BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0546.13
         (1118 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_568171.1| ubiquitin-specific protease 12 (UBP12) [Arabido...  1917  0.0
gb|AAG42754.1| ubiquitin-specific protease 12 [Arabidopsis thali...  1916  0.0
dbj|BAB11409.1| ubiquitin carboxyl-terminal hydrolase [Arabidops...  1915  0.0
gb|AAO22588.1| putative ubiquitin carboxyl-terminal hydrolase [A...  1912  0.0
gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabi...  1911  0.0
gb|AAF23207.1| putative ubiquitin carboxyl-terminal hydrolase [A...  1904  0.0
ref|XP_476711.1| putative ubiquitin-specific protease [Oryza sat...  1774  0.0
ref|NP_916313.1| putative ubiquitin carboxyl-terminal hydrolase ...  1602  0.0
dbj|BAB17021.1| ubiquitin carboxyl-terminal hydrolase-like prote...  1053  0.0
gb|EAL17783.1| hypothetical protein CNBL2960 [Cryptococcus neofo...   723  0.0
gb|EAK83809.1| hypothetical protein UM02639.1 [Ustilago maydis 5...   707  0.0
gb|EAL85980.1| ubiquitin C-terminal hydrolase (HAUSP), putative ...   654  0.0
emb|CAD11412.1| conserved hypothetical protein [Neurospora crass...   634  e-180
gb|EAA77241.1| hypothetical protein FG07382.1 [Gibberella zeae P...   634  e-180
ref|NP_001019961.1| ubiquitin specific protease 7 (herpes virus-...   628  e-178
ref|XP_592719.1| PREDICTED: similar to ubiquitin specific protea...   627  e-178
emb|CAA96580.1| herpesvirus associated ubiquitin-specific protea...   625  e-177
gb|AAQ82908.1| ubiquitin-specific protease 7 isoform [Homo sapiens]   624  e-177
ref|NP_001003918.1| ubiquitin specific protease 7 [Mus musculus]...   623  e-176
ref|XP_510806.1| PREDICTED: similar to ubiquitin-specific protea...   623  e-176

>ref|NP_568171.1| ubiquitin-specific protease 12 (UBP12) [Arabidopsis thaliana]
          Length = 1116

 Score = 1917 bits (4967), Expect = 0.0
 Identities = 924/1119 (82%), Positives = 1013/1119 (89%), Gaps = 4/1119 (0%)

Query: 1    MTVMTPAPIDQQEDEEMLVPHTDLPENNHQPMEVVAQPEAAPTVESQPVEEPPQSRFTWR 60
            MT+MTP P+DQ EDEEMLVP++DL +   QPMEV     AA TVE+QP E+PP  +FTW 
Sbjct: 1    MTMMTPPPVDQPEDEEMLVPNSDLVDGPAQPMEVTQPETAASTVENQPAEDPPTLKFTWT 60

Query: 61   IDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLPYGWSRYAQF 120
            I NFSR N +K YS+VFVVGGYKWR+LIFPKGNNVD+LSMYLDV+D+ +LPYGWSRYAQF
Sbjct: 61   IPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWSRYAQF 120

Query: 121  SLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVL 180
            SLAVVNQI  +YTVRK+TQHQFNARESDWGFTSFMPL ELYDPSRGYL+NDT++VEAEV 
Sbjct: 121  SLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVA 180

Query: 181  VRRIVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPAG 240
            VR+++DYW+YDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P  
Sbjct: 181  VRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTA 240

Query: 241  SIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 300
            SIPLALQSLFYKLQY+DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
Sbjct: 241  SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 300

Query: 301  VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFDKYVEVEPLE 360
            VVEGTIQ+LFEGHHMNYIECINVD+KSTRKESFYDLQLDVKGC DVYASFDKYVEVE LE
Sbjct: 301  VVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLE 360

Query: 361  GDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD 420
            GDNKYHAE +GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD
Sbjct: 361  GDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD 420

Query: 421  RDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 480
            R+DGKYLSPDADR+VRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
Sbjct: 421  REDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 480

Query: 481  TKRALEEQYGGEEELPQTNPGFNNT-PFKFTKYSNAYMLVYIREADKDKVICNVDEKDIA 539
             KRALEEQYGGEEELPQTNPGFNN  PFKFTKYSNAYMLVYIRE+DKDK+ICNVDEKDIA
Sbjct: 481  LKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA 540

Query: 540  EHLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARNEDLKEQIGKDIYFDLVDHDKVRSFR 599
            EHLR RLKKEQEEKE K++ KA+AHLYTIIKVAR+EDLKEQIGKDIYFDLVDHDKVRSFR
Sbjct: 541  EHLRVRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRSFR 600

Query: 600  VQKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPAEEAQSVGQVREVS 659
            +QKQ  F  FKEEVAKEFG+PVQ QRFW+WAKRQNHTYRPNRPLTP EE Q VGQ+RE S
Sbjct: 601  IQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREAS 660

Query: 660  NKVHNAELKLFLEVELGPDLRPIAPSDKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGK 719
            NK + AELKLFLEVE   DLRPI P +K+K+DILLFFKLYDPEK  L Y GRL VKS+ K
Sbjct: 661  NKANTAELKLFLEVE-HLDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSSSK 719

Query: 720  PSEILTRLNEMAGYDPDEEIGLYEEIKFEPNVMCEPIDKKLTFRASQLEDGDIICFQKAP 779
            P +I  +LNEM G+ PDEEI L+EEIKFEP VMCE +DKK +FR  Q+EDGDIICFQK P
Sbjct: 720  PMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQK-P 778

Query: 780  AMDSEEHVRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLYTYDDVVEKVAQQL 839
             ++ E    YP VPS+LEYV NRQ+V FR+L+KPKED+F LE+S+ +TYDDVVEKVA++L
Sbjct: 779  LVNKEIECLYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKQHTYDDVVEKVAEKL 838

Query: 840  NLDDPSKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEILDIPLPELQ 899
             LDDPSK+RLT HNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYE+LDIPLPELQ
Sbjct: 839  GLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQ 898

Query: 900  GLKTLKVAFYHATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYHKI 959
            GLKTLKVAF+HATK+EVV H IRLPKQSTVGDV+++LKTKVELSHP+AELRLLEVFYHKI
Sbjct: 899  GLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYHKI 958

Query: 960  YKVFPPNEKIETINDQYWTLRAEEVPEEEKNLGPHDRLIHVYHFTKDTSQNQMQIQNFGE 1019
            YK+FP  E+IE INDQYWTLRAEE+PEEEKN+GP+DRLI VYHF K+T QNQ Q+QNFGE
Sbjct: 959  YKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQ-QVQNFGE 1017

Query: 1020 PFFLVIREGETLTEIKVRIQKKLQVPDDEFEKWKFAFFALGRPEYLQDSDIVSNRFQRRD 1079
            PFFLVI EGETL EIK RIQKKL V D++F KWKFAF ++GRPEYLQD+D+V NRFQRRD
Sbjct: 1018 PFFLVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDTDVVYNRFQRRD 1077

Query: 1080 VYGAWEQYLGLEHTDNAPKRSYAVNQNRHTFEKPVKIYN 1118
            VYGA+EQYLGLEH D  PKR+YA NQNRH +EKPVKIYN
Sbjct: 1078 VYGAFEQYLGLEHADTTPKRAYAANQNRHAYEKPVKIYN 1116


>gb|AAG42754.1| ubiquitin-specific protease 12 [Arabidopsis thaliana]
          Length = 1116

 Score = 1916 bits (4963), Expect = 0.0
 Identities = 923/1119 (82%), Positives = 1012/1119 (89%), Gaps = 4/1119 (0%)

Query: 1    MTVMTPAPIDQQEDEEMLVPHTDLPENNHQPMEVVAQPEAAPTVESQPVEEPPQSRFTWR 60
            MT+MTP P+DQ EDEEMLVP++DL +   QPMEV     AA TVE+QP E+PP  +FTW 
Sbjct: 1    MTMMTPPPVDQPEDEEMLVPNSDLVDGPAQPMEVTQPETAASTVENQPAEDPPTLKFTWT 60

Query: 61   IDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLPYGWSRYAQF 120
            I NFSR N +K YS+VFVVGGYKWR+LIFPKGNNVD+LSMYLDV+D+ +LPYGWSRYAQF
Sbjct: 61   IPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWSRYAQF 120

Query: 121  SLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVL 180
            SLAVVNQI  +YTVRK+TQHQFNARESDWGFTSFMPL ELYDPSRGYL+NDT++VEAEV 
Sbjct: 121  SLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVA 180

Query: 181  VRRIVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPAG 240
            VR+++DYW+YDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P  
Sbjct: 181  VRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTA 240

Query: 241  SIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 300
            SIPLALQSLFYKLQY+DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
Sbjct: 241  SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 300

Query: 301  VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFDKYVEVEPLE 360
            VVEGTIQ+LFEGHHMNYIECINVD+KSTRKESFYDLQLDVKGC DVYASFDKYVEVE LE
Sbjct: 301  VVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLE 360

Query: 361  GDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD 420
            GDNKYHAE +GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD
Sbjct: 361  GDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD 420

Query: 421  RDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 480
            R+DGKYLSPDADR+VRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
Sbjct: 421  REDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 480

Query: 481  TKRALEEQYGGEEELPQTNPGFNNT-PFKFTKYSNAYMLVYIREADKDKVICNVDEKDIA 539
             KRALEEQYGGEEELPQTNPGFNN  PFKFTKYSNAYMLVYIRE+DKDK+ICNVDEKDIA
Sbjct: 481  LKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA 540

Query: 540  EHLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARNEDLKEQIGKDIYFDLVDHDKVRSFR 599
            EHLR RLKKEQEEKE K++ KA+AHLYTIIKVAR+EDLKEQIGKDIYFDLVDHDKVRSFR
Sbjct: 541  EHLRVRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRSFR 600

Query: 600  VQKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPAEEAQSVGQVREVS 659
            +QKQ  F  FKEEVAKEFG+PVQ QRFW+WAKRQNHTYRPNRPLTP EE Q VGQ+RE S
Sbjct: 601  IQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREAS 660

Query: 660  NKVHNAELKLFLEVELGPDLRPIAPSDKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGK 719
            NK + AELKLFLEVE   DLRPI P +K+K+DILLFFKLYDPEK  L Y GRL VKS+ K
Sbjct: 661  NKANTAELKLFLEVE-HLDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSSSK 719

Query: 720  PSEILTRLNEMAGYDPDEEIGLYEEIKFEPNVMCEPIDKKLTFRASQLEDGDIICFQKAP 779
            P +I  +LNEM G+ PDEEI L+EEIKFEP VMCE +DKK +FR  Q+EDGDIICFQK P
Sbjct: 720  PMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQK-P 778

Query: 780  AMDSEEHVRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLYTYDDVVEKVAQQL 839
             ++ E    YP VPS+LEYV NRQ+V FR+L+KPKED+F LE+S+ +TYDDVVEKVA++L
Sbjct: 779  LVNKEIECLYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKQHTYDDVVEKVAEKL 838

Query: 840  NLDDPSKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEILDIPLPELQ 899
              DDPSK+RLT HNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYE+LDIPLPELQ
Sbjct: 839  GFDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQ 898

Query: 900  GLKTLKVAFYHATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYHKI 959
            GLKTLKVAF+HATK+EVV H IRLPKQSTVGDV+++LKTKVELSHP+AELRLLEVFYHKI
Sbjct: 899  GLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYHKI 958

Query: 960  YKVFPPNEKIETINDQYWTLRAEEVPEEEKNLGPHDRLIHVYHFTKDTSQNQMQIQNFGE 1019
            YK+FP  E+IE INDQYWTLRAEE+PEEEKN+GP+DRLI VYHF K+T QNQ Q+QNFGE
Sbjct: 959  YKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQ-QVQNFGE 1017

Query: 1020 PFFLVIREGETLTEIKVRIQKKLQVPDDEFEKWKFAFFALGRPEYLQDSDIVSNRFQRRD 1079
            PFFLVI EGETL EIK RIQKKL V D++F KWKFAF ++GRPEYLQD+D+V NRFQRRD
Sbjct: 1018 PFFLVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDTDVVYNRFQRRD 1077

Query: 1080 VYGAWEQYLGLEHTDNAPKRSYAVNQNRHTFEKPVKIYN 1118
            VYGA+EQYLGLEH D  PKR+YA NQNRH +EKPVKIYN
Sbjct: 1078 VYGAFEQYLGLEHADTTPKRAYAANQNRHAYEKPVKIYN 1116


>dbj|BAB11409.1| ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana]
          Length = 1126

 Score = 1915 bits (4962), Expect = 0.0
 Identities = 925/1128 (82%), Positives = 1014/1128 (89%), Gaps = 12/1128 (1%)

Query: 1    MTVMTPAPID---------QQEDEEMLVPHTDLPENNHQPMEVVAQPEAAPTVESQPVEE 51
            MT+MTP P+D         Q EDEEMLVP++DL +   QPMEV     AA TVE+QP E+
Sbjct: 1    MTMMTPPPVDVISDFYVLQQPEDEEMLVPNSDLVDGPAQPMEVTQPETAASTVENQPAED 60

Query: 52   PPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLP 111
            PP  +FTW I NFSR N +K YS+VFVVGGYKWR+LIFPKGNNVD+LSMYLDV+D+ +LP
Sbjct: 61   PPTLKFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLP 120

Query: 112  YGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLND 171
            YGWSRYAQFSLAVVNQI  +YTVRK+TQHQFNARESDWGFTSFMPL ELYDPSRGYL+ND
Sbjct: 121  YGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVND 180

Query: 172  TLVVEAEVLVRRIVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMP 231
            T++VEAEV VR+++DYW+YDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMP
Sbjct: 181  TVLVEAEVAVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMP 240

Query: 232  TTENDMPAGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCE 291
            TTEND P  SIPLALQSLFYKLQY+DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCE
Sbjct: 241  TTENDAPTASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCE 300

Query: 292  KLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFD 351
            KLEDKMKGTVVEGTIQ+LFEGHHMNYIECINVD+KSTRKESFYDLQLDVKGC DVYASFD
Sbjct: 301  KLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFD 360

Query: 352  KYVEVEPLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRY 411
            KYVEVE LEGDNKYHAE +GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRY
Sbjct: 361  KYVEVERLEGDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRY 420

Query: 412  EFPLELDLDRDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKF 471
            EFPLELDLDR+DGKYLSPDADR+VRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKF
Sbjct: 421  EFPLELDLDREDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKF 480

Query: 472  DDERVTKEDTKRALEEQYGGEEELPQTNPGFNNT-PFKFTKYSNAYMLVYIREADKDKVI 530
            DDERVTKED KRALEEQYGGEEELPQTNPGFNN  PFKFTKYSNAYMLVYIRE+DKDK+I
Sbjct: 481  DDERVTKEDLKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKII 540

Query: 531  CNVDEKDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARNEDLKEQIGKDIYFDLV 590
            CNVDEKDIAEHLR RLKKEQEEKE K++ KA+AHLYTIIKVAR+EDLKEQIGKDIYFDLV
Sbjct: 541  CNVDEKDIAEHLRVRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLV 600

Query: 591  DHDKVRSFRVQKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPAEEAQ 650
            DHDKVRSFR+QKQ  F  FKEEVAKEFG+PVQ QRFW+WAKRQNHTYRPNRPLTP EE Q
Sbjct: 601  DHDKVRSFRIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQ 660

Query: 651  SVGQVREVSNKVHNAELKLFLEVELGPDLRPIAPSDKTKDDILLFFKLYDPEKEELRYVG 710
             VGQ+RE SNK + AELKLFLEVE   DLRPI P +K+K+DILLFFKLYDPEK  LRY G
Sbjct: 661  PVGQIREASNKANTAELKLFLEVEHLQDLRPIPPPEKSKEDILLFFKLYDPEKAVLRYAG 720

Query: 711  RLFVKSTGKPSEILTRLNEMAGYDPDEEIGLYEEIKFEPNVMCEPIDKKLTFRASQLEDG 770
            RL VKS+ KP +I  +LNEM G+ PDEEI L+EEIKFEP VMCE +DKK +FR  Q+EDG
Sbjct: 721  RLMVKSSSKPMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDG 780

Query: 771  DIICFQKAPAMDSEEHVRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLYTYDD 830
            DIICFQK P ++ E    YP VPS+LEYV NRQ+V FR+L+KPKED+F LE+S+ +TYDD
Sbjct: 781  DIICFQK-PLVNKEIECLYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKQHTYDD 839

Query: 831  VVEKVAQQLNLDDPSKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEI 890
            VVEKVA++L LDDPSK+RLT HNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYE+
Sbjct: 840  VVEKVAEKLGLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEV 899

