BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0550.6
(680 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_910569.1| Similar to Zea mays putative AC9 transposase. (... 52 8e-05
dbj|BAD44809.1| hypothetical protein [Oryza sativa (japonica cul... 52 8e-05
ref|NP_910568.1| Similar to Arabidopsis thaliana chromosome II B... 51 1e-04
ref|NP_009774.1| Highly charged, basic protein required for norm... 47 0.002
emb|CAG81045.1| unnamed protein product [Yarrowia lipolytica CLI... 47 0.002
emb|CAE64509.1| Hypothetical protein CBG09244 [Caenorhabditis br... 47 0.002
emb|CAB92017.2| related to actin-interacting protein AIP3 [Neuro... 47 0.002
pir||T49773 related to actin-interacting protein AIP3 [imported]... 47 0.002
emb|CAE71742.1| Hypothetical protein CBG18726 [Caenorhabditis br... 47 0.003
gb|EAA53821.1| hypothetical protein MG09571.4 [Magnaporthe grise... 47 0.003
gb|AAF53088.2| CG6392-PA [Drosophila melanogaster] gi|24583666|r... 46 0.003
ref|YP_060491.1| LPXTG anchored putative adhesin [Streptococcus ... 45 0.008
gb|EAA74228.1| hypothetical protein FG10944.1 [Gibberella zeae P... 45 0.008
gb|EAA74974.1| hypothetical protein FG10717.1 [Gibberella zeae P... 45 0.010
ref|XP_345441.1| PREDICTED: similar to ABTAP [Rattus norvegicus]... 44 0.013
gb|EAK93945.1| potential EH Domains and Endocytosis protein [Can... 44 0.013
ref|XP_640333.1| hypothetical protein DDB0205159 [Dictyostelium ... 44 0.013
ref|XP_531720.1| PREDICTED: similar to Ran GTPase-activating pro... 44 0.017
gb|AAH71200.1| Rangap1 protein [Mus musculus] gi|42490971|gb|AAH... 44 0.023
gb|AAB60517.1| RNA1 homolog 44 0.023
>ref|NP_910569.1| Similar to Zea mays putative AC9 transposase. (P03010) [Oryza
sativa (japonica cultivar-group)]
Length = 947
Score = 51.6 bits (122), Expect = 8e-05
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 146 IKLPFSPFICHVLSFLNVAPCQLQPNAWGFLRCFEILCEHLSFTPTYP----LFFLFYKS 201
++LP PF VL+ +AP QL PNAW L F LC P P +F F+ +
Sbjct: 98 MRLPLQPFFAAVLAHFGLAPSQLTPNAWRLLAGFAALCRRAGVAPPPPPPLTVFRHFFTA 157
Query: 202 VTTKPTSVKWVPLLARKNMSR---FTELKS-HYKVWQKKYFKVMESP 244
+ P + W AR + S FT L + W K+ F ++ SP
Sbjct: 158 IGCPPGA--WYSFRARGSASTGSLFTRLSNVTMNPWWKEQFILVSSP 202
>dbj|BAD44809.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 569
Score = 51.6 bits (122), Expect = 8e-05
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 146 IKLPFSPFICHVLSFLNVAPCQLQPNAWGFLRCFEILCEHLSFTPTYP----LFFLFYKS 201
++LP PF VL+ +AP QL PNAW L F LC P P +F F+ +
Sbjct: 98 MRLPLQPFFAAVLAHFGLAPSQLTPNAWRLLAGFAALCRRAGVAPPPPPPLTVFRHFFTA 157
Query: 202 VTTKPTSVKWVPLLARKNMSR---FTELKS-HYKVWQKKYFKVMESP 244
+ P + W AR + S FT L + W K+ F ++ SP
Sbjct: 158 IGCPPGA--WYSFRARGSASTGSLFTRLSNVTMNPWWKEQFILVSSP 202
