BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0550.4
         (888 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB10243.1| mitochondrial Lon protease homolog 1 precursor [...  1425  0.0
gb|AAM95459.1| Lon protease [Oryza sativa (indica cultivar-group)]   1414  0.0
gb|AAK62365.1| Lon protease [Dichanthelium lanuginosum]              1407  0.0
gb|AAC50011.1| LON1 protease [Zea mays] gi|7428224|pir||T04321 e...  1406  0.0
dbj|BAD33324.1| putative Lon protease [Oryza sativa (japonica cu...  1394  0.0
gb|AAS19619.1| LON1 protease [Triticum aestivum]                     1390  0.0
pir||T09142 endopeptidase La homolog (EC 3.4.21.-) - spinach gi|...  1380  0.0
gb|AAQ56835.1| At5g47040 [Arabidopsis thaliana] gi|27311537|gb|A...   928  0.0
gb|AAH86968.1| Zgc:92557 [Danio rerio] gi|56693217|ref|NP_001008...   704  0.0
ref|XP_614496.1| PREDICTED: similar to peroxisomal lon protease ...   692  0.0
ref|NP_080103.1| peroxisomal lon protease [Mus musculus] gi|2914...   688  0.0
ref|XP_535313.1| PREDICTED: similar to peroxisomal lon protease ...   687  0.0
emb|CAD68987.1| peroxisomal lon protease [Homo sapiens] gi|62740...   681  0.0
dbj|BAC11201.1| unnamed protein product [Homo sapiens]                680  0.0
emb|CAH92585.1| hypothetical protein [Pongo pygmaeus]                 677  0.0
emb|CAD38889.1| hypothetical protein [Homo sapiens]                   655  0.0
ref|XP_214655.3| PREDICTED: similar to RIKEN cDNA 1300002A08 [Ra...   644  0.0
dbj|BAB55278.1| unnamed protein product [Homo sapiens]                610  e-173
ref|NP_636358.1| ATP-dependent serine proteinase La [Xanthomonas...   585  e-165
ref|YP_199674.1| ATP-dependent serine proteinase La [Xanthomonas...   581  e-164

>dbj|BAB10243.1| mitochondrial Lon protease homolog 1 precursor [Arabidopsis
           thaliana] gi|18422747|ref|NP_568675.1| Lon protease
           homolog 1, mitochondrial (LON) [Arabidopsis thaliana]
           gi|2935279|gb|AAC05085.1| Lon protease [Arabidopsis
           thaliana] gi|3914002|sp|O64948|LONH1_ARATH Lon protease
           homolog 1, mitochondrial precursor
          Length = 888

 Score = 1425 bits (3689), Expect = 0.0
 Identities = 729/891 (81%), Positives = 807/891 (89%), Gaps = 6/891 (0%)

Query: 1   MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQREDKGLIGILPVRD 60
           MAE+VELPSRLAILPFRNKVLLPGAIIRIRCTS +SV LVEQELWQ+E+KGLIGILPVRD
Sbjct: 1   MAETVELPSRLAILPFRNKVLLPGAIIRIRCTSHSSVTLVEQELWQKEEKGLIGILPVRD 60

Query: 61  AAETEVKPVGPTISQDG--DTLDQSSKVHGASSDSHKLDAKAQNDVVHWHNRGVAARALH 118
            AE     +G  I+     D+ ++S K    ++D+ K DAK Q D+  WH RGVAARALH
Sbjct: 61  DAEGS--SIGTMINPGAGSDSGERSLKFLVGTTDAQKSDAKDQQDL-QWHTRGVAARALH 117

Query: 119 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMNKTEMEQVEHDPDFI 178
           LSRGVEKPSGRVTY+VVLEGL RF+VQEL  RG Y  ARI+SLEM K E+EQV+ DPDF+
Sbjct: 118 LSRGVEKPSGRVTYVVVLEGLSRFNVQELGKRGPYSVARITSLEMTKAELEQVKQDPDFV 177

Query: 179 MLSRQFKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDS 238
            LSRQFK TAMEL+SVLEQKQKTGGRTKVLLETVP+HKLADIFVASFE+SFEEQLSMLDS
Sbjct: 178 ALSRQFKTTAMELVSVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEMSFEEQLSMLDS 237

Query: 239 VDAKLRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 298
           VD K+RLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE+LLRQQMRAIKEELGDNDD
Sbjct: 238 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEYLLRQQMRAIKEELGDNDD 297

Query: 299 DEDDLAALERKMQSAGMPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLPWQKA 358
           DEDD+AALERKMQ+AGMP +IWKHA RELRRLKKMQPQQPGY+SSR YL+LLADLPW KA
Sbjct: 298 DEDDVAALERKMQAAGMPSNIWKHAQRELRRLKKMQPQQPGYNSSRVYLELLADLPWDKA 357

Query: 359 SEEHEMDLKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 418
           SEEHE+DLK+A+ERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL
Sbjct: 358 SEEHELDLKAAKERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 417

Query: 419 ASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLLDEI 478
           ASSIAAAL RKFVR+SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV VCNPVMLLDEI
Sbjct: 418 ASSIAAALGRKFVRLSLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 477

Query: 479 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQQIPPPLLDR 538
           DKTGSDVRGDPASALLEVLDPEQNK+FNDHYLNVP+DLSKV+FVATANR Q IPPPLLDR
Sbjct: 478 DKTGSDVRGDPASALLEVLDPEQNKSFNDHYLNVPYDLSKVVFVATANRVQPIPPPLLDR 537

Query: 539 MEVIELPGYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQRYTREAGVRNL 598
           ME+IELPGYT EEKLKIAM+HLIPRVLDQHGLSSE+L+IPE MV+ +IQRYTREAGVR+L
Sbjct: 538 MELIELPGYTQEEKLKIAMRHLIPRVLDQHGLSSEFLKIPEAMVKNIIQRYTREAGVRSL 597

Query: 599 ERNLASLARAAAVRVAEQEQVVPLNKEVQGLTTPLLENRLTDGAEVEMEVIPMDVNSRDI 658
           ERNLA+LARAAAV VAE EQ +PL+K+VQ LT+PLL  R+ +G EVEMEVIPM VN  +I
Sbjct: 598 ERNLAALARAAAVMVAEHEQSLPLSKDVQKLTSPLLNGRMAEGGEVEMEVIPMGVNDHEI 657

Query: 659 SNTFRITSPLVVNEAILEKVLGPPKFDGREAAERVAAPGICVGLVWTTFGGEVQFVEATE 718
             TF+  S LVV+E +LEK+LGPP+FD  EAA+RVA+ G+ VGLVWTTFGGEVQFVEAT 
Sbjct: 658 GGTFQSPSALVVDETMLEKILGPPRFDDSEAADRVASAGVSVGLVWTTFGGEVQFVEATS 717

Query: 719 MVGKGDLHLTGQLGDVIKESAQIALTWVRARAADLRLASAEGINLLEGRDIHIHFPAGAI 778
           MVGKG++HLTGQLGDVIKESAQ+ALTWVRARA+D +LA A  +N+L+GRDIHIHFPAGA+
Sbjct: 718 MVGKGEMHLTGQLGDVIKESAQLALTWVRARASDFKLALAGDMNVLDGRDIHIHFPAGAV 777

Query: 779 PKDGPSAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHRCGIKR 838
           PKDGPSAGVTLVTALVSLFS+KRVR+DTAMTGEMTLRGLVLPVGGIKDKILAAHR GIKR
Sbjct: 778 PKDGPSAGVTLVTALVSLFSQKRVRADTAMTGEMTLRGLVLPVGGIKDKILAAHRYGIKR 837

Query: 839 VIIPERNLKDLVEVPSSVLVNLEILLAKRMEDVLEQALEGGCPWRHQ-SKL 888
           VI+P+RN KDLVEVP++VL +LE++LAKRMEDVLE A EGGCPWR+  SKL
Sbjct: 838 VILPQRNSKDLVEVPAAVLSSLEVILAKRMEDVLENAFEGGCPWRNNYSKL 888


>gb|AAM95459.1| Lon protease [Oryza sativa (indica cultivar-group)]
          Length = 884

 Score = 1414 bits (3661), Expect = 0.0
 Identities = 722/886 (81%), Positives = 795/886 (89%), Gaps = 7/886 (0%)

Query: 4   SVELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQREDKGLIGILPVRDAAE 63
           +VELP RLAILPFRNKVLLPGAI+RIRCT+P+SVKLVEQELWQRE+KGLIG+LPV D+ E
Sbjct: 5   AVELPGRLAILPFRNKVLLPGAIVRIRCTNPSSVKLVEQELWQREEKGLIGVLPVHDS-E 63

Query: 64  TEVKPVGPTISQDGDTLDQSSKVHGASS-DSHKLDAKAQNDVVHWHNRGVAARALHLSRG 122
                + P +  D    +  SK  G S+ +S K D K   + +HWH+RGVAARALHLSRG
Sbjct: 64  AAGSLLSPGVGSDSG--EGGSKAPGGSAGESTKQDTKNGKETIHWHSRGVAARALHLSRG 121

Query: 123 VEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMNKTEMEQVEHDPDFIMLSR 182
           VEKPSGRVTYIVVLEGLCRFSVQELS RG+YH AR+S L+M KTE+E  E DPD I LSR
Sbjct: 122 VEKPSGRVTYIVVLEGLCRFSVQELSARGSYHVARVSRLDMTKTELEHAEQDPDLIALSR 181

Query: 183 QFKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDAK 242
           QFKATAMELISVLEQKQKT GRTKVLLETVPV++LADIFVASFEISFEEQLSMLDSVD K
Sbjct: 182 QFKATAMELISVLEQKQKTVGRTKVLLETVPVYRLADIFVASFEISFEEQLSMLDSVDLK 241

Query: 243 LRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD 302
           +RLSKATELVDRHLQSI VAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD
Sbjct: 242 VRLSKATELVDRHLQSILVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD 301

Query: 303 LAALERKMQSAGMPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLPWQKASEEH 362
           +AALERKMQ+AGMP +IWKHA RELRRL+KMQPQQPGYSSSR YL+LLA+LPWQK SEE 
Sbjct: 302 VAALERKMQNAGMPANIWKHAQRELRRLRKMQPQQPGYSSSRTYLELLAELPWQKVSEER 361

Query: 363 EMDLKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSI 422
           E+DL++A+E LD DHYGL KVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSI
Sbjct: 362 ELDLRAAKESLDRDHYGLTKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSI 421

Query: 423 AAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLLDEIDKTG 482
           A ALDRKF+RISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV+V NPVMLLDEIDKTG
Sbjct: 422 AKALDRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSVSNPVMLLDEIDKTG 481

Query: 483 SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQQIPPPLLDRMEVI 542
           SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANR Q IPPPLLDRMEVI
Sbjct: 482 SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRMQPIPPPLLDRMEVI 541

Query: 543 ELPGYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQRYTREAGVRNLERNL 602
           ELPGYTPEEKLKIAMKHLIPRVL+QHGLSS YLQIPE MV+L+I+RYTREAGVRNLERNL
Sbjct: 542 ELPGYTPEEKLKIAMKHLIPRVLEQHGLSSTYLQIPEAMVRLIIERYTREAGVRNLERNL 601

Query: 603 ASLARAAAVRVAEQEQVVPLNKEVQGLTTPLLENRLTDGAEVEMEVIPMDVNSRDISNTF 662
           A+LARAAAV+VAEQ+ V+ L KE+Q +TT LL++RL DG EVEMEVIPM    +DISNT+
Sbjct: 602 AALARAAAVKVAEQDSVLRLGKEIQPITTTLLDSRLADGGEVEMEVIPM---GQDISNTY 658

Query: 663 RITSPLVVNEAILEKVLGPPKFDGREAAERVAAPGICVGLVWTTFGGEVQFVEATEMVGK 722
              SP++V+EA+LEKVLGPP+FD  EAA+RVA+PG+ VGLVWT+FGGEVQFVEAT MVGK
Sbjct: 659 ENPSPMIVDEAMLEKVLGPPRFDDSEAADRVASPGVSVGLVWTSFGGEVQFVEATAMVGK 718

Query: 723 GDLHLTGQLGDVIKESAQIALTWVRARAADLRLASAEGINLLEGRDIHIHFPAGAIPKDG 782
           GDLHLTGQLGDVIKESAQ+ALTWVRARAADL L+    INLLE RDIHIHFPAGA+PKDG
Sbjct: 719 GDLHLTGQLGDVIKESAQLALTWVRARAADLNLSPTSDINLLESRDIHIHFPAGAVPKDG 778

Query: 783 PSAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHRCGIKRVIIP 842
           PSAGVTLVT+LVSLFS ++VR+DTAMTGEMTLRGLVLPVGG+KDK+LAAHR GIKRVI+P
Sbjct: 779 PSAGVTLVTSLVSLFSHRKVRADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILP 838

