BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0487.13
(394 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM61661.1| unknown [Arabidopsis thaliana] 150 7e-35
ref|NP_567152.1| F-box family protein [Arabidopsis thaliana] 150 7e-35
emb|CAB80774.1| hypothetical protein [Arabidopsis thaliana] gi|3... 144 6e-33
dbj|BAB11270.1| unnamed protein product [Arabidopsis thaliana] g... 137 7e-31
gb|AAN13055.1| unknown protein [Arabidopsis thaliana] gi|2232894... 135 2e-30
dbj|BAB11673.1| unnamed protein product [Arabidopsis thaliana] g... 126 1e-27
ref|NP_173137.1| F-box family protein [Arabidopsis thaliana] gi|... 126 1e-27
dbj|BAB11272.1| unnamed protein product [Arabidopsis thaliana] g... 121 4e-26
gb|AAM91640.1| unknown protein [Arabidopsis thaliana] gi|1841414... 118 3e-25
gb|AAS99714.1| At2g04230 [Arabidopsis thaliana] gi|42568929|ref|... 117 6e-25
gb|AAD27915.1| hypothetical protein [Arabidopsis thaliana] gi|25... 115 2e-24
gb|AAO37194.1| hypothetical protein [Arabidopsis thaliana] 114 4e-24
gb|AAC32239.1| hypothetical protein [Arabidopsis thaliana] gi|74... 114 7e-24
emb|CAB10188.1| hypothetical protein [Arabidopsis thaliana] gi|7... 112 2e-23
gb|AAL09802.1| AT5g56420/MCD7_18 [Arabidopsis thaliana] 111 4e-23
gb|AAM91134.1| unknown protein [Arabidopsis thaliana] gi|1459614... 110 7e-23
dbj|BAB10659.1| unnamed protein product [Arabidopsis thaliana] g... 108 3e-22
ref|NP_199307.2| F-box family protein [Arabidopsis thaliana] 108 3e-22
gb|AAO37193.1| hypothetical protein [Arabidopsis thaliana] 106 1e-21
ref|NP_973538.1| F-box family protein [Arabidopsis thaliana] 106 1e-21
>gb|AAM61661.1| unknown [Arabidopsis thaliana]
Length = 441
Score = 150 bits (379), Expect = 7e-35
Identities = 132/446 (29%), Positives = 198/446 (43%), Gaps = 76/446 (17%)
Query: 7 EDRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGGDEVYAR 66
+DR S LPD +L ILS L TK V TS+ SK+W PLW+ VP L+FD + Y E Y
Sbjct: 3 KDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFDSED-YDDKEQYT- 60
Query: 67 FVEAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRV-EHIDISLHFEDD 125
F E V K L+ ++ FRL DP +I +WV + R + E + ++
Sbjct: 61 FSEIVCKSFLSHK-APVLESFRLEFESEKVDPVDIGLWVGIAFSRHLRELVLVAADTGTG 119
Query: 126 EFLELPHIVVDTPSMFSCTTLVVLKLEGLELKANFSSVDLPFLKVLHLQDLLLQDEGCLA 185
+ P S+ +C TL L+L L L S V + L+ LHL+ + +DE +
Sbjct: 120 TAFKFP------SSLCTCNTLETLRLVLLILVDISSPVVMKSLRTLHLELVSYKDESSIR 173
Query: 186 EILSGCLALEDLKARDVFFDGNKADAEFITL---PKLVRADISESGGSQHFMMKVVN--N 240
+LSGC LE+L + G +D E T+ P L R I++ Q F V+N +
Sbjct: 174 NLLSGCPILEEL----LVIRGEDSDIEVFTIDEVPSLKRLTINDDHDGQEFWGYVINAPS 229
Query: 241 VSFLRIHEI-------------------------------------------DYNLIYMG 257
+ +L I ++ + + Y
Sbjct: 230 LKYLLIEDLRCPGFCLNAPELMEANIFDGTSITNDNFLGYLTSVKRLLLNLSPWKITYPT 289
Query: 258 EDMFHNLTHLELVYTTFNRDWFEVLE-FLKYCPKLEVLVIKQPQFYNVYLNKLGAKDWQY 316
+F+ L LE+ T DW+++L L++ PKL+VL + + N L W
Sbjct: 290 GSIFYQLVSLEMY--TREIDWWDLLTLMLEHSPKLQVLKLTD-NCVKFHKNGLPGGKWNE 346
Query: 317 PSSVPECILLHLKECCLNHYR-GTKGELQFAKYIMEHGRLLNKMTICSSTAEKQGEKLEN 375
P VPEC+L HL+ + G + E + A YI+++ R LNK T ST E+L+
Sbjct: 347 PKYVPECLLSHLETFVWRRFDWGREEEKEIATYILKNARRLNKATF--STNPVNSEELDK 404
Query: 376 LK-------KLFSCTRCSATCKFSFK 394
LK +L R S +C+F FK
Sbjct: 405 LKERRKVHNELDGVVRASNSCQFVFK 430
>ref|NP_567152.1| F-box family protein [Arabidopsis thaliana]
Length = 453
Score = 150 bits (379), Expect = 7e-35
Identities = 132/446 (29%), Positives = 198/446 (43%), Gaps = 76/446 (17%)
Query: 7 EDRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGGDEVYAR 66
+DR S LPD +L ILS L TK V TS+ SK+W PLW+ VP L+FD + Y E Y
Sbjct: 15 KDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFDSED-YDDKEQYT- 72
Query: 67 FVEAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRV-EHIDISLHFEDD 125
F E V K L+ ++ FRL DP +I +WV + R + E + ++
Sbjct: 73 FSEIVCKSFLSHK-APVLESFRLEFESEKVDPVDIGLWVGIAFSRHLRELVLVAADTGTG 131
Query: 126 EFLELPHIVVDTPSMFSCTTLVVLKLEGLELKANFSSVDLPFLKVLHLQDLLLQDEGCLA 185
+ P S+ +C TL L+L L L S V + L+ LHL+ + +DE +
Sbjct: 132 TAFKFP------SSLCTCNTLETLRLVLLILVDISSPVVMKSLRTLHLELVSYKDESSIR 185
Query: 186 EILSGCLALEDLKARDVFFDGNKADAEFITL---PKLVRADISESGGSQHFMMKVVN--N 240
+LSGC LE+L + G +D E T+ P L R I++ Q F V+N +
Sbjct: 186 NLLSGCPILEEL----LVIRGEDSDIEVFTIDEVPSLKRLTINDDHDGQEFWGYVINAPS 241
