BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0487.10
(289 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB78163.1| putative protein [Arabidopsis thaliana] gi|45389... 107 4e-22
ref|NP_192778.2| F-box family protein [Arabidopsis thaliana] 107 4e-22
emb|CAB80790.1| AT4g00320 [Arabidopsis thaliana] gi|6049880|gb|A... 106 9e-22
ref|NP_849271.1| F-box family protein [Arabidopsis thaliana] 106 9e-22
gb|AAF79496.1| F20N2.9 [Arabidopsis thaliana] 105 1e-21
ref|NP_175962.1| F-box family protein [Arabidopsis thaliana] 105 1e-21
emb|CAB78115.1| hypothetical protein (probably remnant) [Arabido... 104 3e-21
ref|NP_192730.2| F-box family protein [Arabidopsis thaliana] 104 3e-21
ref|NP_193242.2| F-box protein-related [Arabidopsis thaliana] 103 7e-21
gb|AAQ22628.1| At5g38590/MBB18_14 [Arabidopsis thaliana] gi|3069... 102 2e-20
dbj|BAB10149.1| unnamed protein product [Arabidopsis thaliana] g... 102 2e-20
dbj|BAB11272.1| unnamed protein product [Arabidopsis thaliana] g... 101 3e-20
emb|CAB91590.1| putative protein [Arabidopsis thaliana] gi|26450... 100 4e-20
ref|NP_173137.1| F-box family protein [Arabidopsis thaliana] gi|... 100 4e-20
emb|CAB80774.1| hypothetical protein [Arabidopsis thaliana] gi|3... 100 5e-20
gb|AAM61661.1| unknown [Arabidopsis thaliana] 100 5e-20
dbj|BAB11673.1| unnamed protein product [Arabidopsis thaliana] g... 100 5e-20
ref|NP_567152.1| F-box family protein [Arabidopsis thaliana] 100 5e-20
emb|CAB10188.1| hypothetical protein [Arabidopsis thaliana] gi|7... 100 8e-20
gb|AAY78864.1| F-box family protein [Arabidopsis thaliana] gi|18... 99 1e-19
>emb|CAB78163.1| putative protein [Arabidopsis thaliana] gi|4538969|emb|CAB39793.1|
putative protein [Arabidopsis thaliana]
gi|7486073|pir||T04055 hypothetical protein F24G24.200 -
Arabidopsis thaliana
Length = 326
Score = 107 bits (267), Expect = 4e-22
Identities = 89/269 (33%), Positives = 135/269 (50%), Gaps = 31/269 (11%)
Query: 3 DRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDF-----DEANFRRTKG 57
DRIS LPDE+L ILSF+PTK AV+TSILSKRW+ LW +T L F E+ F+R +
Sbjct: 2 DRISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSESEFKRLQC 61
Query: 58 WHSRFVQSVHRVIHTPDFLQPIQKLRMSFVSRHSEVPSNVNVWVNAAVQRGGFEHVDICI 117
+ R + +HR I+ R+ H + P ++ +WV AV R E + I
Sbjct: 62 FLDRNL-PLHRA-------PVIESFRLVLSDSHFK-PEDIRMWVVVAVSRYIRE---LKI 109
Query: 118 YS-----LSPLNLSSIFSCKTLVVLKLEGLDLNTTVSSVDLPFLKVLHLQVLQLSQRRCL 172
YS + SS+++CK+LV+LKL+G L V LP LK L L+ ++ ++ L
Sbjct: 110 YSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFKQGSL 169
Query: 173 AQLLNGCPVLEDLKAKAIYFKKYKETGFEYKTLSKLVRADISGTSTDLFRMEVINNVDFL 232
+LL CPVLEDL + + G + L R +S S+ F ++ + + F
Sbjct: 170 QRLLCNCPVLEDL---VVNLSHHDNMGKLTVIVPSLQRLSLSTPSSREFVIDTPSLLSFQ 226
Query: 233 RIHEIYIRIPHDDQFTDMFHNLTHIELGY 261
+ +D+ T + N+ + Y
Sbjct: 227 LVDR------NDNSHTFLIENMPKLREAY 249
>ref|NP_192778.2| F-box family protein [Arabidopsis thaliana]
Length = 409
Score = 107 bits (267), Expect = 4e-22
