BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0587.5
(191 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB80245.1| putative zinc-finger protein [Arabidopsis thalia... 137 1e-31
ref|XP_465060.1| zinc finger (C2H2 type)-like [Oryza sativa (jap... 119 3e-26
gb|AAY78685.1| zinc finger (C2H2 type) family protein [Arabidops... 114 1e-24
ref|XP_479044.1| hypothetical protein [Oryza sativa (japonica cu... 73 4e-12
ref|XP_467152.1| zinc finger protein-like [Oryza sativa (japonic... 71 1e-11
ref|NP_171706.1| zinc finger (C2H2 type) family protein [Arabido... 70 4e-11
ref|XP_469882.1| zinc finger transcription factor ZF1 [Oryza sat... 67 2e-10
dbj|BAA21920.1| ZPT2-11 [Petunia x hybrida] 67 3e-10
dbj|BAA03902.1| zinc-finger protein WZF1 [Triticum aestivum] gi|... 66 6e-10
gb|AAO46041.1| zinc finger transcription factor ZFP2 [Oryza sati... 65 1e-09
gb|AAP51130.1| C2H2-type zinc finger protein ZFP36 [Oryza sativa... 64 2e-09
ref|XP_468836.1| C2H2-type zinc finger protein ZFP36 [Oryza sati... 64 2e-09
pir||T14409 probable zinc-finger protein ZFP1 - turnip gi|205850... 64 2e-09
pir||T14408 probable zinc-finger protein-1 - turnip gi|2058504|g... 64 3e-09
gb|AAB39638.1| SCOF-1 [Glycine max] gi|7488707|pir||T09602 proba... 63 4e-09
ref|XP_468835.1| putative zinc finger protein [Oryza sativa (jap... 62 8e-09
ref|XP_468767.1| putative zinc finger protein (C2H2-type) [Oryza... 60 4e-08
emb|CAB83312.1| putative protein [Arabidopsis thaliana] gi|15242... 59 5e-08
pir||T52382 zinc finger protein ZPT4-4, C2H2-type [imported] - g... 59 5e-08
dbj|BAA85108.1| Cys2/His2-type zinc finger protein 1 [Arabidopsi... 58 1e-07
>emb|CAB80245.1| putative zinc-finger protein [Arabidopsis thaliana]
gi|3080422|emb|CAA18741.1| putative zinc-finger protein
[Arabidopsis thaliana] gi|15236937|ref|NP_195254.1| zinc
finger (C2H2 type) family protein [Arabidopsis thaliana]
gi|7488432|pir||T06129 zinc finger protein F23E12.160 -
Arabidopsis thaliana
Length = 284
Score = 137 bits (346), Expect = 1e-31
Identities = 86/218 (39%), Positives = 106/218 (48%), Gaps = 65/218 (29%)
Query: 27 CSECGKKFWSEKALHGHMRCHPEREWRGINPPPKFRRPSQP------QPQPPQTTVITQE 80
C+ECG+KFWS KAL GHMRCHPER+WRGINPPP +R P+ Q P + +++E
Sbjct: 79 CTECGRKFWSWKALFGHMRCHPERQWRGINPPPNYRVPTAASSKQLNQILPNWVSFMSEE 138
Query: 81 EHEVAACLLLLANA---------------------------------NAKG----DTCSS 103
+HEVA+CLL+L+N N KG +
Sbjct: 139 DHEVASCLLMLSNGTPSSSSIERFECGGCKKVFGSHQALGGHRASHKNVKGCFAITNVTD 198
Query: 104 SKSEISCSSSHH----------HHKCSICLRVFSSGQALGGHKRRHWEKGGDLIHHHLPP 153
+S SS H HHKC+IC RVFSSGQALGGH R HWEK +
Sbjct: 199 DPMTVSTSSGHDHQGKILTFSGHHKCNICFRVFSSGQALGGHMRCHWEKEEE-------- 250
Query: 154 PAPAPAPVLDLNLPPPESGSDPITVPLDFAALDLSLRL 191
P + LDLN+PP + D T LDL L L
Sbjct: 251 --PMISGALDLNVPP--TIQDLSTSDTSGCCLDLRLGL 284
Score = 33.5 bits (75), Expect = 3.2
Identities = 14/26 (53%), Positives = 19/26 (72%)
Query: 26 QCSECGKKFWSEKALHGHMRCHPERE 51
+C+ C + F S +AL GHMRCH E+E
Sbjct: 223 KCNICFRVFSSGQALGGHMRCHWEKE 248