Query: 241 VSFLRIHEI-------------------------------------------DYNLIYMG 257
+ +L I ++ + + Y
Sbjct: 242 LKYLLIEDLRCPGFCLNAPELMEANIFDGTSITNDNFLGYLTSVKRLLLNLSPWKITYPT 301
Query: 258 EDMFHNLTHLELVYTTFNRDWFEVLE-FLKYCPKLEVLVIKQPQFYNVYLNKLGAKDWQY 316
+F+ L LE+ T DW+++L L++ PKL+VL + + N L W
Sbjct: 302 GSIFYQLVSLEMY--TREIDWWDLLTLMLEHSPKLQVLKLTD-NCVKFHKNGLPGGKWNE 358
Query: 317 PSSVPECILLHLKECCLNHYR-GTKGELQFAKYIMEHGRLLNKMTICSSTAEKQGEKLEN 375
P VPEC+L HL+ + G + E + A YI+++ R LNK T ST E+L+
Sbjct: 359 PKYVPECLLSHLETFVWRRFDWGREEEKEIATYILKNARRLNKATF--STNPVNSEELDK 416
Query: 376 LK-------KLFSCTRCSATCKFSFK 394
LK +L R S +C+F FK
Sbjct: 417 LKERRKVHNELDGVVRASNSCQFVFK 442
>emb|CAB80774.1| hypothetical protein [Arabidopsis thaliana]
gi|3193321|gb|AAC19303.1| F6N15.5 gene product
[Arabidopsis thaliana] gi|7486547|pir||T01344
hypothetical protein F6N15.5 - Arabidopsis thaliana
Length = 509
Score = 144 bits (362), Expect = 6e-33
Identities = 128/434 (29%), Positives = 193/434 (43%), Gaps = 79/434 (18%)
Query: 7 EDRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGGDEVYAR 66
+DR S LPD +L ILS L TK V TS+ SK+W PLW+ VP L+FD + Y E Y
Sbjct: 61 KDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFDSED-YDDKEQYT- 118
Query: 67 FVEAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRV-EHIDISLHFEDD 125
F E V K L+ ++ FRL DP +I +WV + R + E + ++
Sbjct: 119 FSEIVCKSFLSHK-APVLESFRLEFESEKVDPVDIGLWVGIAFSRHLRELVLVAADTGTG 177
Query: 126 EFLELPHIVVDTPSMFSCTTLVVLKLEGLELKANFSSVDLPFLKVLHLQDLLLQDEGCLA 185
+ P S+ +C TL L+L L L S V + L+ LHL+ + +DE +
Sbjct: 178 TAFKFP------SSLCTCNTLETLRLVLLILVDISSPVVMKSLRTLHLELVSYKDESSIR 231
Query: 186 EILSGCLALEDLKARDVFFDGNKADAEFITL---PKLVRADISESGGSQHFMMKVVN--N 240
+LSGC LE+L + G +D E T+ P L R I++ Q F V+N +
Sbjct: 232 NLLSGCPILEEL----LVIRGEDSDIEVFTIDEVPSLKRLTINDDHDGQEFWGYVINAPS 287
Query: 241 VSFLRIHEI-------------------------------------------DYNLIYMG 257
+ +L I ++ + + Y
Sbjct: 288 LKYLLIEDLRCPGFCLNAPELMEANIFDGTSITNDNFLGYLTSVKRLLLNLSPWKITYPT 347
Query: 258 EDMFHNLTHLELVYTTFNRDWFEVLE-FLKYCPKLEVL--------VIKQPQFYN---VY 305
+F+ L LE+ T DW+++L L++ PKL+VL +I Q +N +
Sbjct: 348 GSIFYQLVSLEMY--TREIDWWDLLTLMLEHSPKLQVLKLTDVRHFIISQLCIFNCVKFH 405
Query: 306 LNKLGAKDWQYPSSVPECILLHLKECCLNHYR-GTKGELQFAKYIMEHGRLLNKMTICSS 364
N L W P VPEC+L HL+ + G + E + A YI+++ R LNK T S
Sbjct: 406 KNGLPGGKWNEPKYVPECLLSHLETFVWRRFDWGREEEKEIATYILKNARRLNKATF--S 463
Query: 365 TAEKQGEKLENLKK 378
T E+L+ LK+
Sbjct: 464 TNPVNSEELDKLKE 477
>dbj|BAB11270.1| unnamed protein product [Arabidopsis thaliana]
gi|42573694|ref|NP_974943.1| F-box family protein
[Arabidopsis thaliana] gi|15241211|ref|NP_200453.1|
F-box family protein [Arabidopsis thaliana]
Length = 422
Score = 137 bits (344), Expect = 7e-31
Identities = 127/434 (29%), Positives = 184/434 (42%), Gaps = 66/434 (15%)
Query: 8 DRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGGDEVYARF 67
DR S LPD L ILS L TK+ + TS+LSKRW LW VP L++D L D RF
Sbjct: 6 DRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYD---LRLHDNTCPRF 62
Query: 68 VEAVYKVIL---ARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRVEHIDISLHFED 124
+ V + +L A K + KD + VWV + + R V + +S +
Sbjct: 63 SQFVDRSLLLHKAPTLESLNIKIGSICFTAEKD---VGVWVRIGVDRFVRELSVS-YCSG 118
Query: 125 DEFLELPHIVVDTPSMFSCTTLVVLKLEGLELKANFSSVDLPFLKVLHLQDLLLQDEGCL 184
+E + LP +F+C+TL VLKLE + L+ V LK LHL D+ D+ L
Sbjct: 119 EEPIRLP------KCLFTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYLDDQSL 172
Query: 185 AEILSGCLALEDLKARDVFFDGNKA------------------------DAEFITLPKLV 220
I+S C +LEDL + D K D I PKL
Sbjct: 173 PRIISSCSSLEDLVVQRCPGDNVKVVTVTAPSLKTLSLHKSSQAFEGDDDGFLIDTPKLK 232
Query: 221 RADISESGG---------------------SQHFMMKVVNNVSFLRIHEIDYNLIYMGED 259
R DI + G + ++ + +V L + I + Y
Sbjct: 233 RVDIEDYWGGFCYIENMPEVVEANVDVIYKNTEKLLGSITSVKRLALCLITSDAAYPAGT 292
Query: 260 MFHNLTHLELVYTTFNRDWFEVLEFLKYCPKLEVLVIKQPQFYNVYLNKLGAKDWQYPSS 319
+F L HLEL T R W + ++ PKL VL ++Q + W+ P +
Sbjct: 293 IFSQLVHLELC-TCAPRWWDLLTRLIEDSPKLRVLKLRQKHIRRAPSPR---ASWKQP-A 347
Query: 320 VPECILLHLKECCLNHYRGTKGELQFAKYIMEHGRLLNKMTICSSTAEKQGEKLENLKKL 379
+P+C+L HL+ Y G++ + + A +I++H L I EK E LK L
Sbjct: 348 LPKCLLFHLETFKWELYEGSQKQKEVATFILKHAIRLKTAIISPKPTSTLLEKHEMLKDL 407
Query: 380 FSCTRCSATCKFSF 393
S R S+TC+ F
Sbjct: 408 SSSPRGSSTCELLF 421
>gb|AAN13055.1| unknown protein [Arabidopsis thaliana] gi|22328947|ref|NP_194364.2|
F-box family protein [Arabidopsis thaliana]
Length = 419
Score = 135 bits (341), Expect = 2e-30
Identities = 127/432 (29%), Positives = 193/432 (44%), Gaps = 61/432 (14%)
Query: 8 DRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGGDEVYARF 67
DR S L D +L ILS + K+ V TS+LSKRW LW V L++DDS + GD Y F
Sbjct: 2 DRISQLSDDLLLQILSFIPGKDVVATSLLSKRWQSLWMLVSELEYDDS-YHTGD--YKSF 58
Query: 68 VEAVYKVILARDFNQPIKKFRLVLTERLKDPA-NISVWVNLVLKRRVEHIDISLHFE-DD 125
+ VY+ +L+ N P+ K L L PA +I +W+ L RR+ + I++ +D
Sbjct: 59 SQFVYRSLLSN--NAPVIK-HLHLNLGPDCPAIDIGLWIGFALTRRLRQLKINIRTSSND 115
Query: 126 EFLELPHIVVDTPSMFSCTTLVVLKLEGLELKANFSSVDLPFLKVLHLQDLLLQDEGCLA 185
LP S+++ TL L+L L SSV LP LKVLHL+ + +D+ L
Sbjct: 116 ASFSLPS------SLYTSDTLETLRLINFVLLDVPSSVCLPSLKVLHLKTVDYEDDASLP 169
Query: 186 EILSGCLALEDLKAR--------DVFF-----------DGNKADAE-------------- 212
+L GC LE+L DV F D N +
Sbjct: 170 SLLFGCPNLEELFVERHDQDLEMDVTFVVPSLRRLSMIDKNYGQCDRYVIDVPSLKYLNI 229
Query: 213 ----------FITLPKLVRADISESGGSQHFMMKVVNNVSFLRIHEIDYNLIYMGEDMFH 262
+P+LV A + + G H ++ + +V L + ++ +F
Sbjct: 230 TDDAVYDVRQIENMPELVEAHVDITQGVTHKFLRALTSVRQLSLCLSLSEVMCPSGIIFS 289
Query: 263 NLTHLELVYTTFNRDWFEVL-EFLKYCPKLEVLVIKQPQFYNVYLNKLGAKDWQYPSSVP 321
L HL L +T + W+++L L+ PKL+ L + Q + W+ PSSVP
Sbjct: 290 QLVHLNL--STVVKGWWDLLTSMLQDSPKLQSLKLIDKQHESGLCGIETPIGWKLPSSVP 347
Query: 322 ECILLHLKECCLNHYRGTKGELQFAKYIMEHGRLLNKMTICSSTAEKQGEKLENLKKLFS 381
EC+L L+ Y+G +G+ + A Y++++ L S + GEK LK+L S
Sbjct: 348 ECLLFSLEAFEWIGYKGRRGDREVATYVLKNAACLRTAKF-SPESTDVGEKYHMLKELAS 406
Query: 382 CTRCSATCKFSF 393
S + K F
Sbjct: 407 VPTASTSSKLLF 418
>dbj|BAB11673.1| unnamed protein product [Arabidopsis thaliana]
gi|15242935|ref|NP_197659.1| F-box family protein
[Arabidopsis thaliana]
Length = 443
Score = 126 bits (317), Expect = 1e-27
Identities = 120/450 (26%), Positives = 195/450 (42%), Gaps = 87/450 (19%)
Query: 7 EDRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGGDEVYAR 66
+D S LPD +LC ILS L TK AV TS+LSKRW SVP L+F+ S +G Y
Sbjct: 10 QDSISLLPDDLLCRILSNLPTKVAVRTSVLSKRWKRFSLSVPLLEFNVSEFHG----YYE 65
Query: 67 FVEAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRVEHIDISLHFEDDE 126
F V+ L I K +L ++ D + ++ W++ +KR+V+H+DI +
Sbjct: 66 FARVVHG-FLDTSRETCIHKLKLAFEKKQHDRSYLTQWIHNAVKRKVQHLDIGRWSYLGQ 124
Query: 127 FLELPHIVVDTPSMFSCTTLVVLKLEGLELKANFSSVDLPFLKVLHLQDLLLQDEGCLAE 186
L +PH S+++C TLV L+L + L +F V LP LK +HL D + ++ L
Sbjct: 125 EL-IPH------SLYTCETLVSLRLHNVSLP-DFDHVSLPRLKTMHLIDNIYPNDALLEN 176
Query: 187 ILSGCLALED--------------------LKARDVFFDGNK-ADAE------FITLPKL 219
++S C LED LK+ + DG++ D E I P+L
Sbjct: 177 LISSCPVLEDLNVSRDVENIVKVLRVRSLSLKSLILALDGDRYGDIEDDSWEVVIDAPRL 236
Query: 220 VRADISESGGSQHFMMKVVN------NVSFLRIHEIDYNLI------------------- 254
+ + + V + +V+F + + N +
Sbjct: 237 SYLSLRDDQSKSFVLSSVTSPAKVDIDVTFDVVRSVLKNFLLTRSVVRNFFTRLSSVRDM 296
Query: 255 ------------YMGEDMFHNLTHLELVYTTF-NRDWFEVLEFLKYCPKLEVLVIKQPQF 301
YM + ++ Y F N D ++ FL+ CP L+ LV++ F
Sbjct: 297 TMSGTTLKVLSRYMRHEPLPQFPNMIQFYAVFCNSDLEKLPNFLESCPNLKSLVLELEVF 356
Query: 302 YNVYLNKLGAKDWQYPSSVPECILLHLKECCLN-HYRGTKGELQFAKYIMEHGRLLNKMT 360
L L SS+P+C+ L+ ++ G + E++ KY +E+ +L K T
Sbjct: 357 KKNDLLILS-------SSIPKCLRSSLEHVEIHTPISGAEAEMKLVKYFLENSAVLKKFT 409
Query: 361 ICSSTAEKQGEKLENLKKLFSCTRCSATCK 390
+ ++ E+ K+L RCSA+C+
Sbjct: 410 L-QLGCKRMDEESIIFKELLRFRRCSASCE 438
>ref|NP_173137.1| F-box family protein [Arabidopsis thaliana] gi|25518753|pir||H86304
hypothetical protein F6I1.6 - Arabidopsis thaliana
gi|9802769|gb|AAF99838.1| Hypothetical protein
[Arabidopsis thaliana]
Length = 449
Score = 126 bits (317), Expect = 1e-27
Identities = 114/438 (26%), Positives = 195/438 (44%), Gaps = 95/438 (21%)
Query: 2 KKMKMEDRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGGD 61
+K + DR S+LPD +LC ILS L+TKE+V TS+LSKRW LW VP LD D +N + D
Sbjct: 9 EKQRNSDRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLDSNN-FPDD 67
Query: 62 EVYARFVEAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRVEHIDISLH 121
+V+ FV L + Q +++F+L+ D + W+N V+KRRV H ++
Sbjct: 68 DVFVSFVNR----FLGSENEQHLERFKLIYEVNEHDASRFKSWINAVIKRRVCHFNVHNE 123
Query: 122 FEDD-EFLELPHIVVDTPSMFSCTTLVVLKLEGLELKANFSSVDLPFLKVLHLQDLLLQD 180
+DD E +++P S++SC LV L+L + L + SV LP +K++HL +
Sbjct: 124 VDDDDELVKMPL------SLYSCERLVNLQLYRVALD-HPESVSLPCVKIMHLDMVKYDA 176
Query: 181 EGCLAEILSG--------------------CLALEDLKARDVFFDGNKADAEFITL--PK 218
+ L ++SG C+ + LK+ + + ++ +T+ P+
Sbjct: 177 DSTLEILISGCPVLEELTIVRDPNDSLEVVCVRSQSLKSFKIDSERYESQNHVVTIDAPR 236
Query: 219 LVRADISESGGSQHFMMKV--VNNVSFLRIHEIDYN----------LIYMGE-------- 258
L ++ + + + V I ++YN + +G+
Sbjct: 237 LEYMNLCDHRSDSFIIHNIGPFAKVDIDVIFNVEYNDPLEPDDSSKIAMLGKFLTGLSTV 296
Query: 259 -------------------DMFHNLTHLELVYTTFNRDWFEVLE-FLKYCPKLEVLVIKQ 298
+ ++L ++ F W+E+L FL+ P L LV++
Sbjct: 297 SEMVISSDTLQVIHDYCKMEQLPQFSNLSRLHAYFEDTWWEMLPTFLESFPNLHSLVMEF 356
Query: 299 PQFYNVYLNKLGAKDWQYPSSVPECIL-----LHLKECCLNHYR-------GTKGELQFA 346
F + L S VP+C L +HLK + + + GT + + A
Sbjct: 357 DCFPDTEQIDL--------SYVPQCFLSSLEFVHLKTPYVVNMQKEGRPLTGTSSKRKLA 408
Query: 347 KYIMEHGRLLNKMTICSS 364
KY +E+G L K+T+ +S
Sbjct: 409 KYFLENGAALKKLTVSAS 426
>dbj|BAB11272.1| unnamed protein product [Arabidopsis thaliana]
gi|15241216|ref|NP_200455.1| F-box family protein
[Arabidopsis thaliana]
Length = 430
Score = 121 bits (303), Expect = 4e-26
Identities = 123/449 (27%), Positives = 191/449 (42%), Gaps = 84/449 (18%)
Query: 8 DRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGGDEVYA-R 66
DR S LPD ++ ILS + TK V+T++LSKRW LW+ VP LD+ D +L + A R
Sbjct: 2 DRISLLPDDVVFKILSFVPTKVVVSTNLLSKRWRYLWKHVPKLDYRDPSLVDTEHWRASR 61
Query: 67 FVEAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRVEHIDISLHFEDDE 126
FV+ K +L + P+ + + R P++I W+++ + RRV ++ I +
Sbjct: 62 FVD---KFLLLHE--APVLETLHLSLSRNCPPSDIETWISVAISRRVRNLHIYRYIPSTG 116
Query: 127 FLELPHIVVDTPSMFSCTTLVVLKLEGLELKANFSSVDLPF------LKVLHLQDLLLQD 180
+ LP S+++C TLV L L +F+ D PF LKVL L
Sbjct: 117 PIRLPR------SLYTCETLV-----SLYLLLDFTVDDAPFMFCFRSLKVLVLLFAKFSS 165
Query: 181 EGCLAEILSGCLALEDL----------------------------------------KAR 200
+ + +LSGC LE L KA
Sbjct: 166 DEIVNRLLSGCPVLEGLILIRRNDNVKNFTIAAPSLQRLIAIDCRSQVPGDDVGFVIKAP 225
Query: 201 DVF------FDGNKADAEFITLPKLVRADISESGGSQHFMMKVVNNVSFLRIHEIDYNLI 254
+ F + + +P LV+A I G M + + L + + L
Sbjct: 226 SLKSLTLLNFSPHSGFRSLVKMPDLVKASIKVRHGDSKMFMGCLTSTKRLALC-LQPPLD 284
Query: 255 YMGEDMFHNLTHLELVYTTFNRDWFEVLEFLKYCPKLEVLVIKQPQ--FYNVY--LNKLG 310
+F+ L L L T + W ++ L + PKL VL +Q Q FY + L +
Sbjct: 285 SCPIGVFNQLVSLSLC--TCSLGWCRLI--LNHTPKLRVLRFEQRQAKFYQLLDPLKRCC 340
Query: 311 AKD------WQYPSSVPECILLHLKECCLNHYRGTKGELQFAKYIMEHGRLLNKMTICSS 364
+ W+ PSSVP+C++ L+ Y+G + E + Y++E+ R L M I S
Sbjct: 341 SSSVDVQTQWEQPSSVPKCLISSLETVEWIDYKGREVEKKVVMYLLENSRQLKTMAIRSL 400
Query: 365 TAEKQGEKLENLKKLFSCTRCSATCKFSF 393
+ EKL+ L++L S R C SF
Sbjct: 401 KSTNDNEKLKMLQELSSIHRICTKCGLSF 429
>gb|AAM91640.1| unknown protein [Arabidopsis thaliana] gi|18414142|ref|NP_567422.1|
F-box family protein [Arabidopsis thaliana]
Length = 381
Score = 118 bits (296), Expect = 3e-25
Identities = 90/218 (41%), Positives = 121/218 (55%), Gaps = 16/218 (7%)
Query: 8 DRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDS---NLYGGDEVY 64
D SSLPD I HILS L TKEA +TS+LSK+W L+ VP LD DDS N E+
Sbjct: 8 DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEIS 67
Query: 65 ARFVEAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRVEHIDISLHFED 124
F++ V +V LA N P+ KF L + + + DP I W+N VL+R V +D+ L+ E
Sbjct: 68 TSFMDFVDRV-LALQGNSPLHKFSLKIGDGI-DPVRIIPWINNVLERGVSDLDLHLNLE- 124
Query: 125 DEFLELPHIVVDTPSMFSCTTLVVLKLE-GLELKANFSSVDLPFLKVLHLQDLLLQDEGC 183
EFL LP ++ C TLV LKL GL + V LP LK L+++ ++ G
Sbjct: 125 SEFL-LP------SQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGV 177
Query: 184 -LAEILSGCLALEDLKARDV-FFDGNKADAEFITLPKL 219
L ++LSGC LEDL D+ +F + A TL +L
Sbjct: 178 GLTKLLSGCPMLEDLVLDDISWFIWDFASVSVPTLKRL 215
>gb|AAS99714.1| At2g04230 [Arabidopsis thaliana] gi|42568929|ref|NP_178506.3| F-box
family protein [Arabidopsis thaliana]
gi|51971311|dbj|BAD44320.1| hypothetical protein
[Arabidopsis thaliana]
Length = 448
Score = 117 bits (293), Expect = 6e-25
Identities = 121/429 (28%), Positives = 191/429 (44%), Gaps = 74/429 (17%)
Query: 7 EDRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDS--NLYGGDEVY 64
EDR S LPD +L ILS L T+ A+ TS+LSKRW LW +P L FD + ++ D +
Sbjct: 12 EDRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDSNFNPVFDDDNID 71
Query: 65 -ARFVEAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRVEHIDISLHFE 123
F E VYK + P+ + + E D ++ +W+ R V + + ++
Sbjct: 72 PTMFSENVYKTLSLH--KAPVLESLHLSFEGRTDCLHVGIWIATAFARGVRKLVLDSFYQ 129
Query: 124 DDEFLELPHIVVDTPSMFSCT-TLVVLKLEGLELKANFSS-VDLPFLKVLHLQDLLLQDE 181
+D+ + LP + +FS +L +LKL+ + +F S V L L+ L+L + +DE
Sbjct: 130 EDQTVTLPSV------LFSYNDSLEILKLK-CAIDLDFPSRVCLKSLRKLYLDQVHFKDE 182
Query: 182 GCLAEILSGCLALEDLKARDVFFDGNKADAEFIT-----LPKLVRADISESGGSQHFMMK 236
+ +L GC +L+DL V + AD T L +L D+ + GG +
Sbjct: 183 ESVCNLLCGCPSLQDL----VVHRYSNADVATFTIASPSLQRLTIEDLRQEGGYGNGSY- 237
Query: 237 VVN--NVSFLRIH---EIDYNLI----------------YMGEDMFHNLT-------HLE 268
V+N + +L I+ +I+ LI E++ +LT HL
Sbjct: 238 VINAPGLKYLNINGVIDIESCLIDKALELEEAKISNVSGITNENILESLTSAKRLILHLS 297
Query: 269 -----------------LVYTTFNRDWFEVLEF-LKYCPKLEVLVIKQPQFYNVYLNKLG 310
L T R+W+ +L L PKL++L + ++ N
Sbjct: 298 PLEVKVPTGKIFDQLGCLELLTHEREWWNLLSIMLDSSPKLQILKLTDVYLHDNKTNP-D 356
Query: 311 AKDWQYPSSVPECILLHLKECCLNHYRGTKG-ELQFAKYIMEHGRLLNKMTICSSTAEKQ 369
+ W P PEC+L HL+ Y +G E + A YI+E+ R L K T ST
Sbjct: 357 ERKWNPPKCAPECLLFHLETFLWIGYEWQRGDEKEVATYILENARRLKKATF--STKRIG 414
Query: 370 GEKLENLKK 378
EKLE+ +K
Sbjct: 415 REKLEDFEK 423
>gb|AAD27915.1| hypothetical protein [Arabidopsis thaliana] gi|25411064|pir||D84455
hypothetical protein At2g04230 [imported] - Arabidopsis
thaliana
Length = 454
Score = 115 bits (289), Expect = 2e-24
Identities = 127/443 (28%), Positives = 196/443 (43%), Gaps = 87/443 (19%)
Query: 7 EDRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDS--NLYGGDEVY 64
EDR S LPD +L ILS L T+ A+ TS+LSKRW LW +P L FD + ++ D +
Sbjct: 3 EDRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDSNFNPVFDDDNID 62
Query: 65 -ARFVEAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRVEHIDISLHFE 123
F E VYK + P+ + + E D ++ +W+ R V + + ++
Sbjct: 63 PTMFSENVYKTLSLH--KAPVLESLHLSFEGRTDCLHVGIWIATAFARGVRKLVLDSFYQ 120
Query: 124 DDEFLELPHIVVDTPSMFSCT-TLVVLKLEGLELKANFSS-VDLPFLKVLHLQDLLLQDE 181
+D+ + LP + +FS +L +LKL+ + +F S V L L+ L+L + +DE
Sbjct: 121 EDQTVTLPSV------LFSYNDSLEILKLK-CAIDLDFPSRVCLKSLRKLYLDQVHFKDE 173
Query: 182 GCLAEILSGCLALEDLKARDVFFDGNKADAEFIT-----LPKLVRADISESGGSQHFMMK 236
+ +L GC +L+DL V + AD T L +L D+ + GG +
Sbjct: 174 ESVCNLLCGCPSLQDL----VVHRYSNADVATFTIASPSLQRLTIEDLRQEGGYGNGSY- 228
Query: 237 VVN--NVSFLRIH---EIDYNLI----------------YMGEDMFHNLT-------HLE 268
V+N + +L I+ +I+ LI E++ +LT HL
Sbjct: 229 VINAPGLKYLNINGVIDIESCLIDKALELEEAKISNVSGITNENILESLTSAKRLILHLS 288
Query: 269 -----------------LVYTTFNRDWFEVLEF-LKYCPKLEVLVIKQ---------PQF 301
L T R+W+ +L L PKL++L + PQ
Sbjct: 289 PLEVKVPTGKIFDQLGCLELLTHEREWWNLLSIMLDSSPKLQILKLTDVSNFTSCLFPQL 348
Query: 302 -YNVYL--NKLGAKD--WQYPSSVPECILLHLKECCLNHYRGTKG-ELQFAKYIMEHGRL 355
+ VYL NK + W P PEC+L HL+ Y +G E + A YI+E+ R
Sbjct: 349 HFQVYLHDNKTNPDERKWNPPKCAPECLLFHLETFLWIGYEWQRGDEKEVATYILENARR 408
Query: 356 LNKMTICSSTAEKQGEKLENLKK 378
L K T ST EKLE+ +K
Sbjct: 409 LKKATF--STKRIGREKLEDFEK 429
>gb|AAO37194.1| hypothetical protein [Arabidopsis thaliana]
Length = 405
Score = 114 bits (286), Expect = 4e-24
Identities = 121/410 (29%), Positives = 177/410 (42%), Gaps = 71/410 (17%)
Query: 8 DRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGGDEVYARF 67
DR S LPD +L IL L TKE V+TSILSKRW LW VP L F N Y D F
Sbjct: 2 DRISGLPDELLVEILHCLPTKEVVSTSILSKRWEFLWLWVPKLTF-VMNHYESDLPIQDF 60
Query: 68 VEAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRVEHIDISLHFEDDEF 127
+ +++ Q I+ F L P +I WV + RRV ++ +++ D +
Sbjct: 61 ITKNLRLLKP----QVIESFHLQCFSSSFKPEDIKHWVVTTISRRVR--ELIINYCDLSW 114
Query: 128 LELPHIVVDTP-SMFSCTTLVVLKLEGLELKANF-SSVDLPFLKVLHLQDLLLQDEGCLA 185
L+ P +++D P S+++CT+LV LKL G + + +V LP LK L L + +E L
Sbjct: 115 LDKPVVLLDLPNSLYTCTSLVTLKLIGHSIIVDVPXTVSLPCLKTLELDSVAYSNEESLR 174
Query: 186 EILSGCLALEDLKARDVFFDGNKADAEFITLPKLVRADISESGG-SQHFMMKVVNNVSFL 244
+LS C LEDL D K I +P L+R ++ G S + V + +L
Sbjct: 175 LLLSYCPVLEDLTIHRDMHDNVK--TLVIIVPSLLRLNLPIDGAYSCDGYVIVTPALKYL 232
Query: 245 RI-----HEIDYNLIYM------------------------------------GEDMFHN 263
++ + Y L +M E M+HN
Sbjct: 233 KVPGLYREDFSYLLTHMPNVEEADLSVEQDVERLFESITSVKRLSLFVLLDIEDESMYHN 292
Query: 264 ------LTHLELVYTTFNRDWFEVL-EFLKYCPKLEVLVI---KQPQFYNVYLNKLGAKD 313
L HL L + +W ++L L+ PKL VL I +P F + +
Sbjct: 293 GIYFNQLEHLNL--HIYRDNWSKLLVRLLEDSPKLRVLKIVVDGEPSFDEEFEH----VS 346
Query: 314 WQY--PSSVPECILLHLKECCLNHYRGTKGELQFAKYIMEHGRLLNKMTI 361
W Y SSVP+C+L L+ Y E F +I++H L +I
Sbjct: 347 WIYNDESSVPKCLLDSLEVFEFAGYTRXPEERDFVSFILKHACHLKSSSI 396
>gb|AAC32239.1| hypothetical protein [Arabidopsis thaliana] gi|7485393|pir||T02649
hypothetical protein At2g26860 [imported] - Arabidopsis
thaliana gi|15225804|ref|NP_180254.1| F-box family
protein [Arabidopsis thaliana]
Length = 405
Score = 114 bits (284), Expect = 7e-24
Identities = 121/410 (29%), Positives = 177/410 (42%), Gaps = 71/410 (17%)
Query: 8 DRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGGDEVYARF 67
DR S LPD +L IL L TKE V+TSILSKRW LW VP L F N Y D F
Sbjct: 2 DRISGLPDELLVEILHCLPTKEVVSTSILSKRWEFLWLWVPKLTF-VMNHYESDLPIQDF 60
Query: 68 VEAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRVEHIDISLHFEDDEF 127
+ +++ Q I+ F L P +I WV + RRV ++ +++ D +
Sbjct: 61 ITKNLRLLKP----QVIESFHLQCFSSSFKPEDIKHWVVTTISRRVR--ELIINYCDLSW 114
Query: 128 LELPHIVVDTP-SMFSCTTLVVLKLEGLELKANF-SSVDLPFLKVLHLQDLLLQDEGCLA 185
L+ P +++D P S+++CT+LV LKL G + + +V LP LK L L + +E L
Sbjct: 115 LDKPVVLLDLPNSLYTCTSLVTLKLIGHSIIVDVPRTVSLPCLKTLELDSVAYSNEESLR 174
Query: 186 EILSGCLALEDLKARDVFFDGNKADAEFITLPKLVRADISESGG-SQHFMMKVVNNVSFL 244
+LS C LEDL D K I +P L+R ++ G S + V + +L
Sbjct: 175 LLLSYCPVLEDLTIHRDMHDNVK--TLVIIVPSLLRLNLPIDGAYSCDGYVIVTPALKYL 232
Query: 245 RI-----HEIDYNLIYM------------------------------------GEDMFHN 263
++ + Y L +M E M+HN
Sbjct: 233 KVPGLYREDFSYLLTHMPNVEEADLSVEQDVERLFESITSVKRLSLFVLLDIEDESMYHN 292
Query: 264 ------LTHLELVYTTFNRDWFEVL-EFLKYCPKLEVLVI---KQPQFYNVYLNKLGAKD 313
L HL L + +W ++L L+ PKL VL I +P F + +
Sbjct: 293 GIYFNQLEHLNL--HIYRDNWSKLLVRLLEDSPKLRVLKIVVDGEPSFDEEFEH----VS 346
Query: 314 WQY--PSSVPECILLHLKECCLNHYRGTKGELQFAKYIMEHGRLLNKMTI 361
W Y SSVP+C+L L+ Y E F +I++H L +I
Sbjct: 347 WIYNDESSVPKCLLDSLEVFEFAGYTRRPEERDFVSFILKHACHLKSSSI 396
>emb|CAB10188.1| hypothetical protein [Arabidopsis thaliana]
gi|7268114|emb|CAB78451.1| hypothetical protein
[Arabidopsis thaliana] gi|7485037|pir||B71402
hypothetical protein - Arabidopsis thaliana
Length = 1047
Score = 112 bits (281), Expect = 2e-23
Identities = 108/347 (31%), Positives = 157/347 (45%), Gaps = 63/347 (18%)
Query: 1 MKKMKME---DRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDS-- 55
+KKM + D SSLP+ I CHILS L TKEA +TS+LSK+W L+ VP LD D+S
Sbjct: 253 LKKMDLSGCRDIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVY 312
Query: 56 -NLYGGDEVYARFVEAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRVE 114
N EV + F++ V +V LA N P+ KF L + + + +P I W+N VL+R V
Sbjct: 313 LNPENETEVSSSFMDFVDRV-LALQGNSPLHKFSLKIGDGV-EPDRIIPWINNVLERGVS 370
Query: 115 HIDISLHFEDDEFLELPHIVVDTPSMFSCTTLVVLKLEGLELKANFSSVDLPFLKVLHLQ 174
+D+ ++ E + V MF TLV LKL L F V LP LK L++
Sbjct: 371 DLDLHVYMETE--------FVFPSEMFLSKTLVRLKLMLYPL-LEFEDVYLPKLKTLYID 421
Query: 175 DLLLQDEGC-LAEILSGCLALEDLKARDV------FFDGNKADAEFITLPKLVRADISES 227
+ G L ++LSGC LEDL D+ F + + +T VR + +S
Sbjct: 422 SCYFEKYGIGLTKLLSGCPILEDLVLDDIPWCTWDFASVSVPTLKRLTFSTQVRDEFPKS 481
Query: 228 ----------------------------------GGSQHFMMKVVNNVSFLRIHEIDYNL 253
G + F+M++ NV L + +
Sbjct: 482 VSIDTPNLVYLKFTDTVAGKYPKGHQGYGENDMVGNATDFIMRIC-NVKTLYLSSNTLQV 540
Query: 254 IYMGED---MFHNLTHLELVYTTFNRDWFEVLEFLKYCPKLEVLVIK 297
+ D +F+NLTHL + + W + LK P LE L+ +
Sbjct: 541 LTYSCDAIPIFNNLTHL-TIESNPEVGWQSLPGLLKNSPNLETLIFQ 586
Score = 99.8 bits (247), Expect = 1e-19
Identities = 83/228 (36%), Positives = 115/228 (50%), Gaps = 37/228 (16%)
Query: 1 MKKMKME---DRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDS-- 55
+K+M + D SSLPD I HILS L TKEA +TS+LSK+W L+ VP LD DDS
Sbjct: 684 LKRMDLSGSRDVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVY 743
Query: 56 -NLYGGDEVYARFVEAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRVE 114
N E+ F++ V +V+ + I W+N VL+R V
Sbjct: 744 LNPENETEISTSFMDFVDRVLALQ--------------------VRIIPWINNVLERGVS 783
Query: 115 HIDISLHFEDDEFLELPHIVVDTPSMFSCTTLVVLKLE-GLELKANFSSVDLPFLKVLHL 173
+D+ L+ E EFL LP ++ C TLV LKL GL + V LP LK L++
Sbjct: 784 DLDLHLNLE-SEFL-LP------SQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYI 835
Query: 174 QDLLLQDEGC-LAEILSGCLALEDLKARDV-FFDGNKADAEFITLPKL 219
+ ++ G L ++LSGC LEDL D+ +F + A TL +L
Sbjct: 836 EATHFEEHGVGLTKLLSGCPMLEDLVLDDISWFIWDFASVSVPTLKRL 883
>gb|AAL09802.1| AT5g56420/MCD7_18 [Arabidopsis thaliana]
Length = 401
Score = 111 bits (277), Expect = 4e-23
Identities = 113/418 (27%), Positives = 170/418 (40%), Gaps = 66/418 (15%)
Query: 24 LLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGGDEVYARFVEAVYKVIL---ARDF 80
+ + K + LSKRW LW VP L++D L D RF + V + +L A
Sbjct: 1 MASNKRCFSDESLSKRWRFLWTLVPRLNYD---LRLHDNTCPRFSQFVDRSLLLHKAPTL 57
Query: 81 NQPIKKFRLVLTERLKDPANISVWVNLVLKRRVEHIDISLHFEDDEFLELPHIVVDTPSM 140
K + KD + VWV + + R V + +S + +E + LP +
Sbjct: 58 ESLNIKIGSICFTAEKD---VGVWVRIGVDRFVRELSVS-YCSGEEPIRLPKC------L 107
Query: 141 FSCTTLVVLKLEGLELKANFSSVDLPFLKVLHLQDLLLQDEGCLAEILSGCLALEDLKAR 200
F+C+TL VLKLE + L+ V LK LHL D+ D+ L I+S C +LEDL +
Sbjct: 108 FTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYLDDQSLPRIISSCSSLEDLVVQ 167
Query: 201 DVFFDGNKA------------------------DAEFITLPKLVRADISESGG------- 229
D K D I PKL R DI + G
Sbjct: 168 RCPGDNVKVVTVTAPSLKTLSLHKSSQAFEGDDDGFLIDTPKLKRVDIEDYWGGFCYIEN 227
Query: 230 --------------SQHFMMKVVNNVSFLRIHEIDYNLIYMGEDMFHNLTHLELVYTTFN 275
+ ++ + +V L + I + Y +F L HLEL T
Sbjct: 228 MPEVVEANVDVIYKNTEKLLGSITSVKRLALCLITSDAAYPAGTIFSQLVHLELC-TCAP 286
Query: 276 RDWFEVLEFLKYCPKLEVLVIKQPQFYNVYLNKLGAKDWQYPSSVPECILLHLKECCLNH 335
R W + ++ PKL VL ++Q + W+ P ++P+C+L HL+
Sbjct: 287 RWWDLLTRLIEDSPKLRVLKLRQKHIRRAPSPR---ASWKQP-ALPKCLLFHLETFKWEL 342
Query: 336 YRGTKGELQFAKYIMEHGRLLNKMTICSSTAEKQGEKLENLKKLFSCTRCSATCKFSF 393
Y G++ + + A +I++H L I EK E LK L S R S+TC+ F
Sbjct: 343 YEGSQKQKEVATFILKHAIRLKTAIISPKPTSTLLEKHEMLKDLSSSPRGSSTCELLF 400
>gb|AAM91134.1| unknown protein [Arabidopsis thaliana] gi|14596145|gb|AAK68800.1|
Unknown protein [Arabidopsis thaliana]
gi|18414140|ref|NP_567421.1| F-box family protein
[Arabidopsis thaliana]
Length = 468
Score = 110 bits (275), Expect = 7e-23
Identities = 80/199 (40%), Positives = 108/199 (54%), Gaps = 15/199 (7%)
Query: 8 DRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDS---NLYGGDEVY 64
D SSLP+ I CHILS L TKEA +TS+LSK+W L+ VP LD D+S N EV
Sbjct: 8 DIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVYLNPENETEVS 67
Query: 65 ARFVEAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRVEHIDISLHFED 124
+ F++ V +V LA N P+ KF L + + + +P I W+N VL+R V +D+ ++ E
Sbjct: 68 SSFMDFVDRV-LALQGNSPLHKFSLKIGDGV-EPDRIIPWINNVLERGVSDLDLHVYMET 125
Query: 125 DEFLELPHIVVDTPSMFSCTTLVVLKLEGLELKANFSSVDLPFLKVLHLQDLLLQDEGC- 183
+ V MF TLV LKL L F V LP LK L++ + G
Sbjct: 126 E--------FVFPSEMFLSKTLVRLKLMLYPL-LEFEDVYLPKLKTLYIDSCYFEKYGIG 176
Query: 184 LAEILSGCLALEDLKARDV 202
L ++LSGC LEDL D+
Sbjct: 177 LTKLLSGCPILEDLVLDDI 195
>dbj|BAB10659.1| unnamed protein product [Arabidopsis thaliana]
gi|15238204|ref|NP_198999.1| F-box family protein
[Arabidopsis thaliana]
Length = 540
Score = 108 bits (270), Expect = 3e-22
Identities = 85/241 (35%), Positives = 123/241 (50%), Gaps = 32/241 (13%)
Query: 8 DRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDS---------NLY 58
DR S LPD ++CHILS L TKEA +T++L+KRW PL VP L+FDDS N Y
Sbjct: 14 DRISGLPDALICHILSFLPTKEAASTTVLAKRWKPLLAFVPNLNFDDSIYFHPRARRNKY 73
Query: 59 GGD-EVYARFVEAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRVEHID 117
E + FV++V + L P+K+F V E + D + + W+ VLKR V ID
Sbjct: 74 SKSYESFMSFVDSV--LALQAKTKTPLKRFH-VKCEDVVDQSWVLEWIPKVLKRGVLDID 130
Query: 118 ISL-----HFEDDEFLELPHIVVDTPSMFSCTTLVVLKL---EGLELKANFSSVDLPFLK 169
+ + + E+ F LP +F TLV LK+ +G+ + V LP LK
Sbjct: 131 LHITSSRNYCENSSFYSLP------SKIFVSKTLVRLKIQFQDGVHIDVE-GGVSLPKLK 183
Query: 170 VLHLQDLLLQDEGCLAEILSGCLALEDLKARDVFFDGNKADAE---FITLPKLVRADISE 226
LHL D + L ++LSGC ALE+L ++ + + D +++P L R +
Sbjct: 184 TLHL-DYFKIETSMLNKLLSGCHALEELVLANLMWADSSEDEACHVSVSIPTLKRLNFCR 242
Query: 227 S 227
S
Sbjct: 243 S 243
>ref|NP_199307.2| F-box family protein [Arabidopsis thaliana]
Length = 377
Score = 108 bits (270), Expect = 3e-22
Identities = 109/408 (26%), Positives = 184/408 (44%), Gaps = 56/408 (13%)
Query: 4 MKMEDRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVP-----TLDFDDSNLY 58
M+ D S PD +L IL L TK++V TS+LSKRW LW +VP T DF Y
Sbjct: 1 MEEFDYISEFPDCLLTQILLNLPTKDSVKTSVLSKRWRNLWLNVPGLRLRTFDFPVFP-Y 59
Query: 59 GGDEVYARFVEAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRVEHIDI 118