>ref|NP_910568.1| Similar to Arabidopsis thaliana chromosome II BAC F13B15 genomic
sequence, putative non-LTR retroelement reverse
transcriptase. (AC006300) [Oryza sativa (japonica
cultivar-group)]
Length = 1285
Score = 51.2 bits (121), Expect = 1e-04
Identities = 72/306 (23%), Positives = 108/306 (34%), Gaps = 67/306 (21%)
Query: 142 LDLNIKLPFSPFICHVLSFLNVAPCQLQPNAWGFLRCFEILCEHLSFTPTYPLFFLFYKS 201
L+ ++LP PF C +L L VAP Q+ PN W + F +L H + P+ +F F++
Sbjct: 305 LEAGMRLPLHPFACELLRHLGVAPSQITPNGWRVVAGFLLLSHHAAAPPSLAVFRRFFRL 364
Query: 202 VTTKPTSVKWVPLLARKNMSR----FTELKSHYKVWQKKYFKVMESPEIKNLFRDSDNNP 257
+K W ++ FT L K W+ +F V
Sbjct: 365 FLSKLNG--WYHFRGKRGAGADGVLFTGLPK-LKGWKGGFFFVSS--------------- 406
Query: 258 LFPFYWTKNPRRKISVSYDALDESEQGVADYLRTLPVISGHDLIEASKSGTLNQFFTTMG 317
P W V + S+ A+ PV+SG ++ A K L+ G
Sbjct: 407 --PSPW------PCQVRWGGPPPSKSSTAE-----PVLSGEEMELAGKLLHLH------G 447
Query: 318 KSKVDANPIKMKEYLA-------QSAAAAKKRAAETEQKKKNEGTSGSDNVRDPKRQKTS 370
+ VD + LA AA + + K SG N + K + S
Sbjct: 448 GAAVDLRTYLCESNLAAVFSSNLAGAAPPQPPPPRPARAKGKFPFSGEFNAQKVKTEPES 507
Query: 371 SAAGGRPLHQSTLDPRSHPAEKKKG---HDNVPPPQQDSSALINRPPTPFNQAGPSLAIG 427
PL + KK+G +N PPP + PP P + A G
Sbjct: 508 DMPWWSPL-----------SGKKRGFEAEENNPPPSPTPT-----PPAPHGGSWSWSASG 551
Query: 428 GEAPPP 433
+PPP
Sbjct: 552 MCSPPP 557
>ref|NP_009774.1| Highly charged, basic protein required for normal cell-cycle
regulation of histone gene transcription; mutants
display strong synthetic defects with subunits of FACT,
a complex that allows RNA Pol II to elongate through
nucleosomes; Hpc2p [Saccharomyces cerevisiae]
gi|536602|emb|CAA85179.1| HPC2 [Saccharomyces
cerevisiae] gi|417142|sp|Q01448|HPC2_YEAST Histone
promoter control 2 protein gi|171700|gb|AAA34684.1| HPC2
protein
Length = 623
Score = 47.4 bits (111), Expect = 0.002
Identities = 75/327 (22%), Positives = 135/327 (40%), Gaps = 26/327 (7%)
Query: 253 SDNNPLFPFYWTKNPRRKISVSYDALDESEQGVADYLRTLPVISGHDLIEASKSGTLNQF 312
SD+ LF + K RKI + L ++ V + +ISG S SG +
Sbjct: 45 SDSEDLFNKFSNKKTNRKIPNIAEELAKNRNYVKGASPSPIIISGSS--STSPSGPSSSS 102
Query: 313 FTTMG--KSKVDANPIKMKEYLAQSAAAAKKRAAETEQKKKNEGTSGSDNVRDPKRQKTS 370
MG ++ + N +++ ++ K +TE+K++N DN P+R +S
Sbjct: 103 TNPMGIPTNRFNKNTVELYQHSPSPVMTTNK--TDTEEKRQNN--RNMDNKNTPERGSSS 158
Query: 371 SAAGGRPLHQSTLDPRSHPAEKKKGHDNVPPPQQDSSALINRPPTPFNQA-GPSLAIGGE 429
AA + L S+L S + K H N ++S+A N P+ + + +I
Sbjct: 159 FAA--KQLKISSLLTISSNEDSKTLHINDTNGNKNSNAASNNIPSAYAELHTEGNSIESL 216
Query: 430 APPPLLNLSDPHFNGLE----FMTRTFDNRIHKDIS-GQGPPN--IASVAIHHALSAAST 482
PP S P L T+ D I KD G P IA + L ST
Sbjct: 217 IKPP----SSPRNKSLTPKVILPTQNMDGTIAKDPHLGDNTPGILIAKTSSPVNLDVEST 272
Query: 483 VAGMAQCVKELISAKNRYEKKAADYKTAYERAKTDAETANKKLKSAEEKCAKLTEDLAAS 542