Identities = 89/269 (33%), Positives = 135/269 (50%), Gaps = 31/269 (11%)
Query: 3 DRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDF-----DEANFRRTKG 57
DRIS LPDE+L ILSF+PTK AV+TSILSKRW+ LW +T L F E+ F+R +
Sbjct: 2 DRISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSESEFKRLQC 61
Query: 58 WHSRFVQSVHRVIHTPDFLQPIQKLRMSFVSRHSEVPSNVNVWVNAAVQRGGFEHVDICI 117
+ R + +HR I+ R+ H + P ++ +WV AV R E + I
Sbjct: 62 FLDRNL-PLHRA-------PVIESFRLVLSDSHFK-PEDIRMWVVVAVSRYIRE---LKI 109
Query: 118 YS-----LSPLNLSSIFSCKTLVVLKLEGLDLNTTVSSVDLPFLKVLHLQVLQLSQRRCL 172
YS + SS+++CK+LV+LKL+G L V LP LK L L+ ++ ++ L
Sbjct: 110 YSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFKQGSL 169
Query: 173 AQLLNGCPVLEDLKAKAIYFKKYKETGFEYKTLSKLVRADISGTSTDLFRMEVINNVDFL 232
+LL CPVLEDL + + G + L R +S S+ F ++ + + F
Sbjct: 170 QRLLCNCPVLEDL---VVNLSHHDNMGKLTVIVPSLQRLSLSTPSSREFVIDTPSLLSFQ 226
Query: 233 RIHEIYIRIPHDDQFTDMFHNLTHIELGY 261
+ +D+ T + N+ + Y
Sbjct: 227 LVDR------NDNSHTFLIENMPKLREAY 249
>emb|CAB80790.1| AT4g00320 [Arabidopsis thaliana] gi|6049880|gb|AAF02795.1| F5I10.18
gene product [Arabidopsis thaliana]
gi|2252838|gb|AAB62837.1| A_IG005I10.18 gene product
[Arabidopsis thaliana] gi|7485263|pir||T01539
hypothetical protein A_IG005I10.18 - Arabidopsis
thaliana
Length = 773
Score = 106 bits (264), Expect = 9e-22
Identities = 70/210 (33%), Positives = 114/210 (53%), Gaps = 6/210 (2%)
Query: 3 DRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDFDEANFRRTKGWH-SR 61
D+ S LPDE+L +LSFLPTK AV TS+LS RWK LW + L++D ++ ++G +R
Sbjct: 2 DKTSQLPDELLVKVLSFLPTKDAVRTSLLSMRWKSLWMWLPKLEYDFRHYSVSEGQGLAR 61
Query: 62 FVQSVHRVIHTPDFLQPIQKLRMSFVSRHSEVPSNVNVWVNAAVQRGGFEHVD--ICIYS 119
F+ ++ + H ++ + L++ + + S P ++ +WV+ AV + +C ++
Sbjct: 62 FI-TLSLLGHKAPAIESL-SLKLRYGAIGSIKPEDIYLWVSLAVHDSNVRELSLKLCTFA 119
Query: 120 LSPLNL-SSIFSCKTLVVLKLEGLDLNTTVSSVDLPFLKVLHLQVLQLSQRRCLAQLLNG 178
P L S++ CK++V+LKL+ L V LP LK L L + S L +LL+
Sbjct: 120 ERPTKLPKSLYKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDEDSLHRLLSN 179
Query: 179 CPVLEDLKAKAIYFKKYKETGFEYKTLSKL 208
CPVLEDL + + K+L +L
Sbjct: 180 CPVLEDLVVERDRIDNLGKLSVVVKSLQRL 209
Score = 95.5 bits (236), Expect = 2e-18
Identities = 79/217 (36%), Positives = 114/217 (52%), Gaps = 29/217 (13%)
Query: 2 EDRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDFDEANFR-------- 53
+D IS LPD ++C+ILSFLPTK A +T++L+KRWKPL + LDFDE +FR
Sbjct: 278 KDGISGLPDAMICHILSFLPTKVAASTTVLAKRWKPLLAFMPNLDFDE-SFRFDPRMTCE 336
Query: 54 -RTKGWHSRFVQSVHRVIHTPDFLQPIQKLRMSFVSRHSEVPSNVNVWVNAAVQRGGFEH 112
R KG S F+ V V+ + L +V ++V W+ ++RG +
Sbjct: 337 ERRKGSES-FMLVVDSVLALQ--AEANATLNKFYVKCEGVEQNSVLEWIPKVLKRGVLD- 392
Query: 113 VDICIYS---------LSPLNLSSIFSCKTLVVLKL---EGLDLNTTVSSVDLPFLKVLH 160
+D+ I S PL S IF KTLV LK+ +G ++N V LP LK LH
Sbjct: 393 IDLQIPSSRGFGSNSTFYPLP-SEIFVSKTLVRLKIQFQDGANVNVE-GDVSLPMLKTLH 450
Query: 161 LQVLQLSQRRCLAQLLNGCPVLEDLKAKAIYFKKYKE 197
L +++ R L +LL+GC LE+L + +K+ E
Sbjct: 451 LDYVKM-DTRMLQKLLSGCHTLEELLLMNLIWKESSE 486