>ref|XP_465060.1| zinc finger (C2H2 type)-like [Oryza sativa (japonica
cultivar-group)] gi|47847703|dbj|BAD21483.1| zinc finger
(C2H2 type)-like [Oryza sativa (japonica
cultivar-group)]
Length = 263
Score = 119 bits (299), Expect = 3e-26
Identities = 76/194 (39%), Positives = 95/194 (48%), Gaps = 36/194 (18%)
Query: 9 QKHVVPSPSSSPSGKWSQCSECGKKFWSEKALHGHMRCHPEREWRGINPPPKFRRPSQPQ 68
Q V + SSP+G C+ECG++F S KAL GHMRCHPER WRGI PP +
Sbjct: 50 QAMVARAKCSSPTGDAPPCTECGRQFLSWKALFGHMRCHPERHWRGITPPGGGGAGAASS 109
Query: 69 PQPPQTTVITQEEHEVAACLLLLANAN------AKGDTCSSSKSEISCSSSHH------H 116
Q T+ E EVAA LL+L+ A+ KG + + ++ HH
Sbjct: 110 TAASQFTL---REREVAASLLMLSGAHPARSGAGKGKGKKRLLAPAAAAAPHHSPATCAD 166
Query: 117 HKCSICLRVFSSGQALGGHKRRHWE------------------KGGDLIHHHLPPPAPAP 158
HKC++C R F++GQALGGHKR HW PPPAPA
Sbjct: 167 HKCAVCHRGFATGQALGGHKRCHWPDRSCADQAISMLAVSTAGSSSTTTTSASPPPAPAT 226
Query: 159 APV---LDLNLPPP 169
A L+LNLPPP
Sbjct: 227 AATALDLNLNLPPP 240
>gb|AAY78685.1| zinc finger (C2H2 type) family protein [Arabidopsis thaliana]
gi|4584341|gb|AAD25136.1| putative C2H2-type zinc finger
protein [Arabidopsis thaliana] gi|25411784|pir||A84549
probable C2H2-type zinc finger protein [imported] -
Arabidopsis thaliana gi|15227385|ref|NP_179309.1| zinc
finger (C2H2 type) family protein [Arabidopsis thaliana]
Length = 270
Score = 114 bits (285), Expect = 1e-24
Identities = 65/157 (41%), Positives = 87/157 (55%), Gaps = 17/157 (10%)
Query: 14 PSPSSSPSGKWSQ----CSECGKKFWSEKALHGHMRCHPEREWRGINPPPKF-RRPSQPQ 68
P P + P SQ C+ECGK+F S KAL GHMRCHPER+WRGINPP F RR +
Sbjct: 50 PKPVTQPDPDASQIARPCTECGKQFGSLKALFGHMRCHPERQWRGINPPSNFKRRINSNA 109
Query: 69 PQPPQTTVITQEEHEVAACLLLLANANAKGDTCSSSKSEISCSSSHHHHKCSICLRVFSS 128
+ ++EEH +A+CLL++AN GD + S S +C C +VF S
Sbjct: 110 ASSSSSWDPSEEEHNIASCLLMMAN----GDVPTRS------SEVEERFECDGCKKVFGS 159
Query: 129 GQALGGHKRRHWEKGGDLIHHHL--PPPAPAPAPVLD 163
QALGGH+ H + G + ++ PP P P ++D
Sbjct: 160 HQALGGHRATHKDVKGCFANKNITEDPPPPPPQEIVD 196
>ref|XP_479044.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|23495811|dbj|BAC20021.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|22775659|dbj|BAC15513.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 327
Score = 73.2 bits (178), Expect = 4e-12
Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 21/155 (13%)
Query: 27 CSECGKKFWSEKALHGHMRCH-PEREWRGINPPPKFRRPSQPQPQPPQTTVITQE---EH 82
C C K+F S KA+HGHMR H E E ++ PP+ P PQ + P +
Sbjct: 115 CHLCNKEFGSRKAVHGHMRVHHAENEKEPMSLPPQVAAPVHPQARLPTRGASRSGGPYKC 174
Query: 83 EVAACLLLLANANAKG---------DTCSSSKSEISCSSSHHHHKCSICLRVFSSGQALG 133
+ C++ + G D +++ H C++C + + +G ALG
Sbjct: 175 KYEGCIMEYESHQGLGGHVAGHINRDKMATASGSGGAGKPKGKHPCNVCGKEYPTGVALG 234
Query: 134 GHKRRHWEKGGDLIHHHLPP--------PAPAPAP 160
GHKR+H+ K DL PP P PAPAP
Sbjct: 235 GHKRKHYRKDLDLTLSLAPPGQLAAPPTPTPAPAP 269
>ref|XP_467152.1| zinc finger protein-like [Oryza sativa (japonica cultivar-group)]
gi|49388630|dbj|BAD25743.1| zinc finger protein-like
[Oryza sativa (japonica cultivar-group)]
Length = 341