+ + K S K K A+ K + +R+ + ++ + S+++ ++ + +++
Sbjct: 273 AQSLGKFNKSTNSLKAALTKAPAE-KVSLKRSISSVTNSDSNISSSKKPTSEKAKKSSSA 331
Query: 543 DLLLQK---TKSLKEAINDKHTAIQAK 566
+L K TK+ K+A ++ + + K
Sbjct: 332 SAILPKPTTTKTSKKAASNSSDSTRKK 358
>emb|CAG81045.1| unnamed protein product [Yarrowia lipolytica CLIB99]
gi|50550769|ref|XP_502857.1| hypothetical protein
[Yarrowia lipolytica]
Length = 1098
Score = 47.4 bits (111), Expect = 0.002
Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 22/196 (11%)
Query: 491 KELISAKNRYEKKA--ADYKTAYERAKTDAETANKKLKSAEEKCAKLTEDLAASDLLLQK 548
K + A+N+ + A A K +R K +AE KK K+ + E+ +++ K
Sbjct: 33 KNAVKAENKAKNDAREAKKKEHEQRKKEEAEAMKKKAKNFNKSKFGKKEEEKVTEVKPSK 92
Query: 549 TKSL-------------KEAINDKHTAIQAKYQKLEKKYDRLNASIIGRASLQYDQGF-- 593
TK +++ +DK T + K + E K D L A I+ + D
Sbjct: 93 TKGSDKTEKSKGSRTKSQDSSSDKSTKTKTKTK--EFKPDSLLAEILELGGTEEDLKLVE 150
Query: 594 -LTAKEQISVVEP--GFDLSRIGWLKEIKDGQVVGDDDISLDLLPQFDDESEPEEDGEDG 650
L+ E VV P G + LK +KD + GD ++ + D E E EED ++G
Sbjct: 151 DLSDGEDDVVVNPSNGSKIDSGDLLKFMKDIGLDGDVPQLVEDVKDEDVEEEQEEDDDEG 210
Query: 651 NEQHRNEDQEKEDPQA 666
E +ED E++D ++
Sbjct: 211 MEDDEDEDTEEDDEES 226
>emb|CAE64509.1| Hypothetical protein CBG09244 [Caenorhabditis briggsae]
Length = 3376
Score = 47.4 bits (111), Expect = 0.002
Identities = 80/357 (22%), Positives = 137/357 (37%), Gaps = 21/357 (5%)
Query: 318 KSKVDANPIKMKEYLAQSAAAAKKRAAETEQKKKNEGTSGSDNVRDPKRQKTSSAAGGRP 377
K + DA K + A+ AK + E ++K K E + + D K +K + A
Sbjct: 1137 KKEADAKTKKEADDKAKKDLEAKTKK-EADEKAKKEAEAKTKKEADDKARKEAEAKKEAE 1195
Query: 378 LHQSTLDPRSHPAEKKKGHDNVPPPQQDSSAL----INRPPTPFNQAGPSLAIGGEAPPP 433
+ D A KK D+ + D A + + EA
Sbjct: 1196 AKKEADDKAKKEAVAKKVADDKTKKEADDKARNEAEAKKEAEDKAKKEDDAKTKKEADDK 1255
Query: 434 LLNLSDPHFNGLEFMTRTFDNRIHKDISGQGPPNIASVAIHHALSAASTVAGMAQCVKEL 493
+D N + + + KD+ + A L A + + KE
Sbjct: 1256 AKKKADEKAN------KEAEAKTKKDVEAKTKKEADDKA-KKDLEAKTKKEADEKAKKE- 1307
Query: 494 ISAKNRYEKKAADYKTAYERAKTDAETANKKLKSAEEKCAKLTEDLA-ASDLLLQKTKSL 552
A+ + +K+A K A ++AK D+E NKK A+EK K E A D ++ ++
Sbjct: 1308 --AEAKIKKEAEAKKEADDKAKKDSEAKNKK--EADEKARKEAETKKEAEDKAKKEAETK 1363
Query: 553 KEAINDKHTAIQAKYQKLEKKYDRLNASIIGRASLQYDQGFLTAKEQISVVEPGFDLSRI 612
KEA K + K + ++KK D+ ++SI +S F ++ VE D S
Sbjct: 1364 KEAELGKSDETKPKKRVVKKKTDKSDSSISQISSADTSSEFTVQEKPAEKVEQLPDESTS 1423
Query: 613 GWLKEI---KDGQVVGDDDISLDLLPQFDDESEPEEDGEDGNEQHRNEDQEKEDPQA 666
+K+ ++ +V + +S D P +PEE E ++ + +K D A
Sbjct: 1424 ATIKKAAQPQEPEVEKKELLSDDKKPVEGKPPKPEESDETTKKRVIKKKTQKSDSVA 1480
Score = 39.3 bits (90), Expect = 0.43
Identities = 78/389 (20%), Positives = 139/389 (35%), Gaps = 55/389 (14%)
Query: 318 KSKVDANPIKMKEYLAQSAAAAKKRAAETEQKKKNEGTSGSDNVRDPKRQKTSSAAGGRP 377
K + +A K + A++ A AKK A + +K + T + + K A +