Query: 891  LDIPLPELQGLKTLKVAFYHATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELR 950
            LDIPLPELQGLKTLKVAF+HATK+EVV H IRLPKQSTVGDV+++LKTKVELSHP+AELR
Sbjct: 900  LDIPLPELQGLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELR 959

Query: 951  LLEVFYHKIYKVFPPNEKIETINDQYWTLRAEEVPEEEKNLGPHDRLIHVYHFTKDTSQN 1010
            LLEVFYHKIYK+FP  E+IE INDQYWTLRAEE+PEEEKN+GP+DRLI VYHF K+T QN
Sbjct: 960  LLEVFYHKIYKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQN 1019

Query: 1011 QMQIQNFGEPFFLVIREGETLTEIKVRIQKKLQVPDDEFEKWKFAFFALGRPEYLQDSDI 1070
            Q Q+QNFGEPFFLVI EGETL EIK RIQKKL V D++F KWKFAF ++GRPEYLQD+D+
Sbjct: 1020 Q-QVQNFGEPFFLVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDTDV 1078

Query: 1071 VSNRFQRRDVYGAWEQYLGLEHTDNAPKRSYAVNQNRHTFEKPVKIYN 1118
            V NRFQRRDVYGA+EQYLGLEH D  PKR+YA NQNRH +EKPVKIYN
Sbjct: 1079 VYNRFQRRDVYGAFEQYLGLEHADTTPKRAYAANQNRHAYEKPVKIYN 1126


>gb|AAO22588.1| putative ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana]
            gi|30681938|ref|NP_187797.3| ubiquitin-specific protease,
            putative [Arabidopsis thaliana]
          Length = 1115

 Score = 1912 bits (4953), Expect = 0.0
 Identities = 909/1118 (81%), Positives = 1014/1118 (90%), Gaps = 3/1118 (0%)

Query: 1    MTVMTPAPIDQQEDEEMLVPHTDLPENNHQPMEVVAQPEAAPTVESQPVEEPPQSRFTWR 60
            MT+MTP P+DQQEDEEMLVP+ DL E   QPMEV     AA  VE+ P E+PP  +FTW 
Sbjct: 1    MTMMTPPPLDQQEDEEMLVPNPDLVEGP-QPMEVAQTDPAATAVENPPPEDPPSLKFTWT 59

Query: 61   IDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLPYGWSRYAQF 120
            I  F+R+N +K YS+VFVVGGYKWR+LIFPKGNNVD+LSMYLDVAD+ NLPYGWSRY+QF
Sbjct: 60   IPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLPYGWSRYSQF 119

Query: 121  SLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVL 180
            SLAVVNQ+ N+Y++RK+TQHQFNARESDWGFTSFMPL ELY+P+RGYL+NDT+++EAEV 
Sbjct: 120  SLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVA 179

Query: 181  VRRIVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPAG 240
            VR+++DYW+YDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P  
Sbjct: 180  VRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTA 239

Query: 241  SIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 300
            SIPLALQSLFYKLQY+DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
Sbjct: 240  SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 299

Query: 301  VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFDKYVEVEPLE 360
            VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGC DVYASFDKYVEVE LE
Sbjct: 300  VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLE 359

Query: 361  GDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD 420
            GDNKYHAE + LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPL+LDLD
Sbjct: 360  GDNKYHAEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD 419

Query: 421  RDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 480
            R+DG+YLSPDAD++VRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
Sbjct: 420  REDGRYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 479

Query: 481  TKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIREADKDKVICNVDEKDIAE 540
             KRALEEQYGGEEELPQ NPGFNN PFKFTKYSNAYMLVYIRE+DKDK+ICNVDEKDIAE
Sbjct: 480  VKRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAE 539

Query: 541  HLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARNEDLKEQIGKDIYFDLVDHDKVRSFRV 600
            HLR RLKKEQEEKE K+K KA+AHL+T IKVAR++D+ EQIGK+IYFDLVDH+KVRSFR+
Sbjct: 540  HLRVRLKKEQEEKEDKRKYKAQAHLFTTIKVARDDDITEQIGKNIYFDLVDHEKVRSFRI 599

Query: 601  QKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPAEEAQSVGQVREVSN 660
            QKQ  F  FKEEVAKEFG+PVQ QRFW+WAKRQNHTYRPNRPL+P EE Q+VGQ+RE SN
Sbjct: 600  QKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLSPNEELQTVGQIREASN 659

Query: 661  KVHNAELKLFLEVELGPDLRPIAPSDKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGKP 720
            K +NAELKLFLE+E GPD  PI P +KT +DILLFFKLYDPE   LRYVGRL VKS+ KP
Sbjct: 660  KANNAELKLFLEIERGPDDLPIPPPEKTSEDILLFFKLYDPENAVLRYVGRLMVKSSSKP 719

Query: 721  SEILTRLNEMAGYDPDEEIGLYEEIKFEPNVMCEPIDKKLTFRASQLEDGDIICFQKAPA 780
             +I+ +LN+MAG+ PDEEI L+EEIKFEP VMCE IDKK +FR  Q+EDGDIIC+QK P 
Sbjct: 720  MDIVGQLNKMAGFAPDEEIELFEEIKFEPCVMCEQIDKKTSFRLCQIEDGDIICYQK-PL 778

Query: 781  MDSEEHVRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLYTYDDVVEKVAQQLN 840
               E   RYPDVPS+LEYV NR++V FR+L+KPKED+F +E+S+L+TYDDVVE+VA++L 
Sbjct: 779  SIEESEFRYPDVPSFLEYVQNRELVRFRTLEKPKEDEFTMELSKLHTYDDVVERVAEKLG 838

Query: 841  LDDPSKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEILDIPLPELQG 900
            LDDPSK+RLT HNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYE+LDIPLPELQG
Sbjct: 839  LDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQG 898

Query: 901  LKTLKVAFYHATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYHKIY 960
            LKTLKVAF+ ATKDEV+ H IRLPKQSTVGDV+++LKTKVELSH +AELRLLEVF+HKIY
Sbjct: 899  LKTLKVAFHSATKDEVIIHNIRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFFHKIY 958

Query: 961  KVFPPNEKIETINDQYWTLRAEEVPEEEKNLGPHDRLIHVYHFTKDTSQNQMQIQNFGEP 1020
            K+FP  E+IE INDQYWTLRAEE+PEEEKN+GP+DRLIHVYHFTK+  QNQ Q+QNFGEP
Sbjct: 959  KIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLIHVYHFTKEAGQNQ-QVQNFGEP 1017

Query: 1021 FFLVIREGETLTEIKVRIQKKLQVPDDEFEKWKFAFFALGRPEYLQDSDIVSNRFQRRDV 1080
            FFLVI EGETL EIK RIQKKL VPD++F KWKFA F++GRP+YL D+D+V NRFQRRDV
Sbjct: 1018 FFLVIHEGETLEEIKTRIQKKLHVPDEDFAKWKFASFSMGRPDYLLDTDVVYNRFQRRDV 1077

Query: 1081 YGAWEQYLGLEHTDNAPKRSYAVNQNRHTFEKPVKIYN 1118
            YGAWEQYLGLEH DNAPKR+YA NQNRH +EKPVKIYN
Sbjct: 1078 YGAWEQYLGLEHIDNAPKRAYAANQNRHAYEKPVKIYN 1115


>gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana]
            gi|13430572|gb|AAK25908.1| putative ubiquitin-specific
            protease UBP12 [Arabidopsis thaliana]
            gi|30681531|ref|NP_850783.1| ubiquitin-specific protease
            12 (UBP12) [Arabidopsis thaliana]
          Length = 1115

 Score = 1911 bits (4950), Expect = 0.0
 Identities = 923/1119 (82%), Positives = 1012/1119 (89%), Gaps = 5/1119 (0%)

Query: 1    MTVMTPAPIDQQEDEEMLVPHTDLPENNHQPMEVVAQPEAAPTVESQPVEEPPQSRFTWR 60
            MT+MTP P+D  EDEEMLVP++DL +   QPMEV     AA TVE+QP E+PP  +FTW 
Sbjct: 1    MTMMTPPPVDP-EDEEMLVPNSDLVDGPAQPMEVTQPETAASTVENQPAEDPPTLKFTWT 59

Query: 61   IDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLPYGWSRYAQF 120
            I NFSR N +K YS+VFVVGGYKWR+LIFPKGNNVD+LSMYLDV+D+ +LPYGWSRYAQF
Sbjct: 60   IPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWSRYAQF 119

Query: 121  SLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVL 180
            SLAVVNQI  +YTVRK+TQHQFNARESDWGFTSFMPL ELYDPSRGYL+NDT++VEAEV 
Sbjct: 120  SLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVA 179

Query: 181  VRRIVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPAG 240
            VR+++DYW+YDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P  
Sbjct: 180  VRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTA 239

Query: 241  SIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 300
            SIPLALQSLFYKLQY+DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
Sbjct: 240  SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 299

Query: 301  VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFDKYVEVEPLE 360
            VVEGTIQ+LFEGHHMNYIECINVD+KSTRKESFYDLQLDVKGC DVYASFDKYVEVE LE
Sbjct: 300  VVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLE 359

Query: 361  GDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD 420
            GDNKYHAE +GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD
Sbjct: 360  GDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD 419

Query: 421  RDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 480
            R+DGKYLSPDADR+VRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
Sbjct: 420  REDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 479

Query: 481  TKRALEEQYGGEEELPQTNPGFNNT-PFKFTKYSNAYMLVYIREADKDKVICNVDEKDIA 539
             KRALEEQYGGEEELPQTNPGFNN  PFKFTKYSNAYMLVYIRE+DKDK+ICNVDEKDIA
Sbjct: 480  LKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA 539

Query: 540  EHLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARNEDLKEQIGKDIYFDLVDHDKVRSFR 599
            EHLR RLKKEQEEKE K++ KA+AHLYTIIKVAR+EDLKEQIGKDIYFDLVDHDKVRSFR
Sbjct: 540  EHLRVRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRSFR 599

Query: 600  VQKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPAEEAQSVGQVREVS 659
            +QKQ  F  FKEEVAKEFG+PVQ QRFW+WAKRQNHTYRPNRPLTP EE Q VGQ+RE S
Sbjct: 600  IQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREAS 659

Query: 660  NKVHNAELKLFLEVELGPDLRPIAPSDKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGK 719
            NK + AELKLFLEVE   DLRPI P +K+K+DILLFFKLYDPEK  L Y GRL VKS+ K
Sbjct: 660  NKANTAELKLFLEVE-HLDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSSSK 718

Query: 720  PSEILTRLNEMAGYDPDEEIGLYEEIKFEPNVMCEPIDKKLTFRASQLEDGDIICFQKAP 779
            P +I  +LNEM G+ PDEEI L+EEIKFEP VMCE +DKK +FR  Q+EDGDIICFQK P
Sbjct: 719  PMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQK-P 777

Query: 780  AMDSEEHVRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLYTYDDVVEKVAQQL 839
             ++ E    YP VPS+LEYV NRQ+V FR+L+KPKED+F LE+S+ +TYDDVVEKVA++L
Sbjct: 778  LVNKEIECLYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKQHTYDDVVEKVAEKL 837

Query: 840  NLDDPSKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEILDIPLPELQ 899
             LDDPSK+RLT HNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYE+LDIPLPELQ
Sbjct: 838  GLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQ 897

Query: 900  GLKTLKVAFYHATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYHKI 959
            GLKTLKVAF+HATK+EVV H IRLPKQSTVGDV+++LKTKVELSHP+AELRLLEVFYHKI
Sbjct: 898  GLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYHKI 957

Query: 960  YKVFPPNEKIETINDQYWTLRAEEVPEEEKNLGPHDRLIHVYHFTKDTSQNQMQIQNFGE 1019
            YK+FP  E+IE INDQYWTLRAEE+PEEEKN+GP+DRLI VYHF K+T QNQ Q+QNFGE
Sbjct: 958  YKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQ-QVQNFGE 1016

Query: 1020 PFFLVIREGETLTEIKVRIQKKLQVPDDEFEKWKFAFFALGRPEYLQDSDIVSNRFQRRD 1079
            PFFLVI EGETL EIK RIQKKL V D++F KWKFAF ++GRPEYLQD+D+V NRFQRRD
Sbjct: 1017 PFFLVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDTDVVYNRFQRRD 1076

Query: 1080 VYGAWEQYLGLEHTDNAPKRSYAVNQNRHTFEKPVKIYN 1118
            VYGA+EQYLGLEH D  PKR+YA NQNRH +EKPVKIYN
Sbjct: 1077 VYGAFEQYLGLEHADTTPKRAYAANQNRHAYEKPVKIYN 1115


>gb|AAF23207.1| putative ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana]
          Length = 1124

 Score = 1904 bits (4933), Expect = 0.0
 Identities = 909/1127 (80%), Positives = 1014/1127 (89%), Gaps = 12/1127 (1%)

Query: 1    MTVMTPAPID---------QQEDEEMLVPHTDLPENNHQPMEVVAQPEAAPTVESQPVEE 51
            MT+MTP P+D         QQEDEEMLVP+ DL E   QPMEV     AA  VE+ P E+
Sbjct: 1    MTMMTPPPLDVISDYPIIVQQEDEEMLVPNPDLVEGP-QPMEVAQTDPAATAVENPPPED 59

Query: 52   PPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLP 111
            PP  +FTW I  F+R+N +K YS+VFVVGGYKWR+LIFPKGNNVD+LSMYLDVAD+ NLP
Sbjct: 60   PPSLKFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLP 119

Query: 112  YGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLND 171
            YGWSRY+QFSLAVVNQ+ N+Y++RK+TQHQFNARESDWGFTSFMPL ELY+P+RGYL+ND
Sbjct: 120  YGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVND 179

Query: 172  TLVVEAEVLVRRIVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMP 231
            T+++EAEV VR+++DYW+YDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMP
Sbjct: 180  TVLIEAEVAVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMP 239

Query: 232  TTENDMPAGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCE 291
            TTEND P  SIPLALQSLFYKLQY+DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCE
Sbjct: 240  TTENDAPTASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCE 299

Query: 292  KLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFD 351
            KLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGC DVYASFD
Sbjct: 300  KLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFD 359

Query: 352  KYVEVEPLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRY 411
            KYVEVE LEGDNKYHAE + LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRY
Sbjct: 360  KYVEVERLEGDNKYHAEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRY 419

Query: 412  EFPLELDLDRDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKF 471
            EFPL+LDLDR+DG+YLSPDAD++VRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKF
Sbjct: 420  EFPLQLDLDREDGRYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKF 479

Query: 472  DDERVTKEDTKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIREADKDKVIC 531
            DDERVTKED KRALEEQYGGEEELPQ NPGFNN PFKFTKYSNAYMLVYIRE+DKDK+IC
Sbjct: 480  DDERVTKEDVKRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIIC 539

Query: 532  NVDEKDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARNEDLKEQIGKDIYFDLVD 591
            NVDEKDIAEHLR RLKKEQEEKE K+K KA+AHL+T IKVAR++D+ EQIGK+IYFDLVD
Sbjct: 540  NVDEKDIAEHLRVRLKKEQEEKEDKRKYKAQAHLFTTIKVARDDDITEQIGKNIYFDLVD 599

Query: 592  HDKVRSFRVQKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPAEEAQS 651
            H+KVRSFR+QKQ  F  FKEEVAKEFG+PVQ QRFW+WAKRQNHTYRPNRPL+P EE Q+
Sbjct: 600  HEKVRSFRIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLSPNEELQT 659

Query: 652  VGQVREVSNKVHNAELKLFLEVELGPDLRPIAPSDKTKDDILLFFKLYDPEKEELRYVGR 711
            VGQ+RE SNK +NAELKLFLE+E GPD  PI P +KT +DILLFFKLYDPE   LRYVGR
Sbjct: 660  VGQIREASNKANNAELKLFLEIERGPDDLPIPPPEKTSEDILLFFKLYDPENAVLRYVGR 719

Query: 712  LFVKSTGKPSEILTRLNEMAGYDPDEEIGLYEEIKFEPNVMCEPIDKKLTFRASQLEDGD 771
            L VKS+ KP +I+ +LN+MAG+ PDEEI L+EEIKFEP VMCE IDKK +FR  Q+EDGD
Sbjct: 720  LMVKSSSKPMDIVGQLNKMAGFAPDEEIELFEEIKFEPCVMCEQIDKKTSFRLCQIEDGD 779

Query: 772  IICFQKAPAMDSEEHVRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLYTYDDV 831
            IIC+QK P    E   RYPDVPS+LEYV NR++V FR+L+KPKED+F +E+S+L+TYDDV
Sbjct: 780  IICYQK-PLSIEESEFRYPDVPSFLEYVQNRELVRFRTLEKPKEDEFTMELSKLHTYDDV 838

Query: 832  VEKVAQQLNLDDPSKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEIL 891
            VE+VA++L LDDPSK+RLT HNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYE+L
Sbjct: 839  VERVAEKLGLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVL 898

Query: 892  DIPLPELQGLKTLKVAFYHATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRL 951
            DIPLPELQGLKTLKVAF+ ATKDEV+ H IRLPKQSTVGDV+++LKTKVELSH +AELRL
Sbjct: 899  DIPLPELQGLKTLKVAFHSATKDEVIIHNIRLPKQSTVGDVINELKTKVELSHQDAELRL 958

Query: 952  LEVFYHKIYKVFPPNEKIETINDQYWTLRAEEVPEEEKNLGPHDRLIHVYHFTKDTSQNQ 1011
            LEVF+HKIYK+FP  E+IE INDQYWTLRAEE+PEEEKN+GP+DRLIHVYHFTK+  QNQ
Sbjct: 959  LEVFFHKIYKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLIHVYHFTKEAGQNQ 1018

Query: 1012 MQIQNFGEPFFLVIREGETLTEIKVRIQKKLQVPDDEFEKWKFAFFALGRPEYLQDSDIV 1071
             Q+QNFGEPFFLVI EGETL EIK RIQKKL VPD++F KWKFA F++GRP+YL D+D+V
Sbjct: 1019 -QVQNFGEPFFLVIHEGETLEEIKTRIQKKLHVPDEDFAKWKFASFSMGRPDYLLDTDVV 1077

Query: 1072 SNRFQRRDVYGAWEQYLGLEHTDNAPKRSYAVNQNRHTFEKPVKIYN 1118
             NRFQRRDVYGAWEQYLGLEH DNAPKR+YA NQNRH +EKPVKIYN
Sbjct: 1078 YNRFQRRDVYGAWEQYLGLEHIDNAPKRAYAANQNRHAYEKPVKIYN 1124


>ref|XP_476711.1| putative ubiquitin-specific protease [Oryza sativa (japonica
            cultivar-group)] gi|34395211|dbj|BAC83609.1| putative
            ubiquitin-specific protease [Oryza sativa (japonica
            cultivar-group)]
          Length = 1116

 Score = 1774 bits (4596), Expect = 0.0
 Identities = 861/1109 (77%), Positives = 973/1109 (87%), Gaps = 27/1109 (2%)

Query: 11   QQEDEEMLVPHTDLPENNHQPMEVVAQP-EAAPTVESQPVEEPPQSRFTWRIDNFSRMNV 69
            QQE+EE+LVP  +LP N  QPME V  P E A TVE+Q +E+PP SRFTW I+N SR++ 
Sbjct: 34   QQEEEEVLVPRQELP-NGTQPMEAVVVPSEPAATVENQQIEDPPISRFTWTIENLSRVST 92

Query: 70   KKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQ 129
            KKLYSE+FVVGGYKWR+LIFP+GNNV+YLSMYLDVADS  LPYGW+RYAQFSL+VVNQ+ 
Sbjct: 93   KKLYSEIFVVGGYKWRILIFPRGNNVEYLSMYLDVADSAVLPYGWTRYAQFSLSVVNQMH 152

Query: 130  NKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVLVRRIVDYWT 189
            NK+T+RK+TQHQF+ARESDWGFTSFMPLG+LY+PSRGYL+NDT +VEAEV V ++VDYW+
Sbjct: 153  NKFTIRKETQHQFSARESDWGFTSFMPLGDLYNPSRGYLVNDTCIVEAEVAVCKVVDYWS 212

Query: 190  YDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPAGSIPLALQSL 249
            YDSKKETGYVGLKNQ     ++S  Q          AVYHMPTTENDMP+GSIPLALQSL
Sbjct: 213  YDSKKETGYVGLKNQ-----VDSACQ----------AVYHMPTTENDMPSGSIPLALQSL 257

Query: 250  FYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQKL 309
            FYKLQY+D+SV+TKELTKSFGWD +DSFMQHDVQELNRVL EKLEDKMK  ++    Q +
Sbjct: 258  FYKLQYNDSSVSTKELTKSFGWDMHDSFMQHDVQELNRVLSEKLEDKMKKGIL--LWQVI 315

Query: 310  FEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFDKYVEVEPLEGDNKYHAEQ 369
               HH +Y++    D       +  DLQLDVKGC DVYASFDKYVEVE LEGDNKYHAEQ
Sbjct: 316  VLSHHGHYVQTCPFDLIGVHSNA--DLQLDVKGCQDVYASFDKYVEVERLEGDNKYHAEQ 373

Query: 370  YGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRDDGKYLSP 429
            YGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFP++LDLDRDDGKYLSP
Sbjct: 374  YGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPIQLDLDRDDGKYLSP 433

Query: 430  DADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDTKRALEEQY 489
            DADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQW+KFDDERVTKED KRALEEQY
Sbjct: 434  DADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVTKEDAKRALEEQY 493

Query: 490  GGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIREADKDKVICNVDEKDIAEHLRERLKKE 549
            GGEEELPQTNPG NNTPFKFTKYSNAYMLVYIRE+DKDK+ICNVDEKDIAEHLR RL+K+
Sbjct: 494  GGEEELPQTNPGLNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLEKD 553

Query: 550  QEEKEHKKKEKAEAHLYTIIKVARNEDLKEQIGKDIYFDLVDHDKVRSFRVQKQMSFNLF 609
            +EEKE +KKEKAEAHLYTIIKVAR++DL  QIGKDIYFDLVDHDKV SFR+QKQM F  F
Sbjct: 554  REEKERRKKEKAEAHLYTIIKVARDDDLTTQIGKDIYFDLVDHDKVPSFRIQKQMPFTQF 613

Query: 610  KEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPAEEAQSVGQVREVSNKVHNAELKL 669
            KEEVAKEFGIP QFQRFWLWAKRQNHTYRPNRPLTP EE  +VGQ++E +NK HNAELKL
Sbjct: 614  KEEVAKEFGIPTQFQRFWLWAKRQNHTYRPNRPLTPQEETHTVGQLKEAANKAHNAELKL 673

Query: 670  FLEVELGPDLRPIAPSDKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGKPSEILTRLNE 729
            FLEVELG DL+P+   DKT++DILLFFKLYDPEKE+L    RLFVK++GKP +IL +L +
Sbjct: 674  FLEVELGLDLKPLPLPDKTREDILLFFKLYDPEKEQL----RLFVKASGKPQDILPKLRK 729

Query: 730  MAGYDPDEEIGLYEEIKFEPNVMCEPIDKKLTFRASQLEDGDIICFQKAPAMDSEEHVRY 789
            MAG+  DEEI LYEEIKFEPNVMCE ID +L FRA QLEDGDI+CFQK+P  D+ +  RY
Sbjct: 730  MAGFSQDEEIELYEEIKFEPNVMCEYIDNRLLFRACQLEDGDIVCFQKSPKPDTADQYRY 789

Query: 790  PDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLYTYDDVVEKVAQQLNLDDPSKIRL 849
            PDVPS+L Y+ NRQVVHFRSL+KPKEDDFCLEMS+ +TYD+VVEKVAQ+L +DDP+KIRL
Sbjct: 790  PDVPSFLVYIRNRQVVHFRSLEKPKEDDFCLEMSKAFTYDEVVEKVAQKLGVDDPTKIRL 849

Query: 850  TPHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEILDIPLPELQGLKTLKVAFY 909
            T HNCYSQQPKPQPIKYRGV+ L DML+HYNQTSDILYYE+LDIPLPELQ LKTLKV ++
Sbjct: 850  TSHNCYSQQPKPQPIKYRGVERLLDMLIHYNQTSDILYYEVLDIPLPELQALKTLKVTYH 909

Query: 910  HATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYHKIYKVFPPNEKI 969
            H TKDEV  H+IRLPK STVGDVL+D+K+KVELSHPNAELRLLEVFYHKIYK+F PNEKI
Sbjct: 910  HGTKDEVSVHSIRLPKNSTVGDVLNDIKSKVELSHPNAELRLLEVFYHKIYKIFAPNEKI 969

Query: 970  ETINDQYWTLRAEEVPEEEKNLGPHDRLIHVYHFTKDTSQNQMQIQNFGEPFFLVIREGE 1029
            E INDQYWTLRAEEVPEEEKNLGP DRLIHVYHFTKDT QNQ Q+QNFGEPFF+VIRE E
Sbjct: 970  ENINDQYWTLRAEEVPEEEKNLGPFDRLIHVYHFTKDT-QNQTQVQNFGEPFFMVIREDE 1028

Query: 1030 TLTEIKVRIQKKLQVPDDEFEKWKFAFFALGRPEYLQDSDIVSNRFQRRDVYGAWEQYLG 1089
            TL+ IK RIQKKL+VPD++F KWKFA+ +LGRP+Y +DSD V++RFQ R++YGAWEQYLG
Sbjct: 1029 TLSSIKERIQKKLKVPDEDFSKWKFAYISLGRPDYFEDSDTVASRFQ-RNMYGAWEQYLG 1087

Query: 1090 LEHTDNAPKRSYAVNQNRHTFEKPVKIYN 1118
            LEH D AP++++  NQNRH+FE+PVKIYN
Sbjct: 1088 LEHPDTAPRKTHNANQNRHSFERPVKIYN 1116


>ref|NP_916313.1| putative ubiquitin carboxyl-terminal hydrolase [Oryza sativa
            (japonica cultivar-group)] gi|56785209|dbj|BAD82061.1|
            putative ubiquitin carboxyl-terminal hydrolase 7 [Oryza
            sativa (japonica cultivar-group)]
            gi|14209584|dbj|BAB56080.1| putative ubiquitin
            carboxyl-terminal hydrolase 7 [Oryza sativa (japonica
            cultivar-group)]
          Length = 1108

 Score = 1602 bits (4148), Expect = 0.0
 Identities = 784/1120 (70%), Positives = 927/1120 (82%), Gaps = 15/1120 (1%)

Query: 1    MTVMTPAPIDQQEDEEMLVPHTDLPENNHQPMEVVAQPEAAPTVESQPVEEPPQSRFTWR 60
            +T   P  + Q +DEEMLVP  D+     QPME     ++  TVE++ V E   SRFTW 
Sbjct: 2    VTPRAPELLQQDQDEEMLVPDQDVVVEGPQPME-----DSGSTVENEQVPETSTSRFTWT 56

Query: 61   IDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLPYGWSRYAQF 120
            I++FS  N +KLYS+VFVVGG+KWRVL+FP GN+V  LSMYLD+AD+   P+GWS+YAQF
Sbjct: 57   IEDFS--NHRKLYSDVFVVGGHKWRVLVFPTGNSVQSLSMYLDIADANEQPHGWSKYAQF 114

Query: 121  SLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEVL 180
            SLAV+NQ+ +KY++RK+  H F+ RESDWGFTSFM LG+LYDP++GY++ND  ++EAEV 
Sbjct: 115  SLAVINQLDSKYSLRKEAAHHFSTRESDWGFTSFMHLGDLYDPTKGYIVNDKCIIEAEVA 174

Query: 181  VRRIVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPAG 240
            VR+IVD+W YDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P G
Sbjct: 175  VRKIVDFWNYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDTPCG 234

Query: 241  SIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 300
            SIPLALQSLF KLQ+SD SV+TKELTKSFGWDT DSF+QHDVQELNRVLCEKLE+KMKGT
Sbjct: 235  SIPLALQSLFCKLQHSDNSVSTKELTKSFGWDTVDSFLQHDVQELNRVLCEKLENKMKGT 294

Query: 301  VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFDKYVEVEPLE 360
             VEGTIQ+LFEGHHMNYIECINVDYKSTRKESFYDL LDVKGC DVYASFDKYVEVE LE
Sbjct: 295  TVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLALDVKGCSDVYASFDKYVEVERLE 354

Query: 361  GDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD 420
            GDNKY +E++GLQDAKKG+LFIDFPPVLQ+QLKRFEYDF+RDTMVKINDRYEFPL+LDLD
Sbjct: 355  GDNKYQSEKHGLQDAKKGMLFIDFPPVLQVQLKRFEYDFVRDTMVKINDRYEFPLQLDLD 414

Query: 421  RDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 480
            +DDGKYLSP+ADR VRNLYTLHSVLVHSGG HGGHYYAFIRP LSD WYKFDDERVTKED
Sbjct: 415  KDDGKYLSPEADRRVRNLYTLHSVLVHSGGGHGGHYYAFIRPALSDIWYKFDDERVTKED 474

Query: 481  TKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIREADKDKVICNVDEKDIAE 540
             KRALEEQYGGEEELP TNPG N TP +FTK+SNAYMLVYIRE+D++K+ICN+DE DI E
Sbjct: 475  MKRALEEQYGGEEELPHTNPGLNTTPLRFTKHSNAYMLVYIRESDREKIICNLDENDIPE 534

Query: 541  HLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARNEDLKEQIGKDIYFDLVDHDKVRSFRV 600
            HL+ RL+KE EE+E+KKKEKAEAH++T +KVAR+ D  EQIGK IYFDLVD+D ++S R 
Sbjct: 535  HLKIRLRKENEEREYKKKEKAEAHMFTALKVARDSDFAEQIGKHIYFDLVDYDNIQSLRA 594

Query: 601  QKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPAEEAQSVGQVREVSN 660
             K ++ N  K +++KEFGIPVQ QRFWLWAKRQNHT+RP RPLT  EEA S+G + + SN
Sbjct: 595  PKHLTINQAKVDLSKEFGIPVQSQRFWLWAKRQNHTFRPVRPLTLQEEASSIGHLTDPSN 654

Query: 661  KVHNAELKLFLEVELGPDLRPIAPSDKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGKP 720
            K  N+ELKLFLEV LG +  PI+   KTKDDIL+FFKLYDPEKEELRYVG+L VK++GKP
Sbjct: 655  KSLNSELKLFLEVALGQENHPISVPPKTKDDILIFFKLYDPEKEELRYVGKLLVKASGKP 714

Query: 721  SEILTRLNEMAGYDPDEEIGLYEEIKFEPNVMCEPIDKKLTFRASQLEDGDIICFQKAPA 780
            ++I+ +L EMAG+  DE+I LYEE+ FEP+VMCEPI+   +F +SQLEDGDIIC+QK  +
Sbjct: 715  ADIVQKLQEMAGFQSDEDIELYEEVMFEPSVMCEPININDSFLSSQLEDGDIICYQKRCS 774

Query: 781  MDSEEHVRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLYTYDDVVEKVAQQLN 840
             +  +H R  DVPS+ EY+ NRQVVHFR L+ PK+DDF LE+S+ +TYDDVVEKVA QL 
Sbjct: 775  PEKLDHYRCADVPSFFEYIQNRQVVHFRLLENPKDDDFTLELSKRFTYDDVVEKVANQLG 834

Query: 841  LDDPSKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEILDIPLPELQG 900
            LDDPSK+RLT H  YSQ PK   IKYRG+DHLSDML + NQ SDILYYEILDIPLP LQ 
Sbjct: 835  LDDPSKLRLTQHLPYSQMPKSHYIKYRGLDHLSDMLRNGNQMSDILYYEILDIPLPVLQD 894

Query: 901  LKTLKVAFYHATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYHKIY 960
            L TL+VAFYHAT +EV SH IRLPK ST+ D+++D+K+KVELS+ +AE RL EV+ +KI 
Sbjct: 895  LITLRVAFYHATNNEVSSHFIRLPKGSTMSDLIEDMKSKVELSYSDAEFRLFEVYKNKIR 954

Query: 961  KVFPPNEKIETINDQYWTLRAEEVPEEEKNLGPHDRLIHVYHFTKDTSQNQMQIQNFGEP 1020
            KV+ P+EKI ++N+    L  EEVPEEEKN G  DRL+HV HF  +    +  I  +GEP
Sbjct: 955  KVYQPSEKI-SVNEFNGLLCVEEVPEEEKNAGVRDRLVHVCHFIIE----KQHIDYYGEP 1009

Query: 1021 FFLVIREGETLTEIKVRIQKKLQVPDDEFEKWKFAFFALGR--PEYLQDSDIVSNRFQRR 1078
            FF +IR+GETL++IKVRIQKKL V D++F KWKFA+ A  R   EY QDSDIV +RFQ +
Sbjct: 1010 FFFLIRDGETLSDIKVRIQKKLLVSDEQFAKWKFAYIAHNRLAGEYFQDSDIVLSRFQ-K 1068

Query: 1079 DVYGAWEQYLGLEHTDNAPKRSYAVNQNRHTFEKPVKIYN 1118
            DVYG WEQ LGLEH+D  PKRS   NQNR++F+K VKI+N
Sbjct: 1069 DVYGPWEQCLGLEHSDVTPKRSCLSNQNRNSFDKAVKIFN 1108


>dbj|BAB17021.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis
           thaliana]
          Length = 599

 Score = 1053 bits (2724), Expect = 0.0
 Identities = 504/600 (84%), Positives = 550/600 (91%), Gaps = 10/600 (1%)

Query: 1   MTVMTPAPID---------QQEDEEMLVPHTDLPENNHQPMEVVAQPEAAPTVESQPVEE 51
           MT+MTP P+D         QQEDEEMLVP+ DL E   QPMEV     AA  VE+ P E+
Sbjct: 1   MTMMTPPPLDVISDYPIIVQQEDEEMLVPNPDLVEGP-QPMEVAQTDPAATAVENPPPED 59

Query: 52  PPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLP 111
           PP  +FTW I  F+R+N +K YS+VFVVGGYKWR+LIFPKGNNVD+LSMYLDVAD+ NLP
Sbjct: 60  PPSLKFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLP 119

Query: 112 YGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLND 171
           YGWSRY+QFSLAVVNQ+ N+Y++RK+TQHQFNARESDWGFTSFMPL ELY+P+RGYL+ND
Sbjct: 120 YGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVND 179

Query: 172 TLVVEAEVLVRRIVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMP 231
           T+++EAEV VR+++DYW+YDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMP
Sbjct: 180 TVLIEAEVAVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMP 239

Query: 232 TTENDMPAGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCE 291
           TTEND P  SIPLALQSLFYKLQY+DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCE
Sbjct: 240 TTENDAPTASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCE 299

Query: 292 KLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFD 351
           KLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGC DVYASFD
Sbjct: 300 KLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFD 359

Query: 352 KYVEVEPLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRY 411
           KYVEVE LEGDNKYHAE + LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRY
Sbjct: 360 KYVEVERLEGDNKYHAEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRY 419

Query: 412 EFPLELDLDRDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKF 471
           EFPL+LDLDR+DG+YLSPDAD++VRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKF
Sbjct: 420 EFPLQLDLDREDGRYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKF 479

Query: 472 DDERVTKEDTKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIREADKDKVIC 531
           DDERVTKED KRALEEQYGGEEELPQ NPGFNN PFKFTKYSNAYMLVYIRE+DKDK+IC
Sbjct: 480 DDERVTKEDVKRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIIC 539

Query: 532 NVDEKDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARNEDLKEQIGKDIYFDLVD 591
           NVDEKDIAEHLR RLKKEQEEKE K+K KA+AHL+T IKVAR++D+ EQIGK+IYFDLVD
Sbjct: 540 NVDEKDIAEHLRVRLKKEQEEKEDKRKYKAQAHLFTTIKVARDDDITEQIGKNIYFDLVD 599


>gb|EAL17783.1| hypothetical protein CNBL2960 [Cryptococcus neoformans var.
            neoformans B-3501A] gi|57228718|gb|AAW45153.1| ubiquitin
            carboxyl-terminal hydrolase 5, putative [Cryptococcus
            neoformans var. neoformans JEC21]
            gi|58270608|ref|XP_572460.1| ubiquitin carboxyl-terminal
            hydrolase 5, putative [Cryptococcus neoformans var.
            neoformans JEC21]
          Length = 1113

 Score =  723 bits (1866), Expect = 0.0
 Identities = 443/1092 (40%), Positives = 631/1092 (57%), Gaps = 89/1092 (8%)

Query: 58   TWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNV----DYLSMYLDVADSTNLPYG 113
            TWRI+++S+   K++    F  GG+KWR+L+FP+GN      D +S+YLD A+    P G
Sbjct: 53   TWRIEHWSQQP-KRIVGPEFSCGGHKWRILLFPQGNANGQPNDMVSVYLDYANPKTAPEG 111

Query: 114  WSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELY--DPSRGY---- 167
            W   AQF LA+ N             H+F A E DWGFT F+ L +LY  DP+ G     
Sbjct: 112  WHACAQFCLAISNPWDPTIQTSSHAHHRFVAEECDWGFTRFVDLRKLYTADPANGKNRPT 171

Query: 168  LLNDTLVVEAEVLVRRIV------DYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIP 221
            + ND + + A V V +        ++  YDSKKETG+VGLKNQGATCYMNSLLQ+L+   
Sbjct: 172  IENDEVEITAFVRVLKDPTGVLWHNFVNYDSKKETGHVGLKNQGATCYMNSLLQSLFCTN 231

Query: 222  YFRKAVYHMPTTENDMPAGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHD 281
            YFRKAVY +PT E+D+P+ S+ LALQ +FY LQ S+  V T ELTKSFGW + DSFMQHD
Sbjct: 232  YFRKAVYQIPT-EDDIPSESLALALQRVFYHLQTSNQPVGTTELTKSFGWKSLDSFMQHD 290

Query: 282  VQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVK 341
            VQE +R+L +KLE KMKGT  EG I KLF+G   NYI+CI+VD++S+  E FYD+QL +K
Sbjct: 291  VQEFSRILQDKLEIKMKGTPAEGAIPKLFKGQMKNYIKCIDVDFESSVIEDFYDIQLTIK 350

Query: 342  GCHDVYASFDKYVEVEPLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMR 401
            G  D+ ASF +YV VE L+G+NKY AE +GLQ A+KGV+F  FPPVL LQL+RFEYD  +
Sbjct: 351  GLKDLRASFKEYVSVETLDGENKYQAEGHGLQAARKGVIFKSFPPVLHLQLRRFEYDVEK 410

Query: 402  DTMVKINDRYEFPLELDLDRDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIR 461
            D +VKINDR+EFP E+DL    G++L   ADR   ++Y LH VLVHSG +HGGHY+A I+
Sbjct: 411  DALVKINDRHEFPFEIDL----GEFLDESADRAQSHVYKLHGVLVHSGDLHGGHYFALIK 466

Query: 462  PTLSDQWYKFDDERVTKEDTKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYI 521
            P    +WYKFDD+RVT    K  LE+ YGG+       P          K++NAYMLVYI
Sbjct: 467  PEKDGRWYKFDDDRVTPVTDKEVLEDNYGGDMLNGLVPPHQRTQARTLKKFTNAYMLVYI 526

Query: 522  READKDKVICNVDEKDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARNEDLKEQI 581
            RE + D V+    E D   HL+ RL  E+E+ E KK+EK E HLY   KV  +E   +  
Sbjct: 527  RETELDTVLAPFTESDTPPHLKARLDHEREQLEAKKREKDEQHLYLTAKVITDEIFSQHQ 586

Query: 582  GKDIYFDLVDHD-------KVRSFRVQKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQN 634
            G    FDL   +        + +FRV K  S+  FK  +A  F IP +  R W+   RQN
Sbjct: 587  G----FDLASFEDKNIPATDLPTFRVLKNESYPTFKSRIASHFKIPERDFRLWVLVNRQN 642

Query: 635  HTYRPNRPLTPAEEAQSVGQVREVSNKVHNAELKLFLEVELGPDLRPIAPSDKTKDDILL 694
             T RP+ P+   +  Q++  +R  S     ++LKL+L+            ++  +  I++
Sbjct: 643  KTTRPDVPIHENDNTQTMENIRN-SMAARASDLKLYLDYNPDHARFNELHAEGKEPPIMI 701

Query: 695  FFKLYDPEKEELRYVGRLFVKSTGKPSEILTRLNEMAGYDPDEEIGLYEEIKFEPNVMCE 754
            F K +D  ++ L   G++FV    K S++L  + E  G+     I LYEEIK     M E
Sbjct: 702  FLKWFDCSRQTLLGQGKVFVDKYQKVSDLLGIIQERMGWPSSTPIKLYEEIKAG---MIE 758

Query: 755  PIDKKLTFRASQLEDGDIICFQ----KAPAMDSEEHVRYPDVPSYLEYVHNRQVVHFRSL 810
             +  K +F  ++++DGDIIC+Q    +    D E    Y  VP + +++ NR +VHF   
Sbjct: 759  GMKLKQSFIQNEIQDGDIICYQVELPEKEIADLEAQSLYSSVPQFYDFLQNRILVHF--- 815

Query: 811  DKPKEDD-------FCLEMSRLYTYDDVVEKVAQQLNLDDPSKIRLTPHNCYSQQPKPQP 863
             KP+ +D       F L +S+  TYD +  +V + L   DP K+R T  + ++Q   P+ 
Sbjct: 816  -KPRYEDRAASVPEFDLMLSKKMTYDVMAHRVGEFLK-HDPLKLRFT--SAHNQNGAPKA 871

Query: 864  IKYRGVDH-LSDM--LVHYNQTSDI-LYYEILDIPLPELQGLKTLKVAFYHATKDEVVSH 919
            I  R ++  ++D+    +YNQ + I +YYE+LDI + EL+  K+LKV +      E  +H
Sbjct: 872  IVKRSLNQSVADITQTSYYNQHAHICIYYELLDISIIELETKKSLKVVWTGRHNKEEATH 931

Query: 920  TIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYHKIYKVFP----PNEKI--ETIN 973
            +  LPK  T  DV D++   V+L  PN   ++      +I+ V P    P E    E I 
Sbjct: 932  SFLLPKTCTFNDVADNMLKLVKL-EPNGSGKI------RIFDVSPSGRSPREHTGSEMIG 984

Query: 974  D--QYWTLRAEEVPEEEKNLGPHDRLIHVYHFTKDTSQNQMQIQNFGEPFFLVIREGETL 1031
            +  +   L AEE+P EE   G   ++++V+H+++D S+        G P   V+ EGE  
Sbjct: 985  NLPESAELYAEEIPVEELQAGEGTKIVNVFHYSRDPSRTH------GVPCKFVLHEGEPF 1038

Query: 1032 TEIKVRIQKKLQVPDDEFEKWKFAFF---ALGRPEYLQDSDIVSNRFQRRDVYGAWEQYL 1088
            +E K R+Q+++ VP+ EF K+KF+        +P  ++++DI+       D   A +  L
Sbjct: 1039 SETKARLQERIGVPEKEFAKYKFSLVTSTVFKQPSIVEENDII------YDHKWAPDDAL 1092

Query: 1089 GLEHTDNAPKRS 1100
            GL+H D  P ++
Sbjct: 1093 GLDHIDRRPNKA 1104


>gb|EAK83809.1| hypothetical protein UM02639.1 [Ustilago maydis 521]
            gi|49071930|ref|XP_400254.1| hypothetical protein
            UM02639.1 [Ustilago maydis 521]
          Length = 1115

 Score =  707 bits (1824), Expect = 0.0
 Identities = 431/1089 (39%), Positives = 634/1089 (57%), Gaps = 83/1089 (7%)

Query: 50   EEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNV----DYLSMYLDVA 105
            EE   +  TW+I  +  ++ K++    F  GG++WR+L+FP GN+     D +S+YLD A
Sbjct: 48   EEQDFAVCTWKIKGWRTLD-KRITGPEFECGGHRWRILLFPFGNSNGQPNDMVSVYLDYA 106

Query: 106  DSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSR 165
            D    P GW   AQF+L + N             H+F A E DWGFT F  L +L  P+ 
Sbjct: 107  DPKGSPEGWHVCAQFALVISNPQDPTIFSTSQAHHRFTAEEMDWGFTRFNELRKLAVPTD 166

Query: 166  G----YLLNDTLVVEAEVLVRRIV------DYWTYDSKKETGYVGLKNQGATCYMNSLLQ 215
            G     + ND   V A V V +        ++  YDSKKETGYVGLKNQGATCYMNSLLQ
Sbjct: 167  GRTRPIIENDCADVTAYVRVLKDPTGVLWHNFINYDSKKETGYVGLKNQGATCYMNSLLQ 226

Query: 216  TLYHIPYFRKAVYHMPTTENDMPAGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYD 275
            +L+   YFRKAVY +PT E D+P+ S+ LALQ +FY LQ SD  V T ELTKSFGW + D
Sbjct: 227  SLFCTHYFRKAVYQIPT-EGDVPSESVALALQRVFYLLQTSDQPVGTNELTKSFGWKSLD 285

Query: 276  SFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYD 335
            SF+QHDVQE NRVL EKLE KMKGT  +G I +LF G   +Y++C+NVDY+S+R E FYD
Sbjct: 286  SFLQHDVQEFNRVLQEKLETKMKGTAADGAITRLFVGKMKSYLKCVNVDYESSRTEDFYD 345

Query: 336  LQLDVKGCHDVYASFDKYVEVEPLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRF 395
            +QL+VKG +++  SF  YV  E L+GDNKYHAE YGLQDA+KGV+F  FPPVL LQLKRF
Sbjct: 346  IQLNVKGMNNLVDSFRDYVGTEMLDGDNKYHAEGYGLQDARKGVIFEKFPPVLHLQLKRF 405

Query: 396  EYDFMRDTMVKINDRYEFPLELDLDRDDGKYLS-PDADRNVRNLYTLHSVLVHSGGVHGG 454
            EYD  +D+MVKINDR+EFPLE++L    G Y+  P    + R  Y LH VLVHSG +HGG
Sbjct: 406  EYDIEKDSMVKINDRHEFPLEINL----GDYVDMPQCYEDWR--YRLHGVLVHSGDLHGG 459

Query: 455  HYYAFIRPTLSDQWYKFDDERVTKEDTKRALEEQYGGEEELPQTNPGFN---NTPFKFTK 511
            HY+A ++P    +W+KFDD+RVT    K  LE+ +GG  E+P  +P        P +  K
Sbjct: 460  HYFALLKPERDSKWFKFDDDRVTPVTEKEVLEDNFGG--EIPNGHPAAQIGARAPVRAMK 517

Query: 512  -YSNAYMLVYIREADKDKVICNVDEKDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTIIK 570
             ++NAYMLVYIRE D D+V+  +  +D   HLR+RL+ E+ + E +K+E+ E HLY  +K
Sbjct: 518  RFTNAYMLVYIRERDIDEVLKPMAPEDTPVHLRQRLEDERLQMEARKREREEQHLYLTVK 577

Query: 571  VARNEDLKEQIGKDIYFDLVDHDK-------VRSFRVQKQMSFNLFKEEVAKEFGIPVQF 623
            +   +  +   G    FDL   ++       + +FRV K   +  FK  +A ++ +P   
Sbjct: 578  LITEDTFRGHQG----FDLATFEERNLPATDLPTFRVLKNELYLNFKSRIAAQYNLPEDL 633

Query: 624  QRFWLWAKRQNHTYRPNRPLTPAEEAQSVGQVRE-VSNKVHNAELKLFLEVELGPDLRPI 682
             R W+   RQN T RP+  +   +   ++  VR+ ++++ H  +L+LFLEV  G      
Sbjct: 634  IRMWVLVNRQNKTVRPDTVIPENDPNLTLETVRDRMASRQH--DLRLFLEVVNGE----- 686

Query: 683  APSDKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGKPSEILTRLNEMAGYDPDEEIGLY 742
             P+ +    +++F K +D  ++ L  V R++V+   K  +++  +NE+  + P  ++ L+
Sbjct: 687  VPNTEANPSMMIFLKYFDTSRQTLLGVSRVYVQRHMKVGDLVPTINELMRWPPTTQVKLF 746

Query: 743  EEIKFEPNVMCEPIDKKLTFRASQLEDGDIICFQ----KAPAMDSEEHVRYPDVPSYLEY 798
            EEIK  P  M E +  K TF  S+++DGD+ICFQ    +  A D E    Y +   + ++
Sbjct: 747  EEIK--PG-MIEQMKPKATFSQSEIQDGDVICFQIELSEKDAHDYESQSLYSNPIQFYDF 803

Query: 799  VHNRQVVHF--RSLDKPKEDDFCLEMSRLYTYDDVVEKVAQQLNLDDPSKIRLTPHNCYS 856
            + N+  V F  R  D   + +F L +S+  TYD +  K  ++L   DP K+R T  N   
Sbjct: 804  LQNQIKVLFKPRFEDVDYKSEFELTLSKKMTYDMMAAKAGERLK-HDPFKLRFTTGN--G 860

Query: 857  QQPKPQPIKYRGVDHLSDMLV---HYNQTSDILYYEILDIPLPELQGLKTLKVAFYHATK 913
                P+ +  R  +   + +V   +    + +LYYE+LD+ + EL+  + LK+ +  A  
Sbjct: 861  PNGTPKTVLKRTANQTVNEIVSPSYIQGQASLLYYELLDVSIIELETKRNLKIFWTGANN 920

Query: 914  DEVVSHTIRLPKQSTVGDVLDDLKTKVEL-SHPNAELRLLEVFYH-KIYKVFPPNEKIET 971
             E   H   LPK +T+ +V + L  +V+L +  + ++RL E   + +  + F P + I  
Sbjct: 921  KEDSVHQFLLPKTATISEVTEQLGKQVKLTADGSGKVRLFEAILNGRQQREFAPVDMIGN 980

Query: 972  INDQYWTLRAEEVPEEEKNLGPHDRLIHVYHFTKDTSQNQMQIQNFGEPFFLVIREGETL 1031
            I +    L AEEVP EE  L   D++I+V+HF+K+ ++        G PF  V++  E  
Sbjct: 981  IGEGA-ELFAEEVPLEELQLTEDDKIINVFHFSKELARTH------GVPFRFVVKRNEPF 1033

Query: 1032 TEIKVRIQKKLQVPDDEFEKWKFAFF---ALGRPEYLQDSDIV-SNRFQRRDVYGAWEQY 1087
             E + R+Q++L+V + +F K++FA        +P YL+D D++  ++FQ  D        
Sbjct: 1034 RETRKRLQERLEVAEKDFAKFRFALVQSSTYKQPTYLEDDDLLYEHKFQPDDA------- 1086

Query: 1088 LGLEHTDNA 1096
            LGL+HTD +
Sbjct: 1087 LGLDHTDRS 1095


>gb|EAL85980.1| ubiquitin C-terminal hydrolase (HAUSP), putative [Aspergillus
            fumigatus Af293]
          Length = 1123

 Score =  654 bits (1686), Expect = 0.0
 Identities = 427/1140 (37%), Positives = 595/1140 (51%), Gaps = 82/1140 (7%)

Query: 9    IDQQEDEEMLVPHTDLPENNHQPMEVVA-----QPEAAPTVES------------QPVEE 51
            +D   D EMLV   +   N+     VV+     +PE  P  +               +E 
Sbjct: 1    MDNVADNEMLVDEYEQYHNDRTDDVVVSRSGSEEPEPEPLADDFTAMMARILPKDPDLET 60

Query: 52   PPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLP 111
              ++  TW I ++ ++  KK +  +F  GG+ WRVL FP GN+VDY S YL+ A     P
Sbjct: 61   ADEAYHTWHIQDWRKLK-KKEHGPIFQCGGFPWRVLFFPYGNHVDYASFYLEHAWEKEPP 119

Query: 112  YGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYD---PSRGYL 168
              W    QF+L + N       V     H+FNA E DWGFT F  L  L++     RG  
Sbjct: 120  ENWYACVQFALVLWNVNDPSIYVSHVATHRFNADEGDWGFTRFCELRRLFNMPWEGRGVP 179

Query: 169  LNDTLVVEAEVLVRRIVD--------YWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHI 220
            L      +    VR + D        +  YDSKKETG VGLKNQGATCY+NSLLQ+LY  
Sbjct: 180  LVQNDEAKITAYVRVVKDPTGVLWHSFQNYDSKKETGMVGLKNQGATCYLNSLLQSLYFT 239

Query: 221  PYFRKAVYHMPTTENDMPAGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQH 280
              FRKAVY +PT E +    +    LQ LFY LQ S++SV+T ELT SFGW++   F Q 
Sbjct: 240  NAFRKAVYQIPT-EAEATRDNSAWTLQRLFYNLQTSESSVSTTELTASFGWESRQIFEQQ 298

Query: 281  DVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDV 340
            DVQEL+R L E+LE+KMK T VE  +  LF G    YI CINVDY+S+R E F+D+QL+V
Sbjct: 299  DVQELSRKLMERLEEKMKATPVEKALPGLFVGKTKTYISCINVDYESSRVEDFWDIQLNV 358

Query: 341  KGCHDVYASFDKYVEVEPLEGDNKYHA-EQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDF 399
            +G   +  SF  Y++VE LEG+NKY A   YGLQDAKKGV+F  FPPVL L LKRFEYD 
Sbjct: 359  RGNKTLDDSFKDYIQVETLEGENKYDAGSPYGLQDAKKGVIFESFPPVLHLHLKRFEYDI 418

Query: 400  MRDTMVKINDRYEFPLELDLDRDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAF 459
             RD M+KINDR+ FP+E D       YLS  AD++   +Y LH VLVHSG ++ GHYYAF
Sbjct: 419  NRDAMMKINDRHAFPMEFDAT----PYLSDAADKSEPWIYQLHGVLVHSGDLNAGHYYAF 474

Query: 460  IRPTLSDQWYKFDDERVTKEDTKRALEEQYGGEEELPQTNPGFN--NTPFKFTKYS-NAY 516
            ++PT    W+KFDD+RVT+   K  LEE YGGE EL     G    +T    TK S NAY
Sbjct: 475  LKPTKDGHWFKFDDDRVTRATDKEVLEENYGGEYELSNGAAGVRQPHTRGLSTKRSMNAY 534

Query: 517  MLVYIREADKDKVICNVDEKDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARNED 576
            MLVYIR+   D V+  + + DI  H+ +RL +E+ E   +KKE+ EAHLY  + V  +E 
Sbjct: 535  MLVYIRKTRLDDVLLPITKDDIPSHIEKRLVEERAELLRRKKEREEAHLYINVGVLSDES 594

Query: 577  LKEQIGKDI-YFDLVDHDKV--RSFRVQKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQ 633
                 G D+   DL   D    + +R+ +      F E++A+E G+     R W+   RQ
Sbjct: 595  YTSHHGFDLTSADLPAGDPALPKQYRILRAKKVGEFVEQLAEERGLNANQIRLWVMVNRQ 654

Query: 634  NHTYRPNRPLTPAEEAQSVGQVREVSNKVHNAELKLFLEVELG-PDLRPIAPSDKTKDDI 692
            N T RP++ +   E       V E  ++         + +E+G P          +   +
Sbjct: 655  NKTTRPDQAIKDPEMT-----VEEAYSRFGTKGNPFKVWMEVGQPSADGTISWPDSSTSV 709

Query: 693  LLFFKLYDPEKEELRYVGRLFVKSTGKPSEILTRLNEMAGYDPDEEIGLYEEIKFEPNVM 752
            L+F K +D   + L  VG ++V+   K +E+   + E   +    E  L+EEIK     M
Sbjct: 710  LVFLKNFDVPSQTLSGVGTVYVRKNQKVAELAPTILEKMNWPAGTEFMLFEEIKHN---M 766

Query: 753  CEPIDKKLTFRASQLEDGDIICFQK-APAMDSEEHVRYPDVPSYLEYVHNRQVVHFRSLD 811
             + +  K TF+ S+++DGDII FQ+     D      Y +   Y +Y+ NR  + F  + 
Sbjct: 767  IDVMKPKQTFQQSEIQDGDIITFQRTVKESDLPSTALYTEARQYYDYLLNRINITFAPIK 826

Query: 812  KPKEDDFCLEMSRLYTYDDVVEKVAQQLNLDDPSKIRLTPHNCYSQQPKPQPIKYRGVDH 871
                D+F L +SR  TYD   +KV + LN++  + +R  P    +   KP+    R  + 
Sbjct: 827  ATDGDEFTLTLSRKMTYDQFSKKVGEHLNVES-THLRFAP--VLASTGKPKQFIKRNPNQ 883

Query: 872  LSDMLVHY--NQTS---------DILYYEILDIPLPELQGLKTLKVAFYHATKDEVVSHT 920
             +  L H    Q S         D LYYE+L+  L + +   TLKV        +     
Sbjct: 884  ANQTLYHILSGQVSGYGYSMHRQDALYYEVLETSLSDYESKTTLKVTLLTEGIVKEQLFE 943

Query: 921  IRLPKQSTVGDVLDDLKTKVELSHPNA-ELRLLEVFYHKIYKVFPPNEKIETINDQYWTL 979
            + +P+  T  D+L  L+ K  L      E+R+ E    KIYK +  + KI  IN +Y TL
Sbjct: 944  VLVPRDGTFADLLAGLQKKANLEDDVVREMRIFEAHSGKIYKEYQEDAKIAGIN-EYVTL 1002

Query: 980  RAEEVPEEEKNLGPHDRLIHVYHFTKDTSQNQMQIQNFGEPFFLVIREGETLTEIKVRIQ 1039
             AE +PEEE  +   +R I+ ++F ++ S+        G PF  V++ GE   E K R+ 
Sbjct: 1003 YAERIPEEELQMQAGERTINAFNFDREPSRPH------GIPFKFVMKPGEIFKETKERLS 1056

Query: 1040 KKLQVPDDEFEKWKFAFF---ALGRPEYLQDSDIVSNRFQRRDVYGAWEQYLGLEHTDNA 1096
            K+  +   +FEK KFA         P YL D DI+S      D+ G  +  LGL+H + +
Sbjct: 1057 KRTGIKGKQFEKIKFAVVPKSLYSNPRYLDDDDILS------DIVGESDDMLGLDHVNKS 1110


>emb|CAD11412.1| conserved hypothetical protein [Neurospora crassa]
            gi|32404970|ref|XP_323098.1| hypothetical protein
            [Neurospora crassa] gi|28922727|gb|EAA31950.1|
            hypothetical protein [Neurospora crassa]
          Length = 1165

 Score =  634 bits (1635), Expect = e-180
 Identities = 416/1121 (37%), Positives = 602/1121 (53%), Gaps = 136/1121 (12%)

Query: 49   VEEPP---QSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVA 105
            ++EPP      +TW I  +  +N KK +  +F  GG+ WR+L+FP GNNVD  S+YL+  
Sbjct: 94   IDEPPILEDQVYTWEIKGWRNLN-KKEHGPIFHAGGFPWRILLFPYGNNVDQCSIYLEHG 152

Query: 106  -DSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDP- 163
             ++  +P  WS   QF+L + N             H+F   ESDWGFT F+ L  L+   
Sbjct: 153  FEADEMPEKWSCCVQFALVLWNPNDPSVFHHHSAHHRFTKEESDWGFTRFLELRRLFSQP 212

Query: 164  ----SRGYLLNDTLVVEAEVLVRRIVDYWT---------YDSKKETGYVGLKNQGATCYM 210
                SR    N+++ + A V   RIV+  T         YDSK+ETGYVGLKNQGATCY+
Sbjct: 213  YDGSSRPLGENESVNISAYV---RIVEDETGVLWHNFNNYDSKQETGYVGLKNQGATCYL 269

Query: 211  NSLLQTLYHIPYFRKAVYHMPTTENDMPAGSIPLALQSLFYKLQYSDTSVATKELTKSFG 270
            NSLLQ+LY    FRK                           LQ S+T+VAT ELTKSFG
Sbjct: 270  NSLLQSLYFTNAFRK---------------------------LQTSNTAVATSELTKSFG 302

Query: 271  WDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRK 330
            W+T   F Q DVQEL+R L E++E+KMKGT  E  + ++F G    +I CINV Y+S+R 
Sbjct: 303  WETRHIFEQQDVQELSRKLMERMEEKMKGTPHEKALAQMFSGKIKTFISCINVPYESSRV 362

Query: 331  ESFYDLQLDVKGCHDVYASFDKYVEVEPLEGDNKYHA-EQYGLQDAKKGVLFIDFPPVLQ 389
            E F+D+QL+V G  ++  SF  Y++VE L+G+N+Y+A ++Y LQDA KGV+F  FP VL 
Sbjct: 363  EDFWDVQLNVSGNKNLLESFQDYIQVEKLDGENQYYAGDEYKLQDANKGVIFQSFPDVLH 422

Query: 390  LQLKRFEYDFMRDTMVKINDRYEFPLELDLDRDDGKYLSPDADRNVRNLYTLHSVLVHSG 449
            LQLKRFEYD  RDTM+KIN RYEFP E D       +L  DADR+    Y LH VLVHSG
Sbjct: 423  LQLKRFEYDIQRDTMMKINARYEFPEEFDA----APFLEKDADRSEPWEYELHGVLVHSG 478

Query: 450  GVHGGHYYAFIRPTLSDQWYKFDDERVTKEDTKRALEEQYGGEEELPQTNPGFNNTPFKF 509
             ++ GHYYAF++PT    WYK+DD++VTK      LE+ +GG   LP  N      P K 
Sbjct: 479  DLNTGHYYAFLKPTKDGNWYKYDDDKVTKARKLEVLEDNFGGPFRLP--NGQIRTLPQKK 536

Query: 510  T---KYSNAYMLVYIREADKDKVICNVDEKDIAEHLRERLKKEQEEKEHKKKEKAEAHLY 566
            T   + ++AYMLVYIR++  D+++  V E+D   HLR R  +E   +E ++KE+ E HLY
Sbjct: 537  TPIMRPNSAYMLVYIRKSRIDQILTQVTEEDTPPHLRNRFAEELAAREARRKEREEQHLY 596

Query: 567  TIIKVARNEDLKEQIGKDI-YFDLV---DHDKVRSFRVQKQMSFNLFKEEVAKEFGIPVQ 622
              +KV      +E  G D+ YFD     D      +RV +Q +      ++A + G   +
Sbjct: 597  IGVKVVTEATFQEHGGTDLTYFDTTPDQDPGAPIYYRVLRQDTMEQLVAKIAADLGQDPK 656

Query: 623  FQRFWLWAKRQNHTYRPNRPLTPAEEAQSVGQVREVSNKVHNAELKLFLEV--ELGPDLR 680
              R W+   RQN T RP+ P+   + A +V +    +    +  L+++ EV  E+  D  
Sbjct: 657  RVRLWIMVNRQNKTVRPDVPI--MDLALTVEETYSKATAQRDESLRVWAEVAEEVNADGE 714

Query: 681  PIAPSDK-------TKDDILLFFKLYDPEKEELRYVGRLFVKSTGKPSEILTRLNEMAGY 733
            PI PS +        KD+ILLF K +D E + LR VG ++V+   K  +++  + +  G+
Sbjct: 715  PIWPSHQAQANGAIVKDNILLFLKWFDVESQTLRGVGHVYVRLDKKVEDLVPVILKKMGW 774

Query: 734  ----DPDEEIGLYEEIKFEPNVMCEPIDKKLTFRASQLEDGDIICFQKA----------- 778
                   E+I L+EEIK     M EP+  K T +  +L+DGDIICFQ+            
Sbjct: 775  GEKVPSGEKIQLWEEIK---PTMVEPLRGKETLKTEELQDGDIICFQRTHVHKSRLGLGE 831

Query: 779  --PAMDSEEHVRYPDVPSYLEYVHNRQVVHF----RSLDKPKEDDFCLEMSRLYTYDDVV 832
              P+ D++   +  D   Y +++++R+VV F    +  D  +   F L +S   +YD + 
Sbjct: 832  SKPSEDAKSSDKLTDAREYYDFLYHRKVVRFCPHPQKADVQQYPQFELVLSSKMSYDKLS 891

Query: 833  EKVAQQLNLDDPSKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLV------------HYN 880
            EKV + + + +P+ IR    N  +  P+        V  LS+  V            + N
Sbjct: 892  EKVGEHIGV-EPTHIRFYTINGANGNPR------TAVKKLSNQTVERILTPPGYGQMNLN 944

Query: 881  QTSDILYYEILDIPLPELQGLKTLKVAFYHATKDEVVSHTIRLPKQSTVGDVLDDL--KT 938
            Q SD LYYE+LDI L EL   K+LKV +      +   + + + K   V D+++ L  K 
Sbjct: 945  QLSDALYYEVLDISLAELDTKKSLKVTWLSEGITKEDQYDLLVTKSGVVEDLIETLVKKA 1004

Query: 939  KVELSHPNAELRLLEVFYHKIYKVFPPNEKIETINDQYWTLRAEEVPEEEKNLGPHDRLI 998
            K+       ++R+ EV  +K Y+    N  + +IN +Y T+ AE  PEEE  +   ++ I
Sbjct: 1005 KIPGEEEAGQIRVYEVSNNKWYRDLDRNYPVISIN-EYTTVVAERKPEEEIGVTDPNQYI 1063

Query: 999  HVYHFTKDTSQNQMQIQNFGEPFFLVIREGETLTEIKVRIQKKLQVPDDEFEKWKFAFF- 1057
             V+HF  + S+        G  F  +I+EGE  +E K R++K+L +    FEK KFA   
Sbjct: 1064 TVFHFQNEPSRAH------GMSFRFLIKEGEPFSETKKRLEKRLGIKGKSFEKIKFAVVR 1117

Query: 1058 --ALGRPEYLQDSDIVSNRFQRRDVYGAWEQYLGLEHTDNA 1096
                 RP YLQD DI+  + ++ D       YLGL+H D +
Sbjct: 1118 RAQFSRPIYLQDDDILYEKAEKED-------YLGLDHVDRS 1151


>gb|EAA77241.1| hypothetical protein FG07382.1 [Gibberella zeae PH-1]
            gi|46126009|ref|XP_387558.1| hypothetical protein
            FG07382.1 [Gibberella zeae PH-1]
          Length = 1212

 Score =  634 bits (1634), Expect = e-180
 Identities = 408/1164 (35%), Positives = 621/1164 (53%), Gaps = 125/1164 (10%)

Query: 1    MTVMTPAPIDQQEDEEMLVPHTDLP-ENNHQPMEVVAQPEAAPTVESQPVEEPP---QSR 56
            + ++ P   +Q E +++     DLP   +H+ M+ +  P          ++EP       
Sbjct: 89   VAIIDPDSFEQSEADQL----QDLPLATDHEAMKEICLPPL--------IDEPKILGDYD 136

Query: 57   FTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTN-LPYGWS 115
            +TW +DN+  +N KK +  VF  GG+ WR+L+FP GNN+D  S+YL+    T+ +P  WS
Sbjct: 137  YTWTVDNWRSLN-KKEHGPVFQAGGFPWRILLFPHGNNIDQCSIYLEHGFETDEVPDNWS 195

Query: 116  RYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYD-----PSRGYLLN 170
               QF+L + N       +     H+F   E DWGFT F+    +++      SR    N
Sbjct: 196  CCVQFALVLWNPNDPSLYIHHTAHHRFTKEEGDWGFTRFVEHRRMFNVPWEGSSRPLCEN 255

Query: 171  DTLVVEAEVLVRRIVD---------YWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIP 221
            DT  + A V   R+V+         +  YDSKKETGYVGLKNQGATCY+NSL+Q+LY   
Sbjct: 256  DTANITAYV---RLVEDETGVLWHNFANYDSKKETGYVGLKNQGATCYLNSLMQSLYFTN 312

Query: 222  YFRKA--VYHMPTTENDMPAGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQ 279
             FRKA  +Y +PT E D    +    LQ LFY+LQ SD +V T ELTKSFGWDT   F Q
Sbjct: 313  KFRKARAIYEIPT-EADPSMHNSAYTLQRLFYQLQTSDQAVGTTELTKSFGWDTRHIFEQ 371

Query: 280  HDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLD 339
             DVQE +R L E++EDKMKGT  +  + ++F G    YI CINVDY+S+R E F+D+QL+
Sbjct: 372  QDVQEFSRKLMERMEDKMKGTPAQNVLPEMFSGKIKTYISCINVDYESSRIEDFWDIQLN 431

Query: 340  VKGCHDVYASFDKYVEVEPLEGDNKYHA-EQYGLQDAKKGVLFIDFPPVLQLQLKRFEYD 398
            V G  ++  SF+ YV+VE ++G+N+Y A +QY LQDA KGV+F  FP VL LQLKRFEYD
Sbjct: 432  VSGNKNLLESFEDYVQVEKMDGENQYFAGDQYKLQDANKGVIFNSFPDVLHLQLKRFEYD 491

Query: 399  FMRDTMVKINDRYEFPLELDLDRDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYA 458
              RDTM+KINDRYEFP   D       YLS DAD++V   Y LHSVLVHSG ++ GHYYA
Sbjct: 492  IQRDTMMKINDRYEFPEFFDA----APYLSEDADKSVPWTYQLHSVLVHSGDLNAGHYYA 547

Query: 459  FIRPTLSDQWYKFDDERVTKEDTKRALEEQYGGEEELPQTNPGFN-NTPFKFTKYSNAYM 517
            F++P     +YK+DD++VTK   +  +EE +GGE +     P           + ++AYM
Sbjct: 548  FLKPEKDGWFYKYDDDKVTKATMREVMEENFGGEYQAANGYPRATVQKKAPIMRQNSAYM 607

Query: 518  LVYIREADKDKVICNVDEKDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARNEDL 577
            LVYIR++    ++C V + +I  HLR++  +E  ++E +KKE  EAHLY   KV  +   
Sbjct: 608  LVYIRQSRLGDILCPVTKDNIPLHLRQKFDEETVQREARKKEAREAHLYMWAKVITDYSF 667

Query: 578  KEQIGKDI-YFDL---VDHDKVRSFRVQKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQ 633
            ++  G D+  FD     D    + +RV++ M+   F  +VA +     +  R WL   RQ
Sbjct: 668  QQFGGTDLCQFDANPESDPAAPKFYRVRRAMTMEEFVAQVAADMNEDPRRVRLWLMVNRQ 727

Query: 634  NHTYRPNRPLTPAEEAQSVGQVREVSNKVHNAELKLFLEV--ELGPDLRPIAPSDKTK-- 689
            N T RP++P+            R  +++  +  L+++ EV  E+  D  PI PS +++  
Sbjct: 728  NKTIRPDQPIMDLRPTVDETYSRSAAHR--DTSLRVWAEVAEEVNADGEPIWPSYQSQPN 785

Query: 690  ------DDILLFFKLYDPEKEELRYVGRLFVKSTGKPSEILTRLNEMAGY----DPDEEI 739
                  D ILL  K +D + + LR VG +++    K  E+L  + +  G+      +E++
Sbjct: 786  GVIVKNDTILLLLKHFDIDAQTLRGVGHVYISKEKKVEELLPMILKKMGWGEKLPAEEKL 845

Query: 740  GLYEEIKFEPNVMCEPIDKKLTFRASQLEDGDIICFQ------------KAPAMDSEEHV 787
             L+E +K                  ++L+DGDIICFQ            KA    +    
Sbjct: 846  LLWESLKI-----------------AELQDGDIICFQRTKANGEKRAGDKASQESNNTSD 888

Query: 788  RYPDVPSYLEYVHNRQVVHFR----SLDKPKEDDFCLEMSRLYTYDDVVEKVAQQLNLDD 843
             + D   Y +++ +R++V F       D  +   F L ++   TYD + E+V   L++  
Sbjct: 889  HFEDAREYYDFLEHRRMVKFHPHPTRCDPAQYPPFDLVLNSKITYDMLSERVGAYLDV-Q 947

Query: 844  PSKIRLTPHNCYSQQPK------PQPIKYRGVDHLSDMLVHYNQTSDILYYEILDIPLPE 897
            P+ IR    N  +Q PK        P   + +  +    ++  Q +D  Y+E+L++ L E
Sbjct: 948  PTHIRFWTVNASTQNPKTPVRRGANPTLRQILSPMGSTALNSTQRNDAFYFEVLEMSLTE 1007

Query: 898  LQGLKTLKVAFYH--ATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELS--HPNAELRLLE 953
            L   K++KV       TK+   ++ + +PK  T+ D+++ L  K ++S    +  +R+ E
Sbjct: 1008 LDTKKSIKVTLLSEGITKETQDTYDLLVPKTGTMDDLVEALIKKAQISGEAESGRIRIYE 1067

Query: 954  VFYHKIYKVFPPNEKIETINDQYWTLRAEEVPEEEKNLGPHDRLIHVYHFTKDTSQNQMQ 1013
               ++ Y+  P +  +  +N +Y T+ AE VP+EE +    ++ + V+H+  D S+    
Sbjct: 1068 TSSNRFYREPPRDHPVINLN-EYATVYAERVPQEEVS-ADDNQFVQVFHYQNDVSRVH-- 1123

Query: 1014 IQNFGEPFFLVIREGETLTEIKVRIQKKLQVPDDEFEKWKFAFFA---LGRPEYLQDSDI 1070
                G PF  ++ EGE   + K R++K+  +    FEK K A        +P+YL D D+
Sbjct: 1124 ----GVPFKFLVIEGENFADTKKRLEKRTGIKGKSFEKIKIAVVRRSNYSKPQYLNDDDV 1179

Query: 1071 VSNRFQRRDVYGAWEQYLGLEHTD 1094
            +S   Q  D       YLGL+H D
Sbjct: 1180 LSTLVQGED------DYLGLDHVD 1197


>ref|NP_001019961.1| ubiquitin specific protease 7 (herpes virus-associated) [Rattus
            norvegicus] gi|49823179|gb|AAT68666.1| HAUSP [Rattus
            norvegicus]
          Length = 1103

 Score =  628 bits (1620), Expect = e-178
 Identities = 414/1139 (36%), Positives = 615/1139 (53%), Gaps = 82/1139 (7%)

Query: 9    IDQQEDEEMLVPHTDLPENNHQPMEV---VAQPEAAPTVESQPVEEPP---QSRFTWRID 62
            + + ED EM    TD P    Q   +   VA  +     E    ++     ++ F + ++
Sbjct: 18   LSEPEDMEMEAGDTDDPPRITQNPVINGNVALSDGHSNAEEDMEDDTSWRSEATFQFTVE 77

Query: 63   NFSRMNVKKLYSEVFVVGGYKWRVLIFPK-------GNNVDYLSMYLDVADSTNLPYGWS 115
             FSR++   L    FV     W++++ P+         +V +       +DST+    WS
Sbjct: 78   RFSRLSESVLSPPCFV-RNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESDSTS----WS 132

Query: 116  RYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVV 175
             +AQ  L ++N   +  +  +   H F  +E+DWGF++FM   E+ DP +G++ +D   V
Sbjct: 133  CHAQAVLKIINYRDDDKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDK--V 190

Query: 176  EAEVLVRRIVDYWT-YDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTE 234
              EV V+    +   +DSKK TGYVGLKNQGATCYMNSLLQTL+     RKAVY MPT E
Sbjct: 191  TFEVFVQADAPHGVAWDSKKHTGYVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPT-E 249

Query: 235  NDMPAGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLE 294
             D  + S+PLALQ +FY+LQ+SD  V TK+LTKSFGW+T DSFMQHDVQEL RVL + +E
Sbjct: 250  GDDSSKSVPLALQRVFYELQHSDKPVGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVE 309

Query: 295  DKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFDKYV 354
            +KMKGT VEGTI KLF G  ++YI+C  VDY+S R+E +YD+QL +KG  +++ SF  YV
Sbjct: 310  NKMKGTCVEGTIPKLFRGKMVSYIQCKEVDYRSDRREDYYDIQLSIKGKKNIFESFVDYV 369

Query: 355  EVEPLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFP 414
             VE L+GDNKY A ++GLQ+A+KGV F+  PPVL LQL RF YD   D  +KINDR+EFP
Sbjct: 370  AVEQLDGDNKYDAGEHGLQEAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFEFP 429

Query: 415  LELDLDRDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDE 474
             +L LD    ++L     ++  N Y LH+VLVHSG  HGGHY  ++ P    +W KFDD+
Sbjct: 430  EQLPLD----EFLQKTDPKDPAN-YILHAVLVHSGDNHGGHYVVYLNPKGDGKWCKFDDD 484

Query: 475  RVTKEDTKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIREADKDKVICNVD 534
             V++   + A+E  YGG ++                  +NAYMLVYIRE+   +V+  V 
Sbjct: 485  VVSRCTKEEAIEHNYGGHDD-----------DLSVRHCTNAYMLVYIRESKLSEVLQAVT 533

Query: 535  EKDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARNEDLKEQIGKDIYFDLVDHDK 594
            + DI + L ERL++E+  +  K+KE+ EAHLY  +++   +      G D+Y    D +K
Sbjct: 534  DHDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQFCGHQGNDMY----DEEK 589

Query: 595  VR--SFRVQKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPAEEAQSV 652
            VR   F+V K  S   F + +++  G P    R W    R N T RP      A+ ++++
Sbjct: 590  VRYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKRPAMLDNEADGSKTM 649

Query: 653  GQVREVSNKVHNAELKLFLEVELGPDLR---PIAPSDKTKDDILLFFKLYDPEKEELRYV 709
             ++ +  N        +FLE  + P+L       P      D++LF K+YDP+   L Y 
Sbjct: 650  IELSDNEN-----PWTIFLET-VDPELAASGATLPKFDKDHDVMLFLKMYDPKTRSLNYC 703

Query: 710  GRLFVKSTGKPSEILTRLNEMAGYDPDEEIGLYEEIKFEPNVMCEPIDKKLTFRASQLED 769
            G ++   + K  ++L  + + AG+  D  + LYEE+K       +  D  L     +L D
Sbjct: 704  GHIYTPISCKIRDLLPVMCDRAGFIQDTSLILYEEVKPNLTERIQDYDVSLDKALDELMD 763

Query: 770  GDIICFQK-APAMDSEEHVRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLYTY 828
            GDII FQK  P  D+ E    P    Y   +++R  V F     P +  F + +S    Y
Sbjct: 764  GDIIVFQKDDPENDNSE---LPTAKEYFRDLYHRVDVIFCDKTIPNDPGFVVTLSNRMNY 820

Query: 829  DDVVEKVAQQLNLDDPSKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLVHYN-QTSDILY 887
              V + VAQ+LN  DP  ++      Y   P   P+++     L D+L  +  +    LY
Sbjct: 821  FQVAKTVAQRLN-TDPMLLQFFKSQGYRDGP-GNPLRHNYEGTLRDLLQFFKPRQPKKLY 878

Query: 888  YEILDIPLPELQGLKTLKVAFYHAT-KDEVVSHTIRLPKQSTVGDVLDDLKTKVEL-SHP 945
            Y+ L + + + +  ++ K  + ++  ++E +  T+   K   V D+L++ K  VEL    
Sbjct: 879  YQQLKMKITDFENRRSFKCIWLNSQFREEEI--TLYPDKHGCVRDLLEECKKAVELGDEA 936

Query: 946  NAELRLLEVFYHKIYKVFPPNEKIETIND-QYWTLRAEEVPEEEKNLG-PHDRLIHVYHF 1003
            +  LRLLE+  +KI  V   +E +E ++     T R EE+P ++ N+   ++ LI V HF
Sbjct: 937  SGRLRLLEIVSYKIIGVHQEDELLECLSPATSRTFRIEEIPLDQVNIDKENEMLITVAHF 996

Query: 1004 TKDTSQNQMQIQNFGEPFFLVIREGETLTEIKVRIQKKLQVPDDEFEKWKFAFFALGRPE 1063
             K+          FG PF L I +GE   E+  RIQ  L + + EFEK+KFA   +GR +
Sbjct: 997  HKEV------FGTFGIPFLLRIHQGEHFREVMKRIQSLLDIQEKEFEKFKFAIVMMGRHQ 1050

Query: 1064 YLQDSDIVSNRFQRRDVYGAWEQ---YLGLEHTDNAPKRSYAVNQNRHTF-EKPVKIYN 1118
            Y+ + +   N        G       +LGL+H + APKRS      R+T+ EK +KI+N
Sbjct: 1051 YINEDEYEVNLKDFEPQPGNMSHPRPWLGLDHFNKAPKRS------RYTYLEKAIKIHN 1103


>ref|XP_592719.1| PREDICTED: similar to ubiquitin specific protease 7, partial [Bos
            taurus]
          Length = 1075

 Score =  627 bits (1618), Expect = e-178
 Identities = 402/1088 (36%), Positives = 602/1088 (54%), Gaps = 76/1088 (6%)

Query: 54   QSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPK-------GNNVDYLSMYLDVAD 106
            ++ F + ++ FSR++   L    FV     W++++ P+         +V +       +D
Sbjct: 41   EATFQFTVERFSRLSESVLSPPCFV-RNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESD 99

Query: 107  STNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRG 166
            ST+    WS +AQ  L ++N   ++ +  +   H F  +E+DWGF++FM   E+ DP +G
Sbjct: 100  STS----WSCHAQAVLKIINYRDDEKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKG 155

Query: 167  YLLNDTLVVEAEVLVRRIVDYWT-YDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRK 225
            ++ +D   V  EV V+    +   +DSKK TGYVGLKNQGATCYMNSLLQTL+     RK
Sbjct: 156  FIDDDK--VTFEVFVQADAPHGVAWDSKKHTGYVGLKNQGATCYMNSLLQTLFFTNQLRK 213

Query: 226  AVYHMPTTENDMPAGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQEL 285
            AVY MPT E D  + S+PLALQ +FY+LQ+SD  V TK+LTKSFGW+T DSFMQHDVQEL
Sbjct: 214  AVYMMPT-EGDDSSKSVPLALQRVFYELQHSDKPVGTKKLTKSFGWETLDSFMQHDVQEL 272

Query: 286  NRVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHD 345
             RVL + +E+KMKGT VEGTI KLF G  ++YI+C  VDY+S R+E +YD+QL +KG  +
Sbjct: 273  CRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKEVDYRSDRREDYYDIQLSIKGKKN 332

Query: 346  VYASFDKYVEVEPLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMV 405
            ++ SF  YV VE L+GDNKY A ++GLQ+A+KGV F+  PPVL LQL RF YD   D  +
Sbjct: 333  IFESFVDYVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNI 392

Query: 406  KINDRYEFPLELDLDRDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLS 465
            KINDR+EFP +L LD    ++L     ++  N Y LH+VLVHSG  HGGHY  ++ P   
Sbjct: 393  KINDRFEFPEQLPLD----EFLQKTDPKDPAN-YILHAVLVHSGDNHGGHYVVYLNPKGD 447

