BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0546.10
(175 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB88130.1| putative protein [Arabidopsis thaliana] gi|26452... 156 3e-37
dbj|BAD88174.1| unknown protein [Oryza sativa (japonica cultivar... 150 1e-35
ref|XP_629930.1| hypothetical protein DDB0184065 [Dictyostelium ... 50 3e-05
emb|CAF92698.1| unnamed protein product [Tetraodon nigroviridis] 49 6e-05
gb|AAH77889.1| Apbb1ip-prov protein [Xenopus laevis] 47 2e-04
ref|ZP_00055306.2| COG0484: DnaJ-class molecular chaperone with ... 46 4e-04
ref|XP_470894.1| hypothetical protein [Oryza sativa (japonica cu... 46 5e-04
ref|XP_531383.1| PREDICTED: hypothetical protein XP_531383 [Pan ... 44 0.001
dbj|BAC42165.1| unknown protein [Arabidopsis thaliana] gi|288274... 44 0.001
gb|AAL14642.1| retinoid X receptor beta [Mustela vison] 44 0.001
dbj|BAA83718.1| RNA binding protein [Homo sapiens] gi|19923466|r... 44 0.002
ref|XP_220207.3| PREDICTED: similar to serine/arginine repetitiv... 44 0.002
dbj|BAB01392.1| unnamed protein product [Arabidopsis thaliana] g... 44 0.002
gb|AAO72634.1| p67-like superoxide-generating NADPH oxidase [Dic... 44 0.002
dbj|BAC65530.1| mKIAA0324 protein [Mus musculus] 44 0.002
gb|AAH09062.1| Unknown (protein for IMAGE:3875076) [Homo sapiens] 44 0.002
pir||T02345 hypothetical protein KIAA0324 - human (fragment) gi|... 44 0.002
dbj|BAA20782.2| KIAA0324 protein [Homo sapiens] 44 0.002
dbj|BAA83717.1| RNA binding protein [Homo sapiens] 44 0.002
ref|XP_482525.1| putative formin homology(FH)protein [Oryza sati... 44 0.003
>emb|CAB88130.1| putative protein [Arabidopsis thaliana] gi|26452306|dbj|BAC43239.1|
unknown protein [Arabidopsis thaliana]
gi|15229846|ref|NP_189988.1| thylakoid lumenal P17.1
protein [Arabidopsis thaliana] gi|11288806|pir||T48956
hypothetical protein T15B3.160 - Arabidopsis thaliana
Length = 159
Score = 156 bits (394), Expect = 3e-37
Identities = 89/167 (53%), Positives = 103/167 (61%), Gaps = 14/167 (8%)
Query: 11 PLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRHKPPK 70
PL S L SSSSSSS + L L P S H R +K
Sbjct: 5 PLISLQLLSSSSSSSSLKPTTKL-------LFFHKPELISHHH-----RNRNKLSRTSVH 52
Query: 71 PPRLFMIIDP--ILLLNGFGGAGFYLDTQTLLATVSVLAAIALSLFLGLKGDPVPCERCA 128
+II P + L + F G G ++DTQT + T+S++ AIALSLFLG KGDPVPCERC
Sbjct: 53 QHSANLIIHPSVLFLSSAFDGGGGFIDTQTFIVTISLVVAIALSLFLGFKGDPVPCERCG 112
Query: 129 GNGGMKCVFCNDGKMKQEMGLIDCKVCKGSGLILCKKCGGSGYSRRL 175
GNGG KCVFC +GKMK E G++DCKVCKGSGLI CKKCGGSGYSRRL
Sbjct: 113 GNGGTKCVFCLEGKMKVESGMVDCKVCKGSGLIFCKKCGGSGYSRRL 159
>dbj|BAD88174.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|57899649|dbj|BAD87318.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 145
Score = 150 bits (380), Expect = 1e-35
Identities = 85/164 (51%), Positives = 104/164 (62%), Gaps = 22/164 (13%)
Query: 14 SSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRHKPPKPPR 73
+S L P++++S SS S S S PQPS P S + P PPR
Sbjct: 2 ASLLCPAAAASYSSLLS---SSFPSRRRPQPSAPLASPA---------------PSSPPR 43
Query: 74 LFMIIDPILLLNGFGGAGFY--LDTQTLLATVSVLAAIALSLFLGLKGDPVPCERCAGNG 131
+ G+GG DTQTLL + +V++A++LSL LGLKGDPVPCERCAGNG
Sbjct: 44 PRSVAAAAAY--GYGGDVLMRPFDTQTLLISAAVVSAVSLSLVLGLKGDPVPCERCAGNG 101
Query: 132 GMKCVFCNDGKMKQEMGLIDCKVCKGSGLILCKKCGGSGYSRRL 175
G KCVFCNDGKMK E G+++C+VCKG+GLILCKKC GSGYSRRL
Sbjct: 102 GTKCVFCNDGKMKVENGVVECRVCKGAGLILCKKCSGSGYSRRL 145
