BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0588b.2
(157 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_680709.1| self-incompatibility protein-related [Arabidops... 107 1e-22
ref|NP_188322.1| self-incompatibility protein-related [Arabidops... 103 1e-21
dbj|BAA94986.1| unnamed protein product [Arabidopsis thaliana] g... 95 5e-19
gb|AAM67071.1| S1 self-incompatibility protein, putative [Arabid... 95 7e-19
dbj|BAB10024.1| unnamed protein product [Arabidopsis thaliana] g... 88 6e-17
ref|NP_563713.1| self-incompatibility protein-related [Arabidops... 87 1e-16
dbj|BAB10025.1| unnamed protein product [Arabidopsis thaliana] g... 87 2e-16
gb|AAM64299.1| unknown [Arabidopsis thaliana] 86 4e-16
ref|NP_973917.1| Expressed protein [Arabidopsis thaliana] gi|483... 65 8e-10
ref|NP_680739.1| self-incompatibility protein-related [Arabidops... 64 1e-09
dbj|BAD93851.1| hypothetical protein [Arabidopsis thaliana] gi|5... 64 2e-09
dbj|BAC42658.1| unknown protein [Arabidopsis thaliana] gi|283729... 64 2e-09
pir||E86394 protein T24P13.18 [imported] - Arabidopsis thaliana ... 64 2e-09
dbj|BAB10808.1| unnamed protein product [Arabidopsis thaliana] g... 60 2e-08
emb|CAA06688.1| self-incompatibility [Papaver rhoeas] 60 2e-08
gb|AAM65803.1| unknown [Arabidopsis thaliana] gi|18396057|ref|NP... 59 4e-08
dbj|BAB10807.1| unnamed protein product [Arabidopsis thaliana] g... 57 2e-07
emb|CAA60579.1| S3 self-incompatibility protein [Papaver rhoeas]... 54 1e-06
emb|CAA06689.1| self-incompatibility [Papaver nudicaule] 54 2e-06
emb|CAC14431.1| hypothetical protein [Brassica napus] 53 3e-06
>ref|NP_680709.1| self-incompatibility protein-related [Arabidopsis thaliana]
Length = 161
Score = 107 bits (267), Expect = 1e-22
Identities = 60/134 (44%), Positives = 79/134 (58%), Gaps = 16/134 (11%)
Query: 22 DTGVTFSIFPP-KVTVEIINDLPQPPSTIPLTFHCKSKDDDLGIHTLNHGEVFSFHFKPS 80
D T S+FP K TVEI NDL + + L +HCKSKDDDLG TL GE +SF F
Sbjct: 35 DPSSTNSVFPTSKRTVEINNDLG---NQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQ 91
Query: 81 IIRFSSTLFFCSFTWPDKTPSRHYFDVYDQDRDS-----CKF--CSWKMSKTGGCMYEEK 133
F TL+FCSF+WP+++ H FD+Y RDS C+ C WK+ + G C + ++
Sbjct: 92 F--FGRTLYFCSFSWPNES---HSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDE 146
Query: 134 TGRHDICVPWNNEL 147
T + D+C PWN L
Sbjct: 147 TKQFDLCYPWNKSL 160
>ref|NP_188322.1| self-incompatibility protein-related [Arabidopsis thaliana]
Length = 140
Score = 103 bits (258), Expect = 1e-21
Identities = 50/121 (41%), Positives = 69/121 (56%), Gaps = 14/121 (11%)
Query: 32 PKVTVEIINDLPQPPSTIPLTFHCKSKDDDLGIHTLNHGEVFSFHFKPSIIRFSSTLFFC 91
P+ TV I NDL +PL +HCKSK+DDLG + +SF F+PS+ F TLFFC