Score = 71.2 bits (173), Expect = 1e-11
Identities = 54/163 (33%), Positives = 64/163 (39%), Gaps = 35/163 (21%)
Query: 14 PSPSSSPSGKWS-QCSECGKKFWSEKALHGHMRCHPEREWRGINPPPKFRRPSQPQPQPP 72
P+P+ P + QC C K F S +AL GH H R RG P P QP PQPP
Sbjct: 186 PAPAPVPEKRTRFQCPACKKVFRSYQALGGHRASHV-RGGRGGCCAPPVAPPPQPHPQPP 244
Query: 73 QTTVITQEEHEVAACLLLLANANAKGDTCSSSKSEISCSSSHHHHKCSICLRVFSSGQAL 132
EH+ E H+C C RVF+SGQAL
Sbjct: 245 LP------EHDAG---------------------EEDMDGKAPPHECPYCYRVFASGQAL 277
Query: 133 GGHKRRHWEKGGDLIHH------HLPPPAPAPAPVLDLNLPPP 169
GGHK+ H H PPP P ++DLN PP
Sbjct: 278 GGHKKSHVCSAAAAAAHAQTPGGGAPPPQPKILGMIDLNFAPP 320
Score = 38.9 bits (89), Expect = 0.076
Identities = 23/59 (38%), Positives = 30/59 (49%), Gaps = 6/59 (10%)
Query: 118 KCSICLRVFSSGQALGGHKRRHWE--KGGDLIHHHLPPPAPAPAPVLDLNLPPPESGSD 174
+C C +VF S QALGGH+ H +GG PP AP P P LP ++G +
Sbjct: 199 QCPACKKVFRSYQALGGHRASHVRGGRGGCCA----PPVAPPPQPHPQPPLPEHDAGEE 253
>ref|NP_171706.1| zinc finger (C2H2 type) family protein [Arabidopsis thaliana]
Length = 324
Score = 69.7 bits (169), Expect = 4e-11
Identities = 52/169 (30%), Positives = 74/169 (43%), Gaps = 25/169 (14%)
Query: 26 QCSECGKKFWSEKALHGHMRCHPEREWRGINPPPKFRRPSQPQPQPPQTTVITQEEHEVA 85
QC C K F S +AL GH H ++ +G F + + + + + E
Sbjct: 151 QCKACKKVFTSHQALGGHRASH--KKVKGC-----FASQDKEEEEEEEYKEDDDDNDE-- 201
Query: 86 ACLLLLANANAKGDTCSSSKSEISCSSSHHHHKCSICLRVFSSGQALGGHKRRHWEKGGD 145
+ + + D S + I+ S+ H +C+IC RVFSSGQALGGHKR HW +
Sbjct: 202 -------DEDEEEDEEDKSTAHIARKRSNAH-ECTICHRVFSSGQALGGHKRCHWLTPSN 253
Query: 146 LI--------HHHLPPPAPAPAPVLDLNLPPPESGSDPITVPLDFAALD 186
+ HH + P P P LDLNL E DP + + D
Sbjct: 254 YLRMTSLHDHHHSVGRPQPLDQPSLDLNLACQEYSVDPTAMSVGMIERD 302
Score = 42.4 bits (98), Expect = 0.007
Identities = 27/94 (28%), Positives = 41/94 (42%), Gaps = 20/94 (21%)
Query: 59 PKFRRPSQPQPQPPQTTVITQEEHEVAACLLLLANA-------------NAKGDTCSSSK 105
P ++R Q + E+ E+A CL+LL+N+ + KG T K
Sbjct: 86 PPWKRERSMSTQHHHLNLSPNEDEELANCLVLLSNSGDAHGGDQHKQHGHGKGKTVKKQK 145
Query: 106 SEISCSSSHHHHKCSICLRVFSSGQALGGHKRRH 139
+ +C C +VF+S QALGGH+ H
Sbjct: 146 TA-------QVFQCKACKKVFTSHQALGGHRASH 172
>ref|XP_469882.1| zinc finger transcription factor ZF1 [Oryza sativa (japonica
cultivar-group)] gi|17027281|gb|AAL34135.1| zinc finger
transcription factor ZF1 [Oryza sativa (japonica
cultivar-group)] gi|12698882|gb|AAK01713.1| zinc finger
transcription factor ZF1 [Oryza sativa]
Length = 269
Score = 67.4 bits (163), Expect = 2e-10
Identities = 48/146 (32%), Positives = 67/146 (45%), Gaps = 30/146 (20%)
Query: 2 RNSHSHTQKHVVPSPSSS----PSGKWSQCSECGKKFWSEKALHGHMRCHPEREWRGINP 57
R H Q P P S+ P+G +CS CGK F S +AL GH H +
Sbjct: 73 RGGHHRVQ---APPPLSASAPPPAGAEFKCSVCGKSFSSYQALGGHKTSHRVK------- 122
Query: 58 PPKFRRPSQPQPQPPQTTVITQEEHEVAACLLLLANANAKGDTCSSSKSEISCSSSHHHH 117
P PP V+ A LL +A + + +SS + S ++ H
Sbjct: 123 ----------LPTPPAAPVLAP-----APVAALLPSAEDR-EPATSSTAASSDGMTNRVH 166
Query: 118 KCSICLRVFSSGQALGGHKRRHWEKG 143
+CSIC + F +GQALGGHKR+H++ G
Sbjct: 167 RCSICQKEFPTGQALGGHKRKHYDGG 192