>ref|NP_849271.1| F-box family protein [Arabidopsis thaliana]
Length = 441
Score = 106 bits (264), Expect = 9e-22
Identities = 70/210 (33%), Positives = 114/210 (53%), Gaps = 6/210 (2%)
Query: 3 DRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDFDEANFRRTKGWH-SR 61
D+ S LPDE+L +LSFLPTK AV TS+LS RWK LW + L++D ++ ++G +R
Sbjct: 2 DKTSQLPDELLVKVLSFLPTKDAVRTSLLSMRWKSLWMWLPKLEYDFRHYSVSEGQGLAR 61
Query: 62 FVQSVHRVIHTPDFLQPIQKLRMSFVSRHSEVPSNVNVWVNAAVQRGGFEHVD--ICIYS 119
F+ ++ + H ++ + L++ + + S P ++ +WV+ AV + +C ++
Sbjct: 62 FI-TLSLLGHKAPAIESL-SLKLRYGAIGSIKPEDIYLWVSLAVHDSNVRELSLKLCTFA 119
Query: 120 LSPLNL-SSIFSCKTLVVLKLEGLDLNTTVSSVDLPFLKVLHLQVLQLSQRRCLAQLLNG 178
P L S++ CK++V+LKL+ L V LP LK L L + S L +LL+
Sbjct: 120 ERPTKLPKSLYKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDEDSLHRLLSN 179
Query: 179 CPVLEDLKAKAIYFKKYKETGFEYKTLSKL 208
CPVLEDL + + K+L +L
Sbjct: 180 CPVLEDLVVERDRIDNLGKLSVVVKSLQRL 209
>gb|AAF79496.1| F20N2.9 [Arabidopsis thaliana]
Length = 526
Score = 105 bits (263), Expect = 1e-21
Identities = 69/187 (36%), Positives = 102/187 (53%), Gaps = 6/187 (3%)
Query: 3 DRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDFDEANFRRTKGWH-SR 61
D+IS LPDE+L +LSFL TK AV+TSILS RWK LW + L+++ ++ ++G +R
Sbjct: 87 DKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLEYNFRHYSVSEGQGLAR 146
Query: 62 FVQSVHRVIHTPDFLQPIQKLRMSFVSRHSEVPSNVNVWVNAAVQRGGFEHVDICIYSLS 121
F+ S RV P K R + S P ++ +WV+ AV + + +++ +
Sbjct: 147 FITSSLRVHKAPAIESLSLKFRYGAIG--SIKPKDIYLWVSLAVHVSNVRELSLKLFNFA 204
Query: 122 PLNL---SSIFSCKTLVVLKLEGLDLNTTVSSVDLPFLKVLHLQVLQLSQRRCLAQLLNG 178
L S+ CK++V+LKL+ L V LP LK L L + S L +LL+
Sbjct: 205 ELPTKLPKSLCKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDANSLHRLLSN 264
Query: 179 CPVLEDL 185
CPVLEDL
Sbjct: 265 CPVLEDL 271
>ref|NP_175962.1| F-box family protein [Arabidopsis thaliana]
Length = 492
Score = 105 bits (263), Expect = 1e-21
Identities = 69/187 (36%), Positives = 102/187 (53%), Gaps = 6/187 (3%)
Query: 3 DRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDFDEANFRRTKGWH-SR 61
D+IS LPDE+L +LSFL TK AV+TSILS RWK LW + L+++ ++ ++G +R
Sbjct: 53 DKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLEYNFRHYSVSEGQGLAR 112
Query: 62 FVQSVHRVIHTPDFLQPIQKLRMSFVSRHSEVPSNVNVWVNAAVQRGGFEHVDICIYSLS 121
F+ S RV P K R + S P ++ +WV+ AV + + +++ +
Sbjct: 113 FITSSLRVHKAPAIESLSLKFRYGAIG--SIKPKDIYLWVSLAVHVSNVRELSLKLFNFA 170
Query: 122 PLNL---SSIFSCKTLVVLKLEGLDLNTTVSSVDLPFLKVLHLQVLQLSQRRCLAQLLNG 178
L S+ CK++V+LKL+ L V LP LK L L + S L +LL+
Sbjct: 171 ELPTKLPKSLCKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDANSLHRLLSN 230
Query: 179 CPVLEDL 185
CPVLEDL
Sbjct: 231 CPVLEDL 237
>emb|CAB78115.1| hypothetical protein (probably remnant) [Arabidopsis thaliana]
gi|4538995|emb|CAB39616.1| hypothetical protein
(probably remnant) [Arabidopsis thaliana]
gi|7487738|pir||T03996 hypothetical protein T5L19.50 -
Arabidopsis thaliana
Length = 414
Score = 104 bits (259), Expect = 3e-21