Query: 843 ERNLKDLVEVPSSVLVNLEILLAKRMEDVLEQALEGGCPWRHQSKL 888
           ERN+KDL EVP+ +L  LEILL KR+E+VL+ A EGGCP R  SKL
Sbjct: 839 ERNMKDLAEVPAPILSGLEILLVKRIEEVLDHAFEGGCPLRPHSKL 884


>gb|AAK62365.1| Lon protease [Dichanthelium lanuginosum]
          Length = 884

 Score = 1407 bits (3641), Expect = 0.0
 Identities = 721/890 (81%), Positives = 794/890 (89%), Gaps = 8/890 (0%)

Query: 1   MAES-VELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQREDKGLIGILPVR 59
           MA+S VELP RLAILPFRNKVLLPGAI+RIRCT+P+SVKLVEQELWQ+E+KGLIG+LPVR
Sbjct: 1   MADSPVELPGRLAILPFRNKVLLPGAIVRIRCTNPSSVKLVEQELWQKEEKGLIGVLPVR 60

Query: 60  DAAETEVKPVGPTISQD-GDTLDQSSKVHGASSDSHKLDAKAQNDVVHWHNRGVAARALH 118
           D+   E   VG  +S   G    +     G S +S K D K   + +HWH++GVAARALH
Sbjct: 61  DS---EAAAVGSLLSPGVGSDSGEGGSKAGGSGESSKQDTKNGKEPIHWHSKGVAARALH 117

Query: 119 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMNKTEMEQVEHDPDFI 178
           LSRGVEKPSGRVTYIVVLEGLCRFSVQELS RG+YH AR+S L+M KTE+EQ E DPD I
Sbjct: 118 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSARGSYHVARVSRLDMTKTELEQAEQDPDLI 177

Query: 179 MLSRQFKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDS 238
            LSRQFKATAMELISVLEQKQKT GRTKVLL+TVPV++LADIFVASFEISFEEQLSMLDS
Sbjct: 178 ALSRQFKATAMELISVLEQKQKTVGRTKVLLDTVPVYRLADIFVASFEISFEEQLSMLDS 237

Query: 239 VDAKLRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 298
           VD K+RLSKATELVDRHLQSI VAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD
Sbjct: 238 VDLKVRLSKATELVDRHLQSILVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 297

Query: 299 DEDDLAALERKMQSAGMPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLPWQKA 358
           DEDD+AALERKMQ+AGMP +IWKHA RELRRL+KMQPQQPGYSSSRAYL+LLADLPWQK 
Sbjct: 298 DEDDVAALERKMQNAGMPANIWKHAQRELRRLRKMQPQQPGYSSSRAYLELLADLPWQKV 357

Query: 359 SEEHEMDLKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 418
           SEE E+DL++A+E LD DHYGL KVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL
Sbjct: 358 SEERELDLRAAKESLDQDHYGLPKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 417

Query: 419 ASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLLDEI 478
           ASSIA AL+RKF+RISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV+V NPVMLLDEI
Sbjct: 418 ASSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSVSNPVMLLDEI 477

Query: 479 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQQIPPPLLDR 538
           DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANR Q IPPPLLD 
Sbjct: 478 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRMQPIPPPLLDS 537

Query: 539 MEVIELPGYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQRYTREAGVRNL 598
           MEVIELPGYTPEEKLKIAMKHLIPRVL+QHGLSS YLQIPE   +L+I+RYTREAGVRNL
Sbjct: 538 MEVIELPGYTPEEKLKIAMKHLIPRVLEQHGLSSAYLQIPEVRSKLIIERYTREAGVRNL 597

Query: 599 ERNLASLARAAAVRVAEQEQVVPLNKEVQGLTTPLLENRLTDGAEVEMEVIPMDVNSRDI 658
           ERNLA+LARAAAV+VAEQ   + L+KE+Q +TT LL++RL DG EVEMEVIPM     DI
Sbjct: 598 ERNLAALARAAAVKVAEQVNTLRLSKEIQPITTTLLDSRLADGGEVEMEVIPM---GHDI 654

Query: 659 SNTFRITSPLVVNEAILEKVLGPPKFDGREAAERVAAPGICVGLVWTTFGGEVQFVEATE 718
           SNT+   SP++V+E +LEKVLGPP+FD REAA+RVA+PG+ VGLVWT+FGGEVQFVEAT 
Sbjct: 655 SNTYENPSPMIVDETMLEKVLGPPRFDDREAADRVASPGVSVGLVWTSFGGEVQFVEATA 714

Query: 719 MVGKGDLHLTGQLGDVIKESAQIALTWVRARAADLRLASAEGINLLEGRDIHIHFPAGAI 778
           MVGKGDLHLTGQLGDVIKESAQ+ALTWVRARAADL L+    INLLE RDIHIHFPAGA+
Sbjct: 715 MVGKGDLHLTGQLGDVIKESAQLALTWVRARAADLNLSPTSDINLLESRDIHIHFPAGAV 774

Query: 779 PKDGPSAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHRCGIKR 838
           PKDGPSAGVTLVT+LVSLFS ++VR+DTAMTGEMTLRGLVLPVGG+KDK+LAAHR GIKR
Sbjct: 775 PKDGPSAGVTLVTSLVSLFSNRKVRADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKR 834

Query: 839 VIIPERNLKDLVEVPSSVLVNLEILLAKRMEDVLEQALEGGCPWRHQSKL 888
           VI+PERNLKDL EVPS +L  +EILL KR+E+VL+ A EGGC  R +SKL
Sbjct: 835 VILPERNLKDLTEVPSPILSGMEILLVKRIEEVLDHAFEGGCLLRSRSKL 884


>gb|AAC50011.1| LON1 protease [Zea mays] gi|7428224|pir||T04321 endopeptidase La
           homolog (EC 3.4.21.-) LON1 precursor, mitochondrial -
           maize gi|3914005|sp|P93647|LONH1_MAIZE Lon protease
           homolog 1, mitochondrial precursor
          Length = 885

 Score = 1406 bits (3639), Expect = 0.0
 Identities = 717/885 (81%), Positives = 794/885 (89%), Gaps = 6/885 (0%)

Query: 5   VELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQREDKGLIGILPVRDAAET 64
           VELPSRLA+LPFRNKVLLPGAI+RIRCT+P+SVKLVEQELWQ+E+KGLIG+LPVRD+  T
Sbjct: 6   VELPSRLAVLPFRNKVLLPGAIVRIRCTNPSSVKLVEQELWQKEEKGLIGVLPVRDSEAT 65

Query: 65  EVKPV-GPTISQDGDTLDQSSKVHGASSDSHKLDAKAQNDVVHWHNRGVAARALHLSRGV 123
            V  +  P +  D    +  SKV G++ +S K D K   + +HWH++GVAARALHLSRGV
Sbjct: 66  AVGSLLSPGVGSDSG--EGGSKVGGSAVESSKQDTKNGKEPIHWHSKGVAARALHLSRGV 123

Query: 124 EKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMNKTEMEQVEHDPDFIMLSRQ 183
           EKPSGRVTYIVVLEGLCRFSVQELS RG YH AR+S L+M KTE+EQ E DPD I LSRQ
Sbjct: 124 EKPSGRVTYIVVLEGLCRFSVQELSARGPYHVARVSRLDMTKTELEQAEQDPDLIALSRQ 183

Query: 184 FKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDAKL 243
           FKATAMELISVLEQKQKT GRTKVLL+TVPV++LADIFVASFEISFEEQLSMLDSV  K+
Sbjct: 184 FKATAMELISVLEQKQKTVGRTKVLLDTVPVYRLADIFVASFEISFEEQLSMLDSVHLKV 243

Query: 244 RLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDL 303
           RLSKATELVDRHLQSI VAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD+
Sbjct: 244 RLSKATELVDRHLQSILVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDV 303

Query: 304 AALERKMQSAGMPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLPWQKASEEHE 363
           AALERKMQ+AGMP +IWKHA RE+RRL+KMQPQQPGYSSSRAYL+LLADLPWQK SEE E
Sbjct: 304 AALERKMQNAGMPANIWKHAQREMRRLRKMQPQQPGYSSSRAYLELLADLPWQKVSEERE 363

Query: 364 MDLKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA 423
           +DL+ A+E LD DHYGL KVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA
Sbjct: 364 LDLRVAKESLDQDHYGLTKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA 423

Query: 424 AALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLLDEIDKTGS 483
            AL+RKF+RISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV+V NPVMLLDEIDKTGS
Sbjct: 424 KALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSVSNPVMLLDEIDKTGS 483

Query: 484 DVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQQIPPPLLDRMEVIE 543
           DVRGDPASALLEVLDPEQNK FNDHYLNVPFDLSKVIFVATANR Q IPPPLLDRME+IE
Sbjct: 484 DVRGDPASALLEVLDPEQNKAFNDHYLNVPFDLSKVIFVATANRMQPIPPPLLDRMEIIE 543

Query: 544 LPGYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQRYTREAGVRNLERNLA 603
           LPGYTPEEKLKIAMKHLIPRVL+QHGLS+  LQIPE MV+LVI+RYTREAGVRNLERNLA
Sbjct: 544 LPGYTPEEKLKIAMKHLIPRVLEQHGLSTTNLQIPEAMVKLVIERYTREAGVRNLERNLA 603

Query: 604 SLARAAAVRVAEQEQVVPLNKEVQGLTTPLLENRLTDGAEVEMEVIPMDVNSRDISNTFR 663
           +LARAAAV+VAEQ + + L KE+Q +TT LL++RL DG EVEMEVIPM+    DISNT+ 
Sbjct: 604 ALARAAAVKVAEQVKTLRLGKEIQPITTTLLDSRLADGGEVEMEVIPME---HDISNTYE 660

Query: 664 ITSPLVVNEAILEKVLGPPKFDGREAAERVAAPGICVGLVWTTFGGEVQFVEATEMVGKG 723
             SP++V+EA+LEKVLGPP+FD REAA+RVA+PG+ VGLVWT+ GGEVQFVEAT MVGKG
Sbjct: 661 NPSPMIVDEAMLEKVLGPPRFDDREAADRVASPGVSVGLVWTSVGGEVQFVEATAMVGKG 720

Query: 724 DLHLTGQLGDVIKESAQIALTWVRARAADLRLASAEGINLLEGRDIHIHFPAGAIPKDGP 783
           DLHLTGQLGDVIKESAQ+ALTWVRARAADL L+    INLLE RDIHIHFPAGA+PKDGP
Sbjct: 721 DLHLTGQLGDVIKESAQLALTWVRARAADLNLSPTSDINLLESRDIHIHFPAGAVPKDGP 780

Query: 784 SAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHRCGIKRVIIPE 843
           SAGVTLVTALVSLFS ++VR+DTAMTGEMTLRGLVLPVGG+KDK+LAAHR GIKRVI+PE
Sbjct: 781 SAGVTLVTALVSLFSNRKVRADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPE 840

Query: 844 RNLKDLVEVPSSVLVNLEILLAKRMEDVLEQALEGGCPWRHQSKL 888
           RNLKDL EVP  +L ++EILL KR+E+VL+ A EG CP R +SKL
Sbjct: 841 RNLKDLSEVPLPILSDMEILLVKRIEEVLDHAFEGRCPLRSRSKL 885


>dbj|BAD33324.1| putative Lon protease [Oryza sativa (japonica cultivar-group)]
           gi|52075953|dbj|BAD46033.1| putative Lon protease [Oryza
           sativa (japonica cultivar-group)]
          Length = 880

 Score = 1394 bits (3607), Expect = 0.0
 Identities = 715/886 (80%), Positives = 789/886 (88%), Gaps = 11/886 (1%)

Query: 4   SVELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQREDKGLIGILPVRDAAE 63
           +VELP RLAILPFRNKVLLPGAI+RIRCT+P+SVKLVEQELWQRE+KGLIG+LPV D+ E
Sbjct: 5   AVELPGRLAILPFRNKVLLPGAIVRIRCTNPSSVKLVEQELWQREEKGLIGVLPVHDS-E 63

Query: 64  TEVKPVGPTISQDGDTLDQSSKVHGASS-DSHKLDAKAQNDVVHWHNRGVAARALHLSRG 122
                + P +  D    +  SK  G S+ +S K D K   + +HWH+RGVAARALHLSRG
Sbjct: 64  AAGSLLSPGVGSDSG--EGGSKAPGGSAGESTKQDTKNGKETIHWHSRGVAARALHLSRG 121

Query: 123 VEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMNKTEMEQVEHDPDFIMLSR 182
           VEKPSGRVTYIVVLEGLCRFSVQELS RG+YH AR+S L+M KTE+E  E DPD I LSR
Sbjct: 122 VEKPSGRVTYIVVLEGLCRFSVQELSARGSYHVARVSRLDMTKTELEHAEQDPDLIALSR 181