>ref|XP_629930.1| hypothetical protein DDB0184065 [Dictyostelium discoideum]
gi|60463326|gb|EAL61517.1| hypothetical protein
DDB0184065 [Dictyostelium discoideum]
Length = 989
Score = 50.1 bits (118), Expect = 3e-05
Identities = 33/60 (55%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 13 SSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSP-PPPSKSHFPSLPRFPSKCRHKPPKP 71
S SS PPSSSSSSSSS+S S SS S P PSP P PS S PS PS P P
Sbjct: 44 SLSSTPPSSSSSSSSSSSSSSSSSSSPSPPSPSPSPSPSPSPSPSPSPSPSPSPSPSPSP 103
Score = 41.2 bits (95), Expect = 0.012
Identities = 33/61 (54%), Positives = 36/61 (58%), Gaps = 4/61 (6%)
Query: 5 SYSTLH--PLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSP-PPPSKSHFPSLPRFP 61
SY++L P SSSS SSSSSSSSS+S P S S P PSP P PS S PS P
Sbjct: 41 SYASLSSTPPSSSSSSSSSSSSSSSSSSSPSPPSPSPS-PSPSPSPSPSPSPSPSPSPSP 99
Query: 62 S 62
S
Sbjct: 100 S 100
Score = 38.9 bits (89), Expect = 0.062
Identities = 34/62 (54%), Positives = 36/62 (57%), Gaps = 3/62 (4%)
Query: 2 ATLSYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSP-PPPSKSHFPSLPRF 60
A+LS ST SSSS SSSSSSSSS+ SP S S P PSP P PS S PS
Sbjct: 43 ASLS-STPPSSSSSSSSSSSSSSSSSSSPSPPSPSPSPS-PSPSPSPSPSPSPSPSPSPS 100
Query: 61 PS 62
PS
Sbjct: 101 PS 102
Score = 32.7 bits (73), Expect = 4.4
Identities = 24/53 (45%), Positives = 26/53 (48%), Gaps = 3/53 (5%)
Query: 5 SYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHS---LPQPSPPPPSKSHF 54
S S+ SSS PPS S S S S S SP S S P PSP P + S F
Sbjct: 59 SSSSSSSSSSSPSPPSPSPSPSPSPSPSPSPSPSPSPSPSPSPSPSPTTTSTF 111
>emb|CAF92698.1| unnamed protein product [Tetraodon nigroviridis]
Length = 468
Score = 48.9 bits (115), Expect = 6e-05
Identities = 32/68 (47%), Positives = 34/68 (49%), Gaps = 2/68 (2%)
Query: 5 SYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKC 64
S S+ P S S PPSS SSSS S+S SP S S P SP PPS PS P P
Sbjct: 201 SPSSSSPPSPPSSPPSSPSSSSPSSSPPSSPSSPSSPPPSSPSPPSSPPSPSSP--PPSS 258
Query: 65 RHKPPKPP 72
P PP
Sbjct: 259 PSSPSSPP 266
Score = 42.4 bits (98), Expect = 0.006
Identities = 33/71 (46%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query: 10 HPLSSSSLP--------PSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFP 61
HP SSSS P PSS SS SS+S SP SS S P SPPP S PS P P
Sbjct: 194 HPSSSSSSPSSSSPPSPPSSPPSSPSSSSPSSSPPSSPSSPS-SPPPSS----PSPPSSP 248
Query: 62 SKCRHKPPKPP 72
PP P
Sbjct: 249 PSPSSPPPSSP 259
Score = 40.4 bits (93), Expect = 0.021
Identities = 28/69 (40%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
Query: 11 PLSSSSLP-------PSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSK 63
PLS+ +L PSSSSSS SS+S P S S P S P S PS P P
Sbjct: 180 PLSNGALERHGEPAHPSSSSSSPSSSSPPSPPSSPPSSPSSSSPSSSPPSSPSSPSSPPP 239
Query: 64 CRHKPPKPP 72
PP P
Sbjct: 240 SSPSPPSSP 248
Score = 37.4 bits (85), Expect = 0.18
Identities = 28/58 (48%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
Query: 14 SSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRHKPPKP 71
SSS P S SS SS S SP S P PS PPPS PS P PS PP P
Sbjct: 224 SSSPPSSPSSPSSPPPS---SPSPPSSPPSPSSPPPSSPSSPSSPP-PS----SPPSP 273
Score = 35.8 bits (81), Expect = 0.52
Identities = 23/47 (48%), Positives = 25/47 (52%), Gaps = 4/47 (8%)
Query: 11 PLSSSSLPPSS----SSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSH 53
P S SS PPSS SS S S+ SP S S P SPP PS +H
Sbjct: 231 PSSPSSPPPSSPSPPSSPPSPSSPPPSSPSSPSSPPPSSPPSPSSTH 277
>gb|AAH77889.1| Apbb1ip-prov protein [Xenopus laevis]
Length = 639
Score = 47.4 bits (111), Expect = 2e-04
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 18 PPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRHKPPKPPRLFMI 77
PPS S++ + ++ + P P PPPP + ++P P K +H PPKPP+ I
Sbjct: 547 PPSFMSNAENPPPPPVTQLQMSNAPAPPPPPPPPAPAANVPPLPVK-KH-PPKPPKRQSI 604
Query: 78 IDPILLLNGFGGAG 91
+ P+ N GGAG
Sbjct: 605 VGPMPGTNAHGGAG 618
>ref|ZP_00055306.2| COG0484: DnaJ-class molecular chaperone with C-terminal Zn finger
domain [Magnetospirillum magnetotacticum MS-1]
Length = 382
Score = 46.2 bits (108), Expect = 4e-04
Identities = 25/66 (37%), Positives = 35/66 (52%), Gaps = 14/66 (21%)
Query: 123 PCERCAGNGG------MKCVFCND-GKMKQEMGLID----CKVCKGSGLIL---CKKCGG 168
PCE C G GG + C C+ GK++Q+ G C C+G G I+ C+ CGG
Sbjct: 148 PCEDCKGTGGKDGAAPVTCSACHGHGKIRQQQGFFTIERTCPTCQGMGKIIKDPCRSCGG 207
Query: 169 SGYSRR 174
SG +R+
Sbjct: 208 SGRTRK 213
>ref|XP_470894.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|29788817|gb|AAP03363.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 464
Score = 45.8 bits (107), Expect = 5e-04
Identities = 28/76 (36%), Positives = 40/76 (51%), Gaps = 3/76 (3%)
Query: 1 MATLSYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRF 60
+AT S + P SS + PP + + + T SP SS + P P+ P + H P+LP
Sbjct: 199 VATTSLGSATPPSSPASPPPRPNFAGTPTPAPASPSSSSTSP-PAAPSAAPVHQPALPSP 257
Query: 61 PSKCRHKPPKPPRLFM 76
PS H+P PPRL +
Sbjct: 258 PSASPHRP--PPRLLL 271
>ref|XP_531383.1| PREDICTED: hypothetical protein XP_531383 [Pan troglodytes]
Length = 1056
Score = 44.3 bits (103), Expect = 0.001
Identities = 30/64 (46%), Positives = 31/64 (47%), Gaps = 1/64 (1%)
Query: 11 PLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRHKPPK 70
P S S LP S S SS + SP SS S P P PP PS S PS P PS PP
Sbjct: 851 PPSPSPLPSSPPSPSSPPSPSPPSPSSSPSPPSP-PPSPSPSPSPSSPPSPSPPPSSPPP 909
Query: 71 PPRL 74
P L
Sbjct: 910 PSPL 913
Score = 41.6 bits (96), Expect = 0.010
Identities = 31/62 (50%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 11 PLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRHKPPK 70
PLS S PP SS SSS SL P S S PS PPPS PS P PS PP
Sbjct: 912 PLSPS--PPPSSPLPSSSPSLSPPPPPSPS--SPSSPPPSSPPSPSPPP-PSSPSPSPPS 966
Query: 71 PP 72
PP
Sbjct: 967 PP 968
Score = 37.7 bits (86), Expect = 0.14
Identities = 26/57 (45%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 18 PPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLP---RFPSKCRHKPPKP 71
PPSS S S S SP S S P PSPP PS S P P PS PP P
Sbjct: 847 PPSSPPSPSPLPS---SPPSPSSPPSPSPPSPSSSPSPPSPPPSPSPSPSPSSPPSP 900
Score = 37.7 bits (86), Expect = 0.14
Identities = 28/57 (49%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 14 SSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPP-PPSKSHFPSLPRFPSKCRHKPP 69
S S PPS S S SS+ SP S S P PSP PPS S PS P PS PP
Sbjct: 863 SPSSPPSPSPPSPSSSPSPPSPPPSPS-PSPSPSSPPSPSPPPSSPPPPSPLSPSPP 918
Score = 37.0 bits (84), Expect = 0.23
Identities = 29/63 (46%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 13 SSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPP---SKSHFPSLPRFPSKCRHKPP 69
SSS PPS S S S S P S S P SPPPP S S PS P S PP
Sbjct: 876 SSSPSPPSPPPSPSPSPSPSSPP--SPSPPPSSPPPPSPLSPSPPPSSPLPSSSPSLSPP 933
Query: 70 KPP 72
PP
Sbjct: 934 PPP 936
Score = 34.3 bits (77), Expect = 1.5
Identities = 27/59 (45%), Positives = 28/59 (46%), Gaps = 8/59 (13%)
Query: 11 PLSSSSL-PPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRHKP 68
P SS SL PP S SS S+ SP P PSPPPPS S PS P P P
Sbjct: 924 PSSSPSLSPPPPPSPSSPSSPPPSSP------PSPSPPPPS-SPSPSPPSPPPSVAASP 975
Score = 34.3 bits (77), Expect = 1.5
Identities = 27/66 (40%), Positives = 28/66 (41%), Gaps = 6/66 (9%)
Query: 13 SSSSLPPSSSSSSSSSTSLHLSPCSSHSLP----QPSPPP--PSKSHFPSLPRFPSKCRH 66
S S PPS S S S S+ SP S P PSPPP P S PSL P
Sbjct: 880 SPPSPPPSPSPSPSPSSPPSPSPPPSSPPPPSPLSPSPPPSSPLPSSSPSLSPPPPPSPS 939
Query: 67 KPPKPP 72
P PP
Sbjct: 940 SPSSPP 945
Score = 34.3 bits (77), Expect = 1.5
Identities = 27/68 (39%), Positives = 28/68 (40%), Gaps = 7/68 (10%)
Query: 11 PLSSSSLPPSSSSSSSSS---TSLHLSPCSSHSLPQP----SPPPPSKSHFPSLPRFPSK 63
P S S PPS S SS + L SP S LP SPPPP PS P S
Sbjct: 890 PSPSPSSPPSPSPPPSSPPPPSPLSPSPPPSSPLPSSSPSLSPPPPPSPSSPSSPPPSSP 949
Query: 64 CRHKPPKP 71
PP P
Sbjct: 950 PSPSPPPP 957
>dbj|BAC42165.1| unknown protein [Arabidopsis thaliana] gi|28827400|gb|AAO50544.1|
unknown protein [Arabidopsis thaliana]
Length = 146
Score = 44.3 bits (103), Expect = 0.001
Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 13 SSSSLPPSSSSSSSSSTSLHLSPC-SSHSLPQPSPPPPSKSHFPS--LPRFPSKCRHKPP 69
SSS+ P SSSSSSSSSTS ++P + + P P+PPPPS + P P P P
Sbjct: 44 SSSTDPSSSSSSSSSSTSPFITPFPNPNPNPNPNPPPPSTPNPPPEFSPPPPDLDTTTAP 103
Query: 70 KPPRLFMIIDP 80
PP + I P
Sbjct: 104 PPPSTDIPIPP 114
>gb|AAL14642.1| retinoid X receptor beta [Mustela vison]
Length = 525
Score = 44.3 bits (103), Expect = 0.001
Identities = 47/159 (29%), Positives = 59/159 (36%), Gaps = 26/159 (16%)
Query: 11 PLSSSSLPPSSSSSSSSSTSLHLSPCSSHSL-------PQPSPPPPSKSHFPSLPRFPSK 63
P SSS P + SS L L P ++ SL P P PPPP S FP +
Sbjct: 75 PDSSSPNPLPQGAPPSSPPGLPLPPSAASSLGGSGAPPPPPMPPPPLGSPFPVISSSMGS 134
Query: 64 CRHKPPKPPRL-----FMIIDPILLLNGFGGAGFYLDTQTLLATVSVLAAIALSLFLGLK 118
PP PP I+ + L G GG+G D + + V GL
Sbjct: 135 PGLPPPAPPGFSGPVSSPQINSTVSLPG-GGSGPPEDVKPPVLGVR-----------GLH 182
Query: 119 GDPVPCERCAGNGGMKCVFCNDGKMKQEMGLIDCKVCKG 157
P P G G C C D + G+ C+ CKG
Sbjct: 183 CPPPP--GGPGAGKRLCAICGDRSSGKHYGVYSCEGCKG 219
>dbj|BAA83718.1| RNA binding protein [Homo sapiens] gi|19923466|ref|NP_057417.2|
splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 43.9 bits (102), Expect = 0.002
Identities = 30/70 (42%), Positives = 38/70 (53%), Gaps = 2/70 (2%)
Query: 5 SYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRF--PS 62
S S+ SSSS SSSSSSSSS+S S SS S P P+ P P P+ P+ P
Sbjct: 2612 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPG 2671
Query: 63 KCRHKPPKPP 72
+ R + P+ P
Sbjct: 2672 ERRSRSPRKP 2681
Score = 40.8 bits (94), Expect = 0.016
Identities = 31/68 (45%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 5 SYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKC 64
S S+ SSSS SSSSSSSSS+S S SS S S P P+K +LP+ S
Sbjct: 2607 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPAS-- 2664
Query: 65 RHKPPKPP 72
P KPP
Sbjct: 2665 ---PKKPP 2669
Score = 36.2 bits (82), Expect = 0.40
Identities = 28/81 (34%), Positives = 30/81 (36%), Gaps = 3/81 (3%)
Query: 3 TLSYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPS 62
+LS S+ P S PP S S SS S SPPP KS PS S
Sbjct: 778 SLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSS 837
Query: 63 KCRH---KPPKPPRLFMIIDP 80
H K PPR I P
Sbjct: 838 SSPHPKVKSGTPPRQGSITSP 858
Score = 35.4 bits (80), Expect = 0.68
Identities = 26/61 (42%), Positives = 30/61 (48%)
Query: 13 SSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRHKPPKPP 72
SSSS SSSSSSSSS+S S SS S S S S PS + + KP P
Sbjct: 2607 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPK 2666
Query: 73 R 73
+
Sbjct: 2667 K 2667
Score = 31.6 bits (70), Expect = 9.8
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 11 PLSSSSLPPS----SSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRH 66
P + ++L P+ SSSSSSSS+S S SS S S S S SLP P
Sbjct: 2518 PSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALK 2577
Query: 67 KPPKP 71
+ P P
Sbjct: 2578 RVPSP 2582
>ref|XP_220207.3| PREDICTED: similar to serine/arginine repetitive matrix 2 [Rattus
norvegicus]
Length = 1577
Score = 43.9 bits (102), Expect = 0.002
Identities = 30/70 (42%), Positives = 38/70 (53%), Gaps = 2/70 (2%)
Query: 5 SYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRF--PS 62
S S+ SSSS SSSSSSSSS+S S SS S P P+ P P P+ P+ P
Sbjct: 1439 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPG 1498
Query: 63 KCRHKPPKPP 72
+ R + P+ P
Sbjct: 1499 ERRSRSPRKP 1508
Score = 40.8 bits (94), Expect = 0.016
Identities = 31/68 (45%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 5 SYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKC 64
S S+ SSSS SSSSSSSSS+S S SS S S P P+K +LP+ S
Sbjct: 1434 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPAS-- 1491
Query: 65 RHKPPKPP 72
P KPP
Sbjct: 1492 ---PKKPP 1496
Score = 35.4 bits (80), Expect = 0.68
Identities = 26/61 (42%), Positives = 30/61 (48%)
Query: 13 SSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRHKPPKPP 72
SSSS SSSSSSSSS+S S SS S S S S PS + + KP P
Sbjct: 1434 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPK 1493
Query: 73 R 73
+
Sbjct: 1494 K 1494
Score = 32.3 bits (72), Expect = 5.8
Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 13 SSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKC-RHKPPKP 71
SSSS SSSSSSSSS+S S S P+ P + PS P + R P+
Sbjct: 1365 SSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPAQPEVALKRVPSPTPVPKEAVREGRPQE 1424
Query: 72 P 72
P
Sbjct: 1425 P 1425
Score = 32.0 bits (71), Expect = 7.5
Identities = 27/73 (36%), Positives = 34/73 (45%), Gaps = 10/73 (13%)
Query: 5 SYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQ---------PSPPP-PSKSHF 54
S S+ SSSS SSSSSSSSS+ S SLP PSP P P ++
Sbjct: 1359 SSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPAQPEVALKRVPSPTPVPKEAVR 1418
Query: 55 PSLPRFPSKCRHK 67
P+ P+ + K
Sbjct: 1419 EGRPQEPTPAKRK 1431
Score = 31.6 bits (70), Expect = 9.8
Identities = 22/51 (43%), Positives = 24/51 (46%)
Query: 21 SSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRHKPPKP 71
SSSSSSSS+S S SS S S S S SLP P + P P
Sbjct: 1359 SSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPAQPEVALKRVPSP 1409
>dbj|BAB01392.1| unnamed protein product [Arabidopsis thaliana]
gi|18403249|ref|NP_566698.1| proline-rich family protein
[Arabidopsis thaliana]
Length = 178
Score = 43.9 bits (102), Expect = 0.002
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 13 SSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRHKPPKPP 72
SSS+ P SSSSSSSSSTS ++P + + P P+P PP P P S P PP
Sbjct: 44 SSSTDPSSSSSSSSSSTSPFITPFPNPN-PNPNPNPPVLGSSPPSPTDSSSSTSISPNPP 102
Score = 34.3 bits (77), Expect = 1.5
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 10 HPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPS--LPRFPSKCRHK 67
+P S PPS + SSSS++ +SP + P+PPPPS + P P P
Sbjct: 77 NPPVLGSSPPSPTDSSSSTS---ISPNPPAPIVNPNPPPPSTPNPPPEFSPPPPDLDTTT 133
Query: 68 PPKPPRLFMIIDP 80
P PP + I P
Sbjct: 134 APPPPSTDIPIPP 146
>gb|AAO72634.1| p67-like superoxide-generating NADPH oxidase [Dictyostelium
discoideum] gi|29028302|gb|AAO62420.1| p67-like
superoxide-generating NADPH oxidase [Dictyostelium
discoideum] gi|66805627|ref|XP_636535.1| hypothetical
protein DDB0191152 [Dictyostelium discoideum]
gi|60464893|gb|EAL63008.1| hypothetical protein
DDB0191152 [Dictyostelium discoideum]
Length = 604
Score = 43.9 bits (102), Expect = 0.002
Identities = 29/60 (48%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Query: 8 TLHPLSSSSLPPSSSSSS---SSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKC 64
T P SS PPSSSSSS SSS+S +SP ++ +LP PP PSK LP P C
Sbjct: 248 TPKPSFGSSPPPSSSSSSSSSSSSSSSSISPLTNKTLPPKPPPLPSK----KLPSRPISC 303
Score = 36.2 bits (82), Expect = 0.40
Identities = 29/67 (43%), Positives = 31/67 (45%), Gaps = 7/67 (10%)
Query: 14 SSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKC------RHK 67
SSS P SSS S SSS+S L P S SPPP S S S S +
Sbjct: 226 SSSSPSSSSPSLSSSSSPKLPPTPKPSFGS-SPPPSSSSSSSSSSSSSSSSISPLTNKTL 284
Query: 68 PPKPPRL 74
PPKPP L
Sbjct: 285 PPKPPPL 291
Score = 35.8 bits (81), Expect = 0.52
Identities = 25/63 (39%), Positives = 28/63 (43%), Gaps = 1/63 (1%)
Query: 11 PLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRHKPPK 70
P S SS SSS ST + SP S+ L PS PP S S S P S K P
Sbjct: 189 PQKQRSATTSSIQSSSPSTPMSSSP-PSYILKGPSSPPSSSSPSSSSPSLSSSSSPKLPP 247
Query: 71 PPR 73
P+
Sbjct: 248 TPK 250
>dbj|BAC65530.1| mKIAA0324 protein [Mus musculus]
Length = 1754
Score = 43.9 bits (102), Expect = 0.002
Identities = 30/70 (42%), Positives = 38/70 (53%), Gaps = 2/70 (2%)
Query: 5 SYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRF--PS 62
S S+ SSSS SSSSSSSSS+S S SS S P P+ P P P+ P+ P
Sbjct: 1617 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPG 1676
Query: 63 KCRHKPPKPP 72
+ R + P+ P
Sbjct: 1677 ERRSRSPRKP 1686
Score = 40.8 bits (94), Expect = 0.016
Identities = 31/68 (45%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 5 SYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKC 64
S S+ SSSS SSSSSSSSS+S S SS S S P P+K +LP+ S
Sbjct: 1612 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPAS-- 1669
Query: 65 RHKPPKPP 72
P KPP
Sbjct: 1670 ---PKKPP 1674
Score = 35.4 bits (80), Expect = 0.68
Identities = 26/61 (42%), Positives = 30/61 (48%)
Query: 13 SSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRHKPPKPP 72
SSSS SSSSSSSSS+S S SS S S S S PS + + KP P
Sbjct: 1612 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPK 1671
Query: 73 R 73
+
Sbjct: 1672 K 1672
Score = 32.3 bits (72), Expect = 5.8
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 11 PLSSSSLPPS----SSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRH 66
P + ++L P+ SSSSSSSS+S S SS S S S S SLP P
Sbjct: 1523 PSTLAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPAQPEVALK 1582
Query: 67 KPPKP 71
+ P P
Sbjct: 1583 RVPSP 1587
Score = 32.3 bits (72), Expect = 5.8
Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 13 SSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKC-RHKPPKP 71
SSSS SSSSSSSSS+S S S P+ P + PS P + R P+