Identities = 77/193 (39%), Positives = 108/193 (55%), Gaps = 22/193 (11%)
Query: 3 DRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDF-----DEANFRRTKG 57
DRI LPDE+L ILSF+PTK AV+TSILSKRW+ LW +T L F E+ F+R +
Sbjct: 2 DRIIGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSESEFKRLQC 61
Query: 58 WHSRFVQSVHRVIHTPDFLQPIQKLRMSFVSRHSEVPSNVNVWVNAAVQRGGFEHVDICI 117
+ R + +HR I+ R+ H + P ++ +WV AV R E + I
Sbjct: 62 FLDRNL-PLHRA-------PVIESFRLVLSDSHFK-PEDIRMWVVVAVSRYIRE---LKI 109
Query: 118 YS-----LSPLNLSSIFSCKTLVVLKLEGLDLNTTVSSVDLPFLKVLHLQVLQLSQRRCL 172
YS + SS+++CK+LV+LKL+G L V LP LK L L+ ++ ++ L
Sbjct: 110 YSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFKQGSL 169
Query: 173 AQLLNGCPVLEDL 185
+LL CPVLEDL
Sbjct: 170 QRLLCNCPVLEDL 182
>ref|NP_192730.2| F-box family protein [Arabidopsis thaliana]
Length = 316
Score = 104 bits (259), Expect = 3e-21
Identities = 77/193 (39%), Positives = 108/193 (55%), Gaps = 22/193 (11%)
Query: 3 DRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDF-----DEANFRRTKG 57
DRI LPDE+L ILSF+PTK AV+TSILSKRW+ LW +T L F E+ F+R +
Sbjct: 2 DRIIGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSESEFKRLQC 61
Query: 58 WHSRFVQSVHRVIHTPDFLQPIQKLRMSFVSRHSEVPSNVNVWVNAAVQRGGFEHVDICI 117
+ R + +HR I+ R+ H + P ++ +WV AV R E + I
Sbjct: 62 FLDRNL-PLHRA-------PVIESFRLVLSDSHFK-PEDIRMWVVVAVSRYIRE---LKI 109
Query: 118 YS-----LSPLNLSSIFSCKTLVVLKLEGLDLNTTVSSVDLPFLKVLHLQVLQLSQRRCL 172
YS + SS+++CK+LV+LKL+G L V LP LK L L+ ++ ++ L
Sbjct: 110 YSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFKQGSL 169
Query: 173 AQLLNGCPVLEDL 185
+LL CPVLEDL
Sbjct: 170 QRLLCNCPVLEDL 182
>ref|NP_193242.2| F-box protein-related [Arabidopsis thaliana]
Length = 572
Score = 103 bits (256), Expect = 7e-21
Identities = 81/272 (29%), Positives = 133/272 (48%), Gaps = 19/272 (6%)
Query: 3 DRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDFDEANFRRTKGWHSRF 62
D+IS LPD++L +L FLPTK AV+TSILSKRW+ LW + L++ N+ ++ R
Sbjct: 172 DKISRLPDDLLVKVLLFLPTKIAVSTSILSKRWEFLWMWLPKLEYHNTNYSASEEQRLRS 231
Query: 63 VQSVHRVIHTPDFLQPIQKLRMSFVSRHSEVPSNVNVWVNAAVQRGGFEHVDICIYSL-- 120
+++ +H I+ LR+ F S P N+ W+ AV R + I ++ L
Sbjct: 232 FINLNLQLHRAPI---IESLRLKFSLGRSIKPQNIKQWIIIAVFR-CVRELSINLFPLYC 287
Query: 121 --SPLNL-SSIFSCKTLVVLKLEGLDLNTTVSSVDLPFLKVLHLQVLQLSQRRCLAQLLN 177
+P L SS++ K+LV+LKL+ L LP LK L L+ + L QLL+
Sbjct: 288 IENPAKLPSSLYISKSLVILKLKDQILVDVPRMAYLPSLKYLLLKRVTYKDSNSLHQLLS 347
Query: 178 GCPVLEDLKAKAIYFKKYKETGFEYKTLSKLVRADISGTSTDLFRMEVINNVDFLRIHEI 237
CPVL++L + + + +L +L G S D E++ N L+ ++
Sbjct: 348 SCPVLKNLVVERDEYNHDETLSITVSSLQRLTLKISRGGSFD----ELVINTPSLKYFKL 403
Query: 238 YIRIPH------DDQFTDMFHNLTHIELGYYD 263
+ DD ++ +F ++ +E + D
Sbjct: 404 TDYLGECETELDDDSYSYVFKDMPKLEEAHID 435
>gb|AAQ22628.1| At5g38590/MBB18_14 [Arabidopsis thaliana]
gi|30693275|ref|NP_198675.2| F-box family protein
[Arabidopsis thaliana]
Length = 289
Score = 102 bits (253), Expect = 2e-20
Identities = 71/198 (35%), Positives = 109/198 (54%), Gaps = 11/198 (5%)