Score = 46.2 bits (108), Expect = 5e-04
Identities = 31/83 (37%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 80 EEHEVAACLLLLANANAKGDTCSSSKSEISCSSSHHHHKCSICLRVFSSGQALGGHKRRH 139
EE +A CLL+LA S + + KCS+C + FSS QALGGHK H
Sbjct: 60 EEENLALCLLMLARGGHHRVQAPPPLSASAPPPAGAEFKCSVCGKSFSSYQALGGHKTSH 119
Query: 140 WEKGGDLIHHHLPPPAPAPAPVL 162
K P P APVL
Sbjct: 120 RVK----------LPTPPAAPVL 132
>dbj|BAA21920.1| ZPT2-11 [Petunia x hybrida]
Length = 282
Score = 67.0 bits (162), Expect = 3e-10
Identities = 52/172 (30%), Positives = 74/172 (42%), Gaps = 15/172 (8%)
Query: 14 PSPSSSPSGKWSQCSECGKKFWSEKALHGHMRCHPEREWRGINPPPKFRRPSQPQPQPPQ 73
PSPS SP + QC C + F S +AL GH H + + P + + +
Sbjct: 95 PSPSHSPLDVY-QCKTCNRCFPSFQALGGHRASHKKPKL-----PTNLEEKNSKPIEHVE 148
Query: 74 TTVITQEEHEVAACLLLLANANAKGDTCSSSKSEISCSSSHHHHKCSICLRVFSSGQALG 133
+ E+H V L ++N N + +++ + + + H+CSIC F+SGQALG
Sbjct: 149 NCSKSNEDH-VTTLSLQISNNNINNNNSNNNNNNNIIKNKNRVHECSICGAEFTSGQALG 207
Query: 134 GHKRRHWEKGGDL----IHHHLPPPAPAPAP----VLDLNLPPPESGSDPIT 177
GH RRH + H L LDLNLP PE P T
Sbjct: 208 GHMRRHRPLPNSIAIASTSHELESSHEIKNTRNFLSLDLNLPAPEDDHRPET 259
Score = 39.7 bits (91), Expect = 0.045
Identities = 25/76 (32%), Positives = 37/76 (47%), Gaps = 9/76 (11%)
Query: 65 SQPQPQPPQTTVITQEEHEVAACLLLLANA-NAKGDTCSSSKSEISCSSSHHHHKCSICL 123
S P + +EE ++A CL+LLA N + + S S ++ ++C C
Sbjct: 60 SSPSNSGIDILIRNREEEDMANCLILLAQGHNNQKPSPSHSPLDV--------YQCKTCN 111
Query: 124 RVFSSGQALGGHKRRH 139
R F S QALGGH+ H
Sbjct: 112 RCFPSFQALGGHRASH 127
>dbj|BAA03902.1| zinc-finger protein WZF1 [Triticum aestivum]
gi|485814|dbj|BAA03901.1| zinc-finger protein WZF1
[Triticum aestivum] gi|34925590|sp|Q42430|ZFP1_WHEAT
Zinc-finger protein 1 (WZF1)
Length = 261
Score = 65.9 bits (159), Expect = 6e-10
Identities = 45/142 (31%), Positives = 62/142 (42%), Gaps = 24/142 (16%)
Query: 4 SHSHTQKHVVPSPSS--SPSGKWSQCSECGKKFWSEKALHGHMRCHPEREWRGINPPPKF 61
S Q+ P P S +P +CS CGK F S +AL GH H +
Sbjct: 67 SRGGKQRVQAPQPESFAAPVPAEFKCSVCGKSFSSYQALGGHKTSHRVK----------- 115
Query: 62 RRPSQPQPQPPQTTVITQEEHEVAACLLLLANANAKGDTCSSSKSEISCSSSHHHHKCSI 121
QP PP A +L + A T +SS +++ H+CSI
Sbjct: 116 ------QPSPPSDAAAAPLVALPAVAAILPSAEPATSSTAASSDG-----ATNRVHRCSI 164
Query: 122 CLRVFSSGQALGGHKRRHWEKG 143
C + F +GQALGGHKR+H++ G
Sbjct: 165 CQKEFPTGQALGGHKRKHYDGG 186
Score = 45.1 bits (105), Expect = 0.001
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 80 EEHEVAACLLLLANANAKGDTCSSSKSEISCSSSHHHHKCSICLRVFSSGQALGGHKRRH 139
EE +A CLL+L+ + + + E + KCS+C + FSS QALGGHK H
Sbjct: 55 EEENLALCLLMLSRGGKQ--RVQAPQPESFAAPVPAEFKCSVCGKSFSSYQALGGHKTSH 112
Query: 140 WEKGGDLIHHHLPPPAPAPAPVLDL 164
+ PP A AP++ L
Sbjct: 113 ------RVKQPSPPSDAAAAPLVAL 131
>gb|AAO46041.1| zinc finger transcription factor ZFP2 [Oryza sativa (japonica
cultivar-group)]
Length = 250
Score = 64.7 bits (156), Expect = 1e-09
Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 25/130 (19%)
Query: 12 VVPSPSSSPSGKWSQCSECGKKFWSEKALHGHMRCHPEREWRGINPPPKFRRPSQPQPQP 71
V S S++ + +CS CGK F S +AL GH H + PPP P