Sbjct: 905 KKEAEAKTKKEADDKARNEAEAKKEAEDKAEKGADAKTKKEADDKAKKEAVAKKEADDKT 964
Query: 378 LHQSTLDPRSHPAEKKKGHDNVPPPQQDSSALINRPPTPFNQAGPSLAIGGEAPPPLLNL 437
++ + + KK+ D V ++D A + + I EA N
Sbjct: 965 KKEAEAEKEAEAKTKKEADDKV---KKDLEAKTKKEADEKAKKEAEAKIKKEADDKARNE 1021
Query: 438 SDPHFNGLEFMTRTFDNRIHKDISGQGPPNIASVAIHHA------LSAASTVAGMAQCVK 491
++ + + D + K+ + ++ ++ A + A T + K
Sbjct: 1022 AEAKKEAEDKAKKEADAKTKKEADDKAKKDLEAMTKKEADEKAKKEAEAKTKKEADEKAK 1081
Query: 492 ELISAKNRYE-----KKAADYKT-----------AYERAKTDAETANKK------LKSAE 529
+ AK + + KK AD K A E+AK +AE KK K A+
Sbjct: 1082 KEAEAKTKKDVEAKTKKEADDKAKKDLEAKTKKEADEKAKKEAEAKIKKEADDKTKKEAD 1141
Query: 530 EKCAKLTEDLAASDLLLQKTKSLKEAINDKHTAIQAKYQKLEKKYDRLNASIIGRASLQY 589
K K +D A DL + K+ KEA +AK +K R A A +
Sbjct: 1142 AKTKKEADDKAKKDL---EAKTKKEADEKAKKEAEAKTKKEADDKARKEAEAKKEAEAKK 1198
Query: 590 DQGFLTAKEQISVVEPGFDLSRIGWLKEIKDGQVVGDDDISLDLLPQFDDESEPEEDGED 649
+ KE ++ + V DD + + +E+E +++ ED
Sbjct: 1199 EADDKAKKEAVA--------------------KKVADDKTKKEADDKARNEAEAKKEAED 1238
Query: 650 GNEQHRNEDQEKE-DPQAGTSQGNNANNE 677
++ + +KE D +A AN E
Sbjct: 1239 KAKKEDDAKTKKEADDKAKKKADEKANKE 1267
>emb|CAB92017.2| related to actin-interacting protein AIP3 [Neurospora crassa]
Length = 1127
Score = 47.0 bits (110), Expect = 0.002
Identities = 37/135 (27%), Positives = 61/135 (44%), Gaps = 10/135 (7%)
Query: 553 KEAINDKHTAIQAKYQKLEKKYDRLNASIIGRASLQYDQGFLTAKEQISVVEPGFDLSRI 612
KE + + A+Q +Q + +R A + + LQ KE S VE G L +
Sbjct: 942 KEGVLGEVRALQPNHQSRLEAIER--AEKLRQKELQTRMVNPLTKELASFVEEG-KLKKS 998
Query: 613 GWLKEIKDGQVVGDDDISLD-------LLPQFDDESEPEEDGEDGNEQHRNEDQEKEDPQ 665
G ++E++ + DD I + L+ + DD+ E EED E+ E+ E+ E+E+ +
Sbjct: 999 GGVEEVERARKAKDDQIRREVWERMNGLIAENDDDGEDEEDDEEEEEEEEEEEGEEEEEE 1058
Query: 666 AGTSQGNNANNENLA 680
G Q E A
Sbjct: 1059 EGEEQEEGEEGEEKA 1073
>pir||T49773 related to actin-interacting protein AIP3 [imported] - Neurospora
crassa
Length = 972
Score = 47.0 bits (110), Expect = 0.002
Identities = 37/135 (27%), Positives = 61/135 (44%), Gaps = 10/135 (7%)
Query: 553 KEAINDKHTAIQAKYQKLEKKYDRLNASIIGRASLQYDQGFLTAKEQISVVEPGFDLSRI 612
KE + + A+Q +Q + +R A + + LQ KE S VE G L +
Sbjct: 787 KEGVLGEVRALQPNHQSRLEAIER--AEKLRQKELQTRMVNPLTKELASFVEEG-KLKKS 843
Query: 613 GWLKEIKDGQVVGDDDISLD-------LLPQFDDESEPEEDGEDGNEQHRNEDQEKEDPQ 665
G ++E++ + DD I + L+ + DD+ E EED E+ E+ E+ E+E+ +
Sbjct: 844 GGVEEVERARKAKDDQIRREVWERMNGLIAENDDDGEDEEDDEEEEEEEEEEEGEEEEEE 903
Query: 666 AGTSQGNNANNENLA 680
G Q E A
Sbjct: 904 EGEEQEEGEEGEEKA 918
>emb|CAE71742.1| Hypothetical protein CBG18726 [Caenorhabditis briggsae]
Length = 611
Score = 46.6 bits (109), Expect = 0.003
Identities = 37/126 (29%), Positives = 52/126 (40%), Gaps = 12/126 (9%)
