BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0476a.1
         (57 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAB10176.1| hypothetical protein [Arabidopsis thaliana] gi|7...    75  5e-13
ref|NP_193133.2| expressed protein [Arabidopsis thaliana]              75  5e-13
ref|XP_477155.1| hypothetical protein [Oryza sativa (japonica cu...    70  2e-11
dbj|BAD36475.1| SWIM zinc finger family protein-like [Oryza sati...    64  8e-10
gb|AAO11540.1| At1g60560/F8A5_10 [Arabidopsis thaliana] gi|19715...    62  4e-09
ref|NP_974054.1| SWIM zinc finger family protein [Arabidopsis th...    62  4e-09
gb|AAB71951.1| Hypothetical Protein [Arabidopsis thaliana] gi|25...    62  4e-09

>emb|CAB10176.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268101|emb|CAB78439.1| hypothetical protein
           [Arabidopsis thaliana] gi|7452413|pir||F71400
           hypothetical protein dl3025c - Arabidopsis thaliana
          Length = 675

 Score = 75.1 bits (183), Expect = 5e-13
 Identities = 38/56 (67%), Positives = 45/56 (79%)

Query: 1   RRRRVIYRSTHELDANDVVSISMWVESHLNCVFFYEDFSNSDPFILGIQTE*QLQR 56
           R  R I RST+ELD +D VSISMWVESH + VFF+E FS++DPF LGIQTE QLQ+
Sbjct: 163 RLERSIRRSTYELDEDDDVSISMWVESHQSHVFFFEGFSDTDPFSLGIQTEWQLQQ 218


>ref|NP_193133.2| expressed protein [Arabidopsis thaliana]
          Length = 663

 Score = 75.1 bits (183), Expect = 5e-13
 Identities = 38/56 (67%), Positives = 45/56 (79%)

Query: 1   RRRRVIYRSTHELDANDVVSISMWVESHLNCVFFYEDFSNSDPFILGIQTE*QLQR 56
           R  R I RST+ELD +D VSISMWVESH + VFF+E FS++DPF LGIQTE QLQ+
Sbjct: 163 RLERSIRRSTYELDEDDDVSISMWVESHQSHVFFFEGFSDTDPFSLGIQTEWQLQQ 218


>ref|XP_477155.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
           gi|34395362|dbj|BAC84431.1| hypothetical protein [Oryza
           sativa (japonica cultivar-group)]
          Length = 814

 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query: 1   RRRRVIYRSTHELDANDVVSISMWVESHLNCVFFYEDFSNSDPFILGIQTE*QLQR 56
           R  R I RS +ELD +D +SI++WVE+H N +F YEDFS+ D FI+GIQT+ QLQ+
Sbjct: 231 RLERKIRRSVYELDDDDAISINIWVENHQNHIFLYEDFSDKDTFIVGIQTDWQLQQ 286


>dbj|BAD36475.1| SWIM zinc finger family protein-like [Oryza sativa (japonica
           cultivar-group)] gi|51091487|dbj|BAD36226.1| SWIM zinc
           finger family protein-like [Oryza sativa (japonica
           cultivar-group)]
          Length = 729

 Score = 64.3 bits (155), Expect = 8e-10
 Identities = 29/52 (55%), Positives = 40/52 (76%)

Query: 5   VIYRSTHELDANDVVSISMWVESHLNCVFFYEDFSNSDPFILGIQTE*QLQR 56
           +I RSTHELD +D  SI MWV+ +   VF+Y+D +++D F+LGIQTE QLQ+
Sbjct: 242 IIKRSTHELDLDDQASIRMWVDRNKKSVFYYQDSTDTDAFVLGIQTEWQLQQ 293


>gb|AAO11540.1| At1g60560/F8A5_10 [Arabidopsis thaliana] gi|19715655|gb|AAL91647.1|
           At1g60560/F8A5_10 [Arabidopsis thaliana]
           gi|22330342|ref|NP_176256.2| SWIM zinc finger family
           protein [Arabidopsis thaliana]
          Length = 703

 Score = 62.0 bits (149), Expect = 4e-09
 Identities = 28/52 (53%), Positives = 38/52 (72%)

Query: 5   VIYRSTHELDANDVVSISMWVESHLNCVFFYEDFSNSDPFILGIQTE*QLQR 56
           +I RSTHELD +D  SI +W E +   +FFY++ S +D F+LGIQTE QLQ+
Sbjct: 234 IIKRSTHELDLDDQASIKIWAERNKKSIFFYQESSETDQFMLGIQTEWQLQQ 285


>ref|NP_974054.1| SWIM zinc finger family protein [Arabidopsis thaliana]
          Length = 500

 Score = 62.0 bits (149), Expect = 4e-09
 Identities = 28/52 (53%), Positives = 38/52 (72%)

Query: 5   VIYRSTHELDANDVVSISMWVESHLNCVFFYEDFSNSDPFILGIQTE*QLQR 56
           +I RSTHELD +D  SI +W E +   +FFY++ S +D F+LGIQTE QLQ+
Sbjct: 234 IIKRSTHELDLDDQASIKIWAERNKKSIFFYQESSETDQFMLGIQTEWQLQQ 285


>gb|AAB71951.1| Hypothetical Protein [Arabidopsis thaliana] gi|25404276|pir||H96630
           hypothetical protein F8A5.10 [imported] - Arabidopsis
           thaliana
          Length = 653

 Score = 62.0 bits (149), Expect = 4e-09
 Identities = 28/52 (53%), Positives = 38/52 (72%)

Query: 5   VIYRSTHELDANDVVSISMWVESHLNCVFFYEDFSNSDPFILGIQTE*QLQR 56
           +I RSTHELD +D  SI +W E +   +FFY++ S +D F+LGIQTE QLQ+
Sbjct: 234 IIKRSTHELDLDDQASIKIWAERNKKSIFFYQESSETDQFMLGIQTEWQLQQ 285


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.335    0.144    0.453 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,813,386
Number of Sequences: 2540612
Number of extensions: 2348271
Number of successful extensions: 7742
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7735
Number of HSP's gapped (non-prelim): 7
length of query: 57
length of database: 863,360,394
effective HSP length: 33
effective length of query: 24
effective length of database: 779,520,198
effective search space: 18708484752
effective search space used: 18708484752
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 68 (30.8 bits)