + NALI  YA+ G + LS QVF+ M   D+VSWN+M+  Y +HG  K+A 
Sbjct: 468 IIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEAT 527

Query: 480 ELF---KKLDVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDL 536
            LF     L   PD  TF+ LLSACSH+GLV EG   F+ M   +G+ P+++HY CMVDL
Sbjct: 528 ALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDL 587

Query: 537 YGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGETRLARIAAEKFKELDPKNSLGY 596
             R G + EA + I +MP++ D  +W +LLG+CR +    L +  +   +EL P+ +  +
Sbjct: 588 LSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNF 647

Query: 597 VQMSNIYSSEGSFIEAGLIRKEMRDSRVKKQPGLSWVEVGKQVHEFTSGGHHHPHKEAIQ 656
           V +SNIYS+ G F EA  +R   +    KK PG SW+E+   +H F  G   HP    I 
Sbjct: 648 VLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIY 707

Query: 657 SRLEILIGQLKEMGYVPEITLALYDTEVEHKEDQLFHHSEKMALVFAIMNEGNLPCGGNV 716
             L+ ++  +K++GY P+ +  L D E E KE  L  HSEK+A+ + I++          
Sbjct: 708 RELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSE----DKT 763

Query: 717 IKIMKNIRICADCHNFMKLASNLFQKEIVVRDSNRFHHFKNATCSCNDYW 766
           I + KN+R+C DCH  +K  S + ++ I+VRD+NRFHHFKN  CSC D+W
Sbjct: 764 IFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813



 Score =  174 bits (441), Expect = 1e-41
 Identities = 141/508 (27%), Positives = 248/508 (48%), Gaps = 38/508 (7%)

Query: 124 GHLEYARYVFDQMPRRNIVSWTALISGYAQCG--LIRECFYLFSGLLAH-YRPNEFAFAS 180
           GHL  A ++FDQ+P  ++ ++  LI  Y+        +  +L+  +L H   PN + F  
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 181 LLSACEE-HDIKCGMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWT 239
            L AC    D  CG  +H  A+   L A ++V+ AL+ MY KC+            DA  
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCA---------CLPDAAH 181

Query: 240 MFKSMEFRNLISWNSMIAGFQFRGLGDKAIR--LFAHMYCSGIGFDRATLLSVFSSLNEC 297
           +F +M  R+L++WN+M+AG+   G+   A+   L   M    +  + +TL+++   L + 
Sbjct: 182 IFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQ 241

Query: 298 SAFDELNIPLRNCFVLHCL----ATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDT 353
            A  +       C +  CL     +K+ L   V + TAL+  YA  G  +    R   D 
Sbjct: 242 GALAQGTSVHAYC-IRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLL--YARRVFDA 298

Query: 354 SGKQDIVSWTAII--TVLADQDPEQAFLLF-CQLHRENFVPDWHTFSIALKACAYFVTEQ 410
              ++ V+W+A+I   VL  +   QAFLLF   L +        + + AL+ACA     +
Sbjct: 299 MPARNEVTWSALIGGFVLCSR-MTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLR 357

Query: 411 QALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYA 470
               +H+ + K G   D    N+L+  YA++G +  +  +FDEM   D VS+++++  Y 
Sbjct: 358 MGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYV 417

Query: 471 LHGKAKDALELFKKL---DVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQL 527
            +G+A++A  +FKK+   +V PD+ T V+L+ ACSH   ++ G     S+    G+  + 
Sbjct: 418 QNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGLASET 476

Query: 528 DHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGETRLARIAAEKFKE 587
                ++D+Y + G+I  +  + + MP + D V W++++     HG   L + A   F E
Sbjct: 477 SICNALIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHG---LGKEATALFLE 532

Query: 588 LD----PKNSLGYVQMSNIYSSEGSFIE 611
           ++    P + + ++ + +  S  G  IE
Sbjct: 533 MNNLGFPPDGVTFICLLSACSHSGLVIE 560



 Score =  115 bits (287), Expect = 7e-24
 Identities = 87/298 (29%), Positives = 137/298 (45%), Gaps = 20/298 (6%)

Query: 71  LSLQTYASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYAR 130
           LS  + AS   ACA    L+ G  LH  +      +  DL   N L++MY+K G ++ A 
Sbjct: 338 LSPTSIASALRACASLDHLRMGEQLHALLAKSG--VHADLTAGNSLLSMYAKAGLIDQAI 395

Query: 131 YVFDQMPRRNIVSWTALISGYAQCGLIRECFYLFSGLLA-HYRPNEFAFASLLSACEE-H 188
            +FD+M  ++ VS++AL+SGY Q G   E F +F  + A +  P+     SL+ AC    
Sbjct: 396 ALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLA 455

Query: 189 DIKCGMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRN 248
            ++ G   H   +   L +   + NALI MY+KC            D +  +F  M  R+
Sbjct: 456 ALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG---------RIDLSRQVFNMMPSRD 506

Query: 249 LISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLR 308
           ++SWN+MIAG+   GLG +A  LF  M   G   D  T + + S+   CS      + + 
Sbjct: 507 IVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSA---CS---HSGLVIE 560

Query: 309 NCFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAII 366
                H +    GL   +E    +V    + GG + + Y        + D+  W A++
Sbjct: 561 GKHWFHVMGHGYGLTPRMEHYICMV-DLLSRGGFLDEAYEFIQSMPLRADVRVWVALL 617


>dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa (japonica
           cultivar-group)]
          Length = 698

 Score =  422 bits (1084), Expect = e-116
 Identities = 247/710 (34%), Positives = 378/710 (52%), Gaps = 41/710 (5%)

Query: 75  TYASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFD 134
           T+     AC+       G A+H + +H    +Q DLF++  L++MY KC  L  A ++F 
Sbjct: 12  TFPFALKACSALADHHCGRAIHRHAIHAG--LQADLFVSTALLDMYVKCACLPDAAHIFA 69

Query: 135 QMPRRNIVSWTALISGYAQCGLIRECF-YLFSGLLAHYR--PNEFAFASLLSA-CEEHDI 190
            MP R++V+W A+++GYA  G+      +L S  +  +R  PN     +LL    ++  +
Sbjct: 70  TMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGAL 129

Query: 191 KCGMQVHAVAL----------KISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTM 240
             G  VHA  +          K  L   V +  AL+ MY+KC    +         A  +
Sbjct: 130 AQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLY---------ARRV 180

Query: 241 FKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAF 300
           F +M  RN ++W+++I GF       +A  LF  M   G+ F   T  S+ S+L  C++ 
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASL 238

Query: 301 DELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIV 360
           D L +  +    LH L  K+G+ +++    +L+  YA   G I     LF D    +D V
Sbjct: 239 DHLRMGEQ----LHALLAKSGVHADLTAGNSLLSMYAK-AGLIDQAIALF-DEMAVKDTV 292

Query: 361 SWTAIIT-VLADQDPEQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQV 419
           S++A+++  + +   E+AFL+F ++   N  PD  T    + AC++    Q     H  V
Sbjct: 293 SYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV 352

Query: 420 IKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDAL 479
           I RG   +T + NALI  YA+ G + LS QVF+ M   D+VSWN+M+  Y +HG  K+A 
Sbjct: 353 IIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEAT 412

Query: 480 ELF---KKLDVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDL 536
            LF     L   PD  TF+ LLSACSH+GLV EG   F+ M   +G+ P+++HY CMVDL
Sbjct: 413 ALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDL 472

Query: 537 YGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGETRLARIAAEKFKELDPKNSLGY 596
             R G + EA + I +MP++ D  +W +LLG+CR +    L +  +   +EL P+ +  +
Sbjct: 473 LSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNF 532

Query: 597 VQMSNIYSSEGSFIEAGLIRKEMRDSRVKKQPGLSWVEVGKQVHEFTSGGHHHPHKEAIQ 656
           V +SNIYS+ G F EA  +R   +    KK PG SW+E+   +H F  G   HP    I 
Sbjct: 533 VLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIY 592

Query: 657 SRLEILIGQLKEMGYVPEITLALYDTEVEHKEDQLFHHSEKMALVFAIMNEGNLPCGGNV 716
             L+ ++  +K++GY P+ +  L D E E KE  L  HSEK+A+ + I++          
Sbjct: 593 RELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSE----DKT 648

Query: 717 IKIMKNIRICADCHNFMKLASNLFQKEIVVRDSNRFHHFKNATCSCNDYW 766
           I + KN+R+C DCH  +K  S + ++ I+VRD+NRFHHFKN  CSC D+W
Sbjct: 649 IFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698



 Score =  115 bits (287), Expect = 7e-24
 Identities = 87/298 (29%), Positives = 137/298 (45%), Gaps = 20/298 (6%)

Query: 71  LSLQTYASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYAR 130
           LS  + AS   ACA    L+ G  LH  +      +  DL   N L++MY+K G ++ A 
Sbjct: 223 LSPTSIASALRACASLDHLRMGEQLHALLAKSG--VHADLTAGNSLLSMYAKAGLIDQAI 280

Query: 131 YVFDQMPRRNIVSWTALISGYAQCGLIRECFYLFSGLLA-HYRPNEFAFASLLSACEE-H 188
            +FD+M  ++ VS++AL+SGY Q G   E F +F  + A +  P+     SL+ AC    
Sbjct: 281 ALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLA 340

Query: 189 DIKCGMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRN 248
            ++ G   H   +   L +   + NALI MY+KC            D +  +F  M  R+
Sbjct: 341 ALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG---------RIDLSRQVFNMMPSRD 391

Query: 249 LISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLR 308
           ++SWN+MIAG+   GLG +A  LF  M   G   D  T + + S+   CS      + + 
Sbjct: 392 IVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSA---CS---HSGLVIE 445

Query: 309 NCFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAII 366
                H +    GL   +E    +V    + GG + + Y        + D+  W A++
Sbjct: 446 GKHWFHVMGHGYGLTPRMEHYICMV-DLLSRGGFLDEAYEFIQSMPLRADVRVWVALL 502



 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 15/196 (7%)

Query: 386 RENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLA 445
           R    P+ +TF  ALKAC+         A+H   I  G Q D  +S AL+  Y +   L 
Sbjct: 3   RHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLP 62

Query: 446 LSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALE--LFKKLDVH---PDSTTFVALLSA 500
            +  +F  M   DLV+WN+ML  YA HG    A+   L  ++ +H   P+++T VALL  
Sbjct: 63  DAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPL 122

Query: 501 CSHAGLVEEGVEIF-----NSMSDNHGIVPQLDH----YACMVDLYGRVGKISEAEDLIH 551
            +  G + +G  +        +  N     +L         ++D+Y + G +  A  +  
Sbjct: 123 LAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFD 182

Query: 552 TMPMKPDSVIWSSLLG 567
            MP + + V WS+L+G
Sbjct: 183 AMPAR-NEVTWSALIG 197


>emb|CAB79788.1| putative protein [Arabidopsis thaliana] gi|5725434|emb|CAB52443.1|
           putative protein [Arabidopsis thaliana]
           gi|15234831|ref|NP_194799.1| pentatricopeptide (PPR)
           repeat-containing protein [Arabidopsis thaliana]
           gi|25345452|pir||C85359 hypothetical protein AT4g30700
           [imported] - Arabidopsis thaliana
          Length = 792

 Score =  418 bits (1075), Expect = e-115
 Identities = 243/699 (34%), Positives = 378/699 (53%), Gaps = 34/699 (4%)

Query: 75  TYASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFD 134
           TYA    A +  +  + G  +H   +       ++L L +++V MY K   +E AR VFD
Sbjct: 121 TYAFAISAASGFRDDRAGRVIHGQAVVDG--CDSELLLGSNIVKMYFKFWRVEDARKVFD 178

Query: 135 QMPRRNIVSWTALISGYAQCGLIRECFYLFSGLLAHY--RPNEFAFASLLSACEE-HDIK 191
           +MP ++ + W  +ISGY +  +  E   +F  L+     R +      +L A  E  +++
Sbjct: 179 RMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELR 238

Query: 192 CGMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNLIS 251
            GMQ+H++A K    +  YV    I++YSKC     G           +F+     ++++
Sbjct: 239 LGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGS---------ALFREFRKPDIVA 289

Query: 252 WNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRNCF 311
           +N+MI G+   G  + ++ LF  +  SG     +TL+S+                L   +
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH----------LMLIY 339

Query: 312 VLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITVLAD 371
            +H    K+  +S   V TAL   Y+ L  +I    +LF D S ++ + SW A+I+    
Sbjct: 340 AIHGYCLKSNFLSHASVSTALTTVYSKLN-EIESARKLF-DESPEKSLPSWNAMISGYTQ 397