Sbjct: 78 VAASASAAAAAVEHRCSVCGKAFASYQALGGHKASHRK-------PPP-----------P 119
Query: 72 PQTTVITQEEHEVAACLLLLANANAKGDTCSSSKSEISCSSSHHHHKCSICLRVFSSGQA 131
P ++ +E V +A T SSS S +S H+C++C + F +GQA
Sbjct: 120 PPPAMVDDDEVVVETKPAAIA-------TPSSSASGVSGGGGGRAHECNVCGKAFPTGQA 172
Query: 132 LGGHKRRHWE 141
LGGHKR H++
Sbjct: 173 LGGHKRCHYD 182
Score = 62.4 bits (150), Expect = 6e-09
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 18/104 (17%)
Query: 60 KFRRPSQPQPQPPQTTVITQEEHEVAACLLLLANANAKGDTCSSSKSEISCSSSHHHHKC 119
K +R + +PQ P + EE +A CLL+LA GD ++S S +++ H+C
Sbjct: 42 KRKRSRRRRPQLPPS-----EEEYLALCLLMLARGRRDGDDVAAS---ASAAAAAVEHRC 93
Query: 120 SICLRVFSSGQALGGHKRRHWEKGGDLIHHHLPPPAPAPAPVLD 163
S+C + F+S QALGGHK H PPP P PA V D
Sbjct: 94 SVCGKAFASYQALGGHK----------ASHRKPPPPPPPAMVDD 127
>gb|AAP51130.1| C2H2-type zinc finger protein ZFP36 [Oryza sativa (japonica
cultivar-group)]
Length = 220
Score = 64.3 bits (155), Expect = 2e-09
Identities = 56/165 (33%), Positives = 77/165 (45%), Gaps = 34/165 (20%)
Query: 10 KHVVPSPSSSPSGKWSQCSECGKKFWSEKALHGHMRCHPEREWRGINPPPKFRRPSQPQP 69
K + P+P++ P +C+ CGK F S +AL GH H R+P P
Sbjct: 59 KWLCPAPAA-PEELRFRCTVCGKAFASYQALGGHKSSH--------------RKPPSPG- 102
Query: 70 QPPQTTVITQEEHEVAACLLLLANANAKGDTCSSSKSEISCSSSHHHHKCSICLRVFSSG 129
+ + AA LA+A GD+ S S S + S H+C+IC R F++G
Sbjct: 103 ----------DHYGAAAAAQQLASA---GDSKEDSAS--SAAGSTGPHRCTICRRSFATG 147
Query: 130 QALGGHKRRHWEKGGDLIHHHLPPPAPAPAPV--LDLNLPP-PES 171
QALGGHKR H+ G + + A + V DLNL P PES
Sbjct: 148 QALGGHKRCHYWDGTSVSVSVSASASAASSAVRNFDLNLMPLPES 192
>ref|XP_468836.1| C2H2-type zinc finger protein ZFP36 [Oryza sativa (japonica
cultivar-group)] gi|53370688|gb|AAU89183.1| C2H2 type
zinc finger containing protein [Oryza sativa (japonica
cultivar-group)] gi|40737008|gb|AAR89021.1| C2H2-type
zinc finger protein ZFP36 [Oryza sativa (japonica
cultivar-group)]
Length = 220
Score = 64.3 bits (155), Expect = 2e-09
Identities = 56/165 (33%), Positives = 77/165 (45%), Gaps = 34/165 (20%)
Query: 10 KHVVPSPSSSPSGKWSQCSECGKKFWSEKALHGHMRCHPEREWRGINPPPKFRRPSQPQP 69
K + P+P++ P +C+ CGK F S +AL GH H R+P P
Sbjct: 59 KWLCPAPAA-PEELRFRCTVCGKAFASYQALGGHKSSH--------------RKPPSPG- 102
Query: 70 QPPQTTVITQEEHEVAACLLLLANANAKGDTCSSSKSEISCSSSHHHHKCSICLRVFSSG 129
+ + AA LA+A GD+ S S S + S H+C+IC R F++G
Sbjct: 103 ----------DHYGAAAAAQQLASA---GDSKEDSAS--SAAGSTGPHRCTICRRSFATG 147
Query: 130 QALGGHKRRHWEKGGDLIHHHLPPPAPAPAPV--LDLNLPP-PES 171
QALGGHKR H+ G + + A + V DLNL P PES
Sbjct: 148 QALGGHKRCHYWDGTSVSVSVSASASAASSAVRNFDLNLMPLPES 192
>pir||T14409 probable zinc-finger protein ZFP1 - turnip
gi|2058506|gb|AAB53261.1| zinc-finger protein BcZFP1
[Brassica rapa]
Length = 237
Score = 64.3 bits (155), Expect = 2e-09
Identities = 44/128 (34%), Positives = 63/128 (48%), Gaps = 28/128 (21%)
Query: 16 PSSSPSGKWSQCSECGKKFWSEKALHGHMRCHPEREWRGINPPPKFRRPSQPQPQPPQTT 75
PSSS + +C+ CGK F S +AL GH H R+P+ P
Sbjct: 81 PSSSSDHRGYKCTVCGKSFSSYQALGGHKTSH--------------RKPASNVNVP---- 122