Query: 183 QFKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDAK 242
           QFKATAMELISVLEQKQKT GRTKVLLETVPV++LADIFVASFEI FEEQLSMLDSVD K
Sbjct: 182 QFKATAMELISVLEQKQKTVGRTKVLLETVPVYRLADIFVASFEIGFEEQLSMLDSVDLK 241

Query: 243 LRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD 302
           +RLSKATELVDRHLQSI VAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD
Sbjct: 242 VRLSKATELVDRHLQSILVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD 301

Query: 303 LAALERKMQSAGMPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLPWQKASEEH 362
           +AALERKMQ+AGMP +IWKHA RELRRL+KMQPQQPGYSSSR YL+LLA+LPWQK SEE 
Sbjct: 302 VAALERKMQNAGMPANIWKHAQRELRRLRKMQPQQPGYSSSRTYLELLAELPWQKVSEER 361

Query: 363 EMDLKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSI 422
           E+DL++A+E LD DHYGL KVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSI
Sbjct: 362 ELDLRAAKESLDRDHYGLTKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSI 421

Query: 423 AAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLLDEIDKTG 482
           A AL+RKF+RISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV+V NPVMLLDEIDKTG
Sbjct: 422 AKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSVSNPVMLLDEIDKTG 481

Query: 483 SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQQIPPPLLDRMEVI 542
           SDVRGDPASALLEVLDPEQNKT    YLNVPFDLSKVIFVATANR Q IPPPLLDRMEVI
Sbjct: 482 SDVRGDPASALLEVLDPEQNKT----YLNVPFDLSKVIFVATANRMQPIPPPLLDRMEVI 537

Query: 543 ELPGYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQRYTREAGVRNLERNL 602
           ELPGYTPEEKLKIAMKHLIPRVL+QHGLSS YLQIPE MV+L+I+RYTREAGVRNLERNL
Sbjct: 538 ELPGYTPEEKLKIAMKHLIPRVLEQHGLSSTYLQIPEAMVRLIIERYTREAGVRNLERNL 597

Query: 603 ASLARAAAVRVAEQEQVVPLNKEVQGLTTPLLENRLTDGAEVEMEVIPMDVNSRDISNTF 662
           A+LARAAAV+VAEQ+  + L KE+Q +TT LL++RL DG EVEMEVIPM    +DISNT+
Sbjct: 598 AALARAAAVKVAEQDSALRLGKEIQPITTTLLDSRLADGGEVEMEVIPM---GQDISNTY 654

Query: 663 RITSPLVVNEAILEKVLGPPKFDGREAAERVAAPGICVGLVWTTFGGEVQFVEATEMVGK 722
              SP++V+EA+LEKVLGPP+FD  EAA+RVA+PG+ VGLVWT+FGGEVQFVEAT MVGK
Sbjct: 655 ENPSPMIVDEAMLEKVLGPPRFDDSEAADRVASPGVSVGLVWTSFGGEVQFVEATAMVGK 714

Query: 723 GDLHLTGQLGDVIKESAQIALTWVRARAADLRLASAEGINLLEGRDIHIHFPAGAIPKDG 782
           GDLHLTGQLGDVIKESAQ+ALTWVRARAADL L+    INLLE RDIHIHFPAGA+PKDG
Sbjct: 715 GDLHLTGQLGDVIKESAQLALTWVRARAADLNLSPTSDINLLESRDIHIHFPAGAVPKDG 774

Query: 783 PSAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHRCGIKRVIIP 842
           PSAGVTLVT+LVSLFS ++VR+DTAMTGEMTLRGLVLPVGG+KDK+LAAHR GIKRVI+P
Sbjct: 775 PSAGVTLVTSLVSLFSHRKVRADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILP 834

Query: 843 ERNLKDLVEVPSSVLVNLEILLAKRMEDVLEQALEGGCPWRHQSKL 888
           ERN+KDL EVP+ +L  LEILL KR+E+VL+ A EGGCP R  SKL
Sbjct: 835 ERNMKDLAEVPAPILSGLEILLVKRIEEVLDHAFEGGCPLRPHSKL 880


>gb|AAS19619.1| LON1 protease [Triticum aestivum]
          Length = 886

 Score = 1390 bits (3598), Expect = 0.0
 Identities = 705/885 (79%), Positives = 789/885 (88%), Gaps = 5/885 (0%)

Query: 5   VELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQREDKGLIGILPVRDAAET 64
           VELP RLAILPFRNKVLLPGAI+RIRCT P+SVKLVEQELWQRED+GLIG+LPVRD+   
Sbjct: 6   VELPGRLAILPFRNKVLLPGAIVRIRCTYPSSVKLVEQELWQREDRGLIGVLPVRDSEAA 65

Query: 65  EVKPV-GPTISQDGDTLDQSSKVHGASSDSHKLDAKAQNDVVHWHNRGVAARALHLSRGV 123
            V  +  P +  D     + S   G+  +S K DAK+  + +HWH+RGVAARALHLSRGV
Sbjct: 66  AVGSILSPGVGSDSGDGGRRSP-GGSGGESTKQDAKSGKEPIHWHSRGVAARALHLSRGV 124

Query: 124 EKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMNKTEMEQVEHDPDFIMLSRQ 183
           EKPSGRVTYIVVLEGLCRFSV+EL+ RG+YH AR+S L+M KTE+EQ E DPD I LSRQ
Sbjct: 125 EKPSGRVTYIVVLEGLCRFSVEELNARGSYHVARVSRLDMTKTELEQAEQDPDLIALSRQ 184

Query: 184 FKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDAKL 243
           FKATAMELISVLEQKQKT GRTKVLLETVPV++LADIFVASFEISFEEQL+MLDSVD K+
Sbjct: 185 FKATAMELISVLEQKQKTVGRTKVLLETVPVYRLADIFVASFEISFEEQLAMLDSVDLKV 244

Query: 244 RLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDL 303
           RLSKATELVDRHLQSI VAEKITQKVEGQLSKSQKEFLLRQQMRAIK+ELGDNDDDEDD+
Sbjct: 245 RLSKATELVDRHLQSILVAEKITQKVEGQLSKSQKEFLLRQQMRAIKDELGDNDDDEDDI 304

Query: 304 AALERKMQSAGMPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLPWQKASEEHE 363
           AALERKMQ+AGMP +IWKHA RELRRL+KMQPQQPGYSSSRAYL+L+ADLPWQK SEE E
Sbjct: 305 AALERKMQNAGMPANIWKHAQRELRRLRKMQPQQPGYSSSRAYLELIADLPWQKVSEERE 364

Query: 364 MDLKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA 423
           +DL++A+E LD DHYGL KVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLA+SIA
Sbjct: 365 LDLRAAKESLDRDHYGLTKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLATSIA 424

Query: 424 AALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLLDEIDKTGS 483
            AL+RKF+RISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV+V NPVMLLDEIDKTGS
Sbjct: 425 KALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSVNNPVMLLDEIDKTGS 484

Query: 484 DVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQQIPPPLLDRMEVIE 543
           DVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV+FVATANR Q IPP LLDRMEVIE
Sbjct: 485 DVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATANRMQPIPPALLDRMEVIE 544

Query: 544 LPGYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQRYTREAGVRNLERNLA 603
           LPGYTPEEKLKIAMKHL+PRVL+QHGLSS YLQIPE +V+L+I+RYTREAGVRNLERNLA
Sbjct: 545 LPGYTPEEKLKIAMKHLLPRVLEQHGLSSAYLQIPEAVVKLIIERYTREAGVRNLERNLA 604

Query: 604 SLARAAAVRVAEQEQVVPLNKEVQGLTTPLLENRLTDGAEVEMEVIPMDVNSRDISNTFR 663
           +LARAAAV+VAE +  + L KE+Q +TT LL++RL DG EVEMEVIPM    +DISNT+ 
Sbjct: 605 ALARAAAVKVAELDSTLRLGKEMQPITTTLLDSRLADGGEVEMEVIPM---GQDISNTYE 661

Query: 664 ITSPLVVNEAILEKVLGPPKFDGREAAERVAAPGICVGLVWTTFGGEVQFVEATEMVGKG 723
             SP++V+EA+LEKVLGPP+FD REAA+RV++PG+ VGLVWT+FGGEVQFVEAT M GKG
Sbjct: 662 NPSPMIVDEAMLEKVLGPPRFDDREAADRVSSPGVSVGLVWTSFGGEVQFVEATAMAGKG 721

Query: 724 DLHLTGQLGDVIKESAQIALTWVRARAADLRLASAEGINLLEGRDIHIHFPAGAIPKDGP 783
           DLHLTGQLGDVIKESAQ+ALTWVRAR+ADL L+    IN+LE RDIHIHFPAGA+PKDGP
Sbjct: 722 DLHLTGQLGDVIKESAQLALTWVRARSADLNLSPTSDINILESRDIHIHFPAGAVPKDGP 781

Query: 784 SAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHRCGIKRVIIPE 843
           SAGVTLVT+LVSLFS ++VR+DTAMTGEMTLRGLVLPVGG+KDK+LAAHR GIKRVI+PE
Sbjct: 782 SAGVTLVTSLVSLFSNRKVRADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPE 841

Query: 844 RNLKDLVEVPSSVLVNLEILLAKRMEDVLEQALEGGCPWRHQSKL 888
           RNLKDL E+P+ +L  +EILL KR+E+VL  A E G P R  S L
Sbjct: 842 RNLKDLAEIPAPILAGIEILLVKRIEEVLGHAFENGFPLRLHSSL 886


>pir||T09142 endopeptidase La homolog (EC 3.4.21.-) - spinach
           gi|3913996|sp|O04979|LONH1_SPIOL Lon protease homolog 1,
           mitochondrial precursor gi|2208927|dbj|BAA20482.1|
           ATP-dependent protease Lon [Spinacia oleracea]
          Length = 875

 Score = 1380 bits (3572), Expect = 0.0
 Identities = 697/871 (80%), Positives = 783/871 (89%), Gaps = 4/871 (0%)

Query: 1   MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQREDKGLIGILPVRD 60
           MAE+VELPSRL IL FRNKVLLPGAIIRIRCTSP+SVKLVEQELWQRE+KGLIGI+PVRD
Sbjct: 1   MAEAVELPSRLGILAFRNKVLLPGAIIRIRCTSPSSVKLVEQELWQREEKGLIGIVPVRD 60

Query: 61  AAETEVKPVGPTISQDG--DTLDQSSKVHGASSDSHKLDAKAQNDVVHWHNRGVAARALH 118
           A+E+    V P +   G  D+ +++ K     SDS K D K+Q + VHWH RGVAARALH
Sbjct: 61  ASESA--SVAPVLYPGGGTDSGERNVKSQPGLSDSRKADGKSQQEAVHWHTRGVAARALH 118

Query: 119 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMNKTEMEQVEHDPDFI 178
           LSRGVEKPSGRVTY VVLEGLCRF V EL++RG Y+TARIS L++ K +MEQ + DPDF+
Sbjct: 119 LSRGVEKPSGRVTYTVVLEGLCRFRVMELNSRGNYYTARISPLDITKADMEQAQQDPDFV 178

Query: 179 MLSRQFKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDS 238
            L+RQFK TA+ELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQL MLDS
Sbjct: 179 SLARQFKVTAVELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLCMLDS 238

Query: 239 VDAKLRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 298
           +D K+RLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQ+EFLLRQQMRAIKEELGDNDD
Sbjct: 239 IDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQREFLLRQQMRAIKEELGDNDD 298

Query: 299 DEDDLAALERKMQSAGMPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLPWQKA 358
           DEDD+A LERKMQSAGMP +IWKHA RELRRLKKMQPQQPGYSSSR YL+LLADLPWQ A
Sbjct: 299 DEDDVAVLERKMQSAGMPANIWKHAQRELRRLKKMQPQQPGYSSSRVYLELLADLPWQNA 358

Query: 359 SEEHEMDLKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 418
           +EE ++DL++A+ERLDSDHYGL KVKQRIIEYLAVRKLKPDARGP+LCFVGPPGVGKTSL
Sbjct: 359 TEEQKLDLRAAKERLDSDHYGLVKVKQRIIEYLAVRKLKPDARGPILCFVGPPGVGKTSL 418

Query: 419 ASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLLDEI 478
           A+SI+AAL RKF+RISLGGVKDEADIRGHRRTYIGSMPGRLIDG+KRV V NPVMLLDEI
Sbjct: 419 AASISAALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGIKRVGVSNPVMLLDEI 478

Query: 479 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQQIPPPLLDR 538
           DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP+DLSKVIFVATAN+ Q IPPPLLDR
Sbjct: 479 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPYDLSKVIFVATANKVQPIPPPLLDR 538