Query: 372 QD-PEQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTVL 430
               E A  LF ++ +  F P+  T +  L ACA          VH  V    F+    +
Sbjct: 398 NGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYV 457

Query: 431 SNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELFKKL---DV 487
           S ALI  YA+ GS+A + ++FD M   + V+WN+M+  Y LHG+ ++AL +F ++    +
Sbjct: 458 STALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGI 517

Query: 488 HPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISEAE 547
            P   TF+ +L ACSHAGLV+EG EIFNSM   +G  P + HYACMVD+ GR G +  A 
Sbjct: 518 TPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRAL 577

Query: 548 DLIHTMPMKPDSVIWSSLLGSCRKHGETRLARIAAEKFKELDPKNSLGYVQMSNIYSSEG 607
             I  M ++P S +W +LLG+CR H +T LAR  +EK  ELDP N   +V +SNI+S++ 
Sbjct: 578 QFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADR 637

Query: 608 SFIEAGLIRKEMRDSRVKKQPGLSWVEVGKQVHEFTSGGHHHPHKEAIQSRLEILIGQLK 667
           ++ +A  +R+  +  ++ K PG + +E+G+  H FTSG   HP  + I  +LE L G+++
Sbjct: 638 NYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMR 697

Query: 668 EMGYVPEITLALYDTEVEHKEDQLFHHSEKMALVFAIMNEGNLPCGGNVIKIMKNIRICA 727
           E GY PE  LAL+D E E +E  +  HSE++A+ F ++        G  I+I+KN+R+C 
Sbjct: 698 EAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATE----PGTEIRIIKNLRVCL 753

Query: 728 DCHNFMKLASNLFQKEIVVRDSNRFHHFKNATCSCNDYW 766
           DCH   KL S + ++ IVVRD+NRFHHFK+  CSC DYW
Sbjct: 754 DCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792



 Score =  138 bits (347), Expect = 8e-31
 Identities = 133/526 (25%), Positives = 231/526 (43%), Gaps = 56/526 (10%)

Query: 67  THSSLSLQTYASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHL 126
           T + +S  TY   F        L Q  A    ILH     +ND+ L   L    S  G +
Sbjct: 14  TAALISKNTYLDFFKRSTSISHLAQTHA--QIILHG---FRNDISLLTKLTQRLSDLGAI 68

Query: 127 EYARYVFDQMPRRNIVSWTALISGYAQCGLIRECFYLFSGLLAHYR------PNEFAFAS 180
            YAR +F  + R ++  +  L+ G++    + E  +    + AH R      PN   +A 
Sbjct: 69  YYARDIFLSVQRPDVFLFNVLMRGFS----VNESPHSSLSVFAHLRKSTDLKPNSSTYAF 124

Query: 181 LLSACEE-HDIKCGMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWT 239
            +SA     D + G  +H  A+    D+ + + + ++ MY K             +DA  
Sbjct: 125 AISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFW---------RVEDARK 175

Query: 240 MFKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYC-SGIGFDRATLLSVFSSLNECS 298
           +F  M  ++ I WN+MI+G++   +  ++I++F  +   S    D  TLL +  ++ E  
Sbjct: 176 VFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAE-- 233

Query: 299 AFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQD 358
              EL + ++    +H LATKTG  S   V+T  +  Y+   G+I     LF +   K D
Sbjct: 234 -LQELRLGMQ----IHSLATKTGCYSHDYVLTGFISLYSKC-GKIKMGSALFREFR-KPD 286

Query: 359 IVSWTAII-TVLADQDPEQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHS 417
           IV++ A+I    ++ + E +  LF +L          T    +    + +      A+H 
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLML---IYAIHG 343

Query: 418 QVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKD 477
             +K  F     +S AL   Y++   +  + ++FDE     L SWN+M+  Y  +G  +D
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403

Query: 478 ALELFK---KLDVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYA--- 531
           A+ LF+   K +  P+  T   +LSAC+  G +  G  +       H +V   D  +   
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV-------HDLVRSTDFESSIY 456

Query: 532 ---CMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGE 574
               ++ +Y + G I+EA  L   M  K + V W++++     HG+
Sbjct: 457 VSTALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNTMISGYGLHGQ 501



 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 60/274 (21%), Positives = 128/274 (45%), Gaps = 13/274 (4%)

Query: 321 GLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITVLA-DQDPEQAFL 379
           G  +++ ++T L +  ++LG  I     +FL    + D+  +  ++   + ++ P  +  
Sbjct: 47  GFRNDISLLTKLTQRLSDLGA-IYYARDIFLSVQ-RPDVFLFNVLMRGFSVNESPHSSLS 104

Query: 380 LFCQLHRE-NFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAY 438
           +F  L +  +  P+  T++ A+ A + F  ++    +H Q +  G   + +L + ++  Y
Sbjct: 105 VFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMY 164

Query: 439 ARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELFKKL----DVHPDSTTF 494
            +   +  + +VFD M   D + WN+M+  Y  +    +++++F+ L        D+TT 
Sbjct: 165 FKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTL 224

Query: 495 VALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDLIHTMP 554
           + +L A +    +  G++I +S++   G           + LY + GKI     L     
Sbjct: 225 LDILPAVAELQELRLGMQI-HSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF- 282

Query: 555 MKPDSVIWSSLLGSCRKHGETRLARIAAEKFKEL 588
            KPD V +++++     +GET L   +   FKEL
Sbjct: 283 RKPDIVAYNAMIHGYTSNGETEL---SLSLFKEL 313


>dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
           gi|15242550|ref|NP_196557.1| pentatricopeptide (PPR)
           repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  417 bits (1071), Expect = e-115
 Identities = 249/704 (35%), Positives = 404/704 (57%), Gaps = 47/704 (6%)

Query: 81  HACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQMPRRN 140
           ++ A+   L++G  +H +++     +   + + N LVNMY+KCG +  AR VF  M  ++
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTG-LVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379

Query: 141 IVSWTALISGYAQCGLIRECFYLFSGLLAH-YRPNEFAFASLLSACEEHD-IKCGMQVHA 198
            VSW ++I+G  Q G   E    +  +  H   P  F   S LS+C      K G Q+H 
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHG 439

Query: 199 VALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWNSMIAG 258
            +LK+ +D +V V+NAL+T+Y++       GY    ++   +F SM   + +SWNS+I  
Sbjct: 440 ESLKLGIDLNVSVSNALMTLYAET------GYL---NECRKIFSSMPEHDQVSWNSIIGA 490

Query: 259 F--QFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRNCFVLHCL 316
                R L + A+  F +   +G   +R T  SV S+++  S F EL   +      H L
Sbjct: 491 LARSERSLPE-AVVCFLNAQRAGQKLNRITFSSVLSAVSSLS-FGELGKQI------HGL 542

Query: 317 ATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIIT------VLA 370
           A K  +  E     AL+  Y   G ++  C ++F   + ++D V+W ++I+      +LA
Sbjct: 543 ALKNNIADEATTENALIACYGKCG-EMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLA 601

Query: 371 DQDPEQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTVL 430
                  F+L      ++F+     ++  L A A   T ++ + VH+  ++   + D V+
Sbjct: 602 KALDLVWFMLQTGQRLDSFM-----YATVLSAFASVATLERGMEVHACSVRACLESDVVV 656

Query: 431 SNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELFK--KLD-- 486
            +AL+  Y++ G L  + + F+ M   +  SWNSM+  YA HG+ ++AL+LF+  KLD  
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQ 716

Query: 487 VHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISEA 546
             PD  TFV +LSACSHAGL+EEG + F SMSD++G+ P+++H++CM D+ GR G++ + 
Sbjct: 717 TPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKL 776

Query: 547 EDLIHTMPMKPDSVIWSSLLGS-CRKHG-ETRLARIAAEKFKELDPKNSLGYVQMSNIYS 604
           ED I  MPMKP+ +IW ++LG+ CR +G +  L + AAE   +L+P+N++ YV + N+Y+
Sbjct: 777 EDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYA 836

Query: 605 SEGSFIEAGLIRKEMRDSRVKKQPGLSWVEVGKQVHEFTSGGHHHPHKEAIQSRLEILIG 664
           + G + +    RK+M+D+ VKK+ G SWV +   VH F +G   HP  + I  +L+ L  
Sbjct: 837 AGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNR 896

Query: 665 QLKEMGYVPEITLALYDTEVEHKEDQLFHHSEKMALVF--AIMNEGNLPCGGNVIKIMKN 722
           ++++ GYVP+   ALYD E E+KE+ L +HSEK+A+ F  A      LP     I+IMKN
Sbjct: 897 KMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLP-----IRIMKN 951

Query: 723 IRICADCHNFMKLASNLFQKEIVVRDSNRFHHFKNATCSCNDYW 766
           +R+C DCH+  K  S +  ++I++RDSNRFHHF++  CSC+D+W
Sbjct: 952 LRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995



 Score =  180 bits (456), Expect = 2e-43
 Identities = 151/547 (27%), Positives = 253/547 (45%), Gaps = 50/547 (9%)

Query: 106 IQNDLFLTNHLVNMYSKCGHLEYARYVFDQMPRRNIVSWTALISGYAQCGLIRECFYLFS 165
           +  D++L N+L+N Y + G    AR VFD+MP RN VSW  ++SGY++ G  +E      
Sbjct: 32  LDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLR 91

Query: 166 GLLAH-YRPNEFAFASLLSACEE---HDIKCGMQVHAVALKISLDASVYVANALITMYSK 221
            ++      N++AF S+L AC+E     I  G Q+H +  K+S      V+N LI+MY K
Sbjct: 92  DMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWK 151

Query: 222 CSGGFHGGYDPTGDDAWTMFKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIG 281
           C G    GY      A   F  +E +N +SWNS+I+ +   G    A R+F+ M   G  
Sbjct: 152 CIGSV--GY------ALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG-- 201

Query: 282 FDRATLLSVFSSLNECSAFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANLGG 341
             R T  +  S +    +  E ++ L     + C   K+GL++++ V + LV ++A   G
Sbjct: 202 -SRPTEYTFGSLVTTACSLTEPDVRLLE--QIMCTIQKSGLLTDLFVGSGLVSAFAK-SG 257

Query: 342 QISDCYRLFLDTSGKQDIVSWTAIITVLADQDPEQAFLLFCQLHRENFVPDWHTFSIALK 401
            +S   ++F     +  +     ++ ++  +  E+A  LF  ++    V       +   
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSS 317

Query: 402 ACAYFVTEQQAL----AVHSQVIKRGFQKDTV-LSNALIHAYARSGSLALSEQVFDEMCC 456
              Y + E+  L     VH  VI  G     V + N L++ YA+ GS+A + +VF  M  
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377

Query: 457 HDLVSWNSMLKSYALHGKAKDALELFKKL---DVHPDSTTFVALLSACSHAGLVEEGVEI 513
            D VSWNSM+     +G   +A+E +K +   D+ P S T ++ LS+C+     + G +I
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI 437

Query: 514 FNSMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHG 573
            +  S   GI   +     ++ LY   G ++E   +  +MP + D V W+S++G+  +  
Sbjct: 438 -HGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGALAR-S 494

Query: 574 ETRLARIAAEKFKELDPKNSLGYVQMSNIYSSEGSFIEAGLIRKEMRDSRVKKQPGLSWV 633
           E  L                L  +  S++ S+  S                     LS+ 
Sbjct: 495 ERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSS---------------------LSFG 533

Query: 634 EVGKQVH 640
           E+GKQ+H
Sbjct: 534 ELGKQIH 540



 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 48/173 (27%), Positives = 86/173 (48%), Gaps = 16/173 (9%)

Query: 416 HSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKA 475
           HS++ K    KD  L N LI+AY  +G    + +VFDEM   + VSW  ++  Y+ +G+ 
Sbjct: 24  HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83

Query: 476 KDALELFK---KLDVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYA- 531
           K+AL   +   K  +  +   FV++L AC   G V  G+     +   HG++ +L +   
Sbjct: 84  KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV--GILFGRQI---HGLMFKLSYAVD 138

Query: 532 -----CMVDLYGR-VGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGETRLA 578
                 ++ +Y + +G +  A      + +K +SV W+S++    + G+ R A
Sbjct: 139 AVVSNVLISMYWKCIGSVGYALCAFGDIEVK-NSVSWNSIISVYSQAGDQRSA 190


>gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
           gi|15226200|ref|NP_180329.1| pentatricopeptide (PPR)
           repeat-containing protein [Arabidopsis thaliana]
           gi|25354625|pir||G84674 probable selenium-binding
           protein [imported] - Arabidopsis thaliana
          Length = 868