Query: 3 DRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDFDEANFRRTKGWHSRF 62
D+I+ LPD++L ILS++PT AV+TSILSKRW+ LW + LD+ R+ R
Sbjct: 2 DKINGLPDDLLVKILSYVPTDIAVSTSILSKRWEFLWMWLPNLDYTSRWCRKPGDVGLRD 61
Query: 63 VQSVHRVIHTPDFLQPIQKLRMSFVSRHSEV-PSNVNVWVNAAVQRGGFEHVDICIYSLS 121
+ +H ++ ++ F S ++ P ++ W+ AV R + +DI +S +
Sbjct: 62 FIHKNLPLHRAPVIESLR-----FHSNSPDIKPEDIRRWIEIAVSRHVHD-LDIDHFSEN 115
Query: 122 P-LNLSSIFSCKTLVVLKLEGLDLNTTVSSVDLPFLKVLHLQVLQLSQRRCLAQLLNGCP 180
+ LSS F+CK+LV LKL + L S V LP LK L L + + + L +LL+ CP
Sbjct: 116 ENIFLSSFFACKSLVTLKLRSVTLRDIPSMVCLPSLKTLLLDNVSFVEGKSLQELLSICP 175
Query: 181 VLEDLKAKAIYFKKYKET 198
VLEDL ++Y Y+ T
Sbjct: 176 VLEDL---SVYCDDYENT 190
>dbj|BAB10149.1| unnamed protein product [Arabidopsis thaliana]
gi|42573529|ref|NP_974861.1| F-box family protein
[Arabidopsis thaliana]
Length = 410
Score = 102 bits (253), Expect = 2e-20
Identities = 71/198 (35%), Positives = 109/198 (54%), Gaps = 11/198 (5%)
Query: 3 DRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDFDEANFRRTKGWHSRF 62
D+I+ LPD++L ILS++PT AV+TSILSKRW+ LW + LD+ R+ R
Sbjct: 2 DKINGLPDDLLVKILSYVPTDIAVSTSILSKRWEFLWMWLPNLDYTSRWCRKPGDVGLRD 61
Query: 63 VQSVHRVIHTPDFLQPIQKLRMSFVSRHSEV-PSNVNVWVNAAVQRGGFEHVDICIYSLS 121
+ +H ++ ++ F S ++ P ++ W+ AV R + +DI +S +
Sbjct: 62 FIHKNLPLHRAPVIESLR-----FHSNSPDIKPEDIRRWIEIAVSRHVHD-LDIDHFSEN 115
Query: 122 P-LNLSSIFSCKTLVVLKLEGLDLNTTVSSVDLPFLKVLHLQVLQLSQRRCLAQLLNGCP 180
+ LSS F+CK+LV LKL + L S V LP LK L L + + + L +LL+ CP
Sbjct: 116 ENIFLSSFFACKSLVTLKLRSVTLRDIPSMVCLPSLKTLLLDNVSFVEGKSLQELLSICP 175
Query: 181 VLEDLKAKAIYFKKYKET 198
VLEDL ++Y Y+ T
Sbjct: 176 VLEDL---SVYCDDYENT 190
>dbj|BAB11272.1| unnamed protein product [Arabidopsis thaliana]
gi|15241216|ref|NP_200455.1| F-box family protein
[Arabidopsis thaliana]
Length = 430
Score = 101 bits (251), Expect = 3e-20
Identities = 75/192 (39%), Positives = 110/192 (57%), Gaps = 20/192 (10%)
Query: 3 DRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDFDEANFRRTKGWH-SR 61
DRIS LPD+++ ILSF+PTK V+T++LSKRW+ LW+ V LD+ + + T+ W SR
Sbjct: 2 DRISLLPDDVVFKILSFVPTKVVVSTNLLSKRWRYLWKHVPKLDYRDPSLVDTEHWRASR 61
Query: 62 FVQSVHRVIHTPDFLQPIQKLRMSFVSRHSEVPSNVNVWVNAAVQRGGFE-HVDICIYSL 120
FV + P ++ L +S +SR+ PS++ W++ A+ R H+ I S
Sbjct: 62 FVDKFLLLHEAP----VLETLHLS-LSRNCP-PSDIETWISVAISRRVRNLHIYRYIPST 115
Query: 121 SPLNL-SSIFSCKTLVVLKLEGLDLNTTVSSVDLPF------LKVLHLQVLQLSQRRCLA 173
P+ L S+++C+TLV L L L+ TV D PF LKVL L + S +
Sbjct: 116 GPIRLPRSLYTCETLVSLYLL---LDFTVD--DAPFMFCFRSLKVLVLLFAKFSSDEIVN 170
Query: 174 QLLNGCPVLEDL 185
+LL+GCPVLE L
Sbjct: 171 RLLSGCPVLEGL 182
>emb|CAB91590.1| putative protein [Arabidopsis thaliana] gi|26450835|dbj|BAC42525.1|
unknown protein [Arabidopsis thaliana]
gi|29028916|gb|AAO64837.1| At3g59200 [Arabidopsis
thaliana] gi|15231646|ref|NP_191479.1| F-box family
protein [Arabidopsis thaliana] gi|11357652|pir||T48988
hypothetical protein F25L23.60 - Arabidopsis thaliana
Length = 520
Score = 100 bits (250), Expect = 4e-20
Identities = 80/215 (37%), Positives = 119/215 (55%), Gaps = 14/215 (6%)
Query: 3 DRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDFDEANFRRTK-----G 57
DRISSLP+ ++ +ILSFLPTK+A +TS+LSK+W+ L+ VT LDFD+++++ K
Sbjct: 7 DRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFDDSDYQDGKPKSDVE 66
Query: 58 WHSRFVQSVHRVIHTPDFLQPIQKLRMSFVSRHSEVPSNVNVWVNAAVQRGGFEHVDICI 117
F++ V RV+ + K + S + + V W+ + RG E +D+ I
Sbjct: 67 LSRSFMEFVDRVLALQG-NGSVNKFSLE-CSNYDVDLARVTGWILNVLGRGVSE-LDLSI 123
Query: 118 YSLSPLNLSSIFSCKTLVVLKL-EGLDLNTTVSSVD--LPFLKVLHLQVLQLSQRRC-LA 173
PL S IF KTLV LKL DL T+ D LP LK L++ + + +R
Sbjct: 124 LEY-PLP-SEIFVSKTLVRLKLGPANDLTLTLDRKDVFLPKLKTLYIDCVDVQERGFGFV 181
Query: 174 QLLNGCPVLEDLKAKAIYFKKYKETGFEYKTLSKL 208
+LL+GCPVLE+L I ++ +K KTL +L
Sbjct: 182 KLLSGCPVLEELVLMNIGWENWKFCSVSVKTLKRL 216
>ref|NP_173137.1| F-box family protein [Arabidopsis thaliana] gi|25518753|pir||H86304
hypothetical protein F6I1.6 - Arabidopsis thaliana
gi|9802769|gb|AAF99838.1| Hypothetical protein
[Arabidopsis thaliana]
Length = 449
Score = 100 bits (250), Expect = 4e-20
Identities = 70/196 (35%), Positives = 109/196 (54%), Gaps = 30/196 (15%)
Query: 3 DRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDFDEANFRRTKGWHSRF 62
DRIS+LPD +LC ILS L TK++V TS+LSKRW+ LW V LD D NF F
Sbjct: 15 DRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLDSNNFPD----DDVF 70
Query: 63 VQSVHRVIHTPDFLQPIQKLRMSF-VSRHSEVPSNVNVWVNAAVQRGGFEHVDICIYSL- 120
V V+R + + + Q +++ ++ + V+ H S W+NA ++R +C +++
Sbjct: 71 VSFVNRFLGSEN-EQHLERFKLIYEVNEHD--ASRFKSWINAVIKR------RVCHFNVH 121
Query: 121 -----------SPLNLSSIFSCKTLVVLKLEGLDLNTTVSSVDLPFLKVLHLQVLQLSQR 169
PL S++SC+ LV L+L + L+ SV LP +K++HL +++
Sbjct: 122 NEVDDDDELVKMPL---SLYSCERLVNLQLYRVALDHP-ESVSLPCVKIMHLDMVKYDAD 177
Query: 170 RCLAQLLNGCPVLEDL 185
L L++GCPVLE+L
Sbjct: 178 STLEILISGCPVLEEL 193
>emb|CAB80774.1| hypothetical protein [Arabidopsis thaliana]
gi|3193321|gb|AAC19303.1| F6N15.5 gene product
[Arabidopsis thaliana] gi|7486547|pir||T01344
hypothetical protein F6N15.5 - Arabidopsis thaliana
Length = 509
Score = 100 bits (249), Expect = 5e-20
Identities = 65/187 (34%), Positives = 99/187 (52%), Gaps = 7/187 (3%)
Query: 2 EDRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDFDEANFRRTKGWHSR 61
+DRIS LPD +L ILSFLPTK VATS+ SK+W+PLW+ V L+FD ++ + +
Sbjct: 61 KDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFDSEDYDDKEQYTFS 120
Query: 62 FVQSVHRVIHTPDFLQPIQKLRMSFVSRHSEVPSNVNVWVNAAVQRGGFEHVDICIYSLS 121
+ + H L + R+ F S + P ++ +WV A R E V + + +
Sbjct: 121 EIVCKSFLSHKAPVL---ESFRLEFESEKVD-PVDIGLWVGIAFSRHLRELVLVAADTGT 176
Query: 122 PLNL---SSIFSCKTLVVLKLEGLDLNTTVSSVDLPFLKVLHLQVLQLSQRRCLAQLLNG 178
SS+ +C TL L+L L L S V + L+ LHL+++ + LL+G
Sbjct: 177 GTAFKFPSSLCTCNTLETLRLVLLILVDISSPVVMKSLRTLHLELVSYKDESSIRNLLSG 236
Query: 179 CPVLEDL 185
CP+LE+L
Sbjct: 237 CPILEEL 243
>gb|AAM61661.1| unknown [Arabidopsis thaliana]
Length = 441
Score = 100 bits (249), Expect = 5e-20
Identities = 65/187 (34%), Positives = 99/187 (52%), Gaps = 7/187 (3%)