Query: 539 MEVIELPGYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQRYTREAGVRNL 598
           MEVIELPGYTPEEK +IAM++LIPRV+DQHGLSSE+LQI E MV+L+IQRYTREAGVRNL
Sbjct: 539 MEVIELPGYTPEEKARIAMQYLIPRVMDQHGLSSEFLQISEDMVKLIIQRYTREAGVRNL 598

Query: 599 ERNLASLARAAAVRVAEQEQVVPLNKEVQGLTTPLLENRLTDGAEVEMEVIPMDVNSRDI 658
           ERNL++LARAAAV+VAEQ+    ++K+    T+P+ E+RL +GAEVEMEVIPM V++R+I
Sbjct: 599 ERNLSALARAAAVKVAEQDNATAVSKDFHQFTSPVEESRLAEGAEVEMEVIPMGVDNREI 658

Query: 659 SNTFRITSPLVVNEAILEKVLGPPKFDGREAAERVAAPGICVGLVWTTFGGEVQFVEATE 718
           SN  ++ SPL+V+E +LE VLGPP++D RE AERV+ PG+ VGLVWT FGGEVQFVEA+ 
Sbjct: 659 SNALQVMSPLIVDETMLENVLGPPRYDDRETAERVSNPGVSVGLVWTAFGGEVQFVEASV 718

Query: 719 MVGKGDLHLTGQLGDVIKESAQIALTWVRARAADLRLASAEGINLLEGRDIHIHFPAGAI 778
           M GKG+L LTGQLGDVIKESAQIALTWVRARA +L L +   INL+EGRDIHIHFPAGA+
Sbjct: 719 MAGKGELRLTGQLGDVIKESAQIALTWVRARAMELNLVATGEINLMEGRDIHIHFPAGAV 778

Query: 779 PKDGPSAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHRCGIKR 838
           PKDGPSAGVTLVTALVSL S+KR+R+DTAMTGEMTLRGLVLPVGG+KDK+LAAHR GIKR
Sbjct: 779 PKDGPSAGVTLVTALVSLLSQKRMRADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKR 838

Query: 839 VIIPERNLKDLVEVPSSVLVNLEILLAKRME 869
           VI+PERNLKDLVEVPS+VL NLEI+ AKRME
Sbjct: 839 VILPERNLKDLVEVPSAVLSNLEIIYAKRME 869


>gb|AAQ56835.1| At5g47040 [Arabidopsis thaliana] gi|27311537|gb|AAO00734.1| Lon
           protease homolog 1 precursor [Arabidopsis thaliana]
          Length = 557

 Score =  928 bits (2399), Expect = 0.0
 Identities = 464/557 (83%), Positives = 515/557 (92%), Gaps = 1/557 (0%)

Query: 333 MQPQQPGYSSSRAYLDLLADLPWQKASEEHEMDLKSAQERLDSDHYGLAKVKQRIIEYLA 392
           MQPQQPGY+SSR YL+LLADLPW KASEEHE+DLK+A+ERLDSDHYGLAKVKQRIIEYLA
Sbjct: 1   MQPQQPGYNSSRVYLELLADLPWDKASEEHELDLKAAKERLDSDHYGLAKVKQRIIEYLA 60

Query: 393 VRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALDRKFVRISLGGVKDEADIRGHRRTYI 452
           VRKLKPDARGPVLCFVGPPGVGKTSLASSIAAAL RKFVR+SLGGVKDEADIRGHRRTYI
Sbjct: 61  VRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALGRKFVRLSLGGVKDEADIRGHRRTYI 120

Query: 453 GSMPGRLIDGLKRVAVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNV 512
           GSMPGRLIDGLKRV VCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNK+FNDHYLNV
Sbjct: 121 GSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKSFNDHYLNV 180

Query: 513 PFDLSKVIFVATANRAQQIPPPLLDRMEVIELPGYTPEEKLKIAMKHLIPRVLDQHGLSS 572
           P+DLSKV+FVATANR Q IPPPLLDRME+IELPGYT EEKLKIAM+HLIPRVLDQHGLSS
Sbjct: 181 PYDLSKVVFVATANRVQPIPPPLLDRMELIELPGYTQEEKLKIAMRHLIPRVLDQHGLSS 240

Query: 573 EYLQIPEGMVQLVIQRYTREAGVRNLERNLASLARAAAVRVAEQEQVVPLNKEVQGLTTP 632
           E+L+IPE MV+ +IQRYTREAGVR+LERNLA+LARAAAV VAE EQ +PL+K+VQ LT+P
Sbjct: 241 EFLKIPEAMVKNIIQRYTREAGVRSLERNLAALARAAAVMVAEHEQSLPLSKDVQKLTSP 300

Query: 633 LLENRLTDGAEVEMEVIPMDVNSRDISNTFRITSPLVVNEAILEKVLGPPKFDGREAAER 692
           LL  R+ +G EVEMEVIPM VN  +I  TF+  S LVV+E +LEK+LGPP+FD  EAA+R
Sbjct: 301 LLNGRMAEGGEVEMEVIPMGVNDHEIGGTFQSPSALVVDETMLEKILGPPRFDDSEAADR 360

Query: 693 VAAPGICVGLVWTTFGGEVQFVEATEMVGKGDLHLTGQLGDVIKESAQIALTWVRARAAD 752
           VA+ G+ VGLVWTTFGGEVQFVEAT MVGKG++HLTGQLGDVIKESAQ+ALTWVRARA+D
Sbjct: 361 VASAGVSVGLVWTTFGGEVQFVEATSMVGKGEMHLTGQLGDVIKESAQLALTWVRARASD 420

Query: 753 LRLASAEGINLLEGRDIHIHFPAGAIPKDGPSAGVTLVTALVSLFSKKRVRSDTAMTGEM 812
            +LA A  +N+L+GRDIHIHFPAGA+PKDGPSAGVTLVTALVSLFS+KRVR+DTAMTGEM
Sbjct: 421 FKLALAGDMNVLDGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSQKRVRADTAMTGEM 480

Query: 813 TLRGLVLPVGGIKDKILAAHRCGIKRVIIPERNLKDLVEVPSSVLVNLEILLAKRMEDVL 872
           TLRGLVLPVGGIKDKILAAHR GIKRVI+P+RN KDLVEVP++VL +LE++LAKRMEDVL
Sbjct: 481 TLRGLVLPVGGIKDKILAAHRYGIKRVILPQRNSKDLVEVPAAVLSSLEVILAKRMEDVL 540

Query: 873 EQALEGGCPWRHQ-SKL 888
           E A EGGCPWR+  SKL
Sbjct: 541 ENAFEGGCPWRNNYSKL 557


>gb|AAH86968.1| Zgc:92557 [Danio rerio] gi|56693217|ref|NP_001008573.1|
           hypothetical protein LOC494030 [Danio rerio]
          Length = 840

 Score =  704 bits (1817), Expect = 0.0
 Identities = 389/887 (43%), Positives = 563/887 (62%), Gaps = 75/887 (8%)

Query: 5   VELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQRED--KGLIGILPVRDAA 62
           +++PSRL +L   + VLLPG+ +R+   +  +++LV+  L +       +IG++P     
Sbjct: 7   IQIPSRLPLLCTHDGVLLPGSTMRVSVDTARNMQLVKSRLLKGTSLKSTIIGVIP----- 61

Query: 63  ETEVKPVGPTISQDGDTLDQSSKVHGASSDSHKLDAKAQNDVVHWHNRGVAARALHLSRG 122
                                        DS +L +         H+ G A  A+ +  G
Sbjct: 62  ----------------------NTRDPEHDSDELPSL--------HSIGTAGLAVQVV-G 90

Query: 123 VEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMNKTEMEQVEHDPDFIMLSR 182
              P     Y +++ GLCRF V +L     +  A +  L+  +   E    D +   LS+
Sbjct: 91  SNWPKPH--YTLLITGLCRFRVSQLLRERPFPVAEVEQLDKLEQYTEGDPADGELGELSQ 148

Query: 183 QFKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDAK 242
           +F   A++L+ +L+       + + LL+++P   L D+  A    S +E+L +LD+VD +
Sbjct: 149 RFYQAAVQLVGMLDMSVPVVAKLRRLLDSLPKETLPDVLAAMIRTSNKEKLQVLDAVDLE 208

Query: 243 LRLSKATELVDRHLQSIRVAEKITQKVEGQLSKS----QKEFLLRQQMRAIKEELGDNDD 298
            R  KA  L+ R ++ +++ +K T+K+     K     +K  +   +  ++ EE+   D+
Sbjct: 209 ERFKKALPLLTRQIEGLKLLQK-TRKLRPDDDKRVLSIRKGGVFPGRQFSLDEEV--EDE 265

Query: 299 DEDDLAALERKMQSAGMPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLPWQKA 358
           D DD A LERK+++A MP++  +   +ELRRLKKM    P Y+ +R YL+++ +LPW K+
Sbjct: 266 DSDDTALLERKVKAAAMPEAALRVCLKELRRLKKMPQSMPEYALTRNYLEMMVELPWSKS 325

Query: 359 SEEHEMDLKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 418
           + +  +D+++A+  LD+DHY + K+K+R++EYLAVR+LK   +GP+LCFVGPPGVGKTS+
Sbjct: 326 TTDC-LDIRAARVLLDNDHYAMEKLKKRVLEYLAVRQLKSTLKGPILCFVGPPGVGKTSV 384

Query: 419 ASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLLDEI 478
             SIA  L R+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK V V NPV LLDE+
Sbjct: 385 GRSIARTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDEV 444

Query: 479 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQQIPPPLLDR 538
           DK G  ++GDPA+ALLEVLDPEQN +F DHYLNVPFDLS+V+F+ATAN    IPP LLDR
Sbjct: 445 DKLGKSLQGDPAAALLEVLDPEQNHSFTDHYLNVPFDLSQVLFIATANTTATIPPALLDR 504

Query: 539 MEVIELPGYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQRYTREAGVRNL 598
           MEV+++PGYT EEK++IA +HLIP  L+QHGL+ + LQIP+     +I +YTREAGVR+L
Sbjct: 505 MEVLQVPGYTQEEKVEIAHRHLIPHQLEQHGLTPQQLQIPQDTTLQIISKYTREAGVRSL 564

Query: 599 ERNLASLARAAAVRVAEQEQV----VPLNKEVQGLTTPLLENRLTDGAEVEMEVIPMDVN 654
           ER + ++ RA AV+VAE ++V     P  +  +  T   +E+    G     E+      
Sbjct: 565 ERKIGAVCRAVAVKVAEGQKVSRSEAPTEQHAEQNTDSKVED---SGIAAPPEM------ 615

Query: 655 SRDISNTFRITSPLVVNEAILEKVLGPPKFDGREAAERVAAPGICVGLVWTTFGGEVQFV 714
                       P+V++   L+ +LGPP F+  E +ER+  PG+ +GL WT  GGE+ FV
Sbjct: 616 ------------PIVIDHVALKDILGPPLFE-MEVSERLTLPGVAIGLAWTPMGGEIMFV 662

Query: 715 EATEMVGKGDLHLTGQLGDVIKESAQIALTWVRARAADLRLASAEGINLLEGRDIHIHFP 774
           EA+ M G+G L LTGQLGDV+KESA +A++W+R+ A    L      +LLEG DIH+HFP
Sbjct: 663 EASRMEGEGQLTLTGQLGDVMKESAHLAISWLRSNAKTYLLNDGSA-DLLEGTDIHLHFP 721

Query: 775 AGAIPKDGPSAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHRC 834
           AGA+ KDGPSAGVT+VT L SL S + VRSD AMTGE+TLRGLVLPVGGIKDK+LAAHR 
Sbjct: 722 AGAVTKDGPSAGVTIVTCLASLLSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRA 781

Query: 835 GIKRVIIPERNLKDLVEVPSSVLVNLEILLAKRMEDVLEQALEGGCP 881
            +KR+IIP+RN KDL E+P++V  +L+ +LA  +++VL  A +GG P
Sbjct: 782 NLKRIIIPKRNEKDLEEIPANVRADLDFVLAGTLDEVLNAAFDGGFP 828


>ref|XP_614496.1| PREDICTED: similar to peroxisomal lon protease [Bos taurus]
          Length = 852

 Score =  692 bits (1786), Expect = 0.0
 Identities = 386/889 (43%), Positives = 560/889 (62%), Gaps = 71/889 (7%)

Query: 5   VELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQRED--KGLIGILPVRDAA 62
           +++PSRL +L     VLLPG+ +R    S  +++LV   L +       ++G++P     
Sbjct: 7   IQIPSRLPLLLTHEGVLLPGSTMRTSVDSARNLQLVRSRLLKGTSLQSTILGVIP----- 61

Query: 63  ETEVKPVGPTISQDGDTLDQSSKVHGASSDSHKLDAKAQNDVVHWHNRGVAARALHLSRG 122
                          +T D +S            DA+   D+   H  G AA A+ +  G
Sbjct: 62  ---------------NTPDPAS------------DAQ---DLPPLHRIGTAALAVQVV-G 90

