BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0388a.4
(1489 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC44142.1| putative polyprotein [Cicer arietinum] 1011 0.0
gb|AAP52384.1| putative retroelement [Oryza sativa (japonica cul... 847 0.0
gb|AAV31377.1| putative polyprotein [Oryza sativa (japonica cult... 847 0.0
gb|AAP52378.1| putative retroelement [Oryza sativa (japonica cul... 845 0.0
gb|AAO45752.1| pol protein [Cucumis melo] 842 0.0
gb|AAU10772.1| putative polyprotein [Oryza sativa (japonica cult... 837 0.0
gb|AAT66771.1| putative polyprotein [Solanum demissum] 836 0.0
gb|AAP52863.1| putative retroelement [Oryza sativa (japonica cul... 835 0.0
ref|XP_476280.1| putative polyprotein [Oryza sativa (japonica cu... 834 0.0
ref|NP_917371.1| Putative polyprotein [Oryza sativa (japonica cu... 834 0.0
gb|AAP52480.1| putative polyprotein [Oryza sativa (japonica cult... 833 0.0
gb|AAP52185.1| putative polyprotein [Oryza sativa (japonica cult... 833 0.0
gb|AAP52586.1| putative polyprotein [Oryza sativa (japonica cult... 833 0.0
emb|CAE02978.3| OSJNBa0086B14.15 [Oryza sativa (japonica cultiva... 833 0.0
gb|AAP52970.1| putative retroelement [Oryza sativa (japonica cul... 833 0.0
gb|AAP52680.1| putative polyprotein [Oryza sativa (japonica cult... 832 0.0
gb|AAP52558.1| putative polyprotein [Oryza sativa (japonica cult... 832 0.0
gb|AAP52470.1| putative polyprotein [Oryza sativa (japonica cult... 832 0.0
ref|NP_914275.1| putative polyprotein [Oryza sativa (japonica cu... 832 0.0
gb|AAV25053.1| putative polyprotein [Oryza sativa (japonica cult... 832 0.0
>emb|CAC44142.1| putative polyprotein [Cicer arietinum]
Length = 655
Score = 1011 bits (2614), Expect = 0.0
Identities = 472/656 (71%), Positives = 573/656 (86%), Gaps = 2/656 (0%)
Query: 733 ELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFVGLAGYY 792
+LYAN SKCEFW+E+V FLGHVI+ +G+AVDP+KIE++++W+QP+ +DIRS VGLAGYY
Sbjct: 1 QLYANLSKCEFWLEKVNFLGHVITKEGIAVDPAKIEAVLAWKQPQTVTDIRSLVGLAGYY 60
Query: 793 RRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGEPYDVYC 852
RRF++ +AK+ +PLTQLT+K+QPFAWTEKCEE+FQ +K++LTT+ +L LP+ EP++VYC
Sbjct: 61 RRFIEGFAKIVAPLTQLTRKDQPFAWTEKCEENFQLLKRKLTTSPVLVLPQSEEPHEVYC 120
Query: 853 DASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLYGSMFTI 912
DASH GLGCV+MQ KKV+AYASRQLKIHE+NYPTHDLELAA+V+ALKIWRHYLYG FT+
Sbjct: 121 DASHQGLGCVLMQHKKVVAYASRQLKIHERNYPTHDLELAAVVFALKIWRHYLYGCTFTV 180
Query: 913 YSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAMHVSSL-M 971
+SDHKSLKYLFDQK+LNMRQRRW+E L+D++F LQ HPGK NVVADALSR+++ VSSL M
Sbjct: 181 FSDHKSLKYLFDQKELNMRQRRWIETLKDFDFTLQYHPGKANVVADALSRRSVSVSSLIM 240
Query: 972 VKELELLEAF*DLSLDVKIAPGKLSFGMVTVSSGLLDEIKSKQETDEGLLEWRKLVTQGK 1031
++ EL EAF DL L+V+ APG L FGM+ +SSGLL++I + Q+ D + E R L+ QGK