Query: 560 HTAIQAKYQKLEKKYDRLNASIIGRASLQYDQGFLTAKEQISVVEP--GFDLSRIGWLKE 617
H I+ KY K E YD + I S YD G +++ +P G D G
Sbjct: 266 HLLIEMKYYKKEDDYDSSESEISTDESSDYDGG----EDESDSSDPNHGDDDDEDGTDST 321
Query: 618 IKDGQVVGDDDISL------DLLPQFDDESEPEEDGEDGNEQHRNEDQEKEDPQAGTSQG 671
+ D DDD + D D+E E E++GE EQ +D+EKED + Q
Sbjct: 322 VDDNNGYDDDDDNNGDDDNDDNNDYEDNEFEEEQEGEQEEEQDEEQDEEKEDEEQDEEQD 381
Query: 672 NNANNE 677
+ E
Sbjct: 382 KEQDEE 387
>gb|EAA53821.1| hypothetical protein MG09571.4 [Magnaporthe grisea 70-15]
gi|39961876|ref|XP_364726.1| hypothetical protein
MG09571.4 [Magnaporthe grisea 70-15]
Length = 709
Score = 46.6 bits (109), Expect = 0.003
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 484 AGMAQCVKELISAKNRYEKKAADYKTAYERAKTDAETANKKLKSAEEKCAKLTEDLAA-- 541
A ++ +E S K A + E A ETA + + + K +KL EDLAA
Sbjct: 237 AAASKGTEEAKSEVTSLNTKIAKLEEDLEAANKSTETAQAEAATLKTKISKLEEDLAAAK 296
Query: 542 --SDLLLQKTKSLKEAINDKHTAIQAKYQKLEKKYDRLNASIIG----RASLQYDQGFLT 595
SD L Q+ ++ K++++D + IQAK ++ E +L A+ +ASL+ Q LT
Sbjct: 297 SQSDKLTQEAEAQKKSLDDANAQIQAKTKETEDLLAKLKAAEASVAEKQASLEKTQAELT 356
Query: 596 A 596
+
Sbjct: 357 S 357
Score = 40.0 bits (92), Expect = 0.25
Identities = 67/266 (25%), Positives = 107/266 (40%), Gaps = 45/266 (16%)
Query: 319 SKVDANPI----KMKEYLAQSAAAAKKRA-AETEQKKKNEGTSGSDNVRDPKRQKTSSAA 373
SK DAN K AQ A A+K+A AET+ + E T+ +D + + +K+++
Sbjct: 473 SKADANSALETQKSAVADAQKAVEAEKKAHAETKSALEAEKTAAADAKKAVESEKSTAQE 532
Query: 374 GGRPLHQSTLDPRSHPAEKKKGHDNVPPPQQDSSALINRPPTPFNQAGPSLAIGGEAPPP 433
+ L AEK + + +SA+ +A +L A
Sbjct: 533 AQKALE----------AEKAAHAETKKSSEAGTSAV--------TEAQKALESEKAAHAE 574
Query: 434 LLNLSDPHFNGLEFMTRTFDNRIHKDISGQGPPNIASVAIHHALSAASTVAGMAQCVKEL 493
S+ L + D A+ AL A A A K+
Sbjct: 575 AKKASEADKAALADAKKALDAE-----------KAAAADAQKALEAEKAAAADA---KKA 620
Query: 494 ISAKNRYEKKAADYKTAYER-AKTDAETANKKLKSAEEKCAKLTEDLAASDLLLQKTKSL 552
+ A+ KKA + +TA + AK AE A KLK AEE L + +A ++ K
Sbjct: 621 LEAEKASAKKALETETAATKEAKKAAEDAQSKLKKAEEDTKALNKRVADAE------KES 674
Query: 553 KEAINDKHTAIQAKYQKLEKKYDRLN 578
KE ++ K TA +++ ++LE K L+
Sbjct: 675 KE-LSTKATAAESRTKELEAKVKELS 699
>gb|AAF53088.2| CG6392-PA [Drosophila melanogaster] gi|24583666|ref|NP_524993.2|
CG6392-PA [Drosophila melanogaster]
Length = 2013
Score = 46.2 bits (108), Expect = 0.003
Identities = 25/103 (24%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 492 ELISAKNRYEKKAADYKTAYE---RAKTDAETANKKLKSAEEKCAKLTEDLAASDLLLQK 548
E++S +++ E + + A + TD E +K+L +++ +L E A D Q
Sbjct: 704 EIVSVRDKLESVESAFNLASSEIIQKATDCERLSKELSTSQNAFGQLQERYDALDQQWQA 763
Query: 549 TKSLKEAINDKHTAIQAKYQKLEKKYDRLNASIIGRASLQYDQ 591
++ +++KH +Q KYQKL+++Y++L + +S ++ +
Sbjct: 764 QQAGITTLHEKHEHVQEKYQKLQEEYEQLESRARSASSAEFQR 806