Query: 466  DQWYKFDDERVTKEDTKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIREAD 525
             +W KFDD+ V++   + A+E  YGG ++                  +NAYMLVYIRE+ 
Sbjct: 448  GKWCKFDDDVVSRCTKEEAIEHNYGGHDD-----------DLSVRHCTNAYMLVYIRESK 496

Query: 526  KDKVICNVDEKDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARNEDLKEQIGKDI 585
              +V+  V ++DI + L ERL++E+  +  K+KE+ EAHLY  +++   +      G D+
Sbjct: 497  LSEVLQAVTDQDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQFCGHQGNDM 556

Query: 586  YFDLVDHDKVR--SFRVQKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPL 643
            Y    D +KVR   F+V K  S + F + +++  G P    R W    R N T RP    
Sbjct: 557  Y----DEEKVRYTVFKVLKNSSLSEFVQNLSQTMGFPQDQIRLWPMQARSNGTKRPAMLD 612

Query: 644  TPAEEAQSVGQVREVSNKVHNAELKLFLEVELGPDLR---PIAPSDKTKDDILLFFKLYD 700
              A+ ++++ ++ +  N        +FLE  + P+L       P      D++LF K+YD
Sbjct: 613  NEADGSKTMIELSDNEN-----PWTIFLET-VDPELAASGATLPKFDKDHDVMLFLKMYD 666

Query: 701  PEKEELRYVGRLFVKSTGKPSEILTRLNEMAGYDPDEEIGLYEEIKFEPNVMCEPIDKKL 760
            P+   L Y G ++   + K  ++L  + + AG+  D  + LYEE+K       +  D  L
Sbjct: 667  PKTRSLNYCGHIYTPISCKIRDLLPVMCDRAGFIQDTSLILYEEVKPNLTERIQDYDVSL 726

Query: 761  TFRASQLEDGDIICFQK-APAMDSEEHVRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFC 819
                 +L DGDII FQK  P  D+ E    P    Y   +++R  V F     P +  F 
Sbjct: 727  DKALDELMDGDIIVFQKDDPENDNSE---LPTAKEYFRDLYHRVDVIFCDKTIPNDPGFV 783

Query: 820  LEMSRLYTYDDVVEKVAQQLNLDDPSKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLVHY 879
            + +S    Y  V + VAQ+LN  DP  ++      Y   P   P+++     L D+L  +
Sbjct: 784  VTLSNRMNYFQVAKTVAQRLN-TDPMLLQFFKSQGYRDGP-GNPLRHNYEGTLRDLLQFF 841

Query: 880  N-QTSDILYYEILDIPLPELQGLKTLKVAFYHAT-KDEVVSHTIRLPKQSTVGDVLDDLK 937
              +    LYY+ L + + + +  ++ K  + ++  ++E +  T+   K   V D+L++ K
Sbjct: 842  KPRQPKKLYYQQLKMKITDFENRRSFKCIWLNSQFREEEI--TLYPDKHGCVRDLLEECK 899

Query: 938  TKVELSH-PNAELRLLEVFYHKIYKVFPPNEKIETIND-QYWTLRAEEVPEEEKNLG-PH 994
              VEL    + +LRLLE+  +KI  V   +E +E ++     T R EE+P ++ ++   +
Sbjct: 900  KAVELGEKASGKLRLLEIVSYKIIGVHQEDELLECLSPATSRTFRIEEIPLDQVDIDKEN 959

Query: 995  DRLIHVYHFTKDTSQNQMQIQNFGEPFFLVIREGETLTEIKVRIQKKLQVPDDEFEKWKF 1054
            + LI V HF K+          FG PF L I +GE   E+  RIQ  L + + EFEK+KF
Sbjct: 960  EMLITVAHFHKEV------FGTFGIPFLLRIHQGEHFREVMKRIQSLLDIQEKEFEKFKF 1013

Query: 1055 AFFALGRPEYLQDSDIVSNRFQRRDVYGAWEQ---YLGLEHTDNAPKRSYAVNQNRHTF- 1110
            A   +GR +Y+ + +   N        G       +LGL+H + APKRS      R+T+ 
Sbjct: 1014 AIVMMGRHQYINEDEYEVNLKDFEPQPGNMSHPRPWLGLDHFNKAPKRS------RYTYL 1067

Query: 1111 EKPVKIYN 1118
            EK +KI+N
Sbjct: 1068 EKAIKIHN 1075


>emb|CAA96580.1| herpesvirus associated ubiquitin-specific protease (HAUSP) [Homo
            sapiens] gi|2501460|sp|Q93009|UBP7_HUMAN Ubiquitin
            carboxyl-terminal hydrolase 7 (Ubiquitin thiolesterase 7)
            (Ubiquitin-specific processing protease 7)
            (Deubiquitinating enzyme 7) (Herpesvirus associated
            ubiquitin-specific protease) gi|4507857|ref|NP_003461.1|
            ubiquitin specific protease 7 (herpes virus-associated)
            [Homo sapiens]
          Length = 1102

 Score =  625 bits (1612), Expect = e-177
 Identities = 412/1139 (36%), Positives = 616/1139 (53%), Gaps = 82/1139 (7%)

Query: 9    IDQQEDEEMLVPHTDLPENNHQPMEV---VAQPEAAPTVESQPVEEPP---QSRFTWRID 62
            + + ED EM    TD P    Q   +   VA  +   T E    ++     ++ F + ++
Sbjct: 17   LSEPEDMEMEAGDTDDPPRITQNPVINGNVALSDGHNTAEEDMEDDTSWRSEATFQFTVE 76

Query: 63   NFSRMNVKKLYSEVFVVGGYKWRVLIFPK-------GNNVDYLSMYLDVADSTNLPYGWS 115
             FSR++   L    FV     W++++ P+         +V +       +DST+    WS
Sbjct: 77   RFSRLSESVLSPPCFV-RNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESDSTS----WS 131

Query: 116  RYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVV 175
             +AQ  L ++N   ++ +  +   H F  +E+DWGF++FM   E+ DP +G++ +D   V
Sbjct: 132  CHAQAVLKIINYRDDEKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDK--V 189

Query: 176  EAEVLVRRIVDYWT-YDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTE 234
              EV V+    +   +DSKK TGYVGLKNQGATCYMNSLLQTL+     RKAVY MPT E
Sbjct: 190  TFEVFVQADAPHGVAWDSKKHTGYVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPT-E 248

Query: 235  NDMPAGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLE 294
             D  + S+PLALQ +FY+LQ+SD  V TK+LTKSFGW+T DSFMQHDVQEL RVL + +E
Sbjct: 249  GDDSSKSVPLALQRVFYELQHSDKPVGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVE 308

Query: 295  DKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFDKYV 354
            +KMKGT VEGTI KLF G  ++YI+C  VDY+S R+E +YD+QL +KG  +++ SF  YV
Sbjct: 309  NKMKGTCVEGTIPKLFRGKMVSYIQCKEVDYRSDRREDYYDIQLSIKGKKNIFESFVDYV 368

Query: 355  EVEPLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFP 414
             VE L+GDNKY A ++GLQ+A+KGV F+  PPVL LQL RF YD   D  +KINDR+EFP
Sbjct: 369  AVEQLDGDNKYDAGEHGLQEAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFEFP 428

Query: 415  LELDLDRDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDE 474
             +L LD    ++L     ++  N Y LH+VLVHSG  HGGHY  ++ P    +W KFDD+
Sbjct: 429  EQLPLD----EFLQKTDPKDPAN-YILHAVLVHSGDNHGGHYVVYLNPKGDGKWCKFDDD 483

Query: 475  RVTKEDTKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIREADKDKVICNVD 534
             V++   + A+E  YGG ++                  +NAYMLVYIRE+   +V+  V 
Sbjct: 484  VVSRCTKEEAIEHNYGGHDD-----------DLSVRHCTNAYMLVYIRESKLSEVLQAVT 532

Query: 535  EKDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARNEDLKEQIGKDIYFDLVDHDK 594
            + DI + L ERL++E+  +  K+KE+ EAHLY  +++   +      G D+Y    D +K
Sbjct: 533  DHDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQFCGHQGNDMY----DEEK 588

Query: 595  VR--SFRVQKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPAEEAQSV 652
            V+   F+V K  S   F + +++  G P    R W    R N T RP      A+  +++
Sbjct: 589  VKYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKRPAMLDNEADGNKTM 648

Query: 653  GQVREVSNKVHNAELKLFLEVELGPDLR---PIAPSDKTKDDILLFFKLYDPEKEELRYV 709
             ++ +  N        +FLE  + P+L       P      D++LF K+YDP+   L Y 
Sbjct: 649  IELSDNEN-----PWTIFLET-VDPELAASGATLPKFDKDHDVMLFLKMYDPKTRSLNYC 702

Query: 710  GRLFVKSTGKPSEILTRLNEMAGYDPDEEIGLYEEIKFEPNVMCEPIDKKLTFRASQLED 769
            G ++   + K  ++L  + + AG+  D  + LYEE+K       +  D  L     +L D
Sbjct: 703  GHIYTPISCKIRDLLPVMCDRAGFIQDTSLILYEEVKPNLTERIQDYDVSLDKALDELMD 762

Query: 770  GDIICFQK-APAMDSEEHVRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLYTY 828
            GDII FQK  P  D+ E    P    Y   +++R  V F     P +  F + +S    Y
Sbjct: 763  GDIIVFQKDDPENDNSE---LPTAKEYFRDLYHRVDVIFCDKTIPNDPGFVVTLSNRMNY 819

Query: 829  DDVVEKVAQQLNLDDPSKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLVHYN-QTSDILY 887
              V + VAQ+LN  DP  ++      Y   P   P+++     L D+L  +  +    LY
Sbjct: 820  FQVAKTVAQRLN-TDPMLLQFFKSQGYRDGP-GNPLRHNYEGTLRDLLQFFKPRQPKKLY 877

Query: 888  YEILDIPLPELQGLKTLKVAFYHAT-KDEVVSHTIRLPKQSTVGDVLDDLKTKVELSH-P 945
            Y+ L + + + +  ++ K  + ++  ++E +  T+   K   V D+L++ K  VEL    
Sbjct: 878  YQQLKMKITDFENRRSFKCIWLNSQFREEEI--TLYPDKHGCVRDLLEECKKAVELGEKA 935

Query: 946  NAELRLLEVFYHKIYKVFPPNEKIETIND-QYWTLRAEEVPEEEKNLG-PHDRLIHVYHF 1003
            + +LRLLE+  +KI  V   +E +E ++     T R EE+P ++ ++   ++ L+ V HF
Sbjct: 936  SGKLRLLEIVSYKIIGVHQEDELLECLSPATSRTFRIEEIPLDQVDIDKENEMLVTVAHF 995

Query: 1004 TKDTSQNQMQIQNFGEPFFLVIREGETLTEIKVRIQKKLQVPDDEFEKWKFAFFALGRPE 1063
             K+          FG PF L I +GE   E+  RIQ  L + + EFEK+KFA    GR +
Sbjct: 996  HKEV------FGTFGIPFLLRIHQGEHFREVMKRIQSLLDIQEKEFEKFKFAIVMTGRHQ 1049

Query: 1064 YLQDSDIVSNRFQRRDVYGAWEQ---YLGLEHTDNAPKRSYAVNQNRHTF-EKPVKIYN 1118
            Y+ + +   N        G       +LGL+H + APKRS      R+T+ EK +KI+N
Sbjct: 1050 YINEDEYEVNLKDFEPQPGNMSHPRPWLGLDHFNKAPKRS------RYTYLEKAIKIHN 1102


>gb|AAQ82908.1| ubiquitin-specific protease 7 isoform [Homo sapiens]
          Length = 1112

 Score =  624 bits (1609), Expect = e-177
 Identities = 415/1157 (35%), Positives = 619/1157 (52%), Gaps = 102/1157 (8%)

Query: 7    APIDQQEDEEMLVPHTDLPENNHQPMEVVAQPEAAPTVESQPV--------------EEP 52
            +PI QQ     L  H ++  N+   +E     +  P +   PV              EE 
Sbjct: 13   SPIPQQRP---LQSHAEMAGNHRLGLEA-GDTDDPPRITQNPVINGNVALSDGHNTAEED 68

Query: 53   PQSRFTWR--------IDNFSRMNVKKLYSEVFVVGGYKWRVLIFPK-------GNNVDY 97
             +   +WR        ++ FSR++   L    FV     W++++ P+         +V +
Sbjct: 69   MEDDTSWRSEATFQFTVERFSRLSESVLSPPCFV-RNLPWKIMVMPRFYPDRPHQKSVGF 127

Query: 98   LSMYLDVADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPL 157
                   +DST+    WS +AQ  L ++N   ++ +  +   H F  +E+DWGF++FM  
Sbjct: 128  FLQCNAESDSTS----WSCHAQAVLKIINYRDDEKSFSRRISHLFFHKENDWGFSNFMAW 183

Query: 158  GELYDPSRGYLLNDTLVVEAEVLVRRIVDYWT-YDSKKETGYVGLKNQGATCYMNSLLQT 216
             E+ DP +G++ +D   V  EV V+    +   +DSKK TGYVGLKNQGATCYMNSLLQT
Sbjct: 184  SEVTDPEKGFIDDDK--VTFEVFVQADAPHGVAWDSKKHTGYVGLKNQGATCYMNSLLQT 241

Query: 217  LYHIPYFRKAVYHMPTTENDMPAGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDS 276
            L+     RKAVY MPT E D  + S+PLALQ +FY+LQ+SD  V TK+LTKSFGW+T DS
Sbjct: 242  LFFTNQLRKAVYMMPT-EGDDSSKSVPLALQRVFYELQHSDKPVGTKKLTKSFGWETLDS 300

Query: 277  FMQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDL 336
            FMQHDVQEL RVL + +E+KMKGT VEGTI KLF G  ++YI+C  VDY+S R+E +YD+
Sbjct: 301  FMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKEVDYRSDRREDYYDI 360

Query: 337  QLDVKGCHDVYASFDKYVEVEPLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFE 396
            QL VKG  +++ SF  YV VE L+GDNKY A ++GLQ+A+KGV F+  PPVL LQLKRF 
Sbjct: 361  QLSVKGKKNIFESFVDYVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTLPPVLHLQLKRFM 420

Query: 397  YDFMRDTMVKINDRYEFPLELDLDRDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHY 456
            YD   D  +KINDR+EFP +L LD    ++L     ++  N Y LH+VLVHSG  HGGHY
Sbjct: 421  YDPQTDQNIKINDRFEFPEQLPLD----EFLQKTDPKDPAN-YILHAVLVHSGDNHGGHY 475

Query: 457  YAFIRPTLSDQWYKFDDERVTKEDTKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAY 516
              ++ P    +W KFDD+ V++   + A+E  YGG ++                  +NAY
Sbjct: 476  VVYLNPKGDGKWCKFDDDVVSRCTKEEAIEHNYGGHDD-----------DLSVRHCTNAY 524

Query: 517  MLVYIREADKDKVICNVDEKDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARNED 576
            MLVYIRE+   +V+  V + DI + L ERL++E+  +  K+KE+ EAHLY  +++   + 
Sbjct: 525  MLVYIRESKLSEVLQAVTDHDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQ 584

Query: 577  LKEQIGKDIYFDLVDHDKVR--SFRVQKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQN 634
                 G D+Y    D +KV+   F+V K  S     + +++  G P    R W    R N
Sbjct: 585  FCGHQGNDMY----DEEKVKYTVFKVLKNSSLAELVQSLSQTMGFPQDQIRLWPMQARSN 640

Query: 635  HTYRPNRPLTPAEEAQSVGQVREVSNKVHNAELKLFLEVELGPDLR---PIAPSDKTKDD 691
             T RP      A+  +++ ++ +  N        +FLE  + P+L       P      D
Sbjct: 641  GTKRPAMLDNEADGNKTMIELSDNEN-----PWTIFLET-VDPELAASGATLPKFDKDHD 694

Query: 692  ILLFFKLYDPEKEELRYVGRLFVKSTGKPSEILTRLNEMAGYDPDEEIGLYEEIKFEPNV 751
            ++LF K+YDP+   L Y G ++   + K  ++L  + + AG+  D  + LYEE+K     
Sbjct: 695  VMLFLKMYDPKTRSLNYCGHIYTPISCKIRDLLPVMCDRAGFIQDTSLILYEEVKPNLTE 754

Query: 752  MCEPIDKKLTFRASQLEDGDIICFQK-APAMDSEEHVRYPDVPSYLEYVHNRQVVHFRSL 810
              +  D  L     +L DGDII FQK  P  D+ E    P    Y   +++R  V F   
Sbjct: 755  RIQDYDVSLDKALDELMDGDIIVFQKDDPENDNSE---LPTAKEYFRDLYHRVDVIFCDK 811

Query: 811  DKPKEDDFCLEMSRLYTYDDVVEKVAQQLNLDDPSKIRLTPHNCYSQQPKPQPIKYRGVD 870
              P +  F + +S    Y  V + VAQ+LN  DP  ++      Y   P   P+++    
Sbjct: 812  TIPNDPGFVVTLSNRMNYFQVAKTVAQRLN-TDPMLLQFFKSQGYRDGP-GNPLRHNYEG 869

Query: 871  HLSDMLVHYN-QTSDILYYEILDIPLPELQGLKTLKVAFYHAT-KDEVVSHTIRLPKQST 928
             L D+L  +  +    LYY+ L + + + +  ++ K  + ++  ++E +  T+   K   
Sbjct: 870  TLRDLLQFFKPRQPKKLYYQQLKMKITDFENRRSFKCIWLNSQFREEEI--TLYPDKHGC 927

Query: 929  VGDVLDDLKTKVELSH-PNAELRLLEVFYHKIYKVFPPNEKIETIND-QYWTLRAEEVPE 986
            V D+L++ K  VEL    + +LRLLE+  +KI  V   +E +E ++     T R EE+P 
Sbjct: 928  VRDLLEECKKAVELGEKASGKLRLLEIVSYKIIGVHQEDELLECLSPATSRTFRIEEIPL 987

Query: 987  EEKNLG-PHDRLIHVYHFTKDTSQNQMQIQNFGEPFFLVIREGETLTEIKVRIQKKLQVP 1045
            ++ ++   ++ L+ V HF K+          FG PF L I +GE   E+  RIQ  L + 
Sbjct: 988  DQVDIDKENEMLVTVAHFHKEV------FGTFGIPFLLRIHQGEHFREVMKRIQSLLDIQ 1041

Query: 1046 DDEFEKWKFAFFALGRPEYLQDSDIVSNRFQRRDVYGAWEQ---YLGLEHTDNAPKRSYA 1102
            + EFEK+KFA   +GR +Y+ + +   N        G       +LGL+H + APKRS  
Sbjct: 1042 EKEFEKFKFAIVMMGRHQYINEDEYEVNLKDFEPQPGNMSHPRPWLGLDHFNKAPKRS-- 1099

Query: 1103 VNQNRHTF-EKPVKIYN 1118
                R+T+ EK +KI+N
Sbjct: 1100 ----RYTYLEKAIKIHN 1112


>ref|NP_001003918.1| ubiquitin specific protease 7 [Mus musculus]
            gi|33334631|gb|AAQ12339.1| herpesvirus-associated
            ubiquitin-specific protease [Mus musculus]
          Length = 1103

 Score =  623 bits (1606), Expect = e-176
 Identities = 414/1153 (35%), Positives = 613/1153 (52%), Gaps = 99/1153 (8%)

Query: 11   QQEDEEMLVPHTDLPENNHQPMEVVAQPEAAPTVESQPV--------------EEPPQSR 56
            QQ+ ++       L E     ME     +  P +   PV              EE  +  
Sbjct: 5    QQQQQQQKAGEQQLSEPEDMEMEA-GDTDDPPRITQNPVINGNVTLSDGHSNAEEDMEDD 63

Query: 57   FTWR--------IDNFSRMNVKKLYSEVFVVGGYKWRVLIFPK-------GNNVDYLSMY 101
             +WR        ++ FSR++   L    FV     W++++ P+         +V +    
Sbjct: 64   TSWRSEATFQFTVERFSRLSESVLSPPCFV-RNLPWKIMVMPRFYPDRPHQKSVGFFLQC 122

Query: 102  LDVADSTNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELY 161
               +DST+    WS +AQ  L ++N   +  +  +   H F   E+DWGF++FM   E+ 
Sbjct: 123  NAESDSTS----WSCHAQAVLKIINYRDDDKSFSRRISHLFFHEENDWGFSNFMAWSEVT 178

Query: 162  DPSRGYLLNDTLVVEAEVLVRRIVDYWT-YDSKKETGYVGLKNQGATCYMNSLLQTLYHI 220
            DP +G++ +D   V  EV V+    +   +DSKK TGYVGLKNQGATCYMNSLLQTL+  
Sbjct: 179  DPEKGFIDDDK--VTFEVFVQADAPHGVAWDSKKHTGYVGLKNQGATCYMNSLLQTLFFT 236

Query: 221  PYFRKAVYHMPTTENDMPAGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQH 280
               RKAVY MPT E D  + S+PLALQ +FY+LQ+SD  V TK+LTKSFGW+T DSFMQH
Sbjct: 237  NQLRKAVYMMPT-EGDDSSKSVPLALQRVFYELQHSDKPVGTKKLTKSFGWETLDSFMQH 295

Query: 281  DVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDV 340
            DVQEL RVL + +E+KMKGT VEGTI KLF G  ++YI+C +VDY+S R+E +YD+QL +
Sbjct: 296  DVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKDVDYRSDRREDYYDIQLSI 355

Query: 341  KGCHDVYASFDKYVEVEPLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFM 400
            KG  +++ SF  YV VE L+GDNKY A ++GLQ+A+KGV F+  PPVL LQL RF YD  
Sbjct: 356  KGKKNIFESFVDYVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTLPPVLHLQLMRFMYDPQ 415

Query: 401  RDTMVKINDRYEFPLELDLDRDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFI 460
             D  +KINDR+EFP +L LD    ++L     ++  N Y LH+VLVHSG  HGGHY  ++
Sbjct: 416  TDQNIKINDRFEFPEQLPLD----EFLQKTDPKDPAN-YILHAVLVHSGDNHGGHYVVYL 470

Query: 461  RPTLSDQWYKFDDERVTKEDTKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVY 520
             P    +W KFDD+ V++   + A+E  YGG ++                  +NAYMLVY
Sbjct: 471  NPKGDGKWCKFDDDVVSRCTKEEAIEHNYGGHDD-----------DLSVRHCTNAYMLVY 519

Query: 521  IREADKDKVICNVDEKDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARNEDLKEQ 580
            IRE+   +V+  V + DI + L ERL++E+  +  K+KE+ EAHLY  +++   +     
Sbjct: 520  IRESKLSEVLQAVTDHDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQFCGH 579

Query: 581  IGKDIYFDLVDHDKVR--SFRVQKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYR 638
             G D+Y    D +KVR   F+V K  S   F + +++  G P    R W    R N T R
Sbjct: 580  QGNDMY----DEEKVRYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKR 635

Query: 639  PNRPLTPAEEAQSVGQVREVSNKVHNAELKLFLEVELGPDLR---PIAPSDKTKDDILLF 695
            P      A+  +++ ++ +  N        +FLE  + P+L       P      D++LF
Sbjct: 636  PAMLDNEADGNKTMIELSDNEN-----PWTIFLET-VDPELAASGATLPKFDKDHDVMLF 689

Query: 696  FKLYDPEKEELRYVGRLFVKSTGKPSEILTRLNEMAGYDPDEEIGLYEEIKFEPNVMCEP 755
             K+YDP+   L Y G ++   + K  ++L  + + AG+  D  + LYEE+K       + 
Sbjct: 690  LKMYDPKTRSLNYCGHIYTPISCKIRDLLPVMCDRAGFIQDTSLILYEEVKPNLTERIQD 749

Query: 756  IDKKLTFRASQLEDGDIICFQK-APAMDSEEHVRYPDVPSYLEYVHNRQVVHFRSLDKPK 814
             D  L     +L DGDII FQK  P  D+ E    P    Y   +++R  V F     P 
Sbjct: 750  YDVSLDKALDELMDGDIIVFQKDDPENDNSE---LPTAKEYFRDLYHRVDVIFCDKTIPN 806

Query: 815  EDDFCLEMSRLYTYDDVVEKVAQQLNLDDPSKIRLTPHNCYSQQPKPQPIKYRGVDHLSD 874
            +  F + +S    Y  V + VAQ+LN  DP  ++      Y   P   P+++     L D
Sbjct: 807  DPGFVVTLSNRMNYFQVAKTVAQRLN-TDPMLLQFFKSQGYRDGP-GNPLRHNYEGTLRD 864

Query: 875  MLVHYN-QTSDILYYEILDIPLPELQGLKTLKVAFYHAT-KDEVVSHTIRLPKQSTVGDV 932
            +L  +  +    LYY+ L + + + +  ++ K  + ++  ++E +  T+   K   V D+
Sbjct: 865  LLQFFKPRQPKKLYYQQLKMKITDFENRRSFKCIWLNSQFREEEI--TLYPDKHGCVRDL 922

Query: 933  LDDLKTKVEL-SHPNAELRLLEVFYHKIYKVFPPNEKIETIND-QYWTLRAEEVPEEEKN 990
            L++ K  VEL    +  LRLLE+  +KI  V   +E +E ++     T R EE+P ++ +
Sbjct: 923  LEECKKAVELGDKASGRLRLLEIVSYKIIGVHQEDELLECLSPATSRTFRIEEIPLDQVD 982

Query: 991  LG-PHDRLIHVYHFTKDTSQNQMQIQNFGEPFFLVIREGETLTEIKVRIQKKLQVPDDEF 1049
            +   ++ LI V HF K+          FG PF L I +GE   E+  RIQ  L + + EF
Sbjct: 983  IDKENEMLITVAHFHKEV------FGTFGIPFLLRIHQGEHFREVMKRIQSLLDIQEKEF 1036

Query: 1050 EKWKFAFFALGRPEYLQDSDIVSNRFQRRDVYGAWEQ---YLGLEHTDNAPKRSYAVNQN 1106
            EK+KFA   +GR +Y+ + +   N        G       +LGL+H + APKRS      
Sbjct: 1037 EKFKFAIVMMGRHQYINEDEYEVNLKDFEPQPGNMSHPRPWLGLDHFNKAPKRS------ 1090

Query: 1107 RHTF-EKPVKIYN 1118
            R+T+ EK +KI+N
Sbjct: 1091 RYTYLEKAIKIHN 1103


>ref|XP_510806.1| PREDICTED: similar to ubiquitin-specific protease 7 isoform [Pan
            troglodytes]
          Length = 1185

 Score =  623 bits (1606), Expect = e-176
 Identities = 400/1088 (36%), Positives = 599/1088 (54%), Gaps = 76/1088 (6%)

Query: 54   QSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPK-------GNNVDYLSMYLDVAD 106
            ++ F + ++ FSR++   L    FV     W++++ P+         +V +       +D
Sbjct: 151  EATFQFTVERFSRLSESVLSPPCFV-RNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESD 209

Query: 107  STNLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRG 166
            ST+    WS +AQ  L ++N   ++ +  +   H F  +E+DWGF++FM   E+ DP +G
Sbjct: 210  STS----WSCHAQAVLKIINYRDDEKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKG 265

Query: 167  YLLNDTLVVEAEVLVRRIVDYWT-YDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRK 225
            ++ +D   V  EV V+    +   +DSKK TGYVGLKNQGATCYMNSLLQTL+     RK
Sbjct: 266  FIDDDK--VTFEVFVQADAPHGVAWDSKKHTGYVGLKNQGATCYMNSLLQTLFFTNQLRK 323

Query: 226  AVYHMPTTENDMPAGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQEL 285
            AVY MPT E D  + S+PLALQ +FY+LQ+SD  V TK+LTKSFGW+T DSFMQHDVQEL
Sbjct: 324  AVYMMPT-EGDDSSKSVPLALQRVFYELQHSDKPVGTKKLTKSFGWETLDSFMQHDVQEL 382

Query: 286  NRVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHD 345
             RVL + +E+KMKGT VEGTI KLF G  ++YI+C  VDY+S R+E +YD+QL +KG  +
Sbjct: 383  CRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKEVDYRSDRREDYYDIQLSIKGKKN 442

Query: 346  VYASFDKYVEVEPLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMV 405
            ++ SF  YV VE L+GDNKY A ++GLQ+A+KGV F+  PPVL LQL RF YD   D  +
Sbjct: 443  IFESFVDYVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNI 502

Query: 406  KINDRYEFPLELDLDRDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLS 465
            KINDR+EFP +L LD    ++L     ++  N Y LH+VLVHSG  HGGHY  ++ P   
Sbjct: 503  KINDRFEFPEQLPLD----EFLQKTDPKDPAN-YILHAVLVHSGDNHGGHYVVYLNPKGD 557

Query: 466  DQWYKFDDERVTKEDTKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIREAD 525
             +W KFDD+ V++   + A+E  YGG ++                  +NAYMLVYIRE+ 
Sbjct: 558  GKWCKFDDDVVSRCTKEEAIEHNYGGHDD-----------DLSVRHCTNAYMLVYIRESK 606

Query: 526  KDKVICNVDEKDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARNEDLKEQIGKDI 585
              +V+  V + DI + L ERL++E+  +  K+KE+ EAHLY  +++   +      G D+
Sbjct: 607  LSEVLQAVTDHDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQFCGHQGNDM 666

Query: 586  YFDLVDHDKVR--SFRVQKQMSFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPL 643
            Y    D +KV+   F+V K  S   F + +++  G P    R W    R N T RP    
Sbjct: 667  Y----DEEKVKYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKRPAMLD 722

Query: 644  TPAEEAQSVGQVREVSNKVHNAELKLFLEVELGPDLR---PIAPSDKTKDDILLFFKLYD 700
              A+  +++ ++ +  N        +FLE  + P+L       P      D++LF K+YD
Sbjct: 723  NEADGNKTMIELSDNEN-----PWTIFLET-VDPELAASGATLPKFDKDHDVMLFLKMYD 776

Query: 701  PEKEELRYVGRLFVKSTGKPSEILTRLNEMAGYDPDEEIGLYEEIKFEPNVMCEPIDKKL 760
            P+   L Y G ++   + K  ++L  + + AG+  D  + LYEE+K       +  D  L
Sbjct: 777  PKTRSLNYCGHIYTPISCKIRDLLPVMCDRAGFIQDTSLILYEEVKPNLTERIQDYDVSL 836

Query: 761  TFRASQLEDGDIICFQK-APAMDSEEHVRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFC 819
                 +L DGDII FQK  P  D+ E    P    Y   +++R  V F     P +  F 
Sbjct: 837  DKALDELMDGDIIVFQKDDPENDNSE---LPTAKEYFRDLYHRVDVIFCDKTIPNDPGFV 893

Query: 820  LEMSRLYTYDDVVEKVAQQLNLDDPSKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLVHY 879
            + +S    Y  V + VAQ+LN  DP  ++      Y   P   P+++     L D+L  +
Sbjct: 894  VTLSNRMNYFQVAKTVAQRLN-TDPMLLQFFKSQGYRDGP-GNPLRHNYEGTLRDLLQFF 951

Query: 880  N-QTSDILYYEILDIPLPELQGLKTLKVAFYHAT-KDEVVSHTIRLPKQSTVGDVLDDLK 937
              +    LYY+ L + + + +  ++ K  + ++  ++E +  T+   K   V D+L++ K
Sbjct: 952  KPRQPKKLYYQQLKMKITDFENRRSFKCIWLNSQFREEEI--TLYPDKHGCVRDLLEECK 1009

Query: 938  TKVELSH-PNAELRLLEVFYHKIYKVFPPNEKIETIND-QYWTLRAEEVPEEEKNLG-PH 994
              VEL    + +LRLLE+  +KI  V   +E +E ++     T R EE+P ++ ++   +
Sbjct: 1010 KAVELGEKASGKLRLLEIVSYKIIGVHQEDELLECLSPATSRTFRIEEIPLDQVDIDKEN 1069

Query: 995  DRLIHVYHFTKDTSQNQMQIQNFGEPFFLVIREGETLTEIKVRIQKKLQVPDDEFEKWKF 1054
            + L+ V HF K+          FG PF L I +GE   E+  RIQ  L + + EFEK+KF
Sbjct: 1070 EMLVTVAHFHKEV------FGTFGIPFLLRIHQGEHFREVMKRIQSLLDIQEKEFEKFKF 1123

Query: 1055 AFFALGRPEYLQDSDIVSNRFQRRDVYGAWEQ---YLGLEHTDNAPKRSYAVNQNRHTF- 1110
            A   +GR +Y+ + +   N        G       +LGL+H + APKRS      R+T+ 
Sbjct: 1124 AIVMMGRHQYINEDEYEVNLKDFEPQPGNMSHPRPWLGLDHFNKAPKRS------RYTYL 1177

Query: 1111 EKPVKIYN 1118
            EK +KI+N
Sbjct: 1178 EKAIKIHN 1185


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.318    0.137    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,026,929,376
Number of Sequences: 2540612
Number of extensions: 94294732
Number of successful extensions: 317284
Number of sequences better than 10.0: 1543
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 640
Number of HSP's that attempted gapping in prelim test: 311915
Number of HSP's gapped (non-prelim): 3437
length of query: 1118
length of database: 863,360,394
effective HSP length: 139
effective length of query: 979
effective length of database: 510,215,326
effective search space: 499500804154
effective search space used: 499500804154
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)