 Score =  416 bits (1068), Expect = e-114
 Identities = 242/701 (34%), Positives = 386/701 (54%), Gaps = 37/701 (5%)

Query: 75  TYASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFD 134
           T+A+     A+     +G+ +H  ++     +   + ++N L+N+Y KCG++  AR +FD
Sbjct: 196 TFAAALGVLAEEGVGGRGLQVHTVVVKNG--LDKTIPVSNSLINLYLKCGNVRKARILFD 253

Query: 135 QMPRRNIVSWTALISGYAQCGLIRECFYLFSGLLAHY-RPNEFAFASLLSACEE-HDIKC 192
           +   +++V+W ++ISGYA  GL  E   +F  +  +Y R +E +FAS++  C    +++ 
Sbjct: 254 KTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRF 313

Query: 193 GMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSME-FRNLIS 251
             Q+H   +K        +  AL+  YSKC+            DA  +FK +    N++S
Sbjct: 314 TEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAML---------DALRLFKEIGCVGNVVS 364

Query: 252 WNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRNCF 311
           W +MI+GF      ++A+ LF+ M   G+  +  T   + ++L           P+ +  
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL-----------PVISPS 413

Query: 312 VLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITVLAD 371
            +H    KT       V TAL+ +Y  LG ++ +  ++F     K DIV+W+A++   A 
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLG-KVEEAAKVFSGIDDK-DIVAWSAMLAGYAQ 471

Query: 372 Q-DPEQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQ-QALAVHSQVIKRGFQKDTV 429
             + E A  +F +L +    P+  TFS  L  CA       Q    H   IK        
Sbjct: 472 TGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLC 531

Query: 430 LSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELFKKLD--- 486
           +S+AL+  YA+ G++  +E+VF      DLVSWNSM+  YA HG+A  AL++FK++    
Sbjct: 532 VSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 591

Query: 487 VHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISEA 546
           V  D  TF+ + +AC+HAGLVEEG + F+ M  +  I P  +H +CMVDLY R G++ +A
Sbjct: 592 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 651

Query: 547 EDLIHTMPMKPDSVIWSSLLGSCRKHGETRLARIAAEKFKELDPKNSLGYVQMSNIYSSE 606
             +I  MP    S IW ++L +CR H +T L R+AAEK   + P++S  YV +SN+Y+  
Sbjct: 652 MKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAES 711

Query: 607 GSFIEAGLIRKEMRDSRVKKQPGLSWVEVGKQVHEFTSGGHHHPHKEAIQSRLEILIGQL 666
           G + E   +RK M +  VKK+PG SW+EV  + + F +G   HP K+ I  +LE L  +L
Sbjct: 712 GDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRL 771

Query: 667 KEMGYVPEITLALYDTEVEHKEDQLFHHSEKMALVFAIMNEGNLPCGGNVIKIMKNIRIC 726
           K++GY P+ +  L D + EHKE  L  HSE++A+ F ++        G+ + I+KN+R+C
Sbjct: 772 KDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPK----GSPLLIIKNLRVC 827

Query: 727 ADCHNFMKLASNLFQKEIVVRDSNRFHHF-KNATCSCNDYW 766
            DCH  +KL + + ++EIVVRDSNRFHHF  +  CSC D+W
Sbjct: 828 GDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868



 Score =  211 bits (537), Expect = 7e-53
 Identities = 143/487 (29%), Positives = 250/487 (50%), Gaps = 31/487 (6%)

Query: 108 NDLFLTNHLVNMYSKCGHLEYARYVFDQMPRRNIVSWTALISGYAQCGLIRECFYLFSGL 167
           +D+ +   LV+ Y K  + +  R VFD+M  RN+V+WT LISGYA+  +  E   LF  +
Sbjct: 126 DDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRM 185

Query: 168 LAH-YRPNEFAFASLLSACEEHDI-KCGMQVHAVALKISLDASVYVANALITMYSKCSGG 225
                +PN F FA+ L    E  +   G+QVH V +K  LD ++ V+N+LI +Y KC   
Sbjct: 186 QNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCG-- 243

Query: 226 FHGGYDPTGDDAWTMFKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRA 285
                      A  +F   E +++++WNSMI+G+   GL  +A+ +F   Y   + + R 
Sbjct: 244 -------NVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF---YSMRLNYVRL 293

Query: 286 TLLSVFSSLNECSAFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANLGGQISD 345
           +  S  S +  C+   EL    +    LHC   K G + +  + TAL+ +Y+     + D
Sbjct: 294 SESSFASVIKLCANLKELRFTEQ----LHCSVVKYGFLFDQNIRTALMVAYSKCTAML-D 348

Query: 346 CYRLFLDTSGKQDIVSWTAIIT-VLADQDPEQAFLLFCQLHRENFVPDWHTFSIALKACA 404
             RLF +     ++VSWTA+I+  L +   E+A  LF ++ R+   P+  T+S+ L A  
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408

Query: 405 YFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNS 464
                +    VH+QV+K  +++ + +  AL+ AY + G +  + +VF  +   D+V+W++
Sbjct: 409 VISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464

Query: 465 MLKSYALHGKAKDALELFKKL---DVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNH 521
           ML  YA  G+ + A+++F +L    + P+  TF ++L+ C+         + F+  +   
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 524

Query: 522 GIVPQLDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGETRLARIA 581
            +   L   + ++ +Y + G I  AE++      K D V W+S++    +HG+   A  A
Sbjct: 525 RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQHGQ---AMKA 580

Query: 582 AEKFKEL 588
            + FKE+
Sbjct: 581 LDVFKEM 587



 Score =  120 bits (300), Expect = 2e-25
 Identities = 113/462 (24%), Positives = 205/462 (43%), Gaps = 41/462 (8%)

Query: 129 ARYVFDQMPRRNIVSWTALISGYAQCGLIRECFYLFSGLLAHYRPNEF---AFASLLSA- 184
           A  +FD+ P R+  S+ +L+ G+++ G  +E   LF  +  H    E     F+S+L   
Sbjct: 46  AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNI--HRLGMEMDCSIFSSVLKVS 103

Query: 185 ---CEEHDIKCGMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMF 241
              C+E     G Q+H   +K      V V  +L+  Y K S            D   +F
Sbjct: 104 ATLCDE---LFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGS---------NFKDGRKVF 151

Query: 242 KSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFD 301
             M+ RN+++W ++I+G+    + D+ + LF  M   G      T  + F+         
Sbjct: 152 DEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG------TQPNSFTFAAALGVLA 205

Query: 302 ELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVS 361
           E  +  R   V H +  K GL   + V  +L+  Y   G       R+  D +  + +V+
Sbjct: 206 EEGVGGRGLQV-HTVVVKNGLDKTIPVSNSLINLYLKCGNVRK--ARILFDKTEVKSVVT 262

Query: 362 WTAIITVLADQDPEQAFLLFCQLHRENFVP-DWHTFSIALKACAYFVTEQQALAVHSQVI 420
           W ++I+  A    +   L      R N+V     +F+  +K CA     +    +H  V+
Sbjct: 263 WNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVV 322

Query: 421 KRGFQKDTVLSNALIHAYARSGSLALSEQVFDEM-CCHDLVSWNSMLKSYALHGKAKDAL 479
           K GF  D  +  AL+ AY++  ++  + ++F E+ C  ++VSW +M+  +  +   ++A+
Sbjct: 323 KYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAV 382

Query: 480 ELF---KKLDVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDL 536
           +LF   K+  V P+  T+  +L+A       E   ++  +  +    V        ++D 
Sbjct: 383 DLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVG-----TALLDA 437

Query: 537 YGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGETRLA 578
           Y ++GK+ EA  +   +  K D V WS++L    + GET  A
Sbjct: 438 YVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAGYAQTGETEAA 478



 Score =  108 bits (269), Expect = 9e-22
 Identities = 81/274 (29%), Positives = 140/274 (50%), Gaps = 17/274 (6%)

Query: 236 DAWTMFKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLN 295
           +A  +F     R+  S+ S++ GF   G   +A RLF +++  G+  D     S+FSS+ 
Sbjct: 45  NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMD----CSIFSSVL 100

Query: 296 ECSAF--DELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDT 353
           + SA   DEL         LHC   K G + +V V T+LV +Y   G    D  ++F D 
Sbjct: 101 KVSATLCDELFGRQ-----LHCQCIKFGFLDDVSVGTSLVDTYMK-GSNFKDGRKVF-DE 153

Query: 354 SGKQDIVSWTAIITVLADQDP-EQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQA 412
             ++++V+WT +I+  A     ++   LF ++  E   P+  TF+ AL   A      + 
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213

Query: 413 LAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALH 472
           L VH+ V+K G  K   +SN+LI+ Y + G++  +  +FD+     +V+WNSM+  YA +
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273

Query: 473 GKAKDALELFKKLD---VHPDSTTFVALLSACSH 503
           G   +AL +F  +    V    ++F +++  C++
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307


>ref|NP_917461.1| P0415C01.16 [Oryza sativa (japonica cultivar-group)]
            gi|20146256|dbj|BAB89038.1| putative pentatricopeptide
            (PPR) repeat-containing protein [Oryza sativa (japonica
            cultivar-group)]
          Length = 1062

 Score =  410 bits (1055), Expect = e-113
 Identities = 236/716 (32%), Positives = 397/716 (54%), Gaps = 45/716 (6%)

Query: 69   SSLSLQTYASLFHACAKNKCLQQGMA----LHNYILHKDPTIQNDLFLTNHLVNMYSKCG 124
            +++++ TY  L  A A+    +QG+     +H ++L     I   + ++N LVNMY+KCG
Sbjct: 374  AAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGH-IYRKIAVSNGLVNMYAKCG 432

Query: 125  HLEYARYVFDQMPRRNIVSWTALIS-----GYAQCGLIRECFYLFSGLLAHYRPNEFAFA 179
             ++ A  VF  M  R+ +SW  +I+     GY +  ++  C    + +     P+ FA  
Sbjct: 433  AIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSI----GPSNFAAI 488

Query: 180  SLLSACEEHDI-KCGMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAW 238
            S LS+C    +   G Q+H  A+K  L     V+NAL+ MY +C             + W
Sbjct: 489  SGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECG---------RMSECW 539

Query: 239  TMFKSMEFRNLISWNSMIAGF-QFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNEC 297
             +F SM   +++SWNS++      +    +++++F++M  SG+  ++ T ++  ++L   
Sbjct: 540  EIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPL 599

Query: 298  SAFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQ 357
            S   EL   +      H +  K G+  +  V  AL+  YA   G +  C RLF   SG++
Sbjct: 600  SVL-ELGKQI------HSVMLKHGVTEDNAVDNALMSCYAK-SGDVDSCERLFSRMSGRR 651

Query: 358  DIVSWTAIIT-VLADQDPEQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVH 416
            D +SW ++I+  + +   ++A    C +     + D  TFSI L ACA     ++ + +H
Sbjct: 652  DAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMH 711

Query: 417  SQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAK 476
            +  ++   + D V+ +AL+  Y++ G +  + +VF  M   +  SWNSM+  YA HG  +
Sbjct: 712  AFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGR 771

Query: 477  DALELFKKLDVH---PDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACM 533
             ALE+F+++      PD  TFV++LSACSHAGLVE G++ F  M D +GI+P+++HY+C+
Sbjct: 772  KALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELMED-YGILPRIEHYSCV 830

Query: 534  VDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCR--KH-GETRLARIAAEKFKELDP 590
            +DL GR G++ + ++ +  MPMKP+++IW ++L +C+  KH  +  L   A+    EL+P
Sbjct: 831  IDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEP 890

Query: 591  KNSLGYVQMSNIYSSEGSFIEAGLIRKEMRDSRVKKQPGLSWVEVGKQVHEFTSGGHHHP 650
            +N + YV  S  +++ G + +    R  M+ + VKK+ G SWV +   VH F +G   HP
Sbjct: 891  QNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHP 950

Query: 651  HKEAIQSRLEILIGQLKEMGYVPEITLALYDTEVEHKEDQLFHHSEKMALVFAIMNEGNL 710
            + + I  +L  LI +++  GYVP     L+D E E+KE+ L +HSEK+A+ F +    + 
Sbjct: 951  NTKEIYEKLNFLIQKIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSS- 1009

Query: 711  PCGGNVIKIMKNIRICADCHNFMKLASNLFQKEIVVRDSNRFHHFKNATCSCNDYW 766
               G  I+IMKN+R+C DCH   +  S +  ++I++RDS RFHHFK+  CSC DYW
Sbjct: 1010 ---GGPIRIMKNLRVCGDCHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062