Sbjct: 1543 SSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPAQPEVALKRVPSPTPVPKEAIREGRPQE 1602
Query: 72 P 72
P
Sbjct: 1603 P 1603
Score = 32.0 bits (71), Expect = 7.5
Identities = 27/73 (36%), Positives = 34/73 (45%), Gaps = 10/73 (13%)
Query: 5 SYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQ---------PSPPP-PSKSHF 54
S S+ SSSS SSSSSSSSS+ S SLP PSP P P ++
Sbjct: 1537 SSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPAQPEVALKRVPSPTPVPKEAIR 1596
Query: 55 PSLPRFPSKCRHK 67
P+ P+ + K
Sbjct: 1597 EGRPQEPTPAKRK 1609
>gb|AAH09062.1| Unknown (protein for IMAGE:3875076) [Homo sapiens]
Length = 198
Score = 43.9 bits (102), Expect = 0.002
Identities = 30/70 (42%), Positives = 38/70 (53%), Gaps = 2/70 (2%)
Query: 5 SYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRF--PS 62
S S+ SSSS SSSSSSSSS+S S SS S P P+ P P P+ P+ P
Sbjct: 58 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPG 117
Query: 63 KCRHKPPKPP 72
+ R + P+ P
Sbjct: 118 ERRSRSPRKP 127
Score = 40.8 bits (94), Expect = 0.016
Identities = 31/68 (45%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 5 SYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKC 64
S S+ SSSS SSSSSSSSS+S S SS S S P P+K +LP+ S
Sbjct: 53 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPAS-- 110
Query: 65 RHKPPKPP 72
P KPP
Sbjct: 111 ---PKKPP 115
Score = 35.4 bits (80), Expect = 0.68
Identities = 26/61 (42%), Positives = 30/61 (48%)
Query: 13 SSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRHKPPKPP 72
SSSS SSSSSSSSS+S S SS S S S S PS + + KP P
Sbjct: 53 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPK 112
Query: 73 R 73
+
Sbjct: 113 K 113
>pir||T02345 hypothetical protein KIAA0324 - human (fragment)
gi|2996650|gb|AAC08453.1| KIAA0324 [Homo sapiens]
Length = 1791
Score = 43.9 bits (102), Expect = 0.002
Identities = 31/76 (40%), Positives = 38/76 (49%), Gaps = 7/76 (9%)
Query: 5 SYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKC 64
S S+ SSSS SSSSSSSSS+S S SS S P P+ P P P+ P+
Sbjct: 1644 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPK----- 1698
Query: 65 RHKPPKPPRLFMIIDP 80
KPP R + + P
Sbjct: 1699 --KPPPGERSLLPVSP 1712
Score = 31.6 bits (70), Expect = 9.8
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 11 PLSSSSLPPS----SSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRH 66
P + ++L P+ SSSSSSSS+S S SS S S S S SLP P
Sbjct: 1550 PSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALK 1609
Query: 67 KPPKP 71
+ P P
Sbjct: 1610 RVPSP 1614
>dbj|BAA20782.2| KIAA0324 protein [Homo sapiens]
Length = 1783
Score = 43.9 bits (102), Expect = 0.002
Identities = 30/70 (42%), Positives = 38/70 (53%), Gaps = 2/70 (2%)
Query: 5 SYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRF--PS 62
S S+ SSSS SSSSSSSSS+S S SS S P P+ P P P+ P+ P
Sbjct: 1643 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPG 1702
Query: 63 KCRHKPPKPP 72
+ R + P+ P
Sbjct: 1703 ERRSRSPRKP 1712
Score = 40.8 bits (94), Expect = 0.016
Identities = 31/68 (45%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 5 SYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKC 64
S S+ SSSS SSSSSSSSS+S S SS S S P P+K +LP+ S
Sbjct: 1638 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPAS-- 1695
Query: 65 RHKPPKPP 72
P KPP
Sbjct: 1696 ---PKKPP 1700
Score = 35.4 bits (80), Expect = 0.68
Identities = 26/61 (42%), Positives = 30/61 (48%)