Query: 123 VEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMNKTEMEQVEHDPDFIMLSR 182
              P     Y +++ GLCRF + ++     Y  A +  L+  +      +   +   LS 
Sbjct: 91  SNWPKPH--YTLLITGLCRFQITQVVREKPYPVAEVEQLDRLEEFPNTCKTREELGELSE 148

Query: 183 QFKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDAK 242
           QF   A++L+ +L+       + + LL+++P   L DI  +    S +E+L +LD+V  +
Sbjct: 149 QFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPREALPDILTSIIRTSNKEKLQILDAVSLE 208

Query: 243 LRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG-----DND 297
            R      L+ R ++ +    K+ QK         K  +  + MR I    G     D D
Sbjct: 209 ERFKMTIPLLVRQIEGL----KLLQKTRKHKQDDDKRVIAIRPMRRITHVPGALADEDED 264

Query: 298 DDEDDLAALERKMQSAGMPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLPWQK 357
           +D DD+  LE+K++++ MP+   K   +E++RLKKM    P Y+ +R YL+L+ +LPW K
Sbjct: 265 EDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVELPWNK 324

Query: 358 ASEEHEMDLKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 417
           ++ +  +D+++A+  LD+DHY + K+K+R++EYLAVR+LK + +GP+LCFVGPPGVGKTS
Sbjct: 325 STTDR-LDIRAARVLLDNDHYAMEKLKKRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTS 383

Query: 418 LASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLLDE 477
           +  S+A  L R+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK V V NPV LLDE
Sbjct: 384 VGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDE 443

Query: 478 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQQIPPPLLD 537
           +DK G  ++GDPA+ALLEVLDPEQN  F DHYLNV FDLS+V+F+ATAN    IPP LLD
Sbjct: 444 VDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTTASIPPALLD 503

Query: 538 RMEVIELPGYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQRYTREAGVRN 597
           RME+I++PGYT EEK++IA +HLIP+ L+QHGL+ + +QIP+     +I RYTREAGVR+
Sbjct: 504 RMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQVTTLDIITRYTREAGVRS 563

Query: 598 LERNLASLARAAAVRVAE-QEQVVPLNK----EVQGLTTPLLENRLTDGAEVEMEV-IPM 651
           L+R L ++ RA AV+VAE Q +   L++    E +G    LLE+  +D      ++ +P 
Sbjct: 564 LDRKLGAICRAVAVKVAEGQHREAKLDRPDVAEGEGCKEHLLEDGKSDPVSDTTDLALPP 623

Query: 652 DVNSRDISNTFRITSPLVVNEAILEKVLGPPKFDGREAAERVAAPGICVGLVWTTFGGEV 711
           ++             P++++   L+ +LGPP ++  E +ER++ PG+ +GL WT  GGE+
Sbjct: 624 EM-------------PILIDFHALKDILGPPMYE-MEVSERLSQPGVAIGLAWTPLGGEI 669

Query: 712 QFVEATEMVGKGDLHLTGQLGDVIKESAQIALTWVRARAADLRLASAEG-INLLEGRDIH 770
            FVEA+ M G+G L LTGQLG+V+KESA +A++W+R+ A    L +A G  +LLE  DIH
Sbjct: 670 MFVEASRMDGEGQLTLTGQLGNVMKESAHLAISWLRSNAKKYHLTNASGSFDLLENTDIH 729

Query: 771 IHFPAGAIPKDGPSAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKILA 830
           +HFPAGA+ KDGPSAGVT+ T L SLFS + VRSD AMTGE+TLRGLVLPVGGIKDK LA
Sbjct: 730 LHFPAGAVTKDGPSAGVTIATCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKALA 789

Query: 831 AHRCGIKRVIIPERNLKDLVEVPSSVLVNLEILLAKRMEDVLEQALEGG 879
           AHR G+KRVIIP+RN KDL E+P++V  +L  + A  +++VL  A +GG
Sbjct: 790 AHRAGLKRVIIPQRNEKDLEEIPANVRQDLSFITASCLDEVLNAAFDGG 838


>ref|NP_080103.1| peroxisomal lon protease [Mus musculus] gi|29144996|gb|AAH49090.1|
           RIKEN cDNA 1300002A08 [Mus musculus]
           gi|26340950|dbj|BAC34137.1| unnamed protein product [Mus
           musculus] gi|12836332|dbj|BAB23609.1| unnamed protein
           product [Mus musculus]
          Length = 852

 Score =  688 bits (1776), Expect = 0.0
 Identities = 380/889 (42%), Positives = 557/889 (61%), Gaps = 67/889 (7%)

Query: 5   VELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQRED--KGLIGILPVRDAA 62
           +++PSRL +L     VLLPG+ +R    +  +++LV   L +       ++G++P     
Sbjct: 7   IQIPSRLPLLLTHESVLLPGSTMRTSVDTARNLQLVRSRLLKGTSLQSTILGVIP----- 61

Query: 63  ETEVKPVGPTISQDGDTLDQSSKVHGASSDSHKLDAKAQNDVVHWHNRGVAARALHLSRG 122
                          +T D +S                  D+   H  G AA A+ +  G
Sbjct: 62  ---------------NTPDPASDTQ---------------DLPPLHRIGTAALAVQVV-G 90

Query: 123 VEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMNKTEMEQVEHDPDFIMLSR 182
              P     Y +++ GLCRF + ++     Y  A +  L+  +      +   +   LS 
Sbjct: 91  SNWPKPH--YTLLITGLCRFQIVQVLKEKPYPVAEVEQLDRLEEFPNICKSREELGELSE 148

Query: 183 QFKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDAK 242
           QF   A++L+ +L+       + + LL+ +P   L DI  +    S +E+L +LD+V  +
Sbjct: 149 QFYRYAVQLVEMLDMSVPAVAKLRRLLDNLPREALPDILTSIIRTSNKEKLQILDAVSLE 208

Query: 243 LRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG-----DND 297
            R      L+ R ++ +    K+ QK         K  +  + +R I    G     + +
Sbjct: 209 DRFKMTIPLLVRQIEGL----KLLQKTRKPKQDDDKRVIAIRPIRRIPHIPGTLEDEEEE 264

Query: 298 DDEDDLAALERKMQSAGMPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLPWQK 357
           +D DD+  LE+K++++ MP+   K   +E++RLKKM    P Y+ +R YL+L+ +LPW K
Sbjct: 265 EDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVELPWNK 324

Query: 358 ASEEHEMDLKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 417
           ++ +  +D+++A+  LD+DHY + K+K+R++EYLAVR+LK + +GP+LCFVGPPGVGKTS
Sbjct: 325 STTDR-LDIRAARILLDNDHYAMEKLKRRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTS 383

Query: 418 LASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLLDE 477
           +  S+A  L R+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK V V NPV LLDE
Sbjct: 384 VGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDE 443

Query: 478 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQQIPPPLLD 537
           +DK G  ++GDPA+ALLEVLDPEQN  F DHYLNV FDLS+V+F+ATAN    IPP LLD
Sbjct: 444 VDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTTATIPPALLD 503

Query: 538 RMEVIELPGYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQRYTREAGVRN 597
           RME+I++PGYT EEK++IA +HLIP+ L+QHGL+ + +QIP+     +I RYTREAGVR+
Sbjct: 504 RMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQHTTLAIITRYTREAGVRS 563

Query: 598 LERNLASLARAAAVRVAEQEQVVPLNKEVQGLTTPLLENRLTDGAEVEMEVIPMDVNSRD 657
           L+R   ++ RA AV+VAE +     +KE +     L  + + DG   +  V+  D     
Sbjct: 564 LDRKFGAICRAVAVKVAEGQ-----HKEAK-----LDRSDVADGEGCKEHVLE-DAKPES 612

Query: 658 ISNTFRIT----SPLVVNEAILEKVLGPPKFDGREAAERVAAPGICVGLVWTTFGGEVQF 713
           IS+T  +      P++++   L+ +LGPP ++  E +ER++ PG+ +GL WT  GG++ F
Sbjct: 613 ISDTADLALPPEMPILIDSHALKDILGPPLYE-LEVSERLSQPGVAIGLAWTPLGGKIMF 671

Query: 714 VEATEMVGKGDLHLTGQLGDVIKESAQIALTWVRARAADLRLASAEG-INLLEGRDIHIH 772
           VEA+ M G+G L LTGQLGDV+KESA +A++W+R+ A    L +A G  +LL+  DIH+H
Sbjct: 672 VEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYHLTNAFGSFDLLDNTDIHLH 731

Query: 773 FPAGAIPKDGPSAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAH 832
           FPAGA+ KDGPSAGVT+VT L SLFS + VRSD AMTGE+TLRGLVLPVGGIKDK+LAAH
Sbjct: 732 FPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAH 791

Query: 833 RCGIKRVIIPERNLKDLVEVPSSVLVNLEILLAKRMEDVLEQALEGGCP 881
           R G+K++IIP+RN KDL E+PS+V  +L  + A  +++VL  A +GG P
Sbjct: 792 RAGLKQIIIPQRNEKDLEEIPSNVRQDLSFVTASCLDEVLNAAFDGGFP 840


>ref|XP_535313.1| PREDICTED: similar to peroxisomal lon protease [Canis familiaris]
          Length = 850

 Score =  687 bits (1773), Expect = 0.0
 Identities = 384/886 (43%), Positives = 554/886 (62%), Gaps = 67/886 (7%)

Query: 5   VELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQRED--KGLIGILPVRDAA 62
           +++P RL +L     VLLPG+ +R    S  +++LV   L +       ++G++P     
Sbjct: 7   IQIPRRLPLLLTNEGVLLPGSTMRTSVDSARNLQLVRSRLLKGTSLQSTILGVIP----- 61

Query: 63  ETEVKPVGPTISQDGDTLDQSSKVHGASSDSHKLDAKAQNDVVHWHNRGVAARALHLSRG 122
                          +T D +S            DA+   D+   H  G AA A+ +  G
Sbjct: 62  ---------------NTPDPAS------------DAQ---DLPPLHRIGTAALAVQVV-G 90

Query: 123 VEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMNKTEMEQVEHDPDFIMLSR 182
              P     Y +++ GLCRF + ++     Y  A +  L+  +      +   +   LS 
Sbjct: 91  SNWPKPH--YTLLITGLCRFQIVQVLKEKPYPVAEVEQLDRLEEFPNTCKTREELGELSE 148

Query: 183 QFKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDAK 242
           QF   A++L+ +L+       + + LL+++P   L DI  +    S +E+L +LD+V  +
Sbjct: 149 QFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPREALPDILTSIIRTSNKEKLQILDAVSLE 208

Query: 243 LRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG-----DND 297
            R      L+ R ++ +    K+ QK         K  +  + +R I    G     D D
Sbjct: 209 ERFKMTIPLLVRQIEGL----KLLQKTRKHKQDDDKRVIAIRPIRRITHIPGTLEDDDED 264

Query: 298 DDEDDLAALERKMQSAGMPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLPWQK 357
           +D DD+  LERK++++ MP+   K   +E++RLKKM    P Y+ +R YL+L+ +LPW K
Sbjct: 265 EDNDDIVMLERKIRTSSMPEQAHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVELPWNK 324

Query: 358 ASEEHEMDLKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 417
           ++ +  +D+++A+  LD+DHY + K+K+R++EYLAVR+LK + +GP+LCFVGPPGVGKTS
Sbjct: 325 STTDR-LDIRAARILLDNDHYAMEKLKKRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTS 383

Query: 418 LASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLLDE 477
           +  S+A  L R+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK V V NPV LLDE
Sbjct: 384 VGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDE 443

Query: 478 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQQIPPPLLD 537
           +DK G  ++GDPA+ALLEVLDPEQN  F DHYLNV FDLS+V+F+ATAN    IPP LLD
Sbjct: 444 VDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTTATIPPALLD 503

Query: 538 RMEVIELPGYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQRYTREAGVRN 597
           RME+I++PGYT EEK++IA +HLIP+ L+QHGL+ + +QIP+     +I RYTREAGVR+
Sbjct: 504 RMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQVTTLDIITRYTREAGVRS 563

Query: 598 LERNLASLARAAAVRVAEQEQVVPLNKEVQGLTTPLLENRLTDGAEVEMEVIPMDVNSRD 657
           L+R   ++ RA AV+VAE +     +KE +      L+       E   E I  D     
Sbjct: 564 LDRKFGAICRAVAVKVAEGQ-----HKEAK------LDRYDVAEGEGGREHILEDAKPES 612

Query: 658 ISNTFRIT----SPLVVNEAILEKVLGPPKFDGREAAERVAAPGICVGLVWTTFGGEVQF 713
           IS+T  +      P++++   L+ +LGPP ++  E +ER++ PG+ +GL WT  GGE+ F
Sbjct: 613 ISDTTDLALPPEMPILIDFHALKDILGPPMYE-MEVSERLSQPGVAIGLAWTPLGGEIMF 671