Sbjct: 26 PRTTVVIYNDLG---GHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSV--FGGTLFFC 80
Query: 92 SFTWPDKTPSRHYFDVYDQDRD------SCKFCSWKMSKTGGCMYEEKTGRHDICVPWNN 145
F W + H+FD+Y Q RD C+ C WK+ K G C + + D+C+PWN+
Sbjct: 81 GFIWDKEL---HWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLNKNSNMFDVCLPWNS 137
Query: 146 E 146
+
Sbjct: 138 Q 138
>dbj|BAA94986.1| unnamed protein product [Arabidopsis thaliana]
gi|15228959|ref|NP_188333.1| self-incompatibility
protein-related [Arabidopsis thaliana]
Length = 134
Score = 95.1 bits (235), Expect = 5e-19
Identities = 54/142 (38%), Positives = 74/142 (52%), Gaps = 21/142 (14%)
Query: 9 LLLFMTILFALRFDTGVTFSIFPPKVTVEIINDLPQPPSTIPLTFHCKSKDDDLGIHTLN 68
LL F+ ++F + + S+ I NDL +PL HCKS++DDLG +L
Sbjct: 8 LLFFVMVMFMSAIMSRASTSVV-------IYNDLG---GGLPLRHHCKSREDDLGYQSLA 57
Query: 69 HGEVFSFHFKPSIIRFSSTLFFCSFTWPDKTPSRHYFDVYDQDRD------SCKFCSWKM 122
G +SF F P I F TLF+C F+W ++ H FD+Y Q RD CK C WK+
Sbjct: 58 PGRSWSFGFTPDI--FGRTLFYCRFSWGAES---HIFDIYKQSRDKEFQEFGCKKCEWKI 112
Query: 123 SKTGGCMYEEKTGRHDICVPWN 144
K G C + +KTG D C W+
Sbjct: 113 RKNGPCKFYKKTGMFDHCYSWD 134
>gb|AAM67071.1| S1 self-incompatibility protein, putative [Arabidopsis thaliana]
Length = 114
Score = 94.7 bits (234), Expect = 7e-19
Identities = 50/116 (43%), Positives = 65/116 (55%), Gaps = 14/116 (12%)
Query: 35 TVEIINDLPQPPSTIPLTFHCKSKDDDLGIHTLNHGEVFSFHFKPSIIRFSSTLFFCSFT 94
+V I NDL +PL HCKS++DDLG +L G +SF F P I F TLF+C F+
Sbjct: 7 SVVIYNDLG---GGLPLRHHCKSREDDLGYQSLAPGRSWSFGFTPDI--FGRTLFYCRFS 61
Query: 95 WPDKTPSRHYFDVYDQDRD------SCKFCSWKMSKTGGCMYEEKTGRHDICVPWN 144
W ++ H FD+Y Q RD CK C WK+ K G C + +KTG D C W+
Sbjct: 62 WGAES---HIFDIYKQSRDKEFQEFGCKKCEWKIRKNGPCKFYKKTGMFDHCYSWD 114
>dbj|BAB10024.1| unnamed protein product [Arabidopsis thaliana]
gi|67633800|gb|AAY78824.1| self-incompatibility
protein-related [Arabidopsis thaliana]
gi|15239857|ref|NP_196767.1| self-incompatibility
protein-related [Arabidopsis thaliana]
Length = 150
Score = 88.2 bits (217), Expect = 6e-17
Identities = 45/105 (42%), Positives = 58/105 (54%), Gaps = 11/105 (10%)
Query: 49 IPLTFHCKSKDDDLGIHTLNHGEVFSFHFKPSIIRFSSTLFFCSFTWPDKTPSRHYFDVY 108
+ L HCKS DDDLG+ L +SF F+ SI+ +TLF+C FTWP ++ FD+Y
Sbjct: 49 LTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIV--GTTLFYCHFTWPGQSKR---FDIY 103
Query: 109 DQDRD------SCKFCSWKMSKTGGCMYEEKTGRHDICVPWNNEL 147
D DRD SC C W +S G CM+ E +IC WN L
Sbjct: 104 DDDRDGVRSHISCINCIWDISIQGPCMFSESDHAFNICYDWNGNL 148
>ref|NP_563713.1| self-incompatibility protein-related [Arabidopsis thaliana]
gi|2494117|gb|AAB80626.1| Contains similarity to Papaver
S3 self-incompatibility protein (gb|X87100).