Query: 76 VITQEEHEVAACLLLLANANAKGDTCSSSKSEISCSSSHHHHKCSICLRVFSSGQALGGH 135
I QE+ + ++N+ G + + + + +S S H CSIC + FSSGQALGGH
Sbjct: 123 -INQEQSNNS-------HSNSNGGSVAINGNGVSQSGKIH--TCSICFKSFSSGQALGGH 172
Query: 136 KRRHWEKG 143
KR H++ G
Sbjct: 173 KRCHYDAG 180
Score = 37.7 bits (86), Expect = 0.17
Identities = 22/47 (46%), Positives = 26/47 (54%), Gaps = 2/47 (4%)
Query: 3 NSHSHTQKHVVPSPSS--SPSGKWSQCSECGKKFWSEKALHGHMRCH 47
NSHS++ V + S SGK CS C K F S +AL GH RCH
Sbjct: 130 NSHSNSNGGSVAINGNGVSQSGKIHTCSICFKSFSSGQALGGHKRCH 176
>pir||T14408 probable zinc-finger protein-1 - turnip gi|2058504|gb|AAB53260.1|
zinc-finger protein-1 [Brassica rapa]
Length = 235
Score = 63.5 bits (153), Expect = 3e-09
Identities = 44/130 (33%), Positives = 63/130 (47%), Gaps = 28/130 (21%)
Query: 16 PSSSPSGKWSQCSECGKKFWSEKALHGHMRCHPEREWRGINPPPKFRRPSQPQPQPPQTT 75
PSSS + +C+ CGK F S +AL GH H R+P+ P
Sbjct: 81 PSSSSDHRGYKCTVCGKSFSSYQALGGHKTSH--------------RKPASNVNVP---- 122
Query: 76 VITQEEHEVAACLLLLANANAKGDTCSSSKSEISCSSSHHHHKCSICLRVFSSGQALGGH 135
I QE+ + ++N+ G + + + +S S H CSIC + FSSGQALGGH
Sbjct: 123 -INQEQSNNS-------HSNSNGGSVVINGNGVSQSGKIH--TCSICFKSFSSGQALGGH 172
Query: 136 KRRHWEKGGD 145
KR H++ G +
Sbjct: 173 KRCHYDAGNN 182
Score = 39.3 bits (90), Expect = 0.058
Identities = 22/47 (46%), Positives = 26/47 (54%), Gaps = 2/47 (4%)
Query: 3 NSHSHTQ--KHVVPSPSSSPSGKWSQCSECGKKFWSEKALHGHMRCH 47
NSHS++ V+ S SGK CS C K F S +AL GH RCH
Sbjct: 130 NSHSNSNGGSVVINGNGVSQSGKIHTCSICFKSFSSGQALGGHKRCH 176
>gb|AAB39638.1| SCOF-1 [Glycine max] gi|7488707|pir||T09602 probable zinc finger
protein SCOF-1, cold-inducible - soybean
Length = 240
Score = 63.2 bits (152), Expect = 4e-09
Identities = 46/133 (34%), Positives = 59/133 (43%), Gaps = 40/133 (30%)
Query: 14 PSPSSSPSGKWS-QCSECGKKFWSEKALHGHMRCHPEREWRGINPPPKFRRPSQPQPQPP 72
P P+ PS K S +CS C K F S +AL GH H R+ G + QPP
Sbjct: 73 PQPTPDPSTKLSYKCSVCDKSFPSYQALGGHKASH--RKLAG-----------AAEDQPP 119
Query: 73 QTTVITQEEHEVAACLLLLANANAKGDTCSSSKSEISCSSSHHHHKCSICLRVFSSGQAL 132
TT +SS + S +S H+CSIC + F +GQAL
Sbjct: 120 STT--------------------------TSSAAATSSASGGKAHECSICHKSFPTGQAL 153
Query: 133 GGHKRRHWEKGGD 145
GGHKR H+E G+
Sbjct: 154 GGHKRCHYEGNGN 166
Score = 38.9 bits (89), Expect = 0.076
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 17 SSSPSGKWSQCSECGKKFWSEKALHGHMRCHPEREWRGIN 56
SS+ GK +CS C K F + +AL GH RCH E G N
Sbjct: 130 SSASGGKAHECSICHKSFPTGQALGGHKRCHYEGNGNGNN 169
>ref|XP_468835.1| putative zinc finger protein [Oryza sativa (japonica
cultivar-group)] gi|53370687|gb|AAU89182.1| C2H2 type
zinc finger containing protein [Oryza sativa (japonica
cultivar-group)] gi|40737005|gb|AAR89018.1| putative
zinc finger protein [Oryza sativa (japonica
cultivar-group)]
Length = 200
Score = 62.0 bits (149), Expect = 8e-09
Identities = 48/149 (32%), Positives = 64/149 (42%), Gaps = 34/149 (22%)
Query: 26 QCSECGKKFWSEKALHGHMRCHPEREWRGINPPPKFRRPSQPQPQPPQTTVITQEEHEVA 85
+CS CGK F S +AL GH H + PP P PP +
Sbjct: 49 RCSVCGKAFPSHQALGGHKASHRK--------PPTAALPMHVIDAPPPPSA--------- 91