Query: 2 EDRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDFDEANFRRTKGWHSR 61
+DRIS LPD +L ILSFLPTK VATS+ SK+W+PLW+ V L+FD ++ + +
Sbjct: 3 KDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFDSEDYDDKEQYTFS 62
Query: 62 FVQSVHRVIHTPDFLQPIQKLRMSFVSRHSEVPSNVNVWVNAAVQRGGFEHVDICIYSLS 121
+ + H L + R+ F S + P ++ +WV A R E V + + +
Sbjct: 63 EIVCKSFLSHKAPVL---ESFRLEFESEKVD-PVDIGLWVGIAFSRHLRELVLVAADTGT 118
Query: 122 PLNL---SSIFSCKTLVVLKLEGLDLNTTVSSVDLPFLKVLHLQVLQLSQRRCLAQLLNG 178
SS+ +C TL L+L L L S V + L+ LHL+++ + LL+G
Sbjct: 119 GTAFKFPSSLCTCNTLETLRLVLLILVDISSPVVMKSLRTLHLELVSYKDESSIRNLLSG 178
Query: 179 CPVLEDL 185
CP+LE+L
Sbjct: 179 CPILEEL 185
>dbj|BAB11673.1| unnamed protein product [Arabidopsis thaliana]
gi|15242935|ref|NP_197659.1| F-box family protein
[Arabidopsis thaliana]
Length = 443
Score = 100 bits (249), Expect = 5e-20
Identities = 73/186 (39%), Positives = 105/186 (56%), Gaps = 10/186 (5%)
Query: 2 EDRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDFDEANFRRTKGWHSR 61
+D IS LPD++LC ILS LPTK AV TS+LSKRWK SV L+F+ + F G++
Sbjct: 10 QDSISLLPDDLLCRILSNLPTKVAVRTSVLSKRWKRFSLSVPLLEFNVSEFH---GYY-E 65
Query: 62 FVQSVHRVIHTPDFLQPIQKLRMSFVSRHSEVPSNVNVWVNAAVQRGGFEHVDICIYSLS 121
F + VH + T I KL+++F + + S + W++ AV+R +H+DI +S
Sbjct: 66 FARVVHGFLDT-SRETCIHKLKLAFEKKQHD-RSYLTQWIHNAVKR-KVQHLDIGRWSYL 122
Query: 122 PLNL--SSIFSCKTLVVLKLEGLDLNTTVSSVDLPFLKVLHLQVLQLSQRRCLAQLLNGC 179
L S+++C+TLV L+L + L V LP LK +HL L L++ C
Sbjct: 123 GQELIPHSLYTCETLVSLRLHNVSL-PDFDHVSLPRLKTMHLIDNIYPNDALLENLISSC 181
Query: 180 PVLEDL 185
PVLEDL
Sbjct: 182 PVLEDL 187
>ref|NP_567152.1| F-box family protein [Arabidopsis thaliana]
Length = 453
Score = 100 bits (249), Expect = 5e-20
Identities = 65/187 (34%), Positives = 99/187 (52%), Gaps = 7/187 (3%)
Query: 2 EDRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDFDEANFRRTKGWHSR 61
+DRIS LPD +L ILSFLPTK VATS+ SK+W+PLW+ V L+FD ++ + +
Sbjct: 15 KDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFDSEDYDDKEQYTFS 74
Query: 62 FVQSVHRVIHTPDFLQPIQKLRMSFVSRHSEVPSNVNVWVNAAVQRGGFEHVDICIYSLS 121
+ + H L + R+ F S + P ++ +WV A R E V + + +
Sbjct: 75 EIVCKSFLSHKAPVL---ESFRLEFESEKVD-PVDIGLWVGIAFSRHLRELVLVAADTGT 130
Query: 122 PLNL---SSIFSCKTLVVLKLEGLDLNTTVSSVDLPFLKVLHLQVLQLSQRRCLAQLLNG 178
SS+ +C TL L+L L L S V + L+ LHL+++ + LL+G
Sbjct: 131 GTAFKFPSSLCTCNTLETLRLVLLILVDISSPVVMKSLRTLHLELVSYKDESSIRNLLSG 190
Query: 179 CPVLEDL 185
CP+LE+L
Sbjct: 191 CPILEEL 197
>emb|CAB10188.1| hypothetical protein [Arabidopsis thaliana]
gi|7268114|emb|CAB78451.1| hypothetical protein
[Arabidopsis thaliana] gi|7485037|pir||B71402
hypothetical protein - Arabidopsis thaliana
Length = 1047
Score = 99.8 bits (247), Expect = 8e-20
Identities = 74/211 (35%), Positives = 106/211 (50%), Gaps = 26/211 (12%)
Query: 3 DRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDFDEANFRRTKGWHSRF 62
D ISSLPD+I +ILSFLPTK+A +TS+LSK+W+ L+ V LD D++
Sbjct: 694 DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDS------------ 741