[Arabidopsis thaliana] gi|25354967|pir||C86179
hypothetical protein [imported] - Arabidopsis thaliana
Length = 128
Score = 87.0 bits (214), Expect = 1e-16
Identities = 55/141 (39%), Positives = 75/141 (53%), Gaps = 21/141 (14%)
Query: 7 VSLLLFMTILFALRFDTGVTFSIFPP--KVTVEIINDLPQPPSTIPLTFHCKSKDDDLGI 64
VS++ F F L F +G + PP + TV + +L P PLT HCKSK DDLGI
Sbjct: 4 VSIVCFF---FFLLFGSG--YGGLPPFWRATVVTMTNLIGGP---PLTIHCKSKQDDLGI 55
Query: 65 HTLNHGEVFSFHFKPSIIRFSSTLFFCSFTWPDKTPSRHYFDVYDQDRDS--CKFCSWKM 122
H + + + F F+P++ + STLFFCSF W + S FD+YD RD C C W++
Sbjct: 56 HVVPFKQEYHFKFQPNL--WKSTLFFCSFQWDSQFKS---FDIYDAQRDQGICDDCQWEI 110
Query: 123 SKTGGCMYEEKTGRHDICVPW 143
G C + G+ C PW
Sbjct: 111 KPDGPC----RLGKKAKCFPW 127
>dbj|BAB10025.1| unnamed protein product [Arabidopsis thaliana]
gi|15239858|ref|NP_196768.1| self-incompatibility
protein-related [Arabidopsis thaliana]
Length = 149
Score = 86.7 bits (213), Expect = 2e-16
Identities = 43/100 (43%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 51 LTFHCKSKDDDLGIHTLNHGEVFSFHFKPSIIRFSSTLFFCSFTWPDKTPSRHYFDVYDQ 110
L HCKS DDDLG+ L +SF F+PSI+ TLFFC FTWP ++ +F++YD
Sbjct: 49 LKLHCKSADDDLGLKILAPNGSWSFKFRPSIVP-GVTLFFCHFTWPGQS---KWFNIYDD 104
Query: 111 DRDS------CKFCSWKMSKTGGCMYEEKTGRHDICVPWN 144
DRD C +C W + K G C + E +IC WN
Sbjct: 105 DRDGVRMGIPCIYCIWDIGKYGPCRFSEIDDAFNICYDWN 144
>gb|AAM64299.1| unknown [Arabidopsis thaliana]
Length = 128
Score = 85.5 bits (210), Expect = 4e-16
Identities = 54/141 (38%), Positives = 74/141 (52%), Gaps = 21/141 (14%)
Query: 7 VSLLLFMTILFALRFDTGVTFSIFPP--KVTVEIINDLPQPPSTIPLTFHCKSKDDDLGI 64
VS++ F F L F +G + PP + TV + +L P PLT HCKSK DDLGI
Sbjct: 4 VSIVCFF---FFLLFGSG--YGGLPPFWRATVVTMTNLIGGP---PLTIHCKSKQDDLGI 55
Query: 65 HTLNHGEVFSFHFKPSIIRFSSTLFFCSFTWPDKTPSRHYFDVYDQDRDS--CKFCSWKM 122
H + + + F F+P++ + ST FFCSF W + S FD+YD RD C C W++
Sbjct: 56 HVVPFKQEYHFKFQPNL--WKSTFFFCSFQWDSQFKS---FDIYDAQRDQGICDDCQWEI 110
Query: 123 SKTGGCMYEEKTGRHDICVPW 143
G C + G+ C PW
Sbjct: 111 KPDGPC----RLGKKAKCFPW 127
>ref|NP_973917.1| Expressed protein [Arabidopsis thaliana] gi|48310259|gb|AAT41785.1|
At1g26798 [Arabidopsis thaliana]
Length = 151
Score = 64.7 bits (156), Expect = 8e-10
Identities = 44/154 (28%), Positives = 73/154 (46%), Gaps = 23/154 (14%)
Query: 5 KMVSLLLFMTILF--ALRFDTGVTFSI---FPPKVTVEIINDLPQPPSTIPLTFHCKSKD 59
+ +S+L+ ++F +L F+ + + F PK + IIN L L HC++K
Sbjct: 8 QFISVLITTLVIFKTSLAFENYTSVDVDLPFAPKHVI-IINTLNPHER---LVVHCRNKG 63
Query: 60 DDLGIHTLNHGEVFSFHFKPSIIRFSSTLFFCSFTWPDKTPSRHYFDVYDQDRDS----- 114