Query: 86 ACLLLLANANAKGDTCSSSKSEISCSSSHHHHKCSICLRVFSSGQALGGHKRRHWEKGGD 145
DT SSS + + +S H+CS+C R F++GQALGGHKR H+ G
Sbjct: 92 ------------EDTASSSTT--TTTSGGGRHRCSVCHRTFATGQALGGHKRCHYWDGLS 137
Query: 146 LIHHHLPPPAPAPAPV--LDLNLPP-PES 171
++ + V DLNL P PE+
Sbjct: 138 VVSVTASASGSGSSSVRNFDLNLKPVPET 166
>ref|XP_468767.1| putative zinc finger protein (C2H2-type) [Oryza sativa (japonica
cultivar-group)] gi|41469371|gb|AAS07213.1| putative
zinc finger protein (C2H2-type) [Oryza sativa (japonica
cultivar-group)]
Length = 417
Score = 59.7 bits (143), Expect = 4e-08
Identities = 45/149 (30%), Positives = 60/149 (40%), Gaps = 21/149 (14%)
Query: 26 QCSECGKKFWSEKALHGHMRCHPEREWRGINPPPKFRRPSQPQPQPPQTTVITQEEHEVA 85
+C CG+ F S +AL GH H + IN +P QP+P T + V+
Sbjct: 280 ECHGCGRAFLSYQALGGHRASH-----KRINSNCSLVKPPADQPEPSIETSFSSASTSVS 334
Query: 86 ACLLLLANANAKGDTCSSSKSEISCSSSHHHHKCSICLRVFSSGQALGGHKRRHWEKGGD 145
+++ A ++K C IC + F SGQALGGHKR H G
Sbjct: 335 PADTMISAATISKTVKKATK-----------FVCPICSKEFGSGQALGGHKRSHSIAGEL 383
Query: 146 LIHHHLPPPAPAPAPV-----LDLNLPPP 169
H P+ LDLNLP P
Sbjct: 384 YERGHADGIVKLEQPLLADRFLDLNLPAP 412
Score = 39.7 bits (91), Expect = 0.045
Identities = 39/180 (21%), Positives = 62/180 (33%), Gaps = 50/180 (27%)
Query: 59 PKFRRPSQPQPQPPQTTVITQEEHE-VAACLLLLANANAK--GDTCSSSKSEISCSSSHH 115
P+ R S P P + + EE E VA CL++L+ + S S + +SS+H
Sbjct: 173 PRRRPRSMRVPAPVRDEFVVDEEPEDVALCLVMLSRDTGRPWNSRPSDEYSSLMYNSSYH 232
Query: 116 HH---------------------------------------------KCSICLRVFSSGQ 130
HH +C C R F S Q
Sbjct: 233 HHHDAVSDDDLELSLSSPYADTEIRTKKRRKTTGAASTAGGEKRGRYECHGCGRAFLSYQ 292
Query: 131 ALGGHKRRHWEKGGDLIHHHLPPPAPAPAPVLDLNLPPPESGSDPITVPLDFAALDLSLR 190
ALGGH+ H + + PPA P P ++ + + P + A + +++
Sbjct: 293 ALGGHRASHKRINSNC--SLVKPPADQPEPSIETSFSSASTSVSPADTMISAATISKTVK 350
Score = 34.7 bits (78), Expect = 1.4
Identities = 13/29 (44%), Positives = 19/29 (64%)
Query: 111 SSSHHHHKCSICLRVFSSGQALGGHKRRH 139
S+S H C +C + F+ G++LGGH R H
Sbjct: 11 SASATRHSCKVCGKGFACGRSLGGHMRSH 39
>emb|CAB83312.1| putative protein [Arabidopsis thaliana]
gi|15242772|ref|NP_195971.1| zinc finger (C2H2 type)
family protein [Arabidopsis thaliana]
gi|51971385|dbj|BAD44357.1| unknown protein [Arabidopsis
thaliana] gi|11282320|pir||T48377 hypothetical protein
F12E4.290 - Arabidopsis thaliana
Length = 292
Score = 59.3 bits (142), Expect = 5e-08
Identities = 50/160 (31%), Positives = 59/160 (36%), Gaps = 34/160 (21%)
Query: 26 QCSECGKKFWSEKALHGHMRCHPEREWRGINPPPKFRRPSQPQPQPPQTTVITQEEHEVA 85
QC C K F S +AL GH R S +P+ + E+ +
Sbjct: 119 QCKTCDKSFHSFQALGGH-------------------RASHKKPKLGASVFKCVEKKTAS 159
Query: 86 ACLLLLANANAKGDTCSSSKSEISCSSSHHH-HKCSICLRVFSSGQALGGHKRRH----- 139
A + A A G S + S H+CSIC FSSGQALGGH RRH
Sbjct: 160 ASTVETVEAGAVGSFLSLQVTSSDGSKKPEKTHECSICKAEFSSGQALGGHMRRHRGLTI 219
Query: 140 ---------WEKGGDLIHHHLPPPAPAPAPVLDLNLPPPE 170
HHH P LDLNLP PE
Sbjct: 220 NANATSAIKTAISSSSHHHHEESIRPKNFLQLDLNLPAPE 259
Score = 33.1 bits (74), Expect = 4.2
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 12/74 (16%)
Query: 78 TQEEHEVAACLLLLANAN-AKGDTCSSSKSEISCSSSHHH-----------HKCSICLRV 125
T E+ ++A CL+LL+ + AK S + S+ ++C C +
Sbjct: 67 TDEDEDMANCLILLSQGHQAKSSDDHLSMQRMGFFSNKKPVASLGLGLDGVYQCKTCDKS 126
Query: 126 FSSGQALGGHKRRH 139
F S QALGGH+ H
Sbjct: 127 FHSFQALGGHRASH 140
>pir||T52382 zinc finger protein ZPT4-4, C2H2-type [imported] - garden petunia
gi|2346988|dbj|BAA21928.1| ZPT4-4 [Petunia x hybrida]
Length = 477
Score = 59.3 bits (142), Expect = 5e-08
Identities = 43/146 (29%), Positives = 56/146 (37%), Gaps = 27/146 (18%)
Query: 26 QCSECGKKFWSEKALHGHMRCHPEREWRGINPPPKFRRPSQPQPQPPQTTVITQEEHEVA 85
QC+ C K F S +AL GH H R+ Q Q + +I
Sbjct: 325 QCTTCNKSFHSYQALGGHSTSH--------------RKTKDLQNQATDSKIIKNSSKN-- 368
Query: 86 ACLLLLANANAKGDTCSSSKSEISCSSSHHHHKCSICLRVFSSGQALGGHKRRHW--EKG 143
N+ D S S ++C +C ++F SGQALGGHKR H E
Sbjct: 369 ---------NSTIDEFGEKDESFSVSKKLKGYECPLCFKIFQSGQALGGHKRSHLIAEAK 419
Query: 144 GDLIHHHLPPPAPAPAPVLDLNLPPP 169
+ + P P LDLNLP P
Sbjct: 420 SNNQVVMIEKPIPEIRDFLDLNLPAP 445
Score = 43.1 bits (100), Expect = 0.004
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 1 MRNSHSHTQKHVVPSPSSSPSGKWSQ-CSECGKKFWSEKALHGHMRCHPER 50
++ +H T K V S + ++ C ECGK+F S KAL GHM+CH ++
Sbjct: 66 LKENHKKTAKFVESSEEDTLLQNQNKVCKECGKRFQSWKALFGHMKCHSDK 116
>dbj|BAA85108.1| Cys2/His2-type zinc finger protein 1 [Arabidopsis thaliana]
gi|9758444|dbj|BAB09030.1| Cys2/His2-type zinc finger
protein 1 [Arabidopsis thaliana]
gi|27765016|gb|AAO23629.1| At5g67450 [Arabidopsis
thaliana] gi|27461508|gb|AAM78034.1| zinc finger protein
OZAKGYO [Arabidopsis thaliana]
gi|15240742|ref|NP_201546.1| zinc finger (C2H2 type)
protein 1 (AZF1) [Arabidopsis thaliana]
Length = 245
Score = 58.2 bits (139), Expect = 1e-07
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 25/133 (18%)
Query: 13 VPSPSSSPSGKWSQCSECGKKFWSEKALHGHMRCHPEREWRGINPPPKFRRPSQPQPQPP 72
+PS +S + +C+ CGK F S +AL GH H R+P+
Sbjct: 85 LPSRASPSDHRDYKCTVCGKSFSSYQALGGHKTSH--------------RKPTNTSITSG 130
Query: 73 QTTVITQEEHEVAACLLLLANANAKGDTCSSSKSEISCSSSHHHHKCSICLRVFSSGQAL 132
++ H + +++ N S K H CSIC + F+SGQAL
Sbjct: 131 NQE-LSNNSHSNSGSVVINVTVNTGNGVSQSGKI----------HTCSICFKSFASGQAL 179
Query: 133 GGHKRRHWEKGGD 145
GGHKR H++ G +
Sbjct: 180 GGHKRCHYDGGNN 192
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.316 0.132 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 423,331,053
Number of Sequences: 2540612
Number of extensions: 20870857
Number of successful extensions: 207702
Number of sequences better than 10.0: 2047
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 1579
Number of HSP's that attempted gapping in prelim test: 184823
Number of HSP's gapped (non-prelim): 19195
length of query: 191
length of database: 863,360,394
effective HSP length: 121
effective length of query: 70
effective length of database: 555,946,342
effective search space: 38916243940
effective search space used: 38916243940
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)
Lotus: description of TM0587.5