Query: 714 VEATEMVGKGDLHLTGQLGDVIKESAQIALTWVRARAADLRLASAEGINLLEGRDIHIHF 773
           VEA+ M G+G L LTGQLGDV+KESA +A++W+R+ A    L + +  +LL+  DIH+HF
Sbjct: 672 VEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYHLTNGD-FDLLDNTDIHLHF 730

Query: 774 PAGAIPKDGPSAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHR 833
           PAGA+ KDGPSAGVT+VT L SLFS + VRSD AMTGE+TLRGLVLPVGGIKDK+LAAHR
Sbjct: 731 PAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHR 790

Query: 834 CGIKRVIIPERNLKDLVEVPSSVLVNLEILLAKRMEDVLEQALEGG 879
            G+KRVIIP+RN KDL E+P +V  +L  + A  +++VL  A +GG
Sbjct: 791 AGLKRVIIPQRNEKDLEEIPGNVRQDLSFVTASCLDEVLNAAFDGG 836


>emb|CAD68987.1| peroxisomal lon protease [Homo sapiens] gi|62740210|gb|AAH93912.1|
           Peroxisomal lon protease [Homo sapiens]
           gi|62739604|gb|AAH93910.1| Peroxisomal lon protease
           [Homo sapiens] gi|31377667|ref|NP_113678.2| peroxisomal
           lon protease [Homo sapiens]
          Length = 852

 Score =  681 bits (1757), Expect = 0.0
 Identities = 383/887 (43%), Positives = 555/887 (62%), Gaps = 67/887 (7%)

Query: 5   VELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQRED--KGLIGILPVRDAA 62
           +++PSRL +L     VLLPG+ +R    S  +++LV   L +       ++G++P     
Sbjct: 7   IQIPSRLPLLLTHEGVLLPGSTMRTSVDSARNLQLVRSRLLKGTSLQSTILGVIP----- 61

Query: 63  ETEVKPVGPTISQDGDTLDQSSKVHGASSDSHKLDAKAQNDVVHWHNRGVAARALHLSRG 122
                          +T D +S            DA+   D+   H  G AA A+ +  G
Sbjct: 62  ---------------NTPDPAS------------DAQ---DLPPLHRIGTAALAVQVV-G 90

Query: 123 VEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMNKTEMEQVEHDPDFIMLSR 182
              P     Y +++ GLCRF + ++     Y  A +  L+  +      +   +   LS 
Sbjct: 91  SNWPKPH--YTLLITGLCRFQIVQVLKEKPYPIAEVEQLDRLEEFPNTCKMREELGELSE 148

Query: 183 QFKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDAK 242
           QF   A++L+ +L+       + + LL+++P   L DI  +    S +E+L +LD+V  +
Sbjct: 149 QFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPREALPDILTSIIRTSNKEKLQILDAVSLE 208

Query: 243 LRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG-----DND 297
            R      L+ R ++ +    K+ QK         K  +  + +R I    G     D D
Sbjct: 209 ERFKMTIPLLVRQIEGL----KLLQKTRKPKQDDDKRVIAIRPIRRITHISGTLEDEDED 264

Query: 298 DDEDDLAALERKMQSAGMPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLPWQK 357
           +D DD+  LE+K++++ MP+   K   +E++RLKKM    P Y+ +R YL+L+ +LPW K
Sbjct: 265 EDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVELPWNK 324

Query: 358 ASEEHEMDLKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 417
           ++ +  +D+++A+  LD+DHY + K+K+R++EYLAVR+LK + +GP+LCFVGPPGVGKTS
Sbjct: 325 STTDR-LDIRAARILLDNDHYAMEKLKKRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTS 383

Query: 418 LASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLLDE 477
           +  S+A  L R+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK V V NPV LLDE
Sbjct: 384 VGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDE 443

Query: 478 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQQIPPPLLD 537
           +DK G  ++GDPA+ALLEVLDPEQN  F DHYLNV FDLS+V+F+ATAN    IP  LLD
Sbjct: 444 VDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTTATIPAALLD 503

Query: 538 RMEVIELPGYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQRYTREAGVRN 597
           RME+I++PGYT EEK++IA +HLIP+ L+QHGL+ + +QIP+     +I RYTREAGVR+
Sbjct: 504 RMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQVTTLDIITRYTREAGVRS 563

Query: 598 LERNLASLARAAAVRVAEQEQVVPLNKEVQGLTTPLLENRLTDGAEVEMEVIPMDVNSRD 657
           L+R L ++ RA AV+VAE +     +KE +      L+       E   E I  D     
Sbjct: 564 LDRKLGAICRAVAVKVAEGQ-----HKEAK------LDRSDVTEREGCREHILEDEKPES 612

Query: 658 ISNTFRIT----SPLVVNEAILEKVLGPPKFDGREAAERVAAPGICVGLVWTTFGGEVQF 713
           IS+T  +      P++++   L+ +LGPP ++  E ++R++ PG+ +GL WT  GGE+ F
Sbjct: 613 ISDTTDLALPPEMPILIDFHALKDILGPPMYE-MEVSQRLSQPGVAIGLAWTPLGGEIMF 671

Query: 714 VEATEMVGKGDLHLTGQLGDVIKESAQIALTWVRARAADLRLASAEG-INLLEGRDIHIH 772
           VEA+ M G+G L LTGQLGDV+KESA +A++W+R+ A   +L +A G  +LL+  DIH+H
Sbjct: 672 VEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYQLTNAFGSFDLLDNTDIHLH 731

Query: 773 FPAGAIPKDGPSAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAH 832
           FPAGA+ KDGPSAGVT+VT L SLFS + VRSD AMTGE+TLRGLVLPVGGIKDK+LAAH
Sbjct: 732 FPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAH 791

Query: 833 RCGIKRVIIPERNLKDLVEVPSSVLVNLEILLAKRMEDVLEQALEGG 879
           R G+K+VIIP RN KDL  +P +V  +L  + A  +++VL  A +GG
Sbjct: 792 RAGLKQVIIPRRNEKDLEGIPGNVRQDLSFVTASCLDEVLNAAFDGG 838


>dbj|BAC11201.1| unnamed protein product [Homo sapiens]
          Length = 852

 Score =  680 bits (1755), Expect = 0.0
 Identities = 383/887 (43%), Positives = 554/887 (62%), Gaps = 67/887 (7%)

Query: 5   VELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQRED--KGLIGILPVRDAA 62
           +++PSRL +L     VLLPG+ +R    S  +++LV   L +       ++G++P     
Sbjct: 7   IQIPSRLPLLLTHEGVLLPGSTMRTSVDSARNLQLVRSRLLKGTSLQSTILGVIP----- 61

Query: 63  ETEVKPVGPTISQDGDTLDQSSKVHGASSDSHKLDAKAQNDVVHWHNRGVAARALHLSRG 122
                          +T D +S            DA+   D+   H  G AA A+ +  G
Sbjct: 62  ---------------NTPDPAS------------DAQ---DLPPLHRIGTAALAVQVV-G 90

Query: 123 VEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMNKTEMEQVEHDPDFIMLSR 182
              P     Y +++ GLCRF + ++     Y  A +  L+  +      +   +   LS 
Sbjct: 91  SNWPKPH--YTLLITGLCRFQIVQVLKEKPYPIAEVEQLDRLEEFPNTCKMREELGELSE 148

Query: 183 QFKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDAK 242
           QF   A++L+ +L+       + + LL+++P   L DI  +    S +E+L +LD+V  +
Sbjct: 149 QFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPREALPDILTSIIRTSNKEKLQILDAVSLE 208

Query: 243 LRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG-----DND 297
            R      L+ R ++ +    K+ QK         K  +  + +R I    G     D D
Sbjct: 209 ERFKMTIPLLVRQIEGL----KLLQKTRKPKQDDDKRVIAIRPIRRITHISGTLEDEDED 264

Query: 298 DDEDDLAALERKMQSAGMPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLPWQK 357
           +D DD+  LE+K++++ MP+   K   +E++RLKKM    P Y+ +R YL+L+ +LPW K
Sbjct: 265 EDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVELPWNK 324

Query: 358 ASEEHEMDLKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 417
           ++ +  +D+++A+  LD+DHY + K+K+R++EYLAVR+LK + +GP+LCFVGPPGVGKTS
Sbjct: 325 STTDR-LDIRAARILLDNDHYAMEKLKKRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTS 383

Query: 418 LASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLLDE 477
           +  S+A  L R+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK V V NPV LLDE
Sbjct: 384 VGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDE 443

Query: 478 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQQIPPPLLD 537
           +DK G  ++GDPA+ALLEVLDPEQN  F DHYLNV FDLS+V+F+ATAN    IP  LLD
Sbjct: 444 VDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTTATIPAALLD 503

Query: 538 RMEVIELPGYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQRYTREAGVRN 597
           RME+I++PGYT EEK++IA +HLIP+ L+QHGL+ + +QIP+     +I RYTREAGVR+
Sbjct: 504 RMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQVTTLDIITRYTREAGVRS 563

Query: 598 LERNLASLARAAAVRVAEQEQVVPLNKEVQGLTTPLLENRLTDGAEVEMEVIPMDVNSRD 657
           L+R L ++ RA AV+VAE +     +KE +      L+       E   E I  D     
Sbjct: 564 LDRKLGAICRAVAVKVAEGQ-----HKEAK------LDRSDVTEREGCREHILEDEKPES 612

Query: 658 ISNTFRIT----SPLVVNEAILEKVLGPPKFDGREAAERVAAPGICVGLVWTTFGGEVQF 713
           IS+T  +      P+ ++   L+ +LGPP ++  E ++R++ PG+ +GL WT  GGE+ F
Sbjct: 613 ISDTTDLALPPEMPIFIDFHALKDILGPPMYE-MEVSQRLSQPGVAIGLAWTPLGGEIMF 671

Query: 714 VEATEMVGKGDLHLTGQLGDVIKESAQIALTWVRARAADLRLASAEG-INLLEGRDIHIH 772
           VEA+ M G+G L LTGQLGDV+KESA +A++W+R+ A   +L +A G  +LL+  DIH+H
Sbjct: 672 VEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYQLTNAFGSFDLLDNTDIHLH 731

Query: 773 FPAGAIPKDGPSAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAH 832
           FPAGA+ KDGPSAGVT+VT L SLFS + VRSD AMTGE+TLRGLVLPVGGIKDK+LAAH
Sbjct: 732 FPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAH 791

Query: 833 RCGIKRVIIPERNLKDLVEVPSSVLVNLEILLAKRMEDVLEQALEGG 879
           R G+K+VIIP RN KDL  +P +V  +L  + A  +++VL  A +GG
Sbjct: 792 RAGLKQVIIPRRNEKDLEGIPGNVRQDLSFVTASCLDEVLNAAFDGG 838


>emb|CAH92585.1| hypothetical protein [Pongo pygmaeus]
          Length = 852

 Score =  677 bits (1747), Expect = 0.0
 Identities = 380/887 (42%), Positives = 554/887 (61%), Gaps = 67/887 (7%)

Query: 5   VELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQRED--KGLIGILPVRDAA 62
           +++PSRL +L     VLLPG+ +R    S  +++LV   L +       ++G++P     
Sbjct: 7   IQIPSRLPLLLTHEGVLLPGSTMRTSVDSARNLQLVRSRLLKGTSLQSTILGVIP----- 61

Query: 63  ETEVKPVGPTISQDGDTLDQSSKVHGASSDSHKLDAKAQNDVVHWHNRGVAARALHLSRG 122
                          +T D +S            DA+   D+   H  G AA A+ +  G
Sbjct: 62  ---------------NTPDPAS------------DAQ---DLPPLHRIGTAALAVQVV-G 90

Query: 123 VEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMNKTEMEQVEHDPDFIMLSR 182
              P     Y +++ GLCRF + ++     Y  A +  L+  +      +   +   LS 
Sbjct: 91  SNWPKPH--YTLLITGLCRFQIVQVLKEKPYPIAEVEQLDRLEEFPSTCKMREELGELSE 148

Query: 183 QFKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDAK 242
           QF   A++L+ +L+       + + LL+++P   L DI  +    S +E+L +LD+V  +
Sbjct: 149 QFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPREALPDILTSIIRTSNKEKLQILDAVSLE 208

Query: 243 LRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG-----DND 297
            R      L+ R ++ +    K+ QK         K  +  + +R I    G     D D
Sbjct: 209 ERFKMTIPLLVRQIEGL----KLLQKTRKPKQDDDKRVIAIRPIRRITHISGTLEDEDED 264

Query: 298 DDEDDLAALERKMQSAGMPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLPWQK 357
           +D DD+  LE++++++ MP+   K   +E++RLKKM    P Y+ +R YL+L+ +LPW K
Sbjct: 265 EDNDDIVMLEKEIRTSSMPEQAHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVELPWNK 324