 Score =  187 bits (475), Expect = 1e-45
 Identities = 139/476 (29%), Positives = 237/476 (49%), Gaps = 27/476 (5%)

Query: 106 IQNDLFLTNHLVNMYSKCGHLEYARYVFDQMPRRNIVSWTALISGYAQCGLIRECFYLFS 165
           + +DLFL NHLVN Y+K   L+ AR VFD MP RN VSWT LISG+   GL  + F LF 
Sbjct: 96  LTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFR 155

Query: 166 GLLAH---YRPNEFAFASLLSACEEHD---IKCGMQVHAVALKISLDASVYVANALITMY 219
            +L      RP  F F S+L AC++     +   +QVH +  K    ++  V NALI+MY
Sbjct: 156 AMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMY 215

Query: 220 SKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSG 279
             CS G           A  +F +   R+LI+WN++++ +  RG       LF  M    
Sbjct: 216 GSCSVG-------PPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDD 268

Query: 280 IGFDRATLLSVFSSLNECSAFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANL 339
            G +       F SL   +     ++ L +   +  L  K+G  S++ V +ALV ++A  
Sbjct: 269 SGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVL--KSGCSSDLYVGSALVSAFAR- 325

Query: 340 GGQISDCYRLFLDTSGKQDIVSWTAIITVLADQDPEQAFLLFCQLHRENFVPDWHTFSIA 399
            G + +   ++L    +++ V+   +I  L  Q   +A        R++   +  T+ + 
Sbjct: 326 HGMLDEAKDIYLGLK-ERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVL 384

Query: 400 LKACAYFVTEQQAL----AVHSQVIKRG-FQKDTVLSNALIHAYARSGSLALSEQVFDEM 454
           L A A F T +Q L     VH+ V++ G   +   +SN L++ YA+ G++  + +VF  M
Sbjct: 385 LSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLM 444

Query: 455 CCHDLVSWNSMLKSYALHGKAKDALE---LFKKLDVHPDSTTFVALLSACSHAGLVEEGV 511
              D +SWN+++ +   +G  + A+    L ++  + P +   ++ LS+C+  GL+  G 
Sbjct: 445 EARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQ 504

Query: 512 EIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLG 567
           ++ +  +   G+         +V +YG  G++SE  ++ ++M    D V W+S++G
Sbjct: 505 QL-HCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAH-DVVSWNSIMG 558



 Score =  157 bits (398), Expect = 9e-37
 Identities = 139/522 (26%), Positives = 236/522 (44%), Gaps = 37/522 (7%)

Query: 75  TYASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKC--GHLEYARYV 132
           T+ S+  AC  +   + G A+  + L       ++  + N L++MY  C  G    A+ V
Sbjct: 170 TFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRV 229

Query: 133 FDQMPRRNIVSWTALISGYAQCG-------LIRECFYLFSGLLAHYRPNEFAFASLLSAC 185
           FD  P R++++W AL+S YA+ G       L R   Y  SG+    RP E  F SL++A 
Sbjct: 230 FDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGI--ELRPTEHTFGSLITAT 287

Query: 186 EEHDIKCGM--QVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKS 243
                  G+  Q+    LK    + +YV +AL++ +++     HG  D   D    ++  
Sbjct: 288 YLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFAR-----HGMLDEAKD----IYLG 338

Query: 244 MEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDEL 303
           ++ RN ++ N +IAG   +  G+ A  +F     S    +  T + + S++ E S  ++ 
Sbjct: 339 LKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSA-AVNVDTYVVLLSAIAEFSTAEQ- 396

Query: 304 NIPLRNCFVLHCLATKTG-LISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSW 362
              LR    +H    + G +  ++ V   LV  YA  G  I    R+F      +D +SW
Sbjct: 397 --GLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGA-IDKACRVF-QLMEARDRISW 452

Query: 363 TAIITVLADQDP--EQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVI 420
             IIT L DQ+   E A + +C + + +  P        L +CA          +H   +
Sbjct: 453 NTIITAL-DQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAV 511

Query: 421 KRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNS----MLKSYALHGKAK 476
           K G   DT +SNAL+  Y   G ++   ++F+ M  HD+VSWNS    M  S A   ++ 
Sbjct: 512 KWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESV 571

Query: 477 DALELFKKLDVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDL 536
                  K  + P+  TFV  L+A +   ++E G +I +S+   HG+         ++  
Sbjct: 572 QVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQI-HSVMLKHGVTEDNAVDNALMSC 630

Query: 537 YGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGETRLA 578
           Y + G +   E L   M  + D++ W+S++     +G  + A
Sbjct: 631 YAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEA 672



 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 102/432 (23%), Positives = 189/432 (43%), Gaps = 42/432 (9%)

Query: 196 VHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWNSM 255
           +H   +K  L   +++AN L+  Y+K             D A  +F  M  RN +SW  +
Sbjct: 87  LHLEVVKRGLTHDLFLANHLVNSYAK---------GARLDAARRVFDGMPGRNAVSWTCL 137

Query: 256 IAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNEC--SAFDELNIPLRNCFVL 313
           I+G    GL + A  LF  M   G G  R T  +  S L  C  S  D L   ++    +
Sbjct: 138 ISGHVLSGLPEDAFPLFRAMLREGPGC-RPTSFTFGSVLRACQDSGPDRLGFAVQ----V 192

Query: 314 HCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITVLADQ- 372
           H L +KT   S   V  AL+  Y +         +   DT+  +D+++W A+++V A + 
Sbjct: 193 HGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRG 252

Query: 373 DPEQAFLLFCQLHREN----FVPDWHTF-----SIALKACAYFVTEQQALAVHSQVIKRG 423
           D    F LF  +  ++      P  HTF     +  L +C+  + +Q    +  +V+K G
Sbjct: 253 DAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQ----LFVRVLKSG 308

Query: 424 FQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYA--LHGKAKDALEL 481
              D  + +AL+ A+AR G L  ++ ++  +   + V+ N ++       HG+A   + +
Sbjct: 309 CSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFM 368

Query: 482 FKKLDVHPDSTTFVALLSACSHAGLVEEGV----EIFNSMSDNHGIVPQLDHYACMVDLY 537
             +     +  T+V LLSA +     E+G+    E+   +     I  ++     +V++Y
Sbjct: 369 GARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMY 428

Query: 538 GRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHG--ETRLARIAAEKFKELDPKNSLG 595
            + G I +A  +   M  + D + W++++ +  ++G  E  +      +   + P N   
Sbjct: 429 AKCGAIDKACRVFQLMEAR-DRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSN--- 484

Query: 596 YVQMSNIYSSEG 607
           +  +S + S  G
Sbjct: 485 FAAISGLSSCAG 496



 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 49/174 (28%), Positives = 87/174 (49%), Gaps = 19/174 (10%)

Query: 414 AVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHG 473
           ++H +V+KRG   D  L+N L+++YA+   L  + +VFD M   + VSW  ++  + L G
Sbjct: 86  SLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSG 145

Query: 474 KAKDALELFKKL-----DVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLD 528
             +DA  LF+ +        P S TF ++L AC  +G    G  +       HG+V + +
Sbjct: 146 LPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAV-----QVHGLVSKTE 200

Query: 529 HYA------CMVDLYG--RVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGE 574
             +       ++ +YG   VG    A+ +  T P++ D + W++L+    K G+
Sbjct: 201 FTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVR-DLITWNALMSVYAKRGD 253


>ref|NP_172596.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 809

 Score =  409 bits (1052), Expect = e-112
 Identities = 240/697 (34%), Positives = 372/697 (52%), Gaps = 31/697 (4%)

Query: 76  YASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQ 135
           +  L   C     L+ G  +H  ++    ++  DLF    L NMY+KC  +  AR VFD+
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSL--DLFAMTGLENMYAKCRQVNEARKVFDR 195

Query: 136 MPRRNIVSWTALISGYAQCGLIRECFYLFSGLLA-HYRPNEFAFASLLSACEE-HDIKCG 193
           MP R++VSW  +++GY+Q G+ R    +   +   + +P+     S+L A      I  G
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG 255

Query: 194 MQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWN 253
            ++H  A++   D+ V ++ AL+ MY+KC          + + A  +F  M  RN++SWN
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCG---------SLETARQLFDGMLERNVVSWN 306

Query: 254 SMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRNCFVL 313
           SMI  +       +A+ +F  M   G+   + T +SV  +L+ C+   +L    R  F+ 
Sbjct: 307 SMIDAYVQNENPKEAMLIFQKMLDEGV---KPTDVSVMGALHACADLGDLE---RGRFI- 359

Query: 314 HCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITVLADQD 373
           H L+ + GL   V VV +L+  Y     ++     +F     +  +VSW A+I   A   
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCKCK-EVDTAASMFGKLQSRT-LVSWNAMILGFAQNG 417

Query: 374 -PEQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSN 432
            P  A   F Q+      PD  T+   + A A       A  +H  V++    K+  ++ 
Sbjct: 418 RPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTT 477

Query: 433 ALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELFKKLD---VHP 489
           AL+  YA+ G++ ++  +FD M    + +WN+M+  Y  HG  K ALELF+++    + P
Sbjct: 478 ALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 537

Query: 490 DSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDL 549
           +  TF++++SACSH+GLVE G++ F  M +N+ I   +DHY  MVDL GR G+++EA D 
Sbjct: 538 NGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDF 597

Query: 550 IHTMPMKPDSVIWSSLLGSCRKHGETRLARIAAEKFKELDPKNSLGYVQMSNIYSSEGSF 609
           I  MP+KP   ++ ++LG+C+ H     A  AAE+  EL+P +   +V ++NIY +   +
Sbjct: 598 IMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMW 657

Query: 610 IEAGLIRKEMRDSRVKKQPGLSWVEVGKQVHEFTSGGHHHPHKEAIQSRLEILIGQLKEM 669
            + G +R  M    ++K PG S VE+  +VH F SG   HP  + I + LE LI  +KE 
Sbjct: 658 EKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEA 717

Query: 670 GYVPEITLALYDTEVEHKEDQLFHHSEKMALVFAIMNEGNLPCGGNVIKIMKNIRICADC 729
           GYVP+  L L   E + KE  L  HSEK+A+ F ++N       G  I + KN+R+CADC
Sbjct: 718 GYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLN----TTAGTTIHVRKNLRVCADC 772

Query: 730 HNFMKLASNLFQKEIVVRDSNRFHHFKNATCSCNDYW 766
           HN  K  S +  +EIVVRD  RFHHFKN  CSC DYW
Sbjct: 773 HNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809



 Score =  158 bits (400), Expect = 6e-37
 Identities = 135/554 (24%), Positives = 260/554 (46%), Gaps = 51/554 (9%)

Query: 77  ASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQM 136
           A L   C+  K L+Q + L    + K+   Q   F T  LV+++ + G ++ A  VF+ +
Sbjct: 41  ALLLERCSSLKELRQILPL----VFKNGLYQEHFFQTK-LVSLFCRYGSVDEAARVFEPI 95

Query: 137 PRRNIVSWTALISGYAQCGLIRECFYLFSGL-LAHYRPNEFAFASLLSAC-EEHDIKCGM 194
             +  V +  ++ G+A+   + +    F  +      P  + F  LL  C +E +++ G 
Sbjct: 96  DSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGK 155

Query: 195 QVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWNS 254
           ++H + +K      ++    L  MY+KC            ++A  +F  M  R+L+SWN+
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCR---------QVNEARKVFDRMPERDLVSWNT 206

Query: 255 MIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRNCFVLH 314
           ++AG+   G+   A+ +   M    +   + + +++ S L   SA   +++       +H
Sbjct: 207 IVAGYSQNGMARMALEMVKSMCEENL---KPSFITIVSVLPAVSALRLISVGKE----IH 259

Query: 315 CLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAII-TVLADQD 373
             A ++G  S V + TALV  YA  G    +  R   D   ++++VSW ++I   + +++
Sbjct: 260 GYAMRSGFDSLVNISTALVDMYAKCGS--LETARQLFDGMLERNVVSWNSMIDAYVQNEN 317

Query: 374 PEQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNA 433
           P++A L+F ++  E   P   +   AL ACA     ++   +H   ++ G  ++  + N+
Sbjct: 318 PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNS 377

Query: 434 LIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELFKKL---DVHPD 490
           LI  Y +   +  +  +F ++    LVSWN+M+  +A +G+  DAL  F ++    V PD
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPD 437

Query: 491 STTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQ--LDH----YACMVDLYGRVGKIS 544
           + T+V++++A +   +      I       HG+V +  LD        +VD+Y + G I 
Sbjct: 438 TFTYVSVITAIAELSITHHAKWI-------HGVVMRSCLDKNVFVTTALVDMYAKCGAIM 490

Query: 545 EAEDLIHTMPMKPDSVIWSSLLGSCRKHGETRLARIAAEKFKELD----PKNSLGYVQMS 600
            A  LI  M  +     W++++     HG     + A E F+E+       N + ++ + 
Sbjct: 491 IAR-LIFDMMSERHVTTWNAMIDGYGTHG---FGKAALELFEEMQKGTIKPNGVTFLSVI 546

Query: 601 NIYSSEGSFIEAGL 614
           +  S  G  +EAGL
Sbjct: 547 SACSHSG-LVEAGL 559


>ref|NP_190486.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana] gi|58013020|gb|AAW62963.1| embryo-defective
           2261 [Arabidopsis thaliana] gi|58013018|gb|AAW62962.1|
           embryo-defective 2261 [Arabidopsis thaliana]
          Length = 850

 Score =  408 bits (1049), Expect = e-112
 Identities = 245/703 (34%), Positives = 386/703 (54%), Gaps = 33/703 (4%)

Query: 76  YASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGH-LEYARYVFD 134
           Y ++  AC+ +  +  G     +++ K    ++D+ +   L++M+ K  +  E A  VFD
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLM-KTGHFESDVCVGCSLIDMFVKGENSFENAYKVFD 227

Query: 135 QMPRRNIVSWTALISGYAQCGLIRECFYLFSGL-LAHYRPNEFAFASLLSACEE-HDIKC 192
           +M   N+V+WT +I+   Q G  RE    F  + L+ +  ++F  +S+ SAC E  ++  
Sbjct: 228 KMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSL 287

Query: 193 GMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISW 252
           G Q+H+ A++  L   V  +  L+ MY+KCS       D + DD   +F  ME  +++SW
Sbjct: 288 GKQLHSWAIRSGLVDDVECS--LVDMYAKCSA------DGSVDDCRKVFDRMEDHSVMSW 339

Query: 253 NSMIAGFQFR-GLGDKAIRLFAHMYCSG-IGFDRATLLSVFSSLNECSAFDELNIPLRNC 310
            ++I G+     L  +AI LF+ M   G +  +  T  S F       A   L+ P    
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFK------ACGNLSDPRVGK 393

Query: 311 FVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITVLA 370
            VL   A K GL S   V  +++  +     ++ D  R F   S K  +   T +     
Sbjct: 394 QVLG-QAFKRGLASNSSVANSVISMFVK-SDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451

Query: 371 DQDPEQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTVL 430
           + + EQAF L  ++          TF+  L   A   + ++   +HSQV+K G   +  +
Sbjct: 452 NLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPV 511

Query: 431 SNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELFKKL---DV 487
            NALI  Y++ GS+  + +VF+ M   +++SW SM+  +A HG A   LE F ++    V
Sbjct: 512 CNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGV 571

Query: 488 HPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISEAE 547
            P+  T+VA+LSACSH GLV EG   FNSM ++H I P+++HYACMVDL  R G +++A 
Sbjct: 572 KPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAF 631

Query: 548 DLIHTMPMKPDSVIWSSLLGSCRKHGETRLARIAAEKFKELDPKNSLGYVQMSNIYSSEG 607
           + I+TMP + D ++W + LG+CR H  T L ++AA K  ELDP     Y+Q+SNIY+  G
Sbjct: 632 EFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAG 691

Query: 608 SFIEAGLIRKEMRDSRVKKQPGLSWVEVGKQVHEFTSGGHHHPHKEAIQSRLEILIGQLK 667
            + E+  +R++M++  + K+ G SW+EVG ++H+F  G   HP+   I   L+ LI ++K
Sbjct: 692 KWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIK 751

Query: 668 EMGYVPEITLALYDTEVEH----KEDQLFHHSEKMALVFAIMNEGNLPCGGNVIKIMKNI 723
             GYVP+  L L+  E E+    KE  L+ HSEK+A+ F +++          +++ KN+
Sbjct: 752 RCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSK----SRPVRVFKNL 807

Query: 724 RICADCHNFMKLASNLFQKEIVVRDSNRFHHFKNATCSCNDYW 766
           R+C DCHN MK  S +  +EIV+RD NRFHHFK+  CSCNDYW
Sbjct: 808 RVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850



 Score =  174 bits (442), Expect = 7e-42
 Identities = 145/548 (26%), Positives = 263/548 (47%), Gaps = 37/548 (6%)

Query: 75  TYASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFD 134
           T++SL  +C + +  + G  +H  ++  D  I+ D  L N L+++YSK G    A  VF+
Sbjct: 64  TFSSLLKSCIRARDFRLGKLVHARLIEFD--IEPDSVLYNSLISLYSKSGDSAKAEDVFE 121

Query: 135 QMPR---RNIVSWTALISGYAQCGLIRECFYLFSGLL-AHYRPNEFAFASLLSACEEHD- 189
            M R   R++VSW+A+++ Y   G   +   +F   L     PN++ + +++ AC   D 
Sbjct: 122 TMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDF 181

Query: 190 IKCGMQVHAVALKIS-LDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRN 248
           +  G       +K    ++ V V  +LI M+ K    F        ++A+ +F  M   N
Sbjct: 182 VGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF--------ENAYKVFDKMSELN 233

Query: 249 LISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLR 308
           +++W  MI      G   +AIR F  M  SG   D+ TL SVFS+   C+  + L++  +
Sbjct: 234 VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSA---CAELENLSLGKQ 290

Query: 309 NCFVLHCLATKTGLISEVEVVTALVKSYA--NLGGQISDCYRLFLDTSGKQDIVSWTAII 366
               LH  A ++GL+ +VE   +LV  YA  +  G + DC ++F D      ++SWTA+I
Sbjct: 291 ----LHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVF-DRMEDHSVMSWTALI 343

Query: 367 TVLADQD--PEQAFLLFCQLHRENFV-PDWHTFSIALKACAYFVTEQQALAVHSQVIKRG 423
           T          +A  LF ++  +  V P+  TFS A KAC      +    V  Q  KRG
Sbjct: 344 TGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRG 403

Query: 424 FQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELFK 483
              ++ ++N++I  + +S  +  +++ F+ +   +LVS+N+ L     +   + A +L  
Sbjct: 404 LASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLS 463

Query: 484 KL---DVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRV 540
           ++   ++   + TF +LLS  ++ G + +G +I +S     G+         ++ +Y + 
Sbjct: 464 EITERELGVSAFTFASLLSGVANVGSIRKGEQI-HSQVVKLGLSCNQPVCNALISMYSKC 522

Query: 541 GKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHG-ETRLARIAAEKFKELDPKNSLGYVQM 599
           G I  A  + + M  + + + W+S++    KHG   R+     +  +E    N + YV +
Sbjct: 523 GSIDTASRVFNFMENR-NVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAI 581

Query: 600 SNIYSSEG 607
            +  S  G
Sbjct: 582 LSACSHVG 589



 Score = 38.1 bits (87), Expect = 1.1
 Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 19/141 (13%)

Query: 535 DLYGRVGKISEAEDLIHTMPMKP-DSVIWSSLLGSCRKHGETRLARIAAEKFKELD-PKN 592
           DL G V  +    DL+    ++P DSV +SSLL SC +  + RL ++   +  E D   +
Sbjct: 41  DLRGAVSAL----DLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPD 96

Query: 593 SLGYVQMSNIYSSEGSFIEAGLIRKEMRDSRVKKQPGLSWVEVGKQVHEFTSGGHHHPHK 652
           S+ Y  + ++YS  G   +A  + + MR  R  K+  +SW  +          G++    
Sbjct: 97  SVLYNSLISLYSKSGDSAKAEDVFETMR--RFGKRDVVSWSAM------MACYGNNGREL 148

Query: 653 EAIQSRLEILIGQLKEMGYVP 673
           +AI+  +E L     E+G VP
Sbjct: 149 DAIKVFVEFL-----ELGLVP 164


>ref|NP_188131.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 689

 Score =  407 bits (1047), Expect = e-112
 Identities = 246/703 (34%), Positives = 382/703 (53%), Gaps = 30/703 (4%)

Query: 74  QTYASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVF 133
           Q   S+   C +     QG  +H Y+L     +  +L  +N+L++MY KC     A  VF
Sbjct: 7   QNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGL--NLITSNYLIDMYCKCREPLMAYKVF 64

Query: 134 DQMPRRNIVSWTALISGYAQCGLIRECFYLFS--GLLAHYRPNEFAFASLLSACEE-HDI 190
           D MP RN+VSW+AL+SG+   G ++    LFS  G    Y PNEF F++ L AC   + +
Sbjct: 65  DSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY-PNEFTFSTNLKACGLLNAL 123

Query: 191 KCGMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNLI 250
           + G+Q+H   LKI  +  V V N+L+ MYSKC            ++A  +F+ +  R+LI
Sbjct: 124 EKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCG---------RINEAEKVFRRIVDRSLI 174

Query: 251 SWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRNC 310
           SWN+MIAGF   G G KA+  F  M  + I  +R    ++ S L  CS+   +    +  
Sbjct: 175 SWNAMIAGFVHAGYGSKALDTFGMMQEANIK-ERPDEFTLTSLLKACSSTGMIYAGKQ-- 231

Query: 311 FVLHCLATKTGLI--SEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITV 368
             +H    ++G    S   +  +LV  Y   G   S   R   D   ++ ++SW+++I  
Sbjct: 232 --IHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA--RKAFDQIKEKTMISWSSLILG 287

Query: 369 LADQDP-EQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKD 427
            A +    +A  LF +L   N   D    S  +   A F   +Q   + +  +K     +
Sbjct: 288 YAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLE 347

Query: 428 TVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELFKKL-- 485
           T + N+++  Y + G +  +E+ F EM   D++SW  ++  Y  HG  K ++ +F ++  
Sbjct: 348 TSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLR 407

Query: 486 -DVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKIS 544
            ++ PD   ++A+LSACSH+G+++EG E+F+ + + HGI P+++HYAC+VDL GR G++ 
Sbjct: 408 HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLK 467

Query: 545 EAEDLIHTMPMKPDSVIWSSLLGSCRKHGETRLARIAAEKFKELDPKNSLGYVQMSNIYS 604
           EA+ LI TMP+KP+  IW +LL  CR HG+  L +   +    +D KN   YV MSN+Y 
Sbjct: 468 EAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYG 527

Query: 605 SEGSFIEAGLIRKEMRDSRVKKQPGLSWVEVGKQVHEFTSGGHHHPHKEAIQSRLEILIG 664
             G + E G  R+      +KK+ G+SWVE+ ++VH F SG   HP    IQ  L+    
Sbjct: 528 QAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAER 587

Query: 665 QLK-EMGYVPEITLALYDTEVEHKEDQLFHHSEKMALVFAIMNEGNLPCGGNVIKIMKNI 723
           +L+ E+GYV  +   L+D + E KE+ L  HSEK+A+  A+   G L   G  I++ KN+
Sbjct: 588 RLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALAT-GGLNQKGKTIRVFKNL 646

Query: 724 RICADCHNFMKLASNLFQKEIVVRDSNRFHHFKNATCSCNDYW 766
           R+C DCH F+K  S + +   VVRD+ RFH F++  CSC DYW
Sbjct: 647 RVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689


>emb|CAB78407.1| putative protein [Arabidopsis thaliana] gi|4455294|emb|CAB36829.1|
            putative protein [Arabidopsis thaliana]
            gi|7485695|pir||T05234 hypothetical protein F18A5.40 -
            Arabidopsis thaliana
          Length = 1024

 Score =  407 bits (1045), Expect = e-112
 Identities = 238/732 (32%), Positives = 385/732 (52%), Gaps = 35/732 (4%)

Query: 42   IRALSLQGNLEEALSLLYTHDKHILTHSSLSLQTYASLFHACAKNKCLQQGMALHNYILH 101
            I  LS  G  E+A+ L        L   S    T ASL  AC+ +  L +G  LH Y   
Sbjct: 321  INGLSQCGYGEKAMELFKRMHLDGLEPDS---NTLASLVVACSADGTLFRGQQLHAYTTK 377

Query: 102  KDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQMPRRNIVSWTALISGYAQCGLIRECF 161
                  N +     L+N+Y+KC  +E A   F +    N+V W  ++  Y     +R  F
Sbjct: 378  LGFASNNKI--EGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF 435

Query: 162  YLFSGL-LAHYRPNEFAFASLLSACEE-HDIKCGMQVHAVALKISLDASVYVANALITMY 219
             +F  + +    PN++ + S+L  C    D++ G Q+H+  +K +   + YV + LI MY
Sbjct: 436  RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY 495

Query: 220  SKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSG 279
            +K             D AW +      ++++SW +MIAG+      DKA+  F  M   G
Sbjct: 496  AKLG---------KLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 546

Query: 280  IGFDRATLLSVFSSLNECSAFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANL 339
            I  D   L +  S+     A  E          +H  A  +G  S++    ALV  Y+  
Sbjct: 547  IRSDEVGLTNAVSACAGLQALKEGQ-------QIHAQACVSGFSSDLPFQNALVTLYSRC 599

Query: 340  GGQISDCYRLFLDTSGKQDIVSWTAIITVLADQ-DPEQAFLLFCQLHRENFVPDWHTFSI 398
            G +I + Y  F  T    D ++W A+++      + E+A  +F +++RE    +  TF  
Sbjct: 600  G-KIEESYLAFEQTEAG-DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGS 657

Query: 399  ALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHD 458
            A+KA +     +Q   VH+ + K G+  +T + NALI  YA+ GS++ +E+ F E+   +
Sbjct: 658  AVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKN 717

Query: 459  LVSWNSMLKSYALHGKAKDALELFKKL---DVHPDSTTFVALLSACSHAGLVEEGVEIFN 515
             VSWN+++ +Y+ HG   +AL+ F ++   +V P+  T V +LSACSH GLV++G+  F 
Sbjct: 718  EVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFE 777

Query: 516  SMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGET 575
            SM+  +G+ P+ +HY C+VD+  R G +S A++ I  MP+KPD+++W +LL +C  H   
Sbjct: 778  SMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNM 837

Query: 576  RLARIAAEKFKELDPKNSLGYVQMSNIYSSEGSFIEAGLIRKEMRDSRVKKQPGLSWVEV 635
             +   AA    EL+P++S  YV +SN+Y+    +    L R++M++  VKK+PG SW+EV
Sbjct: 838  EIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEV 897

Query: 636  GKQVHEFTSGGHHHPHKEAIQSRLEILIGQLKEMGYVPEITLALYDTEVEHKEDQLFHHS 695
               +H F  G  +HP  + I    + L  +  E+GYV +    L + + E K+  +F HS
Sbjct: 898  KNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHS 957

Query: 696  EKMALVFAIMN-EGNLPCGGNVIKIMKNIRICADCHNFMKLASNLFQKEIVVRDSNRFHH 754
            EK+A+ F +++    +P     I +MKN+R+C DCH ++K  S +  +EI+VRD+ RFHH
Sbjct: 958  EKLAISFGLLSLPATVP-----INVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHH 1012

Query: 755  FKNATCSCNDYW 766
            F+   CSC DYW
Sbjct: 1013 FEGGACSCKDYW 1024



 Score =  187 bits (476), Expect = 9e-46
 Identities = 153/557 (27%), Positives = 265/557 (47%), Gaps = 35/557 (6%)

Query: 30  PETTISTNIDAQIRALSLQGNLEEALSLLYTHDKHILTHSSLSLQTYASLFHACAKNKCL 89
           PE TI T  +  I+ L+ +  + E   L        +T +     T++ +  AC      
Sbjct: 107 PERTIFT-WNKMIKELASRNLIGEVFGLFVRMVSENVTPNE---GTFSGVLEACRGGSVA 162

Query: 90  QQGMA-LHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQMPRRNIVSWTALI 148
              +  +H  IL++   +++   + N L+++YS+ G ++ AR VFD +  ++  SW A+I
Sbjct: 163 FDVVEQIHARILYQG--LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 220

Query: 149 SGYAQCGLIRECFYLFSGL-LAHYRPNEFAFASLLSACEE-HDIKCGMQVHAVALKISLD 206
           SG ++     E   LF  + +    P  +AF+S+LSAC++   ++ G Q+H + LK+   
Sbjct: 221 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 280

Query: 207 ASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWNSMIAGFQFRGLGD 266
           +  YV NAL+++Y      FH G   + +    +F +M  R+ +++N++I G    G G+
Sbjct: 281 SDTYVCNALVSLY------FHLGNLISAEH---IFSNMSQRDAVTYNTLINGLSQCGYGE 331

Query: 267 KAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRNCFVLHCLATKTGLISEV 326
           KA+ LF  M+  G+  D  TL S+  +   CSA   L    +    LH   TK G  S  
Sbjct: 332 KAMELFKRMHLDGLEPDSNTLASLVVA---CSADGTLFRGQQ----LHAYTTKLGFASNN 384

Query: 327 EVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITV--LADQDPEQAFLLFCQL 384
           ++  AL+  YA     I      FL+T   +++V W  ++    L D D   +F +F Q+
Sbjct: 385 KIEGALLNLYAKC-ADIETALDYFLETE-VENVVLWNVMLVAYGLLD-DLRNSFRIFRQM 441

Query: 385 HRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSL 444
             E  VP+ +T+   LK C      +    +HSQ+IK  FQ +  + + LI  YA+ G L
Sbjct: 442 QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKL 501

Query: 445 ALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELFKKL---DVHPDSTTFVALLSAC 501
             +  +       D+VSW +M+  Y  +     AL  F+++    +  D       +SAC
Sbjct: 502 DTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC 561

Query: 502 SHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVI 561
           +    ++EG +I ++ +   G    L     +V LY R GKI E+  L        D++ 
Sbjct: 562 AGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGKIEESY-LAFEQTEAGDNIA 619

Query: 562 WSSLLGSCRKHGETRLA 578
           W++L+   ++ G    A
Sbjct: 620 WNALVSGFQQSGNNEEA 636



 Score =  181 bits (458), Expect = 1e-43
 Identities = 150/503 (29%), Positives = 243/503 (47%), Gaps = 34/503 (6%)

Query: 74  QTYASLFHACAK-NKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYV 132
           QT   L   C K N  L +G  LH+ IL     + ++  L+  L + Y   G L  A  V
Sbjct: 45  QTLKWLLEGCLKTNGSLDEGRKLHSQILKLG--LDSNGCLSEKLFDFYLFKGDLYGAFKV 102

Query: 133 FDQMPRRNIVSWTALISGYAQCGLIRECFYLFSGLLA-HYRPNEFAFASLLSACEEHDIK 191
           FD+MP R I +W  +I   A   LI E F LF  +++ +  PNE  F+ +L AC    + 
Sbjct: 103 FDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA 162

Query: 192 CGM--QVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNL 249
             +  Q+HA  L   L  S  V N LI +YS+   GF        D A  +F  +  ++ 
Sbjct: 163 FDVVEQIHARILYQGLRDSTVVCNPLIDLYSR--NGF-------VDLARRVFDGLRLKDH 213

Query: 250 ISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRN 309
            SW +MI+G        +AIRLF  MY  GI     T  +  S L+ C   + L I  + 
Sbjct: 214 SSWVAMISGLSKNECEAEAIRLFCDMYVLGI---MPTPYAFSSVLSACKKIESLEIGEQ- 269

Query: 310 CFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITVL 369
              LH L  K G  S+  V  ALV  Y +LG  IS    +F + S ++D V++  +I  L
Sbjct: 270 ---LHGLVLKLGFSSDTYVCNALVSLYFHLGNLIS-AEHIFSNMS-QRDAVTYNTLINGL 324

Query: 370 ADQD-PEQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDT 428
           +     E+A  LF ++H +   PD +T +  + AC+   T  +   +H+   K GF  + 
Sbjct: 325 SQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNN 384

Query: 429 VLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELFKKLDVH 488
            +  AL++ YA+   +  +   F E    ++V WN ML +Y L    +++  +F+++ + 
Sbjct: 385 KIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE 444

Query: 489 ---PDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYAC--MVDLYGRVGKI 543
              P+  T+ ++L  C   G +E G +I + +   +    QL+ Y C  ++D+Y ++GK+
Sbjct: 445 EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF---QLNAYVCSVLIDMYAKLGKL 501

Query: 544 SEAEDLIHTMPMKPDSVIWSSLL 566
             A D++     K D V W++++
Sbjct: 502 DTAWDILIRFAGK-DVVSWTTMI 523



 Score =  171 bits (432), Expect = 1e-40
 Identities = 125/504 (24%), Positives = 238/504 (46%), Gaps = 28/504 (5%)

Query: 76  YASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQ 135
           ++S+  AC K + L+ G  LH  +L       +D ++ N LV++Y   G+L  A ++F  
Sbjct: 251 FSSVLSACKKIESLEIGEQLHGLVLKLG--FSSDTYVCNALVSLYFHLGNLISAEHIFSN 308

Query: 136 MPRRNIVSWTALISGYAQCGLIRECFYLFSGL-LAHYRPNEFAFASLLSACE-EHDIKCG 193
           M +R+ V++  LI+G +QCG   +   LF  + L    P+    ASL+ AC  +  +  G
Sbjct: 309 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 368

Query: 194 MQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWN 253
            Q+HA   K+   ++  +  AL+ +Y+KC+           + A   F   E  N++ WN
Sbjct: 369 QQLHAYTTKLGFASNNKIEGALLNLYAKCA---------DIETALDYFLETEVENVVLWN 419

Query: 254 SMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRNCFVL 313
            M+  +        + R+F  M    I  ++ T  S+   L  C    +L +  +    +
Sbjct: 420 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI---LKTCIRLGDLELGEQ----I 472

Query: 314 HCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITVLADQD 373
           H    KT       V + L+  YA L G++   + + +  +GK D+VSWT +I      +
Sbjct: 473 HSQIIKTNFQLNAYVCSVLIDMYAKL-GKLDTAWDILIRFAGK-DVVSWTTMIAGYTQYN 530

Query: 374 -PEQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSN 432
             ++A   F Q+       D    + A+ ACA     ++   +H+Q    GF  D    N
Sbjct: 531 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN 590

Query: 433 ALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELFKKLD---VHP 489
           AL+  Y+R G +  S   F++    D ++WN+++  +   G  ++AL +F +++   +  
Sbjct: 591 ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN 650

Query: 490 DSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDL 549
           ++ TF + + A S    +++G ++ +++    G   + +    ++ +Y + G IS+AE  
Sbjct: 651 NNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 709

Query: 550 IHTMPMKPDSVIWSSLLGSCRKHG 573
              +  K + V W++++ +  KHG
Sbjct: 710 FLEVSTK-NEVSWNAIINAYSKHG 732



 Score =  128 bits (322), Expect = 6e-28
 Identities = 106/402 (26%), Positives = 178/402 (43%), Gaps = 27/402 (6%)

Query: 172 RPNEFAFASLLSACEEHD--IKCGMQVHAVALKISLDASVYVANALITMYSKCSGGFHGG 229
           RPN      LL  C + +  +  G ++H+  LK+ LD++  ++  L   Y    G  +G 
Sbjct: 41  RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL-FKGDLYG- 98

Query: 230 YDPTGDDAWTMFKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLS 289
                  A+ +F  M  R + +WN MI     R L  +   LF  M    +  +  T   
Sbjct: 99  -------AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 151

Query: 290 VFSSLNECS-AFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYR 348
           V  +    S AFD +         +H      GL     V   L+  Y+  G    D  R
Sbjct: 152 VLEACRGGSVAFDVVE-------QIHARILYQGLRDSTVVCNPLIDLYSRNG--FVDLAR 202

Query: 349 LFLDTSGKQDIVSWTAIITVLADQDPE-QAFLLFCQLHRENFVPDWHTFSIALKACAYFV 407
              D    +D  SW A+I+ L+  + E +A  LFC ++    +P  + FS  L AC    
Sbjct: 203 RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 262

Query: 408 TEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLK 467
           + +    +H  V+K GF  DT + NAL+  Y   G+L  +E +F  M   D V++N+++ 
Sbjct: 263 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 322

Query: 468 SYALHGKAKDALELFKKL---DVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIV 524
             +  G  + A+ELFK++    + PDS T  +L+ ACS  G +  G ++ ++ +   G  
Sbjct: 323 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFA 381

Query: 525 PQLDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLL 566
                   +++LY +   I  A D      ++ + V+W+ +L
Sbjct: 382 SNNKIEGALLNLYAKCADIETALDYFLETEVE-NVVLWNVML 422



 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 3/174 (1%)

Query: 415 VHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGK 474
           +HSQ++K G   +  LS  L   Y   G L  + +VFDEM    + +WN M+K  A    
Sbjct: 67  LHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNL 126

Query: 475 AKDALELFKKL---DVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYA 531
             +   LF ++   +V P+  TF  +L AC    +  + VE  ++     G+        
Sbjct: 127 IGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCN 186

Query: 532 CMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGETRLARIAAEKF 585
            ++DLY R G +  A  +   + +K  S   + + G  +   E    R+  + +
Sbjct: 187 PLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 240


>ref|NP_193101.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
            thaliana]
          Length = 1064

 Score =  407 bits (1045), Expect = e-112
 Identities = 238/732 (32%), Positives = 385/732 (52%), Gaps = 35/732 (4%)

Query: 42   IRALSLQGNLEEALSLLYTHDKHILTHSSLSLQTYASLFHACAKNKCLQQGMALHNYILH 101
            I  LS  G  E+A+ L        L   S    T ASL  AC+ +  L +G  LH Y   
Sbjct: 361  INGLSQCGYGEKAMELFKRMHLDGLEPDS---NTLASLVVACSADGTLFRGQQLHAYTTK 417

Query: 102  KDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQMPRRNIVSWTALISGYAQCGLIRECF 161
                  N +     L+N+Y+KC  +E A   F +    N+V W  ++  Y     +R  F
Sbjct: 418  LGFASNNKI--EGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF 475

Query: 162  YLFSGL-LAHYRPNEFAFASLLSACEE-HDIKCGMQVHAVALKISLDASVYVANALITMY 219
             +F  + +    PN++ + S+L  C    D++ G Q+H+  +K +   + YV + LI MY
Sbjct: 476  RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY 535

Query: 220  SKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSG 279
            +K             D AW +      ++++SW +MIAG+      DKA+  F  M   G
Sbjct: 536  AKLG---------KLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586

Query: 280  IGFDRATLLSVFSSLNECSAFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANL 339
            I  D   L +  S+     A  E          +H  A  +G  S++    ALV  Y+  
Sbjct: 587  IRSDEVGLTNAVSACAGLQALKEGQ-------QIHAQACVSGFSSDLPFQNALVTLYSRC 639

Query: 340  GGQISDCYRLFLDTSGKQDIVSWTAIITVLADQ-DPEQAFLLFCQLHRENFVPDWHTFSI 398
            G +I + Y  F  T    D ++W A+++      + E+A  +F +++RE    +  TF  
Sbjct: 640  G-KIEESYLAFEQTEAG-DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGS 697

Query: 399  ALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHD 458
            A+KA +     +Q   VH+ + K G+  +T + NALI  YA+ GS++ +E+ F E+   +
Sbjct: 698  AVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKN 757

Query: 459  LVSWNSMLKSYALHGKAKDALELFKKL---DVHPDSTTFVALLSACSHAGLVEEGVEIFN 515
             VSWN+++ +Y+ HG   +AL+ F ++   +V P+  T V +LSACSH GLV++G+  F 
Sbjct: 758  EVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFE 817

Query: 516  SMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGET 575
            SM+  +G+ P+ +HY C+VD+  R G +S A++ I  MP+KPD+++W +LL +C  H   
Sbjct: 818  SMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNM 877

Query: 576  RLARIAAEKFKELDPKNSLGYVQMSNIYSSEGSFIEAGLIRKEMRDSRVKKQPGLSWVEV 635
             +   AA    EL+P++S  YV +SN+Y+    +    L R++M++  VKK+PG SW+EV
Sbjct: 878  EIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEV 937

Query: 636  GKQVHEFTSGGHHHPHKEAIQSRLEILIGQLKEMGYVPEITLALYDTEVEHKEDQLFHHS 695
               +H F  G  +HP  + I    + L  +  E+GYV +    L + + E K+  +F HS
Sbjct: 938  KNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHS 997

Query: 696  EKMALVFAIMN-EGNLPCGGNVIKIMKNIRICADCHNFMKLASNLFQKEIVVRDSNRFHH 754
            EK+A+ F +++    +P     I +MKN+R+C DCH ++K  S +  +EI+VRD+ RFHH
Sbjct: 998  EKLAISFGLLSLPATVP-----INVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHH 1052

Query: 755  FKNATCSCNDYW 766
            F+   CSC DYW
Sbjct: 1053 FEGGACSCKDYW 1064



 Score =  187 bits (476), Expect = 9e-46
 Identities = 153/557 (27%), Positives = 265/557 (47%), Gaps = 35/557 (6%)

Query: 30  PETTISTNIDAQIRALSLQGNLEEALSLLYTHDKHILTHSSLSLQTYASLFHACAKNKCL 89
           PE TI T  +  I+ L+ +  + E   L        +T +     T++ +  AC      
Sbjct: 147 PERTIFT-WNKMIKELASRNLIGEVFGLFVRMVSENVTPNE---GTFSGVLEACRGGSVA 202

Query: 90  QQGMA-LHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQMPRRNIVSWTALI 148
              +  +H  IL++   +++   + N L+++YS+ G ++ AR VFD +  ++  SW A+I
Sbjct: 203 FDVVEQIHARILYQG--LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 260

Query: 149 SGYAQCGLIRECFYLFSGL-LAHYRPNEFAFASLLSACEE-HDIKCGMQVHAVALKISLD 206
           SG ++     E   LF  + +    P  +AF+S+LSAC++   ++ G Q+H + LK+   
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320

Query: 207 ASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWNSMIAGFQFRGLGD 266
           +  YV NAL+++Y      FH G   + +    +F +M  R+ +++N++I G    G G+
Sbjct: 321 SDTYVCNALVSLY------FHLGNLISAEH---IFSNMSQRDAVTYNTLINGLSQCGYGE 371

Query: 267 KAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRNCFVLHCLATKTGLISEV 326
           KA+ LF  M+  G+  D  TL S+  +   CSA   L    +    LH   TK G  S  
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVA---CSADGTLFRGQQ----LHAYTTKLGFASNN 424

Query: 327 EVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITV--LADQDPEQAFLLFCQL 384
           ++  AL+  YA     I      FL+T   +++V W  ++    L D D   +F +F Q+
Sbjct: 425 KIEGALLNLYAKC-ADIETALDYFLETE-VENVVLWNVMLVAYGLLD-DLRNSFRIFRQM 481

Query: 385 HRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSL 444
             E  VP+ +T+   LK C      +    +HSQ+IK  FQ +  + + LI  YA+ G L
Sbjct: 482 QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKL 541

Query: 445 ALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELFKKL---DVHPDSTTFVALLSAC 501
             +  +       D+VSW +M+  Y  +     AL  F+++    +  D       +SAC
Sbjct: 542 DTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC 601

Query: 502 SHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVI 561
           +    ++EG +I ++ +   G    L     +V LY R GKI E+  L        D++ 
Sbjct: 602 AGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGKIEESY-LAFEQTEAGDNIA 659

Query: 562 WSSLLGSCRKHGETRLA 578
           W++L+   ++ G    A
Sbjct: 660 WNALVSGFQQSGNNEEA 676



 Score =  181 bits (458), Expect = 1e-43
 Identities = 150/503 (29%), Positives = 243/503 (47%), Gaps = 34/503 (6%)

Query: 74  QTYASLFHACAK-NKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYV 132
           QT   L   C K N  L +G  LH+ IL     + ++  L+  L + Y   G L  A  V
Sbjct: 85  QTLKWLLEGCLKTNGSLDEGRKLHSQILKLG--LDSNGCLSEKLFDFYLFKGDLYGAFKV 142

Query: 133 FDQMPRRNIVSWTALISGYAQCGLIRECFYLFSGLLA-HYRPNEFAFASLLSACEEHDIK 191
           FD+MP R I +W  +I   A   LI E F LF  +++ +  PNE  F+ +L AC    + 
Sbjct: 143 FDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA 202

Query: 192 CGM--QVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNL 249
             +  Q+HA  L   L  S  V N LI +YS+   GF        D A  +F  +  ++ 
Sbjct: 203 FDVVEQIHARILYQGLRDSTVVCNPLIDLYSR--NGF-------VDLARRVFDGLRLKDH 253

Query: 250 ISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRN 309
            SW +MI+G        +AIRLF  MY  GI     T  +  S L+ C   + L I  + 
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGI---MPTPYAFSSVLSACKKIESLEIGEQ- 309

Query: 310 CFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITVL 369
              LH L  K G  S+  V  ALV  Y +LG  IS    +F + S ++D V++  +I  L
Sbjct: 310 ---LHGLVLKLGFSSDTYVCNALVSLYFHLGNLIS-AEHIFSNMS-QRDAVTYNTLINGL 364

Query: 370 ADQD-PEQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDT 428
           +     E+A  LF ++H +   PD +T +  + AC+   T  +   +H+   K GF  + 
Sbjct: 365 SQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNN 424

Query: 429 VLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELFKKLDVH 488
            +  AL++ YA+   +  +   F E    ++V WN ML +Y L    +++  +F+++ + 
Sbjct: 425 KIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE 484

Query: 489 ---PDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYAC--MVDLYGRVGKI 543
              P+  T+ ++L  C   G +E G +I + +   +    QL+ Y C  ++D+Y ++GK+
Sbjct: 485 EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF---QLNAYVCSVLIDMYAKLGKL 541

Query: 544 SEAEDLIHTMPMKPDSVIWSSLL 566
             A D++     K D V W++++
Sbjct: 542 DTAWDILIRFAGK-DVVSWTTMI 563



 Score =  171 bits (432), Expect = 1e-40
 Identities = 125/504 (24%), Positives = 238/504 (46%), Gaps = 28/504 (5%)

Query: 76  YASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQ 135
           ++S+  AC K + L+ G  LH  +L       +D ++ N LV++Y   G+L  A ++F  
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLG--FSSDTYVCNALVSLYFHLGNLISAEHIFSN 348

Query: 136 MPRRNIVSWTALISGYAQCGLIRECFYLFSGL-LAHYRPNEFAFASLLSACE-EHDIKCG 193
           M +R+ V++  LI+G +QCG   +   LF  + L    P+    ASL+ AC  +  +  G
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408

Query: 194 MQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWN 253
            Q+HA   K+   ++  +  AL+ +Y+KC+           + A   F   E  N++ WN
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCA---------DIETALDYFLETEVENVVLWN 459

Query: 254 SMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRNCFVL 313
            M+  +        + R+F  M    I  ++ T  S+   L  C    +L +  +    +
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI---LKTCIRLGDLELGEQ----I 512

Query: 314 HCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITVLADQD 373
           H    KT       V + L+  YA L G++   + + +  +GK D+VSWT +I      +
Sbjct: 513 HSQIIKTNFQLNAYVCSVLIDMYAKL-GKLDTAWDILIRFAGK-DVVSWTTMIAGYTQYN 570

Query: 374 -PEQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSN 432
             ++A   F Q+       D    + A+ ACA     ++   +H+Q    GF  D    N
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN 630

Query: 433 ALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELFKKLD---VHP 489
           AL+  Y+R G +  S   F++    D ++WN+++  +   G  ++AL +F +++   +  
Sbjct: 631 ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN 690

Query: 490 DSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDL 549
           ++ TF + + A S    +++G ++ +++    G   + +    ++ +Y + G IS+AE  
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 749

Query: 550 IHTMPMKPDSVIWSSLLGSCRKHG 573
              +  K + V W++++ +  KHG
Sbjct: 750 FLEVSTK-NEVSWNAIINAYSKHG 772



 Score =  128 bits (322), Expect = 6e-28
 Identities = 106/402 (26%), Positives = 178/402 (43%), Gaps = 27/402 (6%)

Query: 172 RPNEFAFASLLSACEEHD--IKCGMQVHAVALKISLDASVYVANALITMYSKCSGGFHGG 229
           RPN      LL  C + +  +  G ++H+  LK+ LD++  ++  L   Y    G  +G 
Sbjct: 81  RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL-FKGDLYG- 138

Query: 230 YDPTGDDAWTMFKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLS 289
                  A+ +F  M  R + +WN MI     R L  +   LF  M    +  +  T   
Sbjct: 139 -------AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 191

Query: 290 VFSSLNECS-AFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCYR 348
           V  +    S AFD +         +H      GL     V   L+  Y+  G    D  R
Sbjct: 192 VLEACRGGSVAFDVVE-------QIHARILYQGLRDSTVVCNPLIDLYSRNG--FVDLAR 242

Query: 349 LFLDTSGKQDIVSWTAIITVLADQDPE-QAFLLFCQLHRENFVPDWHTFSIALKACAYFV 407
              D    +D  SW A+I+ L+  + E +A  LFC ++    +P  + FS  L AC    
Sbjct: 243 RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302

Query: 408 TEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLK 467
           + +    +H  V+K GF  DT + NAL+  Y   G+L  +E +F  M   D V++N+++ 
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 362

Query: 468 SYALHGKAKDALELFKKL---DVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIV 524
             +  G  + A+ELFK++    + PDS T  +L+ ACS  G +  G ++ ++ +   G  
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFA 421

Query: 525 PQLDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLL 566
                   +++LY +   I  A D      ++ + V+W+ +L
Sbjct: 422 SNNKIEGALLNLYAKCADIETALDYFLETEVE-NVVLWNVML 462



 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 3/174 (1%)

Query: 415 VHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGK 474
           +HSQ++K G   +  LS  L   Y   G L  + +VFDEM    + +WN M+K  A    
Sbjct: 107 LHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNL 166

Query: 475 AKDALELFKKL---DVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYA 531
             +   LF ++   +V P+  TF  +L AC    +  + VE  ++     G+        
Sbjct: 167 IGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCN 226

Query: 532 CMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGETRLARIAAEKF 585
            ++DLY R G +  A  +   + +K  S   + + G  +   E    R+  + +
Sbjct: 227 PLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 280


>gb|AAF03474.1| hypothetical protein [Arabidopsis thaliana]
           gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis
           thaliana] gi|28393735|gb|AAO42278.1| unknown protein
           [Arabidopsis thaliana] gi|15228590|ref|NP_187008.1|
           pentatricopeptide (PPR) repeat-containing protein
           [Arabidopsis thaliana]
          Length = 882

 Score =  406 bits (1044), Expect = e-111
 Identities = 245/733 (33%), Positives = 385/733 (52%), Gaps = 37/733 (5%)

Query: 42  IRALSLQGNLEEALSLLYTHDKHILTHSSLSLQTYASLFHACAKNKCLQQGMALHNYILH 101
           I   S  G  EEAL + +      +   S    T +S+  A      ++QG  LH + L 
Sbjct: 179 ISGYSSHGYYEEALEIYHELKNSWIVPDSF---TVSSVLPAFGNLLVVKQGQGLHGFALK 235

Query: 102 KDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQMPRRNIVSWTALISGYAQCGLIRECF 161
               + + + + N LV MY K      AR VFD+M  R+ VS+  +I GY +  ++ E  
Sbjct: 236 SG--VNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESV 293

Query: 162 YLFSGLLAHYRPNEFAFASLLSACEE-HDIKCGMQVHAVALKISLDASVYVANALITMYS 220
            +F   L  ++P+    +S+L AC    D+     ++   LK        V N LI +Y+
Sbjct: 294 RMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYA 353

Query: 221 KCSGGFHGGYDPTGD--DAWTMFKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCS 278
           KC           GD   A  +F SME ++ +SWNS+I+G+   G   +A++LF  M   
Sbjct: 354 KC-----------GDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIM 402

Query: 279 GIGFDRATLLSVFSSLNECSAFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYAN 338
               D  T L + S     +        L+    LH    K+G+  ++ V  AL+  YA 
Sbjct: 403 EEQADHITYLMLISVSTRLA-------DLKFGKGLHSNGIKSGICIDLSVSNALIDMYAK 455

Query: 339 LGGQISDCYRLFLDTSGKQDIVSWTAIITVLAD-QDPEQAFLLFCQLHRENFVPDWHTFS 397
            G ++ D  ++F  + G  D V+W  +I+      D      +  Q+ +   VPD  TF 
Sbjct: 456 CG-EVGDSLKIF-SSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFL 513

Query: 398 IALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCH 457
           + L  CA    ++    +H  +++ G++ +  + NALI  Y++ G L  S +VF+ M   
Sbjct: 514 VTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR 573

Query: 458 DLVSWNSMLKSYALHGKAKDALELF---KKLDVHPDSTTFVALLSACSHAGLVEEGVEIF 514
           D+V+W  M+ +Y ++G+ + ALE F   +K  + PDS  F+A++ ACSH+GLV+EG+  F
Sbjct: 574 DVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACF 633

Query: 515 NSMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGE 574
             M  ++ I P ++HYAC+VDL  R  KIS+AE+ I  MP+KPD+ IW+S+L +CR  G+
Sbjct: 634 EKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGD 693

Query: 575 TRLARIAAEKFKELDPKNSLGYVQMSNIYSSEGSFIEAGLIRKEMRDSRVKKQPGLSWVE 634
              A   + +  EL+P +    +  SN Y++   + +  LIRK ++D  + K PG SW+E
Sbjct: 694 METAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIE 753

Query: 635 VGKQVHEFTSGGHHHPHKEAIQSRLEILIGQLKEMGYVPEITLALYDTEVEHKEDQLF-H 693
           VGK VH F+SG    P  EAI   LEIL   + + GY+P+      + E E ++ +L   
Sbjct: 754 VGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICG 813

Query: 694 HSEKMALVFAIMNEGNLPCGGNVIKIMKNIRICADCHNFMKLASNLFQKEIVVRDSNRFH 753
           HSE++A+ F ++N       G  +++MKN+R+C DCH   KL S +  +EI+VRD+NRFH
Sbjct: 814 HSERLAIAFGLLNTE----PGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFH 869

Query: 754 HFKNATCSCNDYW 766
            FK+ TCSC D W
Sbjct: 870 LFKDGTCSCKDRW 882



 Score =  183 bits (464), Expect = 2e-44
 Identities = 166/596 (27%), Positives = 274/596 (45%), Gaps = 38/596 (6%)

Query: 42  IRALSLQGNLEEALSLLYTHDKHILTHSSLSLQTYASLFHACAKNKCLQQGMALHNYILH 101
           IRA S  G   EAL     + K   +  S    T+ S+  ACA     + G  ++  IL 
Sbjct: 78  IRAFSKNGLFPEALEF---YGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL- 133

Query: 102 KDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQMPRRNIVSWTALISGYAQCGLIRECF 161
            D   ++DLF+ N LV+MYS+ G L  AR VFD+MP R++VSW +LISGY+  G   E  
Sbjct: 134 -DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192

Query: 162 YLFSGLLAHY-RPNEFAFASLLSACEE-HDIKCGMQVHAVALKISLDASVYVANALITMY 219
            ++  L   +  P+ F  +S+L A      +K G  +H  ALK  +++ V V N L+ MY
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMY 252

Query: 220 SKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSG 279
            K          PT  DA  +F  M+ R+ +S+N+MI G+    + ++++R    M+   
Sbjct: 253 LKFR-------RPT--DARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVR----MFLEN 299

Query: 280 IGFDRATLLSVFSSLNECSAFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANL 339
           +   +  LL+V S L  C    +L++       ++    K G + E  V   L+  YA  
Sbjct: 300 LDQFKPDLLTVSSVLRACGHLRDLSL----AKYIYNYMLKAGFVLESTVRNILIDVYAKC 355

Query: 340 GGQISDCYRLFLDTSGKQDIVSWTAIIT-VLADQDPEQAFLLFCQLHRENFVPDWHTFSI 398
           G  I+   R   ++   +D VSW +II+  +   D  +A  LF  +       D  T+ +
Sbjct: 356 GDMIT--ARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLM 413

Query: 399 ALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHD 458
            +         +    +HS  IK G   D  +SNALI  YA+ G +  S ++F  M   D
Sbjct: 414 LISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGD 473

Query: 459 LVSWNSMLKSYALHGKAKDALEL---FKKLDVHPDSTTFVALLSACSHAGLVEEGVEIFN 515
            V+WN+++ +    G     L++    +K +V PD  TF+  L  C+       G EI  
Sbjct: 474 TVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHC 533

Query: 516 SMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGET 575
            +    G   +L     ++++Y + G +  +  +   M  + D V W+ ++ +   +GE 
Sbjct: 534 CLL-RFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR-DVVTWTGMIYAYGMYGE- 590

Query: 576 RLARIAAEKFKELDPKNSL--GYVQMSNIYS-SEGSFIEAGLIRKEMRDSRVKKQP 628
                A E F +++    +    V ++ IY+ S    ++ GL   E   +  K  P
Sbjct: 591 --GEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDP 644



 Score =  165 bits (417), Expect = 6e-39
 Identities = 127/471 (26%), Positives = 233/471 (48%), Gaps = 28/471 (5%)

Query: 111 FLTNHLVNMYSKCGHLEYARYVFDQM-PRRNIVSWTALISGYAQCGLIRECFYLFSGLL- 168
           F +  L++ YS       +  VF ++ P +N+  W ++I  +++ GL  E    +  L  
Sbjct: 40  FFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRE 99

Query: 169 AHYRPNEFAFASLLSACEE-HDIKCGMQVHAVALKISLDASVYVANALITMYSKCSGGFH 227
           +   P+++ F S++ AC    D + G  V+   L +  ++ ++V NAL+ MYS+      
Sbjct: 100 SKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMG---- 155

Query: 228 GGYDPTGDDAWTMFKSMEFRNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATL 287
                    A  +F  M  R+L+SWNS+I+G+   G  ++A+ ++  +  S I  D  T+
Sbjct: 156 -----LLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTV 210

Query: 288 LSVFSSLNECSAFDELNIPLRNCFVLHCLATKTGLISEVEVVTALVKSYANLGGQISDCY 347
            SV        AF  L + ++    LH  A K+G+ S V V   LV  Y     + +D  
Sbjct: 211 SSVL------PAFGNL-LVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKF-RRPTDAR 262

Query: 348 RLFLDTSGKQDIVSW-TAIITVLADQDPEQAFLLFCQLHRENFVPDWHTFSIALKACAYF 406
           R+F D    +D VS+ T I   L  +  E++  +F + + + F PD  T S  L+AC + 
Sbjct: 263 RVF-DEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHL 320

Query: 407 VTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSML 466
                A  +++ ++K GF  ++ + N LI  YA+ G +  +  VF+ M C D VSWNS++
Sbjct: 321 RDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSII 380

Query: 467 KSYALHGKAKDALELFKK---LDVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGI 523
             Y   G   +A++LFK    ++   D  T++ L+S  +    ++ G  + +S     GI
Sbjct: 381 SGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL-HSNGIKSGI 439

Query: 524 VPQLDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGE 574
              L     ++D+Y + G++ ++  +  +M    D+V W++++ +C + G+
Sbjct: 440 CIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACVRFGD 489



 Score =  112 bits (281), Expect = 3e-23
 Identities = 97/384 (25%), Positives = 180/384 (46%), Gaps = 24/384 (6%)

Query: 195 QVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSME-FRNLISWN 253
           ++HA+ + + LD+S + +  LI  YS          +P    + ++F+ +   +N+  WN
Sbjct: 25  RIHALVISLGLDSSDFFSGKLIDKYSHFR-------EPA--SSLSVFRRVSPAKNVYLWN 75

Query: 254 SMIAGFQFRGLGDKAIRLFAHMYCSGIGFDRATLLSVFSSLNECSAFDELNIPLRNCFVL 313
           S+I  F   GL  +A+  +  +  S +  D+ T  SV   +  C+   +  +      ++
Sbjct: 76  SIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSV---IKACAGLFDAEMG----DLV 128

Query: 314 HCLATKTGLISEVEVVTALVKSYANLGGQISDCYRLFLDTSGKQDIVSWTAIITVLADQD 373
           +      G  S++ V  ALV  Y+ +G  +    R   D    +D+VSW ++I+  +   
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMG--LLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186

Query: 374 -PEQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSN 432
             E+A  ++ +L     VPD  T S  L A    +  +Q   +H   +K G     V++N
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246

Query: 433 ALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKDALELF-KKLD-VHPD 490
            L+  Y +      + +VFDEM   D VS+N+M+  Y      ++++ +F + LD   PD
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPD 306

Query: 491 STTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDLI 550
             T  ++L AC H   +     I+N M    G V +      ++D+Y + G +  A D+ 
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYML-KAGFVLESTVRNILIDVYAKCGDMITARDVF 365

Query: 551 HTMPMKPDSVIWSSLLGSCRKHGE 574
           ++M  K D+V W+S++    + G+
Sbjct: 366 NSMECK-DTVSWNSIISGYIQSGD 388


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.323    0.136    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,265,751,953
Number of Sequences: 2540612
Number of extensions: 51641809
Number of successful extensions: 125077
Number of sequences better than 10.0: 1101
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 411
Number of HSP's that attempted gapping in prelim test: 106360
Number of HSP's gapped (non-prelim): 5193
length of query: 766
length of database: 863,360,394
effective HSP length: 136
effective length of query: 630
effective length of database: 517,837,162
effective search space: 326237412060
effective search space used: 326237412060
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 79 (35.0 bits)


Lotus: description of TM0588c.4