DLG+H L E F F+ ++ R +T + C+F+WP + FD++ DRD
Sbjct: 64 KDLGVHALEPQEQIDFRFRVNLRR--TTTYTCTFSWPGNAKT---FDIFRVDRDDNSKST 118
Query: 115 ---CKFCSWKMSKTGGCMYEEKTGRHDICVPWNN 145
C+ C W + +TG C + G C W +
Sbjct: 119 CGICRECIWYICETGPCR-ARRDGGAPFCFSWTS 151
>ref|NP_680739.1| self-incompatibility protein-related [Arabidopsis thaliana]
Length = 135
Score = 63.9 bits (154), Expect = 1e-09
Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 23/139 (16%)
Query: 12 FMTILFALRFDTGVTFSIFPPKVTVEIINDLPQPPSTIPLTFHCKSKDDDLGIHTLNHGE 71
FM LF + GV V V+IIND+ + L HCKSKD DLG +L +
Sbjct: 15 FMVFLFGGLCEAGVV-------VNVDIINDIGP---NVQLGLHCKSKDKDLGPQSLAPQQ 64
Query: 72 VFSFHFKPSIIRFSSTLFFCSFTWPDKTPSRHYFD--VYDQDRDSCKF--CSWKMSKTGG 127
+ F+ ++ + TLFFC F W +++ +FD V +DR++C C W + +G
Sbjct: 65 --HWGFRKTLDFWGVTLFFCHFEWENQS---KWFDILVAGRDRNTCAEHPCVWSIRPSGP 119
Query: 128 CMYEEKTGRHDICVPWNNE 146
C K + C PWN++
Sbjct: 120 CRLTGK----EKCFPWNDQ 134
>dbj|BAD93851.1| hypothetical protein [Arabidopsis thaliana]
gi|51972094|gb|AAU15151.1| At1g26799 [Arabidopsis
thaliana] gi|50897204|gb|AAT85741.1| At1g26799
[Arabidopsis thaliana] gi|42571655|ref|NP_973918.1|
expressed protein [Arabidopsis thaliana]
Length = 151
Score = 63.5 bits (153), Expect = 2e-09
Identities = 42/124 (33%), Positives = 60/124 (47%), Gaps = 18/124 (14%)
Query: 29 IFPPKVTVEIINDLPQPPSTIPLTFHCKSKDDDLGIHTLNHGEVFSFHFKPSIIRFSSTL 88
+F PK V I N L S L HC +K+ DLGI L G F F F+ ++ + +T
Sbjct: 37 LFSPKHVV-IYNTLT---SRATLVVHCVNKEKDLGIQKLPIGASFDFRFRVNLRK--TTT 90
Query: 89 FFCSFTWPDKTPSRHYFDVYDQDRDS--------CKFCSWKMSKTGGCMYEEKTGRHDIC 140
+ C+F WP S FD++ DRD C+ C W + + C E++ G H IC
Sbjct: 91 YNCTFEWPG---SIEKFDIFRADRDDNETSPIGICRECIWYIYEPAPCR-EKRDGGHSIC 146
Query: 141 VPWN 144
W+
Sbjct: 147 FTWD 150
>dbj|BAC42658.1| unknown protein [Arabidopsis thaliana] gi|28372954|gb|AAO39959.1|
At1g26797 [Arabidopsis thaliana]
gi|30689650|ref|NP_849709.1| self-incompatibility
protein-related [Arabidopsis thaliana]
Length = 140
Score = 63.5 bits (153), Expect = 2e-09
Identities = 43/145 (29%), Positives = 67/145 (45%), Gaps = 18/145 (12%)
Query: 9 LLLFMTILFALRFDTGVTFSIFPPKVTVEIINDLPQPPSTIPLTFHCKSKDDDLGIHTLN 68
L++F T L F + F PK + IIN L L HC++K +DLG+H +
Sbjct: 6 LVIFKTSLAFENFSSVDGNFPFSPKHVI-IINTLHPHGK---LYVHCRNKGEDLGLHKIE 61
Query: 69 HGEVFSFHFKPSIIRFSSTLFFCSFTWPDKTPSRHYFDVYDQDRDS--------CKFCSW 120
+ E F F+ ++ R +T + C F+WP + FD++ DRD C+ C W
Sbjct: 62 YREQIDFRFRVNLRR--TTTYTCKFSWPGNEKT---FDIFRADRDDSSKSTSGICRECIW 116
Query: 121 KMSKTGGCMYEEKTGRHDICVPWNN 145
+ +TG C + G C W +
Sbjct: 117 YICETGPCR-ARRDGGDPFCFSWTS 140
>pir||E86394 protein T24P13.18 [imported] - Arabidopsis thaliana
gi|9295727|gb|AAF87033.1| T24P13.18 [Arabidopsis
thaliana]
Length = 506
Score = 63.5 bits (153), Expect = 2e-09
Identities = 42/124 (33%), Positives = 60/124 (47%), Gaps = 18/124 (14%)
Query: 29 IFPPKVTVEIINDLPQPPSTIPLTFHCKSKDDDLGIHTLNHGEVFSFHFKPSIIRFSSTL 88
+F PK V I N L S L HC +K+ DLGI L G F F F+ ++ + +T
Sbjct: 392 LFSPKHVV-IYNTLT---SRATLVVHCVNKEKDLGIQKLPIGASFDFRFRVNLRK--TTT 445
Query: 89 FFCSFTWPDKTPSRHYFDVYDQDRDS--------CKFCSWKMSKTGGCMYEEKTGRHDIC 140
+ C+F WP S FD++ DRD C+ C W + + C E++ G H IC
Sbjct: 446 YNCTFEWPG---SIEKFDIFRADRDDNETSPIGICRECIWYIYEPAPCR-EKRDGGHSIC 501
Query: 141 VPWN 144
W+
Sbjct: 502 FTWD 505
Score = 53.9 bits (128), Expect = 1e-06
Identities = 32/85 (37%), Positives = 48/85 (55%), Gaps = 9/85 (10%)
Query: 29 IFPPKVTVEIINDLPQPPSTIPLTFHCKSKDDDLGIHTLNHGEVFSFHFKPSIIRFSSTL 88
+F PK + IIN L + L HC++K DDLG+ +L H F F F+ ++ + +T
Sbjct: 131 LFSPKHVI-IINKLV---TLATLIVHCRNKGDDLGVISLQHLARFHFRFRVNLRK--TTK 184
Query: 89 FFCSFTWPDKTPSRHYFDVYDQDRD 113
+ CSF WP T + FD++ DRD
Sbjct: 185 YTCSFEWPGNTAT---FDIFRADRD 206
Score = 51.6 bits (122), Expect = 7e-06
Identities = 27/80 (33%), Positives = 42/80 (51%), Gaps = 13/80 (16%)
Query: 51 LTFHCKSKDDDLGIHTLNHGEVFSFHFKPSIIRFSSTLFFCSFTWPDKTPSRHYFDVYDQ 110
L HC +K +DLG+ LN + F F F+ ++ + +T + CSF WP T + FD++
Sbjct: 55 LIVHCTNKGEDLGVIRLNPLDRFDFRFRVNLRK--TTTYTCSFEWPGNTAT---FDIFRA 109
Query: 111 DRDS--------CKFCSWKM 122
DRD C C W++
Sbjct: 110 DRDDNPSGKYGVCSECIWRV 129
Score = 51.2 bits (121), Expect = 9e-06
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 9 LLLFMTILFALRFDTGVTFSIFPPKVTVEIINDLPQPPSTIPLTFHCKSKDDDLGIHTLN 68
L++F T L F + F PK + IIN L L HC++K +DLG+H +
Sbjct: 212 LVIFKTSLAFENFSSVDGNFPFSPKHVI-IINTLHPHGK---LYVHCRNKGEDLGLHKIE 267
Query: 69 HGEVFSFHFKPSIIRFSSTLFFCSFTWPDKTPSRHYFDVYDQDRD 113
+ E F F+ ++ R +T + C F+WP + FD++ DRD
Sbjct: 268 YREQIDFRFRVNLRR--TTTYTCKFSWPGNEKT---FDIFRADRD 307
Score = 32.3 bits (72), Expect = 4.2
Identities = 20/51 (39%), Positives = 25/51 (48%), Gaps = 4/51 (7%)
Query: 30 FPPKVTVEIINDLPQPPSTIPLTFHCKSKDDDLGIHTLNHGEVFSFHFKPS 80
F PK + IIN L L HC++K DLG+H L E F F+ S
Sbjct: 333 FAPKHVI-IINTLNPHER---LVVHCRNKGKDLGVHALEPQEQIDFRFRLS 379
>dbj|BAB10808.1| unnamed protein product [Arabidopsis thaliana]
gi|15239324|ref|NP_196222.1| self-incompatibility
protein-related [Arabidopsis thaliana]
Length = 150
Score = 59.7 bits (143), Expect = 2e-08