Sbjct: 241 ARQQELWEAFRDLHLNVEFAPGILKFGMIKISSGLLEDIANSQD-DVLIQEKRNLIVQGK 299
Query: 1032 APEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQDLKLHFWWPG 1091
EF IG+DN+LRC GR+CVP MR+ IL+E HKS+LSIHPG KMYQDL+ ++WWPG
Sbjct: 300 TTEFKIGADNVLRCNGRICVPEITAMRKTILEEAHKSKLSIHPGATKMYQDLRQNYWWPG 359
Query: 1092 MKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTALPLTRRRFDAI 1151
MKK VAEYVSTCLTC AKVEHQ+PAG LQ LD+PEWKWDSISMDF+T LP TRR+ D+I
Sbjct: 360 MKKHVAEYVSTCLTCQKAKVEHQRPAGMLQPLDIPEWKWDSISMDFITGLPKTRRKNDSI 419
Query: 1152 WVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSRFTSRFWGALQ 1211
WV+VDRLTK+AHF+P+ YKV++L EI+IA+IVRLHGVPSSIVSDRD +FTS FWGAL
Sbjct: 420 WVIVDRLTKSAHFLPVRTTYKVDQLTEIYIAEIVRLHGVPSSIVSDRDPKFTSHFWGALH 479
Query: 1212 QALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLIEFTYNNSFHA 1271
+ALGTKLRLSSAY+PQTDGQTERT QSLEDLLRACVLD +GSWD +LPLIEFTYNNSFH
Sbjct: 480 EALGTKLRLSSAYHPQTDGQTERTNQSLEDLLRACVLDDRGSWDHVLPLIEFTYNNSFHT 539
Query: 1272 SIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMRIS*SRQKSYA 1331
SIGMAPY+ALYGR+CQTPLCW++DGE++++GPE+VQQTT +VK+I+EKM+ S RQKSYA
Sbjct: 540 SIGMAPYQALYGRKCQTPLCWYKDGENMIVGPEMVQQTTAKVKKIKEKMKTSQDRQKSYA 599
Query: 1332 DNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGPVAYRIA 1387
D RR+ LEF+ GDHVFLRVTP TGVGRA+KSKKLTPKFIGPYQI R+GPVAYRIA
Sbjct: 600 DKRRRLLEFEQGDHVFLRVTPTTGVGRALKSKKLTPKFIGPYQIYARIGPVAYRIA 655
>gb|AAP52384.1| putative retroelement [Oryza sativa (japonica cultivar-group)]
gi|37531590|ref|NP_920097.1| putative retroelement [Oryza
sativa (japonica cultivar-group)]
gi|19881768|gb|AAM01169.1| Putative retroelement [Oryza
sativa (japonica cultivar-group)]
Length = 1449
Score = 847 bits (2188), Expect = 0.0
Identities = 412/766 (53%), Positives = 548/766 (70%), Gaps = 11/766 (1%)
Query: 727 EYCKGKELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFV 786
E + +LYA SKCEFW+ EVKFLGHVISS GVAVDPS +ES++SW+QPK S++RSF+
Sbjct: 687 EKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLSWKQPKTVSEVRSFL 746
Query: 787 GLAGYYRRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGE 846
GLAGYYRRF+++++K+ P+T+L +K + WTE CE+SFQE+KKRL TA +L LP +
Sbjct: 747 GLAGYYRRFIENFSKIARPMTRLLQKEVKYKWTEDCEQSFQELKKRLVTAPVLILPDSRK 806
Query: 847 PYDVYCDASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLY 906
+ VYCDAS GLGCV+MQE KV+AYASRQL+ HE NYPTHDLELAA+V+ALKIWRHYLY
Sbjct: 807 GFQVYCDASRLGLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHALKIWRHYLY 866
Query: 907 GSMFTIYSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAM- 965
G+ +Y+DHKSLKY+F Q DLNMRQRRW+E ++DY+ ++ HPGK NVVADALSRK+
Sbjct: 867 GNRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVADALSRKSYC 926
Query: 966 HVSSLMVKELELLEAF*DLSLDVKIAPGKLSFGMVTVSSG---LLDEIKSKQETDEