BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0438.5
(434 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB80676.1| putative SWI/SNF complex subunit SW13 [Arabidopsi... 417 e-115
gb|AAO50627.1| putative SWI/SNF complex subunit SW13 [Arabidopsi... 416 e-115
ref|XP_464442.1| putative SWIRM domain-containing protein [Oryza... 239 2e-61
gb|AAM10132.1| putative SWI/SNF family transcription activator [... 183 1e-44
gb|AAM14849.1| putative SWI/SNF family transcription activator [... 159 2e-37
emb|CAE05892.1| OSJNBa0044K18.33 [Oryza sativa (japonica cultiva... 155 2e-36
gb|AAM20094.1| unknown protein [Arabidopsis thaliana] gi|1837770... 151 3e-35
dbj|BAC41956.1| unknown protein [Arabidopsis thaliana] 151 3e-35
ref|NP_195169.3| DNA-binding family protein [Arabidopsis thaliana] 151 3e-35
ref|NP_974682.1| DNA-binding family protein [Arabidopsis thaliana] 151 3e-35
sp|Q8VY05|SMCL_ARATH Putative SWI/SNF-related matrix-associated ... 148 4e-34
ref|XP_418483.1| PREDICTED: similar to SWI/SNF-related matrix-as... 145 2e-33
emb|CAG89057.1| unnamed protein product [Debaryomyces hansenii C... 135 2e-30
gb|AAS52550.1| AEL135Cp [Ashbya gossypii ATCC 10895] gi|45190472... 132 3e-29
emb|CAB80160.1| putative protein [Arabidopsis thaliana] gi|44551... 107 7e-22
gb|EAK93748.1| hypothetical protein CaO19.4488 [Candida albicans... 105 2e-21
gb|EAK93714.1| hypothetical protein CaO19.11964 [Candida albican... 105 2e-21
gb|EAL20480.1| hypothetical protein CNBE4010 [Cryptococcus neofo... 102 2e-20
gb|EAK84762.1| hypothetical protein UM03856.1 [Ustilago maydis 5... 101 5e-20
emb|CAG78285.1| unnamed protein product [Yarrowia lipolytica CLI... 100 9e-20
>gb|AAB80676.1| putative SWI/SNF complex subunit SW13 [Arabidopsis thaliana]
gi|25408291|pir||F84747 probable SWI/SNF complex subunit
SW13 [imported] - Arabidopsis thaliana
Length = 432
Score = 417 bits (1071), Expect = e-115
Identities = 219/393 (55%), Positives = 288/393 (72%), Gaps = 18/393 (4%)
Query: 48 SATPDANVILVPSHSRWFSWDSIHQCEVRHLPEFFDS--SSKSPRVYKYYRNSIIKYFRY 105
S++ D + I VPS+S WFSW I+ CEVR LPEFFDS SSK+P+ Y Y RNSIIK +R
Sbjct: 40 SSSSDIDNIHVPSYSSWFSWTDINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRD 99
Query: 106 NPNRKITFTDVRKMLVGDVGSIRRVFEFLEAWGLINYHPSSSFSKPFKWDDKD---TKVD 162
+ RKI+FTDVR+ LV DV SIRRVF+FL++WGLINY+ S+S +KP KW++K+ + D
Sbjct: 100 DHPRKISFTDVRRTLVSDVVSIRRVFDFLDSWGLINYNSSAS-AKPLKWEEKEAGKSAGD 158
Query: 163 SAEPPPPPVRETAKRVCSGCKALCTIACFVCDKYDLTLCARCYVRGNYRVGVSSSDFKRV 222
+A P V+ETAKR C+GCKA+C+IACF CDKYDLTLCARCYVR NYRVG++SS+FKRV
Sbjct: 159 AASEPATTVKETAKRNCNGCKAICSIACFACDKYDLTLCARCYVRSNYRVGINSSEFKRV 218
Query: 223 EISEETKTEWTEKETLNLVEAISHYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQFLGS 282
EISEE+K EW++KE L L+EA+ HYGDDWK+V+ V+GRTEK+CV+ F+KLPFGEQF+
Sbjct: 219 EISEESKPEWSDKEILLLLEAVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQFVKE 278
Query: 283 AVSDDGCELKQHADESETVAS-------AESNKRMRLTPLADASNPIMAQAAFLSALAGP 335
+ S+DG E+ +S+ S + NKR++LTPLADASNPIMAQAAFLSALAG
Sbjct: 279 SDSEDGLEMFDQIKDSDIPESEGIDKDGSSPNKRIKLTPLADASNPIMAQAAFLSALAGT 338
Query: 336 EVAQAAAQAALTTLSDV-YKSTRINYRSLPKNTLQQDAGVASNGGNNSDSLQGARLNASL 394
VA+AAA+AA+ LSDV Y++ ++ ++ +QDA AS+G + + A +A
Sbjct: 339 NVAEAAARAAVRALSDVDYEAD----KNASRDPNRQDANAASSGETTRNESERAWADAKS 394
Query: 395 QLEKDESDVEKAISEIIEVQVCPILNCLMVFTL 427
+EK+E +VE AI E +EV+V L + F L
Sbjct: 395 LIEKEEHEVEGAIKETVEVEVSNNLQLSIDFLL 427
>gb|AAO50627.1| putative SWI/SNF complex subunit SW13 [Arabidopsis thaliana]
gi|28393376|gb|AAO42112.1| putative SWI/SNF complex
subunit SW13 [Arabidopsis thaliana]
gi|30685774|ref|NP_180919.2| SWIRM domain-containing
protein / DNA-binding family protein [Arabidopsis
thaliana]
Length = 469
Score = 416 bits (1070), Expect = e-115
Identities = 220/400 (55%), Positives = 292/400 (73%), Gaps = 23/400 (5%)
Query: 48 SATPDANVILVPSHSRWFSWDSIHQCEVRHLPEFFDS--SSKSPRVYKYYRNSIIKYFRY 105
S++ D + I VPS+S WFSW I+ CEVR LPEFFDS SSK+P+ Y Y RNSIIK +R
Sbjct: 40 SSSSDIDNIHVPSYSSWFSWTDINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRD 99
Query: 106 NPNRKITFTDVRKMLVGDVGSIRRVFEFLEAWGLINYHPSSSFSKPFKWDDKD---TKVD 162
+ RKI+FTDVR+ LV DV SIRRVF+FL++WGLINY+ S+S +KP KW++K+ + D
Sbjct: 100 DHPRKISFTDVRRTLVSDVVSIRRVFDFLDSWGLINYNSSAS-AKPLKWEEKEAGKSAGD 158
Query: 163 SAEPPPPPVRETAKRVCSGCKALCTIACFVCDKYDLTLCARCYVRGNYRVGVSSSDFKRV 222
+A P V+ETAKR C+GCKA+C+IACF CDKYDLTLCARCYVR NYRVG++SS+FKRV
Sbjct: 159 AASEPATTVKETAKRNCNGCKAICSIACFACDKYDLTLCARCYVRSNYRVGINSSEFKRV 218
Query: 223 EISEETKTEWTEKETLNLVEAISHYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQFLGS 282
EISEE+K EW++KE L L+EA+ HYGDDWK+V+ V+GRTEK+CV+ F+KLPFGEQF+
Sbjct: 219 EISEESKPEWSDKEILLLLEAVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQFVKE 278
Query: 283 AVSDDGCELKQHADESETVAS-------AESNKRMRLTPLADASNPIMAQAAFLSALAGP 335
+ S+DG E+ +S+ S + NKR++LTPLADASNPIMAQAAFLSALAG
Sbjct: 279 SDSEDGLEMFDQIKDSDIPESEGIDKDGSSPNKRIKLTPLADASNPIMAQAAFLSALAGT 338
Query: 336 EVAQAAAQAALTTLSDV-YKSTRINYRSLPKNTLQQDAGVASNGGNNSDSLQGARLNASL 394
VA+AAA+AA+ LSDV Y++ ++ ++ +QDA AS+G + + A +A
Sbjct: 339 NVAEAAARAAVRALSDVDYEAD----KNASRDPNRQDANAASSGETTRNESERAWADAKS 394
Query: 395 QLEKDESDVEKAISEIIEVQVCPILNCLMVFTLVKFKNLD 434
+EK+E +VE AI E +EV++ I + +V F+ LD
Sbjct: 395 LIEKEEHEVEGAIKETVEVEMKKIRD-----RIVHFEKLD 429
>ref|XP_464442.1| putative SWIRM domain-containing protein [Oryza sativa (japonica
cultivar-group)] gi|46389841|dbj|BAD15404.1| putative
SWIRM domain-containing protein [Oryza sativa (japonica
cultivar-group)]
Length = 302
Score = 239 bits (609), Expect = 2e-61
Identities = 117/239 (48%), Positives = 173/239 (71%), Gaps = 5/239 (2%)
Query: 177 RVCSGCKALCTIACFVCDKYDLTLCARCYVRGNYRVGVSSSDFKRVEISEETKTEWTEKE 236
++C+GC+ +C +A F C+K D++LCARCYVR NYR G++S+DFKR+EI+E+ K++WT+KE
Sbjct: 4 KLCTGCRTVCGLAYFSCEKADISLCARCYVRANYRPGLTSADFKRIEITEDAKSDWTDKE 63
Query: 237 TLNLVEAISHYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQFLGSAVSDDGCELKQHAD 296
TL+L+EA+ HYG+DWK+VSH V R+EK+C+A F +LPFGEQF+G +D + D
Sbjct: 64 TLHLLEAVLHYGEDWKKVSHHVGSRSEKDCIARFTRLPFGEQFMGP--KEDKIQFGNDCD 121
Query: 297 ESETVASAESNKRMRLTPLADASNPIMAQAAFLSALAGPEVAQAAAQAALTTLSDVYKST 356
+E + + +KR+RLTPLADASNPIMAQ AFLSA+ G +VA AA QAA++ S V S
Sbjct: 122 LNEE-SGSHISKRLRLTPLADASNPIMAQVAFLSAIVGSDVAVAAGQAAISAQSQVDISA 180
Query: 357 RINYRSLPKNTLQQDAGVASNGGNNSDSLQGARLNASLQLEKDESDVEKAISEIIEVQV 415
S+ N +++ +NG + +D L+ A NA +QLEK+ +E+++S+I+ VQ+
Sbjct: 181 SETDSSI--NISKEEESSCTNGLSANDLLKEASANAQVQLEKERKAIEQSLSDIVGVQM 237
>gb|AAM10132.1| putative SWI/SNF family transcription activator [Arabidopsis
thaliana] gi|17065436|gb|AAL32872.1| putative SWI/SNF
family transcription activator [Arabidopsis thaliana]
gi|30690734|ref|NP_850476.1| SWIRM domain-containing
protein / DNA-binding family protein [Arabidopsis
thaliana]
Length = 512
Score = 183 bits (464), Expect = 1e-44
Identities = 134/458 (29%), Positives = 211/458 (45%), Gaps = 101/458 (22%)
Query: 51 PDANVIL--VPSHSRWFSWDSIHQCEVRHLPEFFDSSS--KSPRVYKYYRNSIIKYFRYN 106
P A + L +P+ S WF WD IH+ E R EFF SS ++P+VYK YR+ II FR +
Sbjct: 6 PSAEIELYTIPAQSSWFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIINKFRED 65
Query: 107 PNRKITFTDVRKMLVGDVGSIRRVFEFLEAWGLINYHPSSSFSKPFKWDDKDTKVDSAE- 165
R++TFT VRK LVGDV +++VF FLE WGLIN FS K +D VD+A+
Sbjct: 66 TCRRLTFTSVRKFLVGDVNLLQKVFLFLEKWGLIN------FSSSLKKNDHLLSVDNAKI 119
Query: 166 --------------------PPPPPVRETAKR------------------------VCSG 181
PP V E + VC+
Sbjct: 120 EQGTPAGIRVTATPNSLRPITAPPLVEERVETGIKVPPLTSYSDVFSDLKKPDHVLVCAH 179
Query: 182 CKALCTIACFVCDKYDLTLCARCYVRGNYRVGVSSSDFKRVEISEETKTEWTEKETLNLV 241
C C + +K + +C +C+ GNY ++ DFK I WTE+E L L+
Sbjct: 180 CGERCDSPFYQHNKGIVNICEKCFKNGNYGENNTADDFKL--IGNSAAAVWTEEEILLLL 237
Query: 242 EAISHYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQFLGSA---------VSDDGCEL- 291
E++ +GDDW+ +S V ++ +C++ ++LPFGE +GSA D+ E
Sbjct: 238 ESVLKHGDDWELISQSVSTKSRLDCISKLIELPFGEFLMGSASGRLNPSILTEDENTEQV 297
Query: 292 ---KQHADESETVASAESN--------KRMRLTPLADASNPIMAQAAFLSALAGPEVAQA 340
Q +E+ET E KR R+ +++ + +M Q A +++ GP VA A
Sbjct: 298 QTDGQEHEETETREEKEDRVNEDEPPAKRKRVALISEGDSSLMKQVAAMASKVGPSVATA 357
Query: 341 AAQAALTTL------------SDVYKSTRINYRSLPKNTLQQDAGVASNG---------- 378
AA+AAL L +D Y + ++ + K+T ++ +G
Sbjct: 358 AAKAALAALCDEASCPKEIFDTDDYSNFTVDRANGEKDTDMEEQQEEKDGPQGLPVALRI 417
Query: 379 -GNNSDSLQGARLNASLQLEKDESDVEKAISEIIEVQV 415
+ + +L A A + +++E ++E+ + +IE Q+
Sbjct: 418 RASVATALGAAAAQAKILADQEEREMEQLAATVIEQQL 455
>gb|AAM14849.1| putative SWI/SNF family transcription activator [Arabidopsis
thaliana] gi|7487575|pir||T00422 probable SWI/SNF family
transcription activator [imported] - Arabidopsis
thaliana
Length = 435
Score = 159 bits (401), Expect = 2e-37
Identities = 113/363 (31%), Positives = 163/363 (44%), Gaps = 70/363 (19%)
Query: 51 PDANVIL--VPSHSRWFSWDSIHQCEVRHLPEFFDSSS--KSPRVYKYYRNSIIKYFRYN 106
P A + L +P+ S WF WD IH+ E R EFF SS ++P+VYK YR+ II FR +
Sbjct: 6 PSAEIELYTIPAQSSWFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIINKFRED 65
Query: 107 PNRKITFTDVRKMLVGDVGSIRRVFEFLEAWGLINYHPSSSFSKPFKWDDKDTKVDSAE- 165
R++TFT VRK LVGDV +++VF FLE WGLIN FS K +D VD+A+
Sbjct: 66 TCRRLTFTSVRKFLVGDVNLLQKVFLFLEKWGLIN------FSSSLKKNDHLLSVDNAKI 119
Query: 166 --------------------PPPPPVRETAKR------------------------VCSG 181
PP V E + VC+
Sbjct: 120 EQGTPAGIRVTATPNSLRPITAPPLVEERVETGIKVPPLTSYSDVFSDLKKPDHVLVCAH 179
Query: 182 CKALCTIACFVCDKYDLTLCARCYVRGNYRVGVSSSDFKRVEISEETKTEWTEKETLNLV 241
C C + +K + +C +C+ GNY ++ DFK I WTE+E L L+
Sbjct: 180 CGERCDSPFYQHNKGIVNICEKCFKNGNYGENNTADDFKL--IGNSAAAVWTEEEILLLL 237
Query: 242 EAISHYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQFLGSA---------VSDDGCEL- 291
E++ +GDDW+ +S V ++ +C++ ++LPFGE +GSA D+ E
Sbjct: 238 ESVLKHGDDWELISQSVSTKSRLDCISKLIELPFGEFLMGSASGRLNPSILTEDENTEQV 297
Query: 292 ---KQHADESETVASAESNKRMRLTPLADASNPIMAQAAFLSALAGPEVAQAAAQAALTT 348
Q +E+ET E P ++++ L A A AA A
Sbjct: 298 QTDGQEHEETETREEKEDRVNEDEPPAKRKRVALISEGDTLRIRASVATALGAAAAQAKI 357
Query: 349 LSD 351
L+D
Sbjct: 358 LAD 360
>emb|CAE05892.1| OSJNBa0044K18.33 [Oryza sativa (japonica cultivar-group)]
gi|50925205|ref|XP_472904.1| OSJNBa0044K18.33 [Oryza
sativa (japonica cultivar-group)]
Length = 891
Score = 155 bits (393), Expect = 2e-36
Identities = 122/461 (26%), Positives = 197/461 (42%), Gaps = 96/461 (20%)
Query: 39 DAPPSEPKLSATPDANVILVPSHSRWFSWDSIHQCEVRHLPEFFD--------SSSKSPR 90
D PP P + +P+ S WF WD IH+ E R LPEFF ++S++PR
Sbjct: 13 DGPPGRPP------RELYTIPASSGWFQWDEIHETERRALPEFFGGAGGSGFGTASRNPR 66
Query: 91 VYKYYRNSIIKYFRYNPNRKITFTDVRKMLVGDVGSIRRVFEFLEAWGLINYHPSSSFSK 150
+Y+ YR+ II +R + +R++TFT+VRK LVGDV +R++F FL++ GLIN+ S+S S+
Sbjct: 67 IYREYRDYIISRYREDTSRRLTFTEVRKALVGDVTLLRKLFAFLDSSGLINF--SASPSR 124
Query: 151 P-FKWDDKDTKVDSA-----------EPPP------------------PPVRETA----- 175
P + + T+ ++ PPP PP+ +
Sbjct: 125 PEAQQQQRQTEAEAVVEAPVGLQVTPRPPPSYFAEEKGGGGNENGFRLPPLTSYSDVFGE 184
Query: 176 -----KRVCSGCKALCTIACFVCDKYDLTLCARCYVRGNYR--VGVSSSDFKRVEISEET 228
+C C C K +C++CY + + + D K+ I +
Sbjct: 185 WAPGMAPICGLCGMECRDGNAQILKDGFKVCSKCYANNDNKGEANIHPGD-KKERIDNHS 243
Query: 229 KTEWTEKETLNLVEAISHYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQFLG------- 281
+ WT+ ETL L+E + +GDDW ++ V + + EC+A ++LPFGE LG
Sbjct: 244 SSAWTDAETLLLLEGVLKHGDDWDLIAQHVRTKNKSECIARLIQLPFGEHMLGTVNGKLD 303
Query: 282 ---------------SAVSD---------DGCELKQHADESETVASAESNKRMRLTPLAD 317
S V + D ++ + D ++ K RL D
Sbjct: 304 NRLHKIQTTDGKVNKSTVKESSSQPTETVDDMQIDGNEDGADKSVEEHPTKHRRLFSSID 363
Query: 318 ASNPIMAQAAFLSALAGPEVAQAAAQAALTTLSDVYKSTRINYRSLPKNTLQQDAGVASN 377
+ +M Q A L+ P+V AAA AA+ L + R ++ K Q +SN
Sbjct: 364 ITVSLMEQLAHLTTSTSPDVVAAAADAAIKALGNENPQARRAFQLSEKE--YQTRAFSSN 421
Query: 378 GGNN----SDSLQGARLNASLQLEKDESDVEKAISEIIEVQ 414
SD + G + + D+ + IS +V+
Sbjct: 422 HARQRDYCSDDVGGGDRDVEMHGHPDKKQGKMFISTTYQVR 462
>gb|AAM20094.1| unknown protein [Arabidopsis thaliana] gi|18377706|gb|AAL67003.1|
unknown protein [Arabidopsis thaliana]
gi|30690032|ref|NP_849564.1| DNA-binding family protein
[Arabidopsis thaliana] gi|30690027|ref|NP_849563.1|
DNA-binding family protein [Arabidopsis thaliana]
Length = 985
Score = 151 bits (382), Expect = 3e-35
Identities = 103/330 (31%), Positives = 157/330 (47%), Gaps = 61/330 (18%)
Query: 52 DANVILVPSHSRWFSWDSIHQCEVRHLPEFFDSS--SKSPRVYKYYRNSIIKYFRYNPNR 109
D+NV +VP+H WFSW+ IH E R LP FF+ ++ VY+ RN I+ F NPN
Sbjct: 141 DSNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNI 200
Query: 110 KITFTDVRKMLVGDVGSIRRVFEFLEAWGLINYHP------SSSFSKPFKWDDKDT---- 159
+I D+ ++ VGD + + V EFL+ WGLIN+HP S+ S DK++
Sbjct: 201 QIELKDLTELEVGDSEAKQEVMEFLDYWGLINFHPFPPTDTGSTASDHDDLGDKESLLNS 260
Query: 160 ----KVDSAEPP-------------------PPPVRETAKRV-------CSGCKALCTIA 189
+VD A PP P E K+ C+ C A C+
Sbjct: 261 LYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCNSCSADCSRK 320
Query: 190 CFVCDKY-DLTLCARCYVRGNYRVGVSSSDFKRVEISEET---KTEWTEKETLNLVEAIS 245
+ C K D LC C+ G + +SSSDF +E +E +WT++ETL L+EA+
Sbjct: 321 RYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVGSGKWTDQETLLLLEALE 380
Query: 246 HYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQFLGS--------------AVS-DDGCE 290
+ ++W ++ V +T+ +C+ HFL++P + FL AVS DD
Sbjct: 381 IFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKDPISKDTTDLAVSKDDNSV 440
Query: 291 LKQHADESETVASAESNKRMRLTPLADASN 320
LK +E+E + ++ M+ P + N
Sbjct: 441 LKDAPEEAENKKRVDEDETMKEVPEPEDGN 470
Score = 38.1 bits (87), Expect = 0.54
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 285 SDDGCELKQHADESETVASAESNKRMRLTPLADASNPIMAQAAFLSALAGPEVAQAAAQA 344
+D+ LK + E V + + + AD NP+M AAFL LAG +VA A+A+A
Sbjct: 512 ADENIALKALTEAFEDVGHSSTPEAS--FSFADLGNPVMGLAAFLVRLAGSDVATASARA 569
Query: 345 ALTTL 349
++ +L
Sbjct: 570 SIKSL 574
>dbj|BAC41956.1| unknown protein [Arabidopsis thaliana]
Length = 983
Score = 151 bits (382), Expect = 3e-35
Identities = 103/330 (31%), Positives = 157/330 (47%), Gaps = 61/330 (18%)
Query: 52 DANVILVPSHSRWFSWDSIHQCEVRHLPEFFDSS--SKSPRVYKYYRNSIIKYFRYNPNR 109
D+NV +VP+H WFSW+ IH E R LP FF+ ++ VY+ RN I+ F NPN
Sbjct: 141 DSNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNI 200
Query: 110 KITFTDVRKMLVGDVGSIRRVFEFLEAWGLINYHP------SSSFSKPFKWDDKDT---- 159
+I D+ ++ VGD + + V EFL+ WGLIN+HP S+ S DK++
Sbjct: 201 QIELKDLTELEVGDSEAKQEVMEFLDYWGLINFHPFPPTDTGSTASDHDDLGDKESLLNS 260
Query: 160 ----KVDSAEPP-------------------PPPVRETAKRV-------CSGCKALCTIA 189
+VD A PP P E K+ C+ C A C+
Sbjct: 261 LYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCNSCSADCSRK 320
Query: 190 CFVCDKY-DLTLCARCYVRGNYRVGVSSSDFKRVEISEET---KTEWTEKETLNLVEAIS 245
+ C K D LC C+ G + +SSSDF +E +E +WT++ETL L+EA+
Sbjct: 321 RYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVGSGKWTDQETLLLLEALE 380
Query: 246 HYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQFLGS--------------AVS-DDGCE 290
+ ++W ++ V +T+ +C+ HFL++P + FL AVS DD
Sbjct: 381 IFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKDPISKDTTDLAVSKDDNSV 440
Query: 291 LKQHADESETVASAESNKRMRLTPLADASN 320
LK +E+E + ++ M+ P + N
Sbjct: 441 LKDAPEEAENKKRVDEDETMKEVPEPEDGN 470
Score = 38.1 bits (87), Expect = 0.54
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 285 SDDGCELKQHADESETVASAESNKRMRLTPLADASNPIMAQAAFLSALAGPEVAQAAAQA 344
+D+ LK + E V + + + AD NP+M AAFL LAG +VA A+A+A
Sbjct: 512 ADENIALKALTEAFEDVGHSSTPEAS--FSFADLGNPVMGLAAFLVRLAGSDVATASARA 569
Query: 345 ALTTL 349
++ +L
Sbjct: 570 SIKSL 574
>ref|NP_195169.3| DNA-binding family protein [Arabidopsis thaliana]
Length = 983
Score = 151 bits (382), Expect = 3e-35
Identities = 103/330 (31%), Positives = 157/330 (47%), Gaps = 61/330 (18%)
Query: 52 DANVILVPSHSRWFSWDSIHQCEVRHLPEFFDSS--SKSPRVYKYYRNSIIKYFRYNPNR 109
D+NV +VP+H WFSW+ IH E R LP FF+ ++ VY+ RN I+ F NPN
Sbjct: 141 DSNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNI 200
Query: 110 KITFTDVRKMLVGDVGSIRRVFEFLEAWGLINYHP------SSSFSKPFKWDDKDT---- 159
+I D+ ++ VGD + + V EFL+ WGLIN+HP S+ S DK++
Sbjct: 201 QIELKDLTELEVGDSEAKQEVMEFLDYWGLINFHPFPPTDTGSTASDHDDLGDKESLLNS 260
Query: 160 ----KVDSAEPP-------------------PPPVRETAKRV-------CSGCKALCTIA 189
+VD A PP P E K+ C+ C A C+
Sbjct: 261 LYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCNSCSADCSRK 320
Query: 190 CFVCDKY-DLTLCARCYVRGNYRVGVSSSDFKRVEISEET---KTEWTEKETLNLVEAIS 245
+ C K D LC C+ G + +SSSDF +E +E +WT++ETL L+EA+
Sbjct: 321 RYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVGSGKWTDQETLLLLEALE 380
Query: 246 HYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQFLGS--------------AVS-DDGCE 290
+ ++W ++ V +T+ +C+ HFL++P + FL AVS DD
Sbjct: 381 IFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKDPISKDTTDLAVSKDDNSV 440
Query: 291 LKQHADESETVASAESNKRMRLTPLADASN 320
LK +E+E + ++ M+ P + N
Sbjct: 441 LKDAPEEAENKKRVDEDETMKEVPEPEDGN 470
Score = 38.5 bits (88), Expect = 0.41
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 285 SDDGCELKQHADESETVASAESNKRMRLTPLADASNPIMAQAAFLSALAGPEVAQAAAQA 344
+D+ LK + E V + + + AD NP+M AAFL LAG +VA A+A+A
Sbjct: 512 ADENIALKALTEAFEDVGHSSTPEAS--FSFADLGNPVMGLAAFLVRLAGSDVATASARA 569
Query: 345 ALTTL---SDVYKSTRINY--RSLPKNTLQQDAGVASNGGNNSDS 384
++ +L S + +TR Y P N +++ N D+
Sbjct: 570 SIKSLHSNSGMLLATRHCYILEDPPDNKKDPTKSKSADAEGNDDN 614
>ref|NP_974682.1| DNA-binding family protein [Arabidopsis thaliana]
Length = 986
Score = 151 bits (382), Expect = 3e-35
Identities = 103/330 (31%), Positives = 157/330 (47%), Gaps = 61/330 (18%)
Query: 52 DANVILVPSHSRWFSWDSIHQCEVRHLPEFFDSS--SKSPRVYKYYRNSIIKYFRYNPNR 109
D+NV +VP+H WFSW+ IH E R LP FF+ ++ VY+ RN I+ F NPN
Sbjct: 141 DSNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNI 200
Query: 110 KITFTDVRKMLVGDVGSIRRVFEFLEAWGLINYHP------SSSFSKPFKWDDKDT---- 159
+I D+ ++ VGD + + V EFL+ WGLIN+HP S+ S DK++
Sbjct: 201 QIELKDLTELEVGDSEAKQEVMEFLDYWGLINFHPFPPTDTGSTASDHDDLGDKESLLNS 260
Query: 160 ----KVDSAEPP-------------------PPPVRETAKRV-------CSGCKALCTIA 189
+VD A PP P E K+ C+ C A C+
Sbjct: 261 LYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCNSCSADCSRK 320
Query: 190 CFVCDKY-DLTLCARCYVRGNYRVGVSSSDFKRVEISEET---KTEWTEKETLNLVEAIS 245
+ C K D LC C+ G + +SSSDF +E +E +WT++ETL L+EA+
Sbjct: 321 RYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVGSGKWTDQETLLLLEALE 380
Query: 246 HYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQFLGS--------------AVS-DDGCE 290
+ ++W ++ V +T+ +C+ HFL++P + FL AVS DD
Sbjct: 381 IFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKDPISKDTTDLAVSKDDNSV 440
Query: 291 LKQHADESETVASAESNKRMRLTPLADASN 320
LK +E+E + ++ M+ P + N
Sbjct: 441 LKDAPEEAENKKRVDEDETMKEVPEPEDGN 470
Score = 38.1 bits (87), Expect = 0.54
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 285 SDDGCELKQHADESETVASAESNKRMRLTPLADASNPIMAQAAFLSALAGPEVAQAAAQA 344
+D+ LK + E V + + + AD NP+M AAFL LAG +VA A+A+A
Sbjct: 512 ADENIALKALTEAFEDVGHSSTPEAS--FSFADLGNPVMGLAAFLVRLAGSDVATASARA 569
Query: 345 ALTTL 349
++ +L
Sbjct: 570 SIKSL 574
>sp|Q8VY05|SMCL_ARATH Putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily C member (AtSwi3C)
Length = 985
Score = 148 bits (373), Expect = 4e-34
Identities = 102/330 (30%), Positives = 156/330 (46%), Gaps = 61/330 (18%)
Query: 52 DANVILVPSHSRWFSWDSIHQCEVRHLPEFFDSS--SKSPRVYKYYRNSIIKYFRYNPNR 109
D+NV +VP+H WFSW+ IH E R LP FF+ ++ VY+ RN I+ F NPN
Sbjct: 141 DSNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNI 200
Query: 110 KITFTDVRKMLVGDVGSIRRVFEFLEAWGLINYHP------SSSFSKPFKWDDKDT---- 159
+I D+ ++ VGD + + V EFL+ WGLIN+HP S+ S DK++
Sbjct: 201 QIELKDLTELEVGDSEAKQEVMEFLDYWGLINFHPFPPTDTGSTASDHDDLGDKESLLNS 260
Query: 160 ----KVDSAEPP-------------------PPPVRETAKRV-------CSGCKALCTIA 189
+VD A PP P E K+ C+ C A C+
Sbjct: 261 LYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCNSCSADCSRK 320
Query: 190 CFVCDKY-DLTLCARCYVRGNYRVGVSSSDFKRVEISEET---KTEWTEKETLNLVEAIS 245
+ C K D LC C+ G + +SSSD +E +E +WT++ETL L+EA+
Sbjct: 321 RYHCPKQADFDLCTECFNSGKFSSDMSSSDEILMEPAEAPGVGSGKWTDQETLLLLEALE 380
Query: 246 HYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQFLGS--------------AVS-DDGCE 290
+ ++W ++ V +T+ +C+ HFL++P + FL AVS DD
Sbjct: 381 IFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKDPISKDTTDLAVSKDDNSV 440
Query: 291 LKQHADESETVASAESNKRMRLTPLADASN 320
LK +E+E + ++ M+ P + N
Sbjct: 441 LKDAPEEAENKKRVDEDETMKEVPEPEDGN 470
Score = 38.1 bits (87), Expect = 0.54
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 285 SDDGCELKQHADESETVASAESNKRMRLTPLADASNPIMAQAAFLSALAGPEVAQAAAQA 344
+D+ LK + E V + + + AD NP+M AAFL LAG +VA A+A+A
Sbjct: 512 ADENIALKALTEAFEDVGHSSTPEAS--FSFADLGNPVMGLAAFLVRLAGSDVATASARA 569
Query: 345 ALTTL 349
++ +L
Sbjct: 570 SIKSL 574
>ref|XP_418483.1| PREDICTED: similar to SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin c1; mammalian
chromatin remodeling complex BRG1-associated factor 155;
SWI/SNF complex 155 kDa subunit; chromatin remodeling
complex BAF155 subunit ... [Gallus gallus]
Length = 2193
Score = 145 bits (367), Expect = 2e-33
Identities = 116/397 (29%), Positives = 171/397 (42%), Gaps = 89/397 (22%)
Query: 16 SSAGTPPPPLPPPPLHQPQ-PAKPDAPPS-EP-KLSATPDANVILVPSHSRWFSWDSIHQ 72
++ G PP P + + P K D S +P + + T N I++PS++ WF ++ IH
Sbjct: 954 ATGGKPPHHCVPSMTQEDEDPNKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCIHV 1013
Query: 73 CEVRHLPEFFD--SSSKSPRVYKYYRNSIIKYFRYNPNRKITFTDVRKMLVGDVGSIRRV 130
E R LPEFF+ + SK+P +Y YRN +I +R NP +T T R+ L GDV ++ RV
Sbjct: 1014 IERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRV 1073
Query: 131 FEFLEAWGLINYHPSSSFSKPFKWDDKDTKVDSAEPPPPP----------------VRET 174
FLE WGLINY D +++ + PPP P +R
Sbjct: 1074 HAFLEQWGLINYQV-----------DPESRPMAMGPPPTPHFNVLADTPSGLMPLHIRTP 1122
Query: 175 AKRVCSGCKALCTIACF----VCDKYDLTLCARCYVRGNYRVGVSSSDFKRVEISEETKT 230
+C + F V L C + N+R+ K + S+
Sbjct: 1123 RLMLCKDISVSHRVELFGWFCVLLNVCLKTCEKPTDLQNFRLRTDIYSKKTLTKSKGASA 1182
Query: 231 --EWTEKETLNLVE---------------------------------AISHYGDDWKRVS 255
EWTE+ETL L+E A+ Y DDW +VS
Sbjct: 1183 GREWTEQETLLLLEVSSWGRTEGRETEPCRVLHIKENGHAGLVVLLKALEMYKDDWNKVS 1242
Query: 256 HQVVGRTEKECVAHFLKLPFGEQFLGSAVSDDGCELKQHADESETVASAESNKRMRLTPL 315
V RT+ EC+ HFL+LP + +L ++ + G Q P