Identities = 41/115 (35%), Positives = 57/115 (48%), Gaps = 13/115 (11%)
Query: 33 KVTVEIINDLPQPPSTIPLTFHCKSKDDDLGIHTLNHGEVFSFHFKPSIIRFSSTLFFCS 92
+VT++ ND L HCKS+DDDLG H L GE+F + F + R+ STL FC
Sbjct: 47 RVTIQNYNDYL-------LAIHCKSRDDDLGFHILAKGELFGWKFHVN-FRY-STLCFCG 97
Query: 93 FTWPDKTPSRHYFDVYDQDRD--SCKFCSWKMSKTGGCMYEEKTGRHDICVPWNN 145
F+ + ++ F +Y RD C C+WK K G Y + R + W N
Sbjct: 98 FS--QRQINKGVFIIYVASRDFYRCANCTWKAEKDGFHGYGDIPTRGYLFYNWLN 150
>emb|CAA06688.1| self-incompatibility [Papaver rhoeas]
Length = 132
Score = 59.7 bits (143), Expect = 2e-08
Identities = 42/128 (32%), Positives = 63/128 (48%), Gaps = 15/128 (11%)
Query: 13 MTILFALRFDTGVTF--SIFPPKVTVEIINDLPQPPSTIPLTFHCKSKDDDLGIHTLNHG 70
M +L+A+ F + +T S F P + V I+N S + HC+SKDDDLG H ++ G
Sbjct: 1 MKLLYAILFLSFLTLASSRFLPVIEVRIMNKRGNGHS---IGIHCRSKDDDLGYHRISDG 57
Query: 71 EVFSFHFKPSIIRFSSTLFFCSFTWPDKTPSRHY-FDVYDQDRDS----CKFCSWKMSKT 125
+ F F+ + F +T F C W + RH+ FD Y RD C WK +
Sbjct: 58 QQVHFSFRENF--FHTTTFNCDIEWDSR---RHFNFDSYRAQRDDHGRCTTECLWKTTDE 112
Query: 126 GGCMYEEK 133
G Y+++
Sbjct: 113 GLYGYDQE 120
>gb|AAM65803.1| unknown [Arabidopsis thaliana] gi|18396057|ref|NP_564262.1|
self-incompatibility protein-related [Arabidopsis
thaliana]
Length = 151
Score = 58.9 bits (141), Expect = 4e-08
Identities = 32/101 (31%), Positives = 49/101 (47%), Gaps = 14/101 (13%)
Query: 51 LTFHCKSKDDDLGIHTLNHGEVFSFHFKPSIIRFSSTLFFCSFTWPDKTPSRHYFDVYDQ 110
L HC +K +DLG+ LN + F F F+ ++ + +T + CSF WP T + FD++
Sbjct: 55 LIVHCTNKGEDLGVIRLNPLDRFDFRFRVNLRK--TTTYTCSFEWPGNTAT---FDIFRA 109
Query: 111 DRDS--------CKFCSWKMSKTGGCMYEEKTGRHDICVPW 143
DRD C C W + + C + + G C PW
Sbjct: 110 DRDDNPSGKYGVCSECIWSIYEPAPCR-DRRDGGQPQCFPW 149
>dbj|BAB10807.1| unnamed protein product [Arabidopsis thaliana]
gi|67633786|gb|AAY78817.1| self-incompatibility
protein-related [Arabidopsis thaliana]
gi|15239323|ref|NP_196221.1| self-incompatibility
protein-related [Arabidopsis thaliana]
Length = 151
Score = 56.6 bits (135), Expect = 2e-07
Identities = 37/118 (31%), Positives = 59/118 (49%), Gaps = 12/118 (10%)
Query: 9 LLLFMTILFALRFDTGVTFSIFPPKVTVEIINDLPQPPSTIPLTFHCKSKDDDLGIHTLN 68
+++F+T + D G F I P + + N+ + L HCKSKDDDLG H
Sbjct: 23 VMIFVTCYETFQQD-GEPFPIRGPLTRITVKNN-----NDYLLGIHCKSKDDDLGFHIHK 76
Query: 69 HGEVFSFHFKPSIIRFSSTLFFCSFTWPDKTPSRHYFDVYDQDRD--SCKFCSWKMSK 124
GE++ + F + +STL+FC F+ ++ FD+ +RD C+ C+W K
Sbjct: 77 EGELYGWKFHVNF--QNSTLYFCGFS--QGQDNKGVFDIDRAERDFYRCRNCTWNAKK 130
>emb|CAA60579.1| S3 self-incompatibility protein [Papaver rhoeas]