Query: 63 VQSVHRVIHTPDFLQPIQKLRMSFVSRHSEVPSNVNVWVNAAVQRGGFE---HVDICIYS 119
V P+ I M FV R + + W+N ++RG + H+++
Sbjct: 742 ------VYLNPENETEISTSFMDFVDRVLALQVRIIPWINNVLERGVSDLDLHLNLESEF 795
Query: 120 LSPLNLSSIFSCKTLVVLKLE-GLDLNTTVSSVDLPFLKVLHLQVLQLSQRRC-LAQLLN 177
L P S ++ CKTLV LKL GL V V LP LK L+++ + L +LL+
Sbjct: 796 LLP---SQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVGLTKLLS 852
Query: 178 GCPVLEDLKAKAIYFKKYKETGFEYKTLSKL 208
GCP+LEDL I + + TL +L
Sbjct: 853 GCPMLEDLVLDDISWFIWDFASVSVPTLKRL 883
Score = 92.8 bits (229), Expect = 1e-17
Identities = 74/211 (35%), Positives = 105/211 (49%), Gaps = 10/211 (4%)
Query: 3 DRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDFDEA---NFRRTKGWH 59
D ISSLP+ I C+ILSFLPTK+A +TS+LSK+W+ L+ V LD DE+ N
Sbjct: 263 DIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVYLNPENETEVS 322
Query: 60 SRFVQSVHRVIHTPDFLQPIQKLRMSFVSRHSEVPSNVNVWVNAAVQRGGFEHVDICIYS 119
S F+ V RV+ P+ K + P + W+N ++R G +D+ +Y
Sbjct: 323 SSFMDFVDRVLALQG-NSPLHKFSLKI--GDGVEPDRIIPWINNVLER-GVSDLDLHVYM 378
Query: 120 LSPLNL-SSIFSCKTLVVLKLEGLDLNTTVSSVDLPFLKVLHLQVLQLSQRRC-LAQLLN 177
+ S +F KTLV LKL L V LP LK L++ + L +LL+
Sbjct: 379 ETEFVFPSEMFLSKTLVRLKLMLYPL-LEFEDVYLPKLKTLYIDSCYFEKYGIGLTKLLS 437
Query: 178 GCPVLEDLKAKAIYFKKYKETGFEYKTLSKL 208
GCP+LEDL I + + TL +L
Sbjct: 438 GCPILEDLVLDDIPWCTWDFASVSVPTLKRL 468
>gb|AAY78864.1| F-box family protein [Arabidopsis thaliana]
gi|18423560|ref|NP_568800.1| F-box family protein
(FBL13) [Arabidopsis thaliana]
Length = 444
Score = 99.4 bits (246), Expect = 1e-19
Identities = 68/186 (36%), Positives = 100/186 (53%), Gaps = 11/186 (5%)
Query: 2 EDRISSLPDEILCYILSFLPTKKAVATSILSKRWKPLWRSVTTLDFDEANFRRTKGWHSR 61
E+R+S LPD ++C ILS L TK AV TSILS RW+ LW+ V LDFD R + S
Sbjct: 17 EERLSQLPDHLICVILSHLSTKDAVRTSILSTRWRNLWQLVPVLDFDSRELRSFSEFVS- 75
Query: 62 FVQSVHRVIHTPDFLQPIQKLRMSFVSRHSEVPSNVNVWVNAAVQRGGFEHVDICIYSLS 121
F S +H + IQKLR+ + W++ V R +H+DI +++ S
Sbjct: 76 FAGSFF-YLHKDSY---IQKLRVCIYDLAGNY--YLTSWID-LVTRHRIQHIDISVFTCS 128
Query: 122 PLNL--SSIFSCKTLVVLKLEGLDLNTTVSSVDLPFLKVLHLQVLQLSQRRCLAQLLNGC 179
+ S+++C TLV LKL + + V V LP LK+L L + + L ++++
Sbjct: 129 GFGVIPLSLYTCDTLVHLKLSRVTM-VNVEFVSLPCLKILDLDFVNFTNETTLDKIISCS 187
Query: 180 PVLEDL 185
PVLE+L
Sbjct: 188 PVLEEL 193
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.325 0.139 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 467,184,693
Number of Sequences: 2540612
Number of extensions: 18136292
Number of successful extensions: 53103
Number of sequences better than 10.0: 520
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 52201
Number of HSP's gapped (non-prelim): 658
length of query: 289
length of database: 863,360,394
effective HSP length: 127
effective length of query: 162
effective length of database: 540,702,670
effective search space: 87593832540
effective search space used: 87593832540
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 74 (33.1 bits)
Lotus: description of TM0487.10