Query: 358 ASEEHEMDLKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 417
           ++ +  +D+++A+  LD+DHY + K+K+R++EYL VR+LK + +GP+LCFVGPPGVGKTS
Sbjct: 325 STTDR-LDIRAARILLDNDHYAMEKLKKRVLEYLVVRQLKNNLKGPILCFVGPPGVGKTS 383

Query: 418 LASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLLDE 477
           +   +A  L R+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK V V NPV LLDE
Sbjct: 384 VGRLVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDE 443

Query: 478 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQQIPPPLLD 537
           +DK G  ++GDPA+ALLEVLDPEQN  F DHYLNV FDLS+V+F+ATAN    IP  LLD
Sbjct: 444 VDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSRVLFIATANTTATIPAALLD 503

Query: 538 RMEVIELPGYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQRYTREAGVRN 597
           RME+I++PGYT EEK++IA +HLIP+ L+QHGL+ + +QIP+     +I RYTREAGVR+
Sbjct: 504 RMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQVTTLDIITRYTREAGVRS 563

Query: 598 LERNLASLARAAAVRVAEQEQVVPLNKEVQGLTTPLLENRLTDGAEVEMEVIPMDVNSRD 657
           L+R L ++ RA AV+VAE +     +KE +      L+       E   E I  D     
Sbjct: 564 LDRKLGAICRAVAVKVAEGQ-----HKEAK------LDRSDVTEREGCREHILEDEKPES 612

Query: 658 ISNTFRIT----SPLVVNEAILEKVLGPPKFDGREAAERVAAPGICVGLVWTTFGGEVQF 713
           IS+T  +      P++++   L+ +LGPP ++  E ++R++ PG+ +GL WT  GGE+ F
Sbjct: 613 ISDTTDLALPPEMPILIDFHALKDILGPPMYE-MEVSQRLSQPGVAIGLAWTPLGGEIMF 671

Query: 714 VEATEMVGKGDLHLTGQLGDVIKESAQIALTWVRARAADLRLASAEG-INLLEGRDIHIH 772
           VEA+ M G+G L LTGQLGDV+KESA +A++W+R+ A   +L +A G  +LL+  DIH+H
Sbjct: 672 VEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYQLTNAFGSFDLLDNTDIHLH 731

Query: 773 FPAGAIPKDGPSAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAH 832
           FPAGA+ KDGPSAGVT+VT L SLFS++ VRSD AMTGE+TLRGLVLPVGGIKDK+LAAH
Sbjct: 732 FPAGAVTKDGPSAGVTIVTCLASLFSERLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAH 791

Query: 833 RCGIKRVIIPERNLKDLVEVPSSVLVNLEILLAKRMEDVLEQALEGG 879
           R G+K+VIIP RN KDL  +P +V  +L  + A  +++VL  A +GG
Sbjct: 792 RAGLKQVIIPRRNEKDLEGIPGNVRQDLSFVTASCLDEVLNAAFDGG 838


>emb|CAD38889.1| hypothetical protein [Homo sapiens]
          Length = 715

 Score =  655 bits (1691), Expect = 0.0
 Identities = 344/710 (48%), Positives = 485/710 (67%), Gaps = 27/710 (3%)

Query: 180 LSRQFKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSV 239
           LS QF   A++L+ +L+       + + LL+++P   L DI  +    S +E+L +LD+V
Sbjct: 9   LSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPREALPDILTSIIRTSNKEKLQILDAV 68

Query: 240 DAKLRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG----- 294
             + R      L+ R ++ +    K+ QK         K  +  + +R I    G     
Sbjct: 69  SLEERFKMTIPLLVRQIEGL----KLLQKTRKPKQDDDKRVIAIRPIRRITHISGTLEDE 124

Query: 295 DNDDDEDDLAALERKMQSAGMPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLP 354
           D D+D DD+  LE+K++++ MP+   K   +E++RLKKM    P Y+ +R YL+L+ +LP
Sbjct: 125 DEDEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVELP 184

Query: 355 WQKASEEHEMDLKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 414
           W K++ +  +D+++A+  LD+DHY + K+K+R++EYLAVR+LK + +GP+LCFVGPPGVG
Sbjct: 185 WNKSTTDR-LDIRAARILLDNDHYAMEKLKKRVLEYLAVRQLKNNLKGPILCFVGPPGVG 243

Query: 415 KTSLASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVML 474
           KTS+  S+A  L R+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK V V NPV L
Sbjct: 244 KTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFL 303

Query: 475 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQQIPPP 534
           LDE+DK G  ++GDPA+ALLEVLDPEQN  F DHYLNV FDLS+V+F+ATAN    IP  
Sbjct: 304 LDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTTATIPAA 363

Query: 535 LLDRMEVIELPGYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQRYTREAG 594
           LLDRME+I++PGYT EEK++IA +HLIP+ L+QHGL+ + +QIP+     +I RYTREAG
Sbjct: 364 LLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQVTTLDIITRYTREAG 423

Query: 595 VRNLERNLASLARAAAVRVAEQEQVVPLNKEVQGLTTPLLENRLTDGAEVEMEVIPMDVN 654
           VR+L+R L ++ RA AV+VAE +     +KE +      L+       E   E I  D  
Sbjct: 424 VRSLDRKLGAICRAVAVKVAEGQ-----HKEAK------LDRSDVTEREGCREHILEDEK 472

Query: 655 SRDISNTFRIT----SPLVVNEAILEKVLGPPKFDGREAAERVAAPGICVGLVWTTFGGE 710
              IS+T  +      P++++   L+ +LGPP ++  E ++R++ PG+ +GL WT  GGE
Sbjct: 473 PESISDTTDLALPPEMPILIDFHALKDILGPPMYE-MEVSQRLSQPGVAIGLAWTPLGGE 531

Query: 711 VQFVEATEMVGKGDLHLTGQLGDVIKESAQIALTWVRARAADLRLASAEG-INLLEGRDI 769
           + FVEA+ M G+G L LTGQLGDV+KESA +A++W+R+ A   +L +A G  +LL+  DI
Sbjct: 532 IMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYQLTNAFGSFDLLDNTDI 591

Query: 770 HIHFPAGAIPKDGPSAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKIL 829
           H+HFPAGA+ KDGPSAGVT+VT L SLFS + VRSD AMTGE+TLRGLVLPVGGIKDK+L
Sbjct: 592 HLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVL 651

Query: 830 AAHRCGIKRVIIPERNLKDLVEVPSSVLVNLEILLAKRMEDVLEQALEGG 879
           AAHR G+K+VIIP RN KDL  +P +V  +L  + A  +++VL  A +GG
Sbjct: 652 AAHRAGLKQVIIPRRNEKDLEGIPGNVRQDLSFVTASCLDEVLNAAFDGG 701


>ref|XP_214655.3| PREDICTED: similar to RIKEN cDNA 1300002A08 [Rattus norvegicus]
          Length = 983

 Score =  644 bits (1661), Expect = 0.0
 Identities = 349/777 (44%), Positives = 500/777 (63%), Gaps = 44/777 (5%)

Query: 123 VEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMNKTEMEQVEHDPDFIMLSR 182
           V+ P     Y+V+L      SV        Y   R S +E            P    L  
Sbjct: 217 VQAPCAFNCYVVLLPLAWTCSV-------VYRHCRSSCVETVLQTCSPPRSHPVAAFLQE 269

Query: 183 QFKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDAK 242
             + ++  L+ +L+       + + LL+++P   L DI  +    S +E+L +LD+V  +
Sbjct: 270 WQRVSSHRLVEMLDMSVPAVAKLRRLLDSLPREALPDILTSIIRTSNKEKLQILDAVSLE 329

Query: 243 LRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG-----DND 297
            R      L+ R ++ +    K+ QK         K  +  + +R I    G     + +
Sbjct: 330 DRFKMTIPLLVRQIEGL----KLLQKTRKPKQDDDKRVIAIRPIRRITHIPGALEDEEEE 385

Query: 298 DDEDDLAALERKMQSAGMPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLPWQK 357
           +D DD+  LE+K++++ MP+   K   +E++RLKKM    P Y+ +R YL+L+ +LPW K
Sbjct: 386 EDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVELPWNK 445

Query: 358 ASEEHEMDLKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 417
           ++ +  +D+++A+  LD+DHY + K+K+R++EYLAVR+LK + +GP+LCFVGPPGVGKTS
Sbjct: 446 STTDR-LDIRAARILLDNDHYAMEKLKRRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTS 504

Query: 418 LASSIAAALDRKFVRISLGGVKDEADIRGH----------RRTYIGSMPGRLIDGLKRVA 467
           +  S+A  L R+F RI+LGGV D++DIRGH          RRTY+GSMPGR+I+GLK V 
Sbjct: 505 VGRSVAKTLGREFHRIALGGVCDQSDIRGHSGLFTGVTDLRRTYVGSMPGRIINGLKTVG 564

Query: 468 VCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANR 527
           V NPV LLDE+DK G  ++GDPA+ALLEVLDPEQN  F DHYLNV FDLS+V+F+ATAN 
Sbjct: 565 VNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANT 624

Query: 528 AQQIPPPLLDRMEVIELPGYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQ 587
              IPP LLDRME+I++PGYT EEK++IA +HLIP+ L+QHGL+ + +QIP+     +I 
Sbjct: 625 TATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQLTTLAIIT 684

Query: 588 RYTREAGVRNLERNLASLARAAAVRVAEQEQVVPLNKEVQGLTTPLLENRLTDGAEVEME 647
           RYTREAGVR+L+R   ++ RA AV+VAE +     +KE +     L  + + DG   +  
Sbjct: 685 RYTREAGVRSLDRKFGAICRAVAVKVAEGQ-----HKEAK-----LDRSDVADGEGCKEH 734

Query: 648 VIPMDVNSRDISNTFRIT----SPLVVNEAILEKVLGPPKFDGREAAERVAAPGICVGLV 703
           V+  D     I +   +      P++++   L+ +LGPP ++  E +ER++ PG+ +GL 
Sbjct: 735 VLE-DAKPESIGDAADLALPPEMPILIDSHALKDILGPPLYE-LEVSERLSQPGVAIGLA 792

Query: 704 WTTFGGEVQFVEATEMVGKGDLHLTGQLGDVIKESAQIALTWVRARAADLRLASAEG-IN 762
           WT  GG++ FVEA+ M G+G L LTGQLGDV+KESA +A++W+R+ A    L +A G  +
Sbjct: 793 WTPLGGKIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYHLTNAFGSFD 852

Query: 763 LLEGRDIHIHFPAGAIPKDGPSAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVG 822
           LL+  DIH+HFPAGA+ KDGPSAGVT+VT L SLFS + VRSD AMTGE+TLRGLVLPVG
Sbjct: 853 LLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVG 912

Query: 823 GIKDKILAAHRCGIKRVIIPERNLKDLVEVPSSVLVNLEILLAKRMEDVLEQALEGG 879
           GIKDK+LAAHR G+K +IIP+RN KDL E+PS+V  +L  + A  +++VL  A +GG
Sbjct: 913 GIKDKVLAAHRAGLKHIIIPQRNEKDLEEIPSNVKQDLSFVTASCLDEVLNAAFDGG 969


>dbj|BAB55278.1| unnamed protein product [Homo sapiens]
          Length = 581

 Score =  610 bits (1573), Expect = e-173
 Identities = 310/579 (53%), Positives = 425/579 (72%), Gaps = 18/579 (3%)

Query: 306 LERKMQSAGMPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLPWQKASEEHEMD 365
           LE+K++++ MP+   K   +E++RLKKM    P Y+ +R YL+L+ +LPW K++ +  +D
Sbjct: 2   LEKKIRTSSMPEQAHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVELPWNKSTTDR-LD 60

Query: 366 LKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAA 425
           +++A+  LD+DHY + K+K+R++EYLAVR+LK + +GP+LCFVGPPGVGKTS+  S+A  
Sbjct: 61  IRAARILLDNDHYAMEKLKKRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKT 120

Query: 426 LDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLLDEIDKTGSDV 485
           L R+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK V V NPV LLDE+DK G  +
Sbjct: 121 LGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSL 180

Query: 486 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQQIPPPLLDRMEVIELP 545
           +GDPA+ALLEVLDPEQN  F DHYLNV FDLS+V+F+ATAN    IP  LLDRME+I++P
Sbjct: 181 QGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTTATIPAALLDRMEIIQVP 240

Query: 546 GYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQRYTREAGVRNLERNLASL 605
           GYT EEK++IA +HLIP+ L+QHGL+ + +QIP+     +I RYTREAGVR+L+R L ++
Sbjct: 241 GYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAI 300

Query: 606 ARAAAVRVAEQEQVVPLNKEVQGLTTPLLENRLTDGAEVEMEVIPMDVNSRDISNTFRIT 665
            RA AV+VAE +     +KE +      L+       E   E I  D     IS+T  + 
Sbjct: 301 CRAVAVKVAEGQ-----HKEAK------LDRSDVTEREGCREHILEDEKPESISDTTDLA 349