>ref|YP_060491.1| LPXTG anchored putative adhesin [Streptococcus pyogenes MGAS10394]
gi|50903593|gb|AAT87308.1| LPXTG anchored putative
adhesin [Streptococcus pyogenes MGAS10394]
gi|40218526|gb|AAR83180.1| LPXTG anchored putative
adhesin [Streptococcus pyogenes]
Length = 1123
Score = 45.1 bits (105), Expect = 0.008
Identities = 52/193 (26%), Positives = 82/193 (41%), Gaps = 37/193 (19%)
Query: 493 LISAKNRYEKKAADY---KTAYERAKTDAETANKKLKSAEEKCAKLTEDLAASDL----- 544
L SAK EKK ADY ER K D E K++ A EK K T + A D+
Sbjct: 170 LESAKKDLEKKEADYVKENALVERDKKDLEKFEKEIAKAREK--KQTTEKAIKDINASKH 227
Query: 545 -LLQKTKSLKEAINDKHTA---IQAKYQKLEKKYDRLNASIIGRASLQYDQGFLTAKEQI 600
L+ K K LKE + T+ +Q Y K +K + + + + QY +++
Sbjct: 228 DLIDKDKKLKEKLETNKTSTKTLQTAYDKAKKNLEEKRTE-LEKLNKQYPPHGPALDQKL 286
Query: 601 SVVEPGFDLSRIGWLKEIK--DGQVVGDDDISLDLLPQFDDESEP---------EEDGED 649
+E KEIK + ++ G ++ +L Q S+ + DGE
Sbjct: 287 EEIE-----------KEIKALEDEMKGLENTQKELEAQKQTNSQMITEKGKEVLKLDGEI 335
Query: 650 GNEQHRNEDQEKE 662
G EQ + E+ +++
Sbjct: 336 GGEQGKLEEAKRK 348
>gb|EAA74228.1| hypothetical protein FG10944.1 [Gibberella zeae PH-1]
gi|46138859|ref|XP_391120.1| hypothetical protein
FG10944.1 [Gibberella zeae PH-1]
Length = 1493
Score = 45.1 bits (105), Expect = 0.008
Identities = 58/219 (26%), Positives = 89/219 (40%), Gaps = 39/219 (17%)
Query: 490 VKELISAKNRYEKKAADYKTAYERAKTDAET----ANKKLKSAEEKCAKLTEDL-----A 540
+KE IS+ N A K E+ K E ++K+L +A KL D+
Sbjct: 1030 IKEEISSNNEEISNAEVRKVKAEKQKVKLEKDHAKSSKELAAASRDLEKLENDINNQGER 1089
Query: 541 ASDLLLQKTKSLKEAINDKHTAIQAKYQKLEKKYDRLNAS----IIGRASLQYDQGFLTA 596
A +L Q ++ +E + K ++A +L++K D LN + I R L+ +Q L
Sbjct: 1090 AEELQAQVAEA-EEGLATKKQELKALKAELDEKTDELNETRAMEIEMRNKLEENQKALAE 1148
Query: 597 KEQ----------------ISVVEPGFDLSRIGWLKEIKDGQVVGDDDISLDLLPQFDDE 640
+Q I + G K+ K Q D DI +D PQ D +
Sbjct: 1149 NQQRLRHWNDKLSKIVLQNIDDLTGGSTNGHSKPRKQPKPQQNDDDGDIDMDDAPQDDVD 1208
Query: 641 --SEPEEDGEDGNEQHRNEDQEKEDPQAGTSQGNNANNE 677
PEE+GE ED ++E+ + G Q N NE
Sbjct: 1209 MTDAPEEEGE-------QEDADEEEEEEGEEQMNGQPNE 1240
>gb|EAA74974.1| hypothetical protein FG10717.1 [Gibberella zeae PH-1]
gi|46138405|ref|XP_390893.1| hypothetical protein
FG10717.1 [Gibberella zeae PH-1]
Length = 1075
Score = 44.7 bits (104), Expect = 0.010
Identities = 41/174 (23%), Positives = 74/174 (41%), Gaps = 11/174 (6%)
Query: 501 EKKAADYKTAYERAKTDAETANKKLKSAEEKCAKLTEDLAASDLLLQKTKSLKEAINDKH 560
+KK A+ + +++K D E AEEKC L + L+ D ++ ++ + +
Sbjct: 891 KKKDAEVEALQQQSKDDLEQQKSMTLKAEEKCQHLEKQLSGGDAGMKDMQARLARMESEL 950
Query: 561 TAIQAKYQKLEKKYDRLNASI---IGRASLQYDQGFLTAKEQISVVEPGFD--LSRIGWL 615
+A EK +L + +A + ++ +E + + D L G L
Sbjct: 951 SAANKARDAAEKNLSKLKEAAKEEAAKAKSEVEKQLSELREAREMTQSELDDLLMVFGDL 1010
Query: 616 KE----IKDGQVVGDDDISLDLLPQFDDESEPEEDGE--DGNEQHRNEDQEKED 663