Query: 13 SSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRHKPPKPP 72
SSSS SSSSSSSSS+S S SS S S S S PS + + KP P
Sbjct: 1638 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPK 1697
Query: 73 R 73
+
Sbjct: 1698 K 1698
Score = 31.6 bits (70), Expect = 9.8
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 11 PLSSSSLPPS----SSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRH 66
P + ++L P+ SSSSSSSS+S S SS S S S S SLP P
Sbjct: 1549 PSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALK 1608
Query: 67 KPPKP 71
+ P P
Sbjct: 1609 RVPSP 1613
>dbj|BAA83717.1| RNA binding protein [Homo sapiens]
Length = 1275
Score = 43.9 bits (102), Expect = 0.002
Identities = 30/70 (42%), Positives = 38/70 (53%), Gaps = 2/70 (2%)
Query: 5 SYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRF--PS 62
S S+ SSSS SSSSSSSSS+S S SS S P P+ P P P+ P+ P
Sbjct: 1135 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPG 1194
Query: 63 KCRHKPPKPP 72
+ R + P+ P
Sbjct: 1195 ERRSRSPRKP 1204
Score = 40.8 bits (94), Expect = 0.016
Identities = 31/68 (45%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 5 SYSTLHPLSSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKC 64
S S+ SSSS SSSSSSSSS+S S SS S S P P+K +LP+ S
Sbjct: 1130 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPAS-- 1187
Query: 65 RHKPPKPP 72
P KPP
Sbjct: 1188 ---PKKPP 1192
Score = 35.4 bits (80), Expect = 0.68
Identities = 26/61 (42%), Positives = 30/61 (48%)
Query: 13 SSSSLPPSSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRHKPPKPP 72
SSSS SSSSSSSSS+S S SS S S S S PS + + KP P
Sbjct: 1130 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPK 1189
Query: 73 R 73
+
Sbjct: 1190 K 1190
Score = 31.6 bits (70), Expect = 9.8
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 11 PLSSSSLPPS----SSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRH 66
P + ++L P+ SSSSSSSS+S S SS S S S S SLP P
Sbjct: 1041 PSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALK 1100
Query: 67 KPPKP 71
+ P P
Sbjct: 1101 RVPSP 1105
>ref|XP_482525.1| putative formin homology(FH)protein [Oryza sativa (japonica
cultivar-group)] gi|38175481|dbj|BAD01178.1| putative
formin homology(FH)protein [Oryza sativa (japonica
cultivar-group)] gi|37805923|dbj|BAC99340.1| putative
formin homology(FH)protein [Oryza sativa (japonica
cultivar-group)]
Length = 882
Score = 43.5 bits (101), Expect = 0.003
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 20 SSSSSSSSSTSLHLSPCSSHSLPQPSPPPPSKSHFPSLPRFPSKCRHKPPKPPRL 74
+S SSS S + SS +P+P+PPPP + + P P +C +PP PP L
Sbjct: 404 NSKVESSSKESSRIETSSSMGIPKPAPPPPPQKNPP--PNLKGQCYGQPPPPPPL 456
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.136 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 356,114,388
Number of Sequences: 2540612
Number of extensions: 17484591
Number of successful extensions: 255882
Number of sequences better than 10.0: 3364
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 2347
Number of HSP's that attempted gapping in prelim test: 217610
Number of HSP's gapped (non-prelim): 20225
length of query: 175
length of database: 863,360,394
effective HSP length: 119
effective length of query: 56
effective length of database: 561,027,566
effective search space: 31417543696
effective search space used: 31417543696
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 70 (31.6 bits)
Lotus: description of TM0546.10