Sbjct: 1243 EHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQP------------------VPF 1284
Query: 316 ADASNPIMAQAAFLSALAGPEVAQAAAQAALTTLSDV 352
+ + NP+M+ AFL+++ P VA AAA+AAL S V
Sbjct: 1285 SQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRV 1321
>emb|CAG89057.1| unnamed protein product [Debaryomyces hansenii CBS767]
gi|50424261|ref|XP_460717.1| unnamed protein product
[Debaryomyces hansenii]
Length = 805
Score = 135 bits (341), Expect = 2e-30
Identities = 105/385 (27%), Positives = 175/385 (45%), Gaps = 52/385 (13%)
Query: 54 NVILVPSHSRWFSWDSIHQCEVRHLPEFFDSS--SKSPRVYKYYRNSIIKYFRYNPNRKI 111
+ I++PS+ WF+ IH+ E LPEFFD++ SKSP++Y YRN +I +R NPN +
Sbjct: 233 HAIILPSYCSWFNMSKIHKIEKESLPEFFDTTHPSKSPKIYINYRNFMINSYRLNPNEYL 292
Query: 112 TFTDVRKMLVGDVGSIRRVFEFLEAWGLINYHPSSSFSKPFKWDDKDTKVDSAEPPPPPV 171
T T R+ LVGDVG++ RV FL WGLINY + +F + + K+ + P
Sbjct: 293 TLTSCRRNLVGDVGTLMRVHRFLNKWGLINYQVNPNFKPGYALE----KLPNGSQIGLPY 348
Query: 172 RETAKRVCSGCKALCTIAC--FVCDKYDLTLCARC----YVRGNYRVGVSSSDFKRVEIS 225
+ L F D+ D++ + V SSD K V+
Sbjct: 349 TGNFHVTYDTPRGLFPFDTHKFNEDRVDVSKLKKLLNIEQVSDKPINNKMSSDAKNVDDL 408
Query: 226 EETKTE------------WTEKETLNLVEAISHYGDDWKRVSHQVVGRTEKECVAHFLKL 273
+ +E WT+KE L+ + + +DW ++S V +T +EC+ FLKL
Sbjct: 409 DTDSSEPPQKKHKSSKDGWTDKEISKLILGVKDFPNDWYKISKSVSTKTPQECILKFLKL 468
Query: 274 PFGEQFLGSAVSDDGCELKQHADESETVASAESNKRMRLTPLADASNPIMAQAAFLSALA 333
P + F D+ SN P++ NP+++ AF++ L
Sbjct: 469 PIEDNF------------NDLTDQELGFLKYSSN-----FPISSIDNPVISNLAFMTQLV 511
Query: 334 GPEVAQAAAQ--------AALTTLSDVY-KSTRINYRSLPKNTLQQDAGVASNGGNNSDS 384
+VA+AA++ AL + +VY ++ + S+ +N + + + + DS
Sbjct: 512 DSDVAKAASERACKVMDIKALEKIREVYGEADQTKADSVKQNEKKPEESEINK--DLDDS 569
Query: 385 LQGARLNASLQLEKDESDVEKAISE 409
+ + N S K ++D E +I +
Sbjct: 570 SENKQENESKFSPKKDTDTEMSIDD 594
>gb|AAS52550.1| AEL135Cp [Ashbya gossypii ATCC 10895] gi|45190472|ref|NP_984726.1|
AEL135Cp [Eremothecium gossypii]
Length = 635
Score = 132 bits (331), Expect = 3e-29
Identities = 92/332 (27%), Positives = 145/332 (42%), Gaps = 62/332 (18%)
Query: 51 PDANVILVPSHSRWFSWDSIHQCEVRHLPEFFDSS--SKSPRVYKYYRNSIIKYFRYNPN 108
P + I++PS+++WF + IH+ E + LPEFF + SK+P+VY YRN ++ +R NPN
Sbjct: 142 PQTHEIVIPSYAKWFHLNKIHEIEKKSLPEFFTNRIPSKTPQVYVKYRNFMVNSYRLNPN 201
Query: 109 RKITFTDVRKMLVGDVGSIRRVFEFLEAWGLINYHPSSSFSKPFKWDDKDTKVDSAEPPP 168
T T R+ L GD GSI RV++FL WGLINY +S K + EPP
Sbjct: 202 EYFTVTSARRNLCGDAGSIFRVYKFLSKWGLINYQVNSK-----------VKPTAVEPPY 250
Query: 169 PPVRETAKRVCSGC------KALCTIACFVCDKYDLTLCARCYVRGNYRV---------- 212
T G K I K +T GN +
Sbjct: 251 TGEYSTRHDAPRGLFPFQSYKPAVQIPDMSRLKKMMTQLRDPITGGNRQESSPSLKTEAG 310
Query: 213 ------------GVSSSDF---KRVEISEETKTEWTEKETLNLVEAISHYGDDWKRVSHQ 257
G+S+ K+ + + +W + E + L++++ +G DW +V+
Sbjct: 311 EEQAVDGKRMANGISTGHLRAPKKPRLQDMIDKDWEKGEVIKLLKSLQQHGTDWMQVAKD 370
Query: 258 VVGRTEKECVAHFLKLPFGEQFLGSAVSDDGCELKQHADESETVASAESNKRMRLTPLAD 317
V +T ++C+ FL+LP + FL D E + + + P +
Sbjct: 371 VGNKTPEQCILRFLQLPIEDNFL---------------DSEENLGPLKYGAHL---PFSK 412
Query: 318 ASNPIMAQAAFLSALAGPEVAQAAAQAALTTL 349
A NP+M+ AFL L E +A Q A+ ++
Sbjct: 413 ADNPVMSTIAFLVGLVDAETVRAMTQRAIKSI 444
>emb|CAB80160.1| putative protein [Arabidopsis thaliana] gi|4455188|emb|CAB36720.1|
putative protein [Arabidopsis thaliana]
Length = 827
Score = 107 bits (267), Expect = 7e-22
Identities = 80/277 (28%), Positives = 125/277 (44%), Gaps = 59/277 (21%)
Query: 103 FRYNPNRKITFTDVRKMLVGDVGSIRRVFEFLEAWGLINYHP------SSSFSKPFKWDD 156
F NPN +I D+ ++ VGD + + V EFL+ WGLIN+HP S+ S D
Sbjct: 4 FHSNPNIQIELKDLTELEVGDSEAKQEVMEFLDYWGLINFHPFPPTDTGSTASDHDDLGD 63
Query: 157 KDT--------KVDSAEPP-------------------PPPVRETAKRV-------CSGC 182
K++ +VD A PP P E K+ C+ C
Sbjct: 64 KESLLNSLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCNSC 123
Query: 183 KALCTIACFVCDKY-DLTLCARCYVRGNYRVGVSSSDFKRVEISEET---KTEWTEKETL 238
A C+ + C K D LC C+ G + +SSSDF +E +E +WT++ETL
Sbjct: 124 SADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVGSGKWTDQETL 183
Query: 239 NLVEAISHYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQFLGS--------------AV 284
L+EA+ + ++W ++ V +T+ +C+ HFL++P + FL AV
Sbjct: 184 LLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKDPISKDTTDLAV 243
Query: 285 S-DDGCELKQHADESETVASAESNKRMRLTPLADASN 320
S DD LK +E+E + ++ M+ P + N
Sbjct: 244 SKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGN 280
Score = 38.5 bits (88), Expect = 0.41
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 285 SDDGCELKQHADESETVASAESNKRMRLTPLADASNPIMAQAAFLSALAGPEVAQAAAQA 344
+D+ LK + E V + + + AD NP+M AAFL LAG +VA A+A+A
Sbjct: 322 ADENIALKALTEAFEDVGHSSTPEAS--FSFADLGNPVMGLAAFLVRLAGSDVATASARA 379
Query: 345 ALTTL---SDVYKSTRINY--RSLPKNTLQQDAGVASNGGNNSDS 384
++ +L S + +TR Y P N +++ N D+
Sbjct: 380 SIKSLHSNSGMLLATRHCYILEDPPDNKKDPTKSKSADAEGNDDN 424
>gb|EAK93748.1| hypothetical protein CaO19.4488 [Candida albicans SC5314]
Length = 971
Score = 105 bits (263), Expect = 2e-21
Identities = 54/115 (46%), Positives = 73/115 (62%), Gaps = 6/115 (5%)
Query: 37 KPDAPPSE-PKLSATPDANVILVPSHSRWFSWDSIHQCEVRHLPEFFDS--SSKSPRVYK 93
+P+ PP E P+ T ++I++PS++ WF+ IH+ E LPEFFDS SKSP++Y
Sbjct: 403 EPEEPPKEKPQYKQT---HLIVIPSYASWFNMKKIHKIEKESLPEFFDSIHPSKSPKLYV 459
Query: 94 YYRNSIIKYFRYNPNRKITFTDVRKMLVGDVGSIRRVFEFLEAWGLINYHPSSSF 148
YRN +I +R NPN +T T R+ LVGDVG++ RV FL WGLINY F
Sbjct: 460 NYRNFMINSYRLNPNEFLTLTSCRRNLVGDVGTLMRVHRFLNKWGLINYQVRPQF 514
Score = 62.8 bits (151), Expect = 2e-08
Identities = 41/160 (25%), Positives = 74/160 (45%), Gaps = 30/160 (18%)
Query: 232 WTEKETLNLVEAISHYGDDWKRVSHQVVG-RTEKECVAHFLKLPFGEQFLGSAVSDDGCE 290
WT+ E L+ A+ + +DW +++HQV G +T ++C+ FLKLP ++F
Sbjct: 633 WTKTEKDALISAVKTFKNDWYKIAHQVGGNKTPEQCILEFLKLPLEDKF----------- 681
Query: 291 LKQHADESETVASAESNKRMRLTPLADASNPIMAQAAFLSALAGPEVAQAAAQAALTTLS 350
DE ET + + K P++ NP++A F++ L VA+AA++AA +
Sbjct: 682 -NPINDEDET--NIKLLKYASNYPISSIDNPVLANLTFMTKLVDSNVAKAASEAAKKAMD 738
Query: 351 DVYKSTRINYRSLPKNTLQQDAGVASNGGNNSDSLQGARL 390
+ +++ NG NN++ G +
Sbjct: 739 E---------------SIENKVQEVYNGNNNTNGGNGGNV 763
>gb|EAK93714.1| hypothetical protein CaO19.11964 [Candida albicans SC5314]
Length = 1096
Score = 105 bits (263), Expect = 2e-21
Identities = 54/115 (46%), Positives = 73/115 (62%), Gaps = 6/115 (5%)
Query: 37 KPDAPPSE-PKLSATPDANVILVPSHSRWFSWDSIHQCEVRHLPEFFDS--SSKSPRVYK 93
+P+ PP E P+ T ++I++PS++ WF+ IH+ E LPEFFDS SKSP++Y
Sbjct: 528 EPEEPPKEKPQYKQT---HLIVIPSYASWFNMKKIHKIEKESLPEFFDSIHPSKSPKLYV 584
Query: 94 YYRNSIIKYFRYNPNRKITFTDVRKMLVGDVGSIRRVFEFLEAWGLINYHPSSSF 148
YRN +I +R NPN +T T R+ LVGDVG++ RV FL WGLINY F
Sbjct: 585 NYRNFMINSYRLNPNEFLTLTSCRRNLVGDVGTLMRVHRFLNKWGLINYQVRPQF 639
Score = 62.8 bits (151), Expect = 2e-08
Identities = 41/160 (25%), Positives = 74/160 (45%), Gaps = 30/160 (18%)
Query: 232 WTEKETLNLVEAISHYGDDWKRVSHQVVG-RTEKECVAHFLKLPFGEQFLGSAVSDDGCE 290
WT+ E L+ A+ + +DW +++HQV G +T ++C+ FLKLP ++F
Sbjct: 758 WTKTEKDALISAVKTFKNDWYKIAHQVGGNKTPEQCILEFLKLPLEDKF----------- 806
Query: 291 LKQHADESETVASAESNKRMRLTPLADASNPIMAQAAFLSALAGPEVAQAAAQAALTTLS 350
DE ET + + K P++ NP++A F++ L VA+AA++AA +
Sbjct: 807 -NPINDEDET--NIKLLKYASNYPISSIDNPVLANLTFMTKLVDSNVAKAASEAAKKAMD 863
Query: 351 DVYKSTRINYRSLPKNTLQQDAGVASNGGNNSDSLQGARL 390
+ +++ NG NN++ G +
Sbjct: 864 E---------------SIENKVQEVYNGNNNTNGGNGGNV 888
>gb|EAL20480.1| hypothetical protein CNBE4010 [Cryptococcus neoformans var.
neoformans B-3501A] gi|57227286|gb|AAW43745.1| chromatin
remodeling-related protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
gi|58267792|ref|XP_571052.1| chromatin
remodeling-related protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 684
Score = 102 bits (255), Expect = 2e-20
Identities = 62/158 (39%), Positives = 84/158 (52%), Gaps = 16/158 (10%)
Query: 12 PPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATPDANVILVPSHSRWFSWDSIH 71
P +++ TP P P +P PA+ + + T + +++PS+S WFS +IH
Sbjct: 70 PRDAAATETPAEETPAPEPERPTPAQLHDLATTYLAAQT---HPLVIPSYSSWFSLTTIH 126
Query: 72 QCEVRHLPEFFDSS--SKSPRVYKYYRNSIIKYFRYNPNRKITFTDVRKMLVGDVGSIRR 129
E R LPEFF S SK+P VYK YR+ +I +R NP +T T R+ L GDVG+I R
Sbjct: 127 PIERRSLPEFFSSRNRSKTPSVYKDYRDFMINTYRLNPGEYLTVTACRRNLAGDVGAIMR 186
Query: 130 VFEFLEAWGLINYHPSSSFSKPFKWDDKDTKVDSAEPP 167
V FLE WGLINY D DT+ + PP
Sbjct: 187 VHAFLEQWGLINYQV-----------DPDTRPAALGPP 213
Score = 100 bits (248), Expect = 1e-19
Identities = 79/271 (29%), Positives = 124/271 (45%), Gaps = 38/271 (14%)
Query: 142 YHPSSSFSKPFKWDDKDTKVDSAEPPPPPVRETAKRVCSGCKALCTIACFVCDKY-DLTL 200
YH + +KP +D TK+ S P ++ VC C CT + K + T+
Sbjct: 263 YHSTPRTTKPVSAEDA-TKLASTNGDVP---KSKTYVCETCGTDCTTTRYHSLKDGEYTI 318
Query: 201 CARCYVRGNYRVGVSSSDFKRVE------ISEETKTEWTEKETLNLVEAISHYGDDWKRV 254
C C+V G + + S DF R++ S +W+++ETL L+E I + DDW+ V
Sbjct: 319 CPSCFVSGRFPSTMYSGDFVRLDEEAFKHASASVGADWSDQETLLLLEGIEMFDDDWQAV 378
Query: 255 SHQVVGRTEKECVAHFLKLPFGEQFLGSAVSDDGCELKQHADESETVASAESNKRMRLTP 314
+ V R+++ C++ FL+LP + +L + D L+ A M P
Sbjct: 379 ADHVGSRSKESCISKFLQLPIEDPYLTQEPAADLGPLRYQAG-------------MNGLP 425
Query: 315 LADASNPIMAQAAFLSALAGPEVAQAAAQAALTTLSDVYKSTRINYRSLPKNTLQQDAGV 374
NP+M+ AFL++ GP VA AAAQ+AL L+ K RS + +++ V
Sbjct: 426 FEGGENPVMSVVAFLASQVGPAVAAAAAQSALGELAKGLK----RKRSEGEKEGEKEGKV 481
Query: 375 ASNGGNNSDSLQGARLNASLQLEKDESDVEK 405
A N +S + +K ESD EK
Sbjct: 482 AKNDEEKKESDE----------KKKESDEEK 502
>gb|EAK84762.1| hypothetical protein UM03856.1 [Ustilago maydis 521]
gi|49074712|ref|XP_401471.1| hypothetical protein
UM03856.1 [Ustilago maydis 521]
Length = 1049
Score = 101 bits (251), Expect = 5e-20
Identities = 69/216 (31%), Positives = 106/216 (48%), Gaps = 22/216 (10%)
Query: 179 CSGCKALCTIACFVCDKY-DLTLCARCYVRGNYRVGVSSSDFKRVEISEETKT------- 230
C C + CT + K + +LCA CY+ G + + S DF R+E S +T
Sbjct: 652 CDTCGSDCTRVRYHSIKAKNYSLCASCYLEGRFPSSMYSGDFVRMEDSVLKQTGGVVGGA 711
Query: 231 -----EWTEKETLNLVEAISHYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQFL-GSAV 284
+WT+ ETL L+E + + DDW VS+ V R+ ++C+ F++LP + FL G++
Sbjct: 712 SGGQDDWTDAETLRLLEGLEMFDDDWSAVSNHVGTRSREQCITKFIQLPIEDGFLDGASQ 771
Query: 285 SDDGCELKQHADESETVASAESNKRMRLTPLADASNPIMAQAAFLSALAGPEVAQAAAQA 344
+D G D+ + + + P A A NP+M+ AFL++ P VA AAAQ+
Sbjct: 772 ADLGPLQYARRDQVDKLGKP-------IVPFAQADNPVMSVVAFLASAVNPAVAAAAAQS 824
Query: 345 ALTTLSD-VYKSTRINYRSLPKNTLQQDAGVASNGG 379
AL L++ + K S K DAG A G
Sbjct: 825 ALGELTENLRKRAGREKSSGEKEATAADAGDAKRDG 860
Score = 94.7 bits (234), Expect = 5e-18
Identities = 57/136 (41%), Positives = 77/136 (55%), Gaps = 4/136 (2%)
Query: 9 ATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATPDANVILVPSHSRWFSWD 68
A E P ++A T P + P Q + A K A+ VI +PS+S WF
Sbjct: 400 AVEEPTEATADTNAPIVQPDAAAVEQQ-RIRAEEIAKKYLASQTQEVI-IPSYSTWFDMS 457
Query: 69 SIHQCEVRHLPEFFD--SSSKSPRVYKYYRNSIIKYFRYNPNRKITFTDVRKMLVGDVGS 126
+I+ E R LPEFF+ + SK+P +YK YR+ +I +R NP+ +TFT R+ L GDV +
Sbjct: 458 TINAIEKRSLPEFFNHKNRSKTPSIYKDYRDFMINTYRLNPSEYLTFTACRRNLAGDVCA 517
Query: 127 IRRVFEFLEAWGLINY 142
I RV FLE WGLINY
Sbjct: 518 IMRVHAFLEQWGLINY 533
>emb|CAG78285.1| unnamed protein product [Yarrowia lipolytica CLIB99]
gi|50556136|ref|XP_505476.1| hypothetical protein
[Yarrowia lipolytica]
Length = 857
Score = 100 bits (249), Expect = 9e-20
Identities = 55/135 (40%), Positives = 79/135 (57%), Gaps = 13/135 (9%)
Query: 10 TEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATPDANVILVPSHSRWFSWDS 69
T P P + PPP+ P+ A PD P A+ I++PS++ WF+ +
Sbjct: 262 TAIPDDQKLKETKPVVAPPPV--PRNAVPDY---------IPQAHTIVIPSYASWFNVNR 310
Query: 70 IHQCEVRHLPEFFD--SSSKSPRVYKYYRNSIIKYFRYNPNRKITFTDVRKMLVGDVGSI 127
IH E + +PEFF+ ++SK+P VYK YR +I +R +P +T T VR+ L+GDV +I
Sbjct: 311 IHSIEKKSIPEFFNQRNNSKTPEVYKRYRAFMINTYRLHPTEYLTVTAVRRNLLGDVCAI 370
Query: 128 RRVFEFLEAWGLINY 142
RV +FLE WGLINY
Sbjct: 371 MRVHQFLEKWGLINY 385
Score = 60.8 bits (146), Expect = 8e-08
Identities = 43/193 (22%), Positives = 79/193 (40%), Gaps = 18/193 (9%)
Query: 221 RVEISEETKTEWTEKETLNLVEAISHYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQFL 280
+VE ++ EWT++E NL+ I +G+DW +S V +T ++C+ F+ L +++L
Sbjct: 494 QVEPFVQSDPEWTKREVYNLLNGIEEHGNDWTAISETVGNKTREQCLLKFISLSTEDKYL 553
Query: 281 GSAVSDDGCELKQHADESETVASAESNKRMRLTPLADASNPIMAQAAFLSALAGPEVAQA 340
G + Q S S + P NP+++ +FL+ L P V A
Sbjct: 554 GKSGDVSASTSGQDIKVSPLQVSP------KYLPFDHVDNPVLSVVSFLTGLVDPTVVSA 607
Query: 341 AAQAALTTLSDVYKSTRINYRSLPKNTL--------QQDAGVASNGGNNSDSLQGARLNA 392
+ ++ K+ ++ K L Q+ + + DS G
Sbjct: 608 MTGRG---VEEIRKTLKLEMTEQKKQQLLERRRKREQEKKDKEAAAAKDGDSKDGGEKEG 664
Query: 393 SLQLEKDESDVEK 405
+ +KD+ D K
Sbjct: 665 G-EGDKDDKDAVK 676
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.315 0.131 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 797,284,149
Number of Sequences: 2540612
Number of extensions: 36948371
Number of successful extensions: 582402
Number of sequences better than 10.0: 4682
Number of HSP's better than 10.0 without gapping: 2498
Number of HSP's successfully gapped in prelim test: 2487
Number of HSP's that attempted gapping in prelim test: 433584
Number of HSP's gapped (non-prelim): 63331
length of query: 434
length of database: 863,360,394
effective HSP length: 131
effective length of query: 303
effective length of database: 530,540,222
effective search space: 160753687266
effective search space used: 160753687266
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)
Lotus: description of TM0438.5