Query: 666 ----SPLVVNEAILEKVLGPPKFDGREAAERVAAPGICVGLVWTTFGGEVQFVEATEMVG 721
                P++++   L+ +LGPP ++  E ++R++ PG+ +GL WT  GGE+ FVEA+ M G
Sbjct: 350 LPPEMPILIDFHALKDILGPPMYE-MEVSQRLSQPGVAIGLAWTPLGGEIMFVEASRMDG 408

Query: 722 KGDLHLTGQLGDVIKESAQIALTWVRARAADLRLASAEG-INLLEGRDIHIHFPAGAIPK 780
           +G L LTGQLGDV+KESA +A++W+R+ A   +L +A G  +LL+  DIH+HFPAGA+ K
Sbjct: 409 EGQLTLTGQLGDVMKESAHLAISWLRSNAKKYQLTNAFGSFDLLDNTDIHLHFPAGAVTK 468

Query: 781 DGPSAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHRCGIKRVI 840
           DGPSAGVT+VT L SLFS + VRSD AMTGE+TLRGLVLPVGGIKDK+LAAHR G+K+VI
Sbjct: 469 DGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQVI 528

Query: 841 IPERNLKDLVEVPSSVLVNLEILLAKRMEDVLEQALEGG 879
           IP RN KDL  +P +V  +L  + A  +++VL  A +GG
Sbjct: 529 IPRRNEKDLEGIPGNVRQDLSFVTASCLDEVLNAAFDGG 567


>ref|NP_636358.1| ATP-dependent serine proteinase La [Xanthomonas campestris pv.
           campestris str. ATCC 33913] gi|21112003|gb|AAM40282.1|
           ATP-dependent serine proteinase La [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
           gi|66769565|ref|YP_244327.1| ATP-dependent serine
           proteinase La [Xanthomonas campestris pv. campestris
           str. 8004] gi|66574897|gb|AAY50307.1| ATP-dependent
           serine proteinase La [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 823

 Score =  585 bits (1509), Expect = e-165
 Identities = 351/836 (41%), Positives = 509/836 (59%), Gaps = 74/836 (8%)

Query: 55  ILPVRDAAETEVKPVGPTISQDGD------TLDQSSKVHGASSDSHKLDAKAQNDVVHWH 108
           +LP+RD        +   + +D         ++   ++   +  S + D  A  D+   +
Sbjct: 13  VLPLRDVVVFPHMVIPLFVGRDKSMRALEKAMEADKRILLVAQKSAETDDPAAGDL---Y 69

Query: 109 NRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMNKTEM 168
             G  A+ L L   ++ P G +   V++EGL R +V +++ +         +L+   TE+
Sbjct: 70  TVGTLAQVLQL---LKLPDGTIK--VLVEGLSRVTVDKVAEQD-------GALQGRGTEV 117

Query: 169 EQVE-HDPDFIMLSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----VHKLADIFV 222
           E  +  +P      R+ +A A  L+S+ EQ  KT  +    LL+T+       +LAD   
Sbjct: 118 EASDAREP------RELEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLADTIA 171

Query: 223 ASFEISFEEQLSMLDSVDAKLRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 282
           A   +   ++  +L+  +   RL     LVD  +   ++ ++I  +V+ Q+ KSQ+E+ L
Sbjct: 172 AHIGVRLADKQRLLEITEIGDRLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYL 231

Query: 283 RQQMRAIKEELGDNDDDEDDLAALERKMQSAGMPQSIWKHAHRELRRLKKMQPQQPGYSS 342
            +QM+AI++ELGD DD   +L  L RK+  AGMP+ +   A  EL +LK+M P     + 
Sbjct: 232 NEQMKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAEAAV 291

Query: 343 SRAYLDLLADLPWQKASEEHEMDLKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARG 402
            R YLD L  +PW+K ++  + DLK AQ+ LD+DHYGL KVK+RI+EYLAV+      +G
Sbjct: 292 VRNYLDWLLGVPWKKRTKVRK-DLKVAQDTLDADHYGLDKVKERILEYLAVQSRVKQMKG 350

Query: 403 PVLCFVGPPGVGKTSLASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 462
           P+LC VGPPGVGKTSL  SIA A +RKFVR+SLGGV+DEA+IRGHRRTY+GSMPGRL+  
Sbjct: 351 PILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYVGSMPGRLVQN 410

Query: 463 LKRVAVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 522
           L +V   NP+ LLDEIDK   D RGDP+SALLEVLDPEQN TFNDHYL V  DLS+V+FV
Sbjct: 411 LNKVGSKNPLFLLDEIDKMSMDFRGDPSSALLEVLDPEQNHTFNDHYLEVDLDLSEVMFV 470

Query: 523 ATANRAQQIPPPLLDRMEVIELPGYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMV 582
           AT+N +  IP PLLDRMEVI +PGYT +EKL IAM++L+P+ +  +GL  E ++I    +
Sbjct: 471 ATSN-SLNIPGPLLDRMEVIRIPGYTEDEKLNIAMRYLVPKQIKANGLKPEEIEIGSDAI 529

Query: 583 QLVIQRYTREAGVRNLERNLASLARAAAVRVAEQEQVVPLNKEVQGLTTPLLENRLTDGA 642
           Q V++ YTRE+GVRNLER +A + R     +A           + G              
Sbjct: 530 QDVVRYYTRESGVRNLEREVAKICRKVVKEIA-----------LAG-------------- 564

Query: 643 EVEMEVIPMDVNSRDISNTFRITSPLVVNEAILEKVLGPPKFD-GREAAERVAAPGICVG 701
                  P     + ++   +  + + V    L+K LG  +FD GR  AE     G+  G
Sbjct: 565 -------PQPAAKKAVAKKAKPKALVTVTSKNLDKYLGVRRFDFGR--AEEENEIGLVTG 615

Query: 702 LVWTTFGGEVQFVEATEMVGKGDLHLTGQLGDVIKESAQIALTWVRARAADLRLASAEGI 761
           L WT  GGE+  +E+T + GKG+L LTGQLG+V+KESA  AL+ VR+RA  L +     +
Sbjct: 616 LAWTEVGGELLQIESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI----DV 671

Query: 762 NLLEGRDIHIHFPAGAIPKDGPSAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPV 821
           + L+ +D+H+H P GA PKDGPSAG+ +VT+LVS+ +K  +R+D AMTGE+TLRG V  +
Sbjct: 672 DFLQKQDVHVHVPDGATPKDGPSAGIAMVTSLVSILTKVPIRADVAMTGEITLRGRVSAI 731

Query: 822 GGIKDKILAAHRCGIKRVIIPERNLKDLVEVPSSVLVNLEILLAKRMEDVLEQALE 877
           GG+K+K+LAA R GI+ V+IP+ N KDL ++P++V  +L+I+  K +++VL+ ALE
Sbjct: 732 GGLKEKLLAALRGGIRTVLIPDENRKDLADIPANVTRDLKIVPVKWIDEVLDLALE 787


>ref|YP_199674.1| ATP-dependent serine proteinase La [Xanthomonas oryzae pv. oryzae
           KACC10331] gi|58425252|gb|AAW74289.1| ATP-dependent
           serine proteinase La [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 850

 Score =  581 bits (1498), Expect = e-164
 Identities = 362/884 (40%), Positives = 523/884 (58%), Gaps = 104/884 (11%)

Query: 1   MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQREDKGLIGILPVRD 60
           MA+S      L +LP R+ V+ P  +I +      S++ +E+ +    DK ++  L  + 
Sbjct: 28  MAQSQPEVLDLPVLPLRDVVVFPHMVIPLFVGRDKSMRALEKAM--EADKRIL--LVAQK 83

Query: 61  AAETEVKPVGPTISQDGDTLDQSSKVHGASSDSHKLDAKAQNDVVHWHNRGVAARALHLS 120
           +AET+                               D  A    V  H  G  A+ L L 
Sbjct: 84  SAETD-------------------------------DPAA----VDLHTVGTLAQVLQL- 107

Query: 121 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMNKTEMEQVE-HDPDFIM 179
             ++ P G +   V++EGL R +V ++  +         +L+   TE+E  +  +P    
Sbjct: 108 --LKLPDGTIK--VLVEGLSRVTVDKVVEQD-------GALQGQGTEVEASDAREP---- 152

Query: 180 LSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----VHKLADIFVASFEISFEEQLS 234
             R+ +A A  L+S+ EQ  KT  +    LL+T+       +LAD       +   ++  
Sbjct: 153 --REVEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLADTIAPHIGVRLADKQR 210

Query: 235 MLDSVDAKLRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG 294
           +L+  D   RL     LVD  +   ++ ++I  +V+ Q+ KSQ+E+ L +QM+AI++ELG
Sbjct: 211 LLEITDIGERLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYLNEQMKAIQKELG 270

Query: 295 DNDDDEDDLAALERKMQSAGMPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLP 354
           D DD   +L  L RK+  AGMP+ +   A  EL +LK+M P     +  R YLD L  +P
Sbjct: 271 DLDDVPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAEAAVVRNYLDWLLGVP 330

Query: 355 WQKASEEHEMDLKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 414
           W+K ++  + DLK A++ LD+DHYGL KVK+RI+EYLAV+      +GP+LC VGPPGVG
Sbjct: 331 WKKRTKVRK-DLKVAEDTLDADHYGLDKVKERILEYLAVQSRVKQMKGPILCLVGPPGVG 389

Query: 415 KTSLASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVML 474
           KTSL  SIA A +RKFVR+SLGG++DEA+IRGHRRTY+GSMPGRL+  L +V   NP+ L
Sbjct: 390 KTSLGQSIAKATNRKFVRMSLGGIRDEAEIRGHRRTYVGSMPGRLVQNLNKVGSKNPLFL 449

Query: 475 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQQIPPP 534
           LDEIDK   D RGDP+SALLEVLDPEQN +FNDHYL V  DLS+V+FVAT+N +  IP P
Sbjct: 450 LDEIDKMSMDFRGDPSSALLEVLDPEQNNSFNDHYLEVDLDLSEVMFVATSN-SLNIPGP 508

Query: 535 LLDRMEVIELPGYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQRYTREAG 594
           LLDRMEVI +PGYT +EKL IAM++L+P+ +  +GL  E ++I    +Q +++ YTRE+G
Sbjct: 509 LLDRMEVIRIPGYTEDEKLNIAMRYLVPKQIKANGLKPEEIEIGGDAIQDIVRYYTRESG 568

Query: 595 VRNLERNLASLARAAAVRVAEQEQVVPLNKEVQGLTTPLLENRLTDGAEVEMEVIPMDVN 654
           VRNLER +A + R     +A           + G                     P    
Sbjct: 569 VRNLEREVAKICRKVVKEIA-----------LAG---------------------PQPAA 596

Query: 655 SRDISNTFRITSPLVVNEAILEKVLGPPKFD-GREAAERVAAPGICVGLVWTTFGGEVQF 713
            + ++   +  + + VN   L+K LG  +FD GR  AE     G+  GL WT  GGE+  
Sbjct: 597 KKAVAKKGKPKALVTVNAKNLDKYLGVRRFDFGR--AEEENEIGLVTGLAWTEVGGELLQ 654

Query: 714 VEATEMVGKGDLHLTGQLGDVIKESAQIALTWVRARAADLRLASAEGINLLEGRDIHIHF 773
           VE+T + GKG+L LTGQLG+V+KESA  AL+ VR+RA  L +     ++ L+ +D+H+H 
Sbjct: 655 VESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI----DVDFLQKQDVHVHV 710

Query: 774 PAGAIPKDGPSAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHR 833
           P GA PKDGPSAG+ +VT+LVS+ +K  +R+D AMTGE+TLRG V  +GG+K+K+LAA R
Sbjct: 711 PDGATPKDGPSAGIAMVTSLVSVLTKVPIRADVAMTGEITLRGRVSAIGGLKEKLLAALR 770

Query: 834 CGIKRVIIPERNLKDLVEVPSSVLVNLEILLAKRMEDVLEQALE 877
            GI+ V+IP  N KDL ++P++V  +L+I+  K +++VL+ ALE
Sbjct: 771 GGIRTVLIPGENRKDLADIPANVTRDLKIVPVKWIDEVLDLALE 814


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.317    0.135    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,425,159,552
Number of Sequences: 2540612
Number of extensions: 59195349
Number of successful extensions: 210065
Number of sequences better than 10.0: 3421
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 2693
Number of HSP's that attempted gapping in prelim test: 205392
Number of HSP's gapped (non-prelim): 5770
length of query: 888
length of database: 863,360,394
effective HSP length: 137
effective length of query: 751
effective length of database: 515,296,550
effective search space: 386987709050
effective search space used: 386987709050
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)