+E + RF++ + ++KF + E + + ++ R ++H+ +
Sbjct: 60 PYEEGFVRFMDR----FMEFKCRSRLQKFMITYFEHNGYRDRLMELIGTLVDRGIQHLYV 115
Query: 119 SLHFEDDEFLELPHIVVDTPSMFSCTTLVVLKLEGLELKANFSSVDLPFLKVLHLQDLLL 178
+H + +++ TLV LKL +ELK V LP LK+L L+++
Sbjct: 116 YMH-------TCNRVDFIRQNIYKSKTLVSLKLYNVELKNPEFVVSLPCLKILKLENIFH 168
Query: 179 QDEGCLA--EILSGCLALEDLKARDVFFDGNKADAEFITLPKLVR-ADISESGGSQHFMM 235
++G L +++SGC LEDL+ F D +T PK R DI +
Sbjct: 169 GEDGPLVVEKLISGCPVLEDLELIRPFDD--NVGYGSLTAPKYSRNRDIIGD------FL 220
Query: 236 KVVNNVSFLRIHEIDYNLIYMGE------DMFHNLTHLELVYTTFNRDWFEV-LEFLKYC 288
V+++V I ++Y FHNL HL+ +++ + LE C
Sbjct: 221 TVISSVRHTIICYSTSKMLYSYSKQLGPIPQFHNLYHLQARFSSSSLQLLPTFLESCPAC 280
Query: 289 PKLEVLVIKQP-QFYNVYLNKLGAKDWQYPSSVPECIL-----LHLKECCLNHYRGTKGE 342
P L+ L+++ P + N+ +K VP+C++ + ++E L G K
Sbjct: 281 PNLKNLIMEFPFEPKNIDFHK-----------VPQCLISTLEYVQIEELILKEKSGIK-- 327
Query: 343 LQFAKYIMEHGRLLNKMTICSSTAEKQGEKLENLKKLFSCTRCSATCK 390
Y +E+ +L K+T+ + K+ + E+ KKL + T+ S TC+
Sbjct: 328 --LVDYFLENSAVLKKLTLSFTYHSKKKQDPESYKKLLTSTKLSPTCQ 373
>gb|AAO37193.1| hypothetical protein [Arabidopsis thaliana]
Length = 355
Score = 106 bits (265), Expect = 1e-21
Identities = 97/313 (30%), Positives = 150/313 (46%), Gaps = 26/313 (8%)
Query: 8 DRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGGDEVYARF 67
DR S LPD +L IL L TKE V+TSILSKRW LW VP L F N Y D F
Sbjct: 2 DRISGLPDELLVEILHCLPTKEVVSTSILSKRWEFLWLWVPKLTF-VMNHYESDLPIQDF 60
Query: 68 VEAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRVEHIDISLHFEDDEF 127
+ +++ Q I+ F L P +I WV + RRV ++ +++ D +
Sbjct: 61 ITKNLRLLKP----QVIESFHLQCFSSSFKPEDIKHWVVTTISRRVR--ELIINYCDLSW 114
Query: 128 LELPHIVVDTP-SMFSCTTLVVLKLEGLELKANF-SSVDLPFLKVLHLQDLLLQDEGCLA 185
L+ P +++D P S+++CT+LV LKL G + + +V LP LK L L + +E L
Sbjct: 115 LDKPVVLLDLPNSLYTCTSLVTLKLIGHSIIVDVPRTVSLPCLKTLELDSVAYSNEESLR 174
Query: 186 EILSGCLALEDLKARDVFFDGNKADAEFITLPKLVRADISESGG-SQHFMMKVVNNVSFL 244
+LS C LEDL D K I +P L+R ++ G S + V + +L
Sbjct: 175 LLLSYCPVLEDLTIHRDMHDNVK--TLVIIVPSLLRLNLPIDGAYSCDGYVIVTPALKYL 232
Query: 245 RIHEIDYNLIYMGEDMFHNLTHL---ELVYTTFNRDWFEVLEFLKYCPKLEVLVI----K 297
++ + ED + LTH+ E + +D + E + +L + V+
Sbjct: 233 KVPGL------YREDFSYLLTHMPNVEEADLSVEQDVERLFESITSVKRLSLFVLLDIED 286
Query: 298 QPQFYN-VYLNKL 309
+ ++N +Y N+L
Sbjct: 287 ESMYHNGIYFNQL 299
>ref|NP_973538.1| F-box family protein [Arabidopsis thaliana]
Length = 355
Score = 106 bits (265), Expect = 1e-21
Identities = 97/313 (30%), Positives = 150/313 (46%), Gaps = 26/313 (8%)
Query: 8 DRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGGDEVYARF 67
DR S LPD +L IL L TKE V+TSILSKRW LW VP L F N Y D F
Sbjct: 2 DRISGLPDELLVEILHCLPTKEVVSTSILSKRWEFLWLWVPKLTF-VMNHYESDLPIQDF 60
Query: 68 VEAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRVEHIDISLHFEDDEF 127
+ +++ Q I+ F L P +I WV + RRV ++ +++ D +
Sbjct: 61 ITKNLRLLKP----QVIESFHLQCFSSSFKPEDIKHWVVTTISRRVR--ELIINYCDLSW 114
Query: 128 LELPHIVVDTP-SMFSCTTLVVLKLEGLELKANF-SSVDLPFLKVLHLQDLLLQDEGCLA 185
L+ P +++D P S+++CT+LV LKL G + + +V LP LK L L + +E L
Sbjct: 115 LDKPVVLLDLPNSLYTCTSLVTLKLIGHSIIVDVPRTVSLPCLKTLELDSVAYSNEESLR 174
Query: 186 EILSGCLALEDLKARDVFFDGNKADAEFITLPKLVRADISESGG-SQHFMMKVVNNVSFL 244
+LS C LEDL D K I +P L+R ++ G S + V + +L
Sbjct: 175 LLLSYCPVLEDLTIHRDMHDNVK--TLVIIVPSLLRLNLPIDGAYSCDGYVIVTPALKYL 232
Query: 245 RIHEIDYNLIYMGEDMFHNLTHL---ELVYTTFNRDWFEVLEFLKYCPKLEVLVI----K 297
++ + ED + LTH+ E + +D + E + +L + V+
Sbjct: 233 KVPGL------YREDFSYLLTHMPNVEEADLSVEQDVERLFESITSVKRLSLFVLLDIED 286
Query: 298 QPQFYN-VYLNKL 309
+ ++N +Y N+L
Sbjct: 287 ESMYHNGIYFNQL 299
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.324 0.140 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 659,590,778
Number of Sequences: 2540612
Number of extensions: 27489254
Number of successful extensions: 74032
Number of sequences better than 10.0: 552
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 72873
Number of HSP's gapped (non-prelim): 874
length of query: 394
length of database: 863,360,394
effective HSP length: 130
effective length of query: 264
effective length of database: 533,080,834
effective search space: 140733340176
effective search space used: 140733340176
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 76 (33.9 bits)
Lotus: description of TM0487.13