gi|1107841|emb|CAA60578.1| S3 self-incompatibility
protein [Papaver rhoeas] gi|2148045|pir||S69186
self-incompatibility protein S3 precursor - Papaver
rhoeas cv. Shirley and others
Length = 138
Score = 54.3 bits (129), Expect = 1e-06
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
Query: 7 VSLLLFMTILFALRFDTGVTFSIFPPKVTVEIINDLPQPPSTIPLTFHCKSKDDDLGIHT 66
+ +L + +L + + F+ ++ V I+N S +T HC+S+DDDLG H
Sbjct: 1 MKILCVIVLLTLVSMSNSIGFT----RIQVRIMNRRGNGKS---ITIHCQSEDDDLGTHV 53
Query: 67 LNHGEVFSFHFKPSIIRFSSTLFFCSFTWPDKTPSRHYFDVYDQDRDSCKFCS----WKM 122
++ G+ ++ F+ + + +T F+C W D+ FD Y RD CS WK+
Sbjct: 54 VSDGQEINWSFRENFM--LTTRFYCYLQW-DRKGKHFNFDAYSGKRDDGGRCSTECLWKI 110
Query: 123 SKTGGCMYEEK 133
+ G Y+++
Sbjct: 111 LEGGLWGYDQE 121
>emb|CAA06689.1| self-incompatibility [Papaver nudicaule]
Length = 134
Score = 53.5 bits (127), Expect = 2e-06
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 54 HCKSKDDDLGIHTLNHGEVFSFHFKPSIIRFSSTLFFCSFTWPDKTPSRHYFDVYDQDRD 113
HC+S DDDLG H + G+ +F F+ S + +T F+C W ++ +++FD Y DRD
Sbjct: 42 HCQSGDDDLGNHVVPDGQEVNFSFRESFL--ENTRFWCDVQWSNEV--KYHFDAYWSDRD 97
Query: 114 ----SCKFCSWKMSKTGGCMYEEK 133
C W M + G Y+++
Sbjct: 98 RLGRCLSQCLWTMMEDGLYGYDQE 121
>emb|CAC14431.1| hypothetical protein [Brassica napus]
Length = 151
Score = 52.8 bits (125), Expect = 3e-06
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 29 IFPPKVT---VEIINDLPQPPSTIPLTFHCKSKDDDLGIHTLNHGEVFSFHFKPSIIRFS 85
I PK++ V ++N L + L HCKSK+DDLG H L G+ FS++F +++
Sbjct: 33 IIGPKISEWQVMVVNGLATSET---LFIHCKSKEDDLGEHNLRLGDRFSWNFGENMLH-- 87
Query: 86 STLFFCSFTWPDKTPSRHYFDVYDQDRDSCKFCSWKMSKTGGCMYEEKTGRHDICVPWNN 145
STLF+C + K +V+ D C WK C++ KT + N
Sbjct: 88 STLFWC---YLSKDDGHMNVEVFWDDVILFHRCGWKK-----CVWTAKTDGLYLWNFANG 139
Query: 146 ELNLHKRWELG 156
E L ++WE G
Sbjct: 140 EDLLLEKWEAG 150
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.327 0.141 0.474
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 300,626,327
Number of Sequences: 2540612
Number of extensions: 12806374
Number of successful extensions: 28197
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 28130
Number of HSP's gapped (non-prelim): 46
length of query: 157
length of database: 863,360,394
effective HSP length: 117
effective length of query: 40
effective length of database: 566,108,790
effective search space: 22644351600
effective search space used: 22644351600
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 69 (31.2 bits)
Lotus: description of TM0588b.2