+E KD + + +S DD+ E EE+G DG+E N D EK++
Sbjct: 1011 EEKMTKYKDRLIELGETVSDGEDDDEDDDDEEEENGSDADGSEGSDNNDDEKDE 1064
>ref|XP_345441.1| PREDICTED: similar to ABTAP [Rattus norvegicus]
gi|42491219|dbj|BAD10946.1| ABTAP [Rattus rattus]
Length = 842
Score = 44.3 bits (103), Expect = 0.013
Identities = 40/169 (23%), Positives = 71/169 (41%), Gaps = 27/169 (15%)
Query: 508 KTAYERAKTDAETANKKLKSAEEKCAKLTEDLAASDLLLQKTKSLKEAINDKHTAIQAKY 567
K +++ K D+E + K +EE + +DL ++ + K D T+ K
Sbjct: 142 KNSHKSPKIDSEVSPK---DSEESLQSRKKKRDTTDLSVEASPKGKLRTKDPSTSAMVK- 197
Query: 568 QKLEKKYDRLNASIIGRASLQYDQGFLTAKEQISVV-------EPGFDLSRIGWLKEIKD 620
++++ G + + Q + AK+ + E S +G +E +
Sbjct: 198 ----------SSTVSGSKAKREKQAVIMAKDNAGRMLHEEAPEEDSDSASELGRDEE-SE 246
Query: 621 GQVVGDDDISLDLLPQFDDESEPEEDGEDGNEQHRNEDQEKEDPQAGTS 669
G++ DD S D DDE+E EE+ EDG E+ E++E E S
Sbjct: 247 GEITSDDRASAD-----DDENEDEEEEEDGEEEEEEEEEEDESDDESDS 290
>gb|EAK93945.1| potential EH Domains and Endocytosis protein [Candida albicans
SC5314] gi|46434499|gb|EAK93907.1| potential EH Domains
and Endocytosis protein [Candida albicans SC5314]
Length = 1217
Score = 44.3 bits (103), Expect = 0.013
Identities = 60/238 (25%), Positives = 93/238 (38%), Gaps = 25/238 (10%)
Query: 379 HQSTLDPRSHPAEKKKGHDNV--------PPPQQDSSAL-------INRPPTPFNQAGPS 423
HQS+ + P E+KK ++ P PQQ ++ + PP P +Q PS
Sbjct: 426 HQSSSSNLASPVEEKKQVQSLSTGERAVSPQPQQQQKSVNYEALRSVPPPPPPPSQTQPS 485
Query: 424 LAIGGEAPPPLLNLSDPHFNGLEFMTRTFDNRIHKDISGQGPPNIASVAIHHALS-AAST 482
L AP P S + + + S +A AI LS A S
Sbjct: 486 LQKRDSAPVPGAVSSPNPYTPSSQQPSGERSLSQRAPSSSNDDLLADPAISGQLSQATSD 545
Query: 483 VAGMAQCVKELIS-AKNRYEKKAADYKTAYERAKTDAETAN--KKLKSAEEKCAKLTEDL 539
+A ++ +K L S N +EKK K T +E N K+L+++ + K E +
Sbjct: 546 IANVSNQIKSLTSQTTNLHEKKTRAEKELQRILITKSEIENKLKQLRASYDNEVKQVEQV 605
Query: 540 AASDLLLQKTKSLKEAINDKHTAIQAKYQKLEKKYDRLNASIIGRASLQYDQGFLTAK 597
A+ L K EA+ + + +AK L L+ + SLQ + L K
Sbjct: 606 EAN---LATAKEETEALRSEASIAEAKVNSLS---GELHEKQVAMESLQKENSTLKEK 657
>ref|XP_640333.1| hypothetical protein DDB0205159 [Dictyostelium discoideum]
gi|60468350|gb|EAL66357.1| hypothetical protein
DDB0205159 [Dictyostelium discoideum]
Length = 356
Score = 44.3 bits (103), Expect = 0.013
Identities = 35/146 (23%), Positives = 64/146 (42%), Gaps = 9/146 (6%)
Query: 542 SDLLLQKTKSLKEA----INDKHTAIQAKYQKLEKKYDRLNASIIGRASLQYDQGFLTAK 597
S+L+L+ K L E I +K + ++ K+ K+ LN S++ + FL
Sbjct: 47 SELILKSLKELTENEIKNIQNKKVIKKEQFFKVRKEKKSLNKLKNRLKSIEKKKQFLLKD 106
Query: 598 EQISVVEPGFDLSRIGWL-----KEIKDGQVVGDDDISLDLLPQFDDESEPEEDGEDGNE 652
E IS + ++ R L K+ D Q++ D + L+ + ++ E E+D + N
Sbjct: 107 ESISKEDKDKEILRQNQLLNDFQKQKNDQQLILDSILKLNNVNNNNNNKENEKDNNNNNN 166
Query: 653 QHRNEDQEKEDPQAGTSQGNNANNEN 678
+ N + + + NN NN N
Sbjct: 167 NNNNNNNNNNNNNNNNNNNNNNNNNN 192
>ref|XP_531720.1| PREDICTED: similar to Ran GTPase-activating protein 1 [Canis
familiaris]
Length = 991
Score = 43.9 bits (102), Expect = 0.017
Identities = 38/147 (25%), Positives = 74/147 (49%), Gaps = 27/147 (18%)
Query: 534 KLTE-DLAASDLLLQKTKSLKEAINDKHTAIQAKYQKLEKKYDRLNASIIGRASLQYDQG 592
KL E +L+ ++ ++ EA+ DK A+ +KL+ LN +++G
Sbjct: 674 KLKELNLSFCEIKRDAALAVAEAVADK-----AELEKLD-----LNGNMLGEEGC----- 718
Query: 593 FLTAKEQISVVEPGFDLSRIGWLKEIKDGQVVGDDDISLDLLPQFDDESEPEEDGEDGNE 652
EQ+ V GF+++R+ L + D + G+DD + + ++E E EE+ ED E
Sbjct: 719 -----EQLQEVLDGFNMARV--LASLSDDE--GEDDEEEEEEEEEEEEGEEEEEEED--E 767
Query: 653 QHRNEDQEKEDPQAGTSQGNNANNENL 679
+ E++E+E+PQ G + ++ + +
Sbjct: 768 EEEEEEEEEEEPQQGQGEESSTPSRKI 794
>gb|AAH71200.1| Rangap1 protein [Mus musculus] gi|42490971|gb|AAH66213.1| Rangap1
protein [Mus musculus]
Length = 589
Score = 43.5 bits (101), Expect = 0.023
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 24/117 (20%)
Query: 554 EAINDKHTAIQAKYQKLEKKYDRLNASIIGRASLQYDQGFLTAKEQISVVEPGFDLSRIG 613
EA+ DK A+ +KL+ LN + +G EQ+ V F+++++
Sbjct: 315 EAVADK-----AELEKLD-----LNGNALGEEGC----------EQLQEVMDSFNMAKV- 353
Query: 614 WLKEIKDGQVVGDDDISLDLLPQFDDESEPEEDGEDGNEQHRNEDQEKEDPQAGTSQ 670
L + D + G+D+ + + D+E E EED ED +E+ +++E+E PQ G+ +
Sbjct: 354 -LASLSDDE--GEDEDEEEEGEEDDEEEEDEEDEEDDDEEEEEQEEEEEPPQRGSGE 407
>gb|AAB60517.1| RNA1 homolog
Length = 589
Score = 43.5 bits (101), Expect = 0.023
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 24/117 (20%)
Query: 554 EAINDKHTAIQAKYQKLEKKYDRLNASIIGRASLQYDQGFLTAKEQISVVEPGFDLSRIG 613
EA+ DK A+ +KL+ LN + +G EQ+ V F+++++
Sbjct: 315 EAVADK-----AELEKLD-----LNGNALGEEGC----------EQLQEVMDSFNMAKV- 353
Query: 614 WLKEIKDGQVVGDDDISLDLLPQFDDESEPEEDGEDGNEQHRNEDQEKEDPQAGTSQ 670
L + D + G+D+ + + D+E E EED ED +E+ +++E+E PQ G+ +
Sbjct: 354 -LASLSDDE--GEDEDEEEEGEEDDEEEEDEEDEEDDDEEEEEQEEEEEPPQRGSGE 407
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.312 0.131 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,247,702,666
Number of Sequences: 2540612
Number of extensions: 57846124
Number of successful extensions: 271810
Number of sequences better than 10.0: 1251
Number of HSP's better than 10.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 1018
Number of HSP's that attempted gapping in prelim test: 265420
Number of HSP's gapped (non-prelim): 4871
length of query: 680
length of database: 863,360,394
effective HSP length: 135
effective length of query: 545
effective length of database: 520,377,774
effective search space: 283605886830
effective search space used: 283605886830
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 79 (35.0 bits)
Lotus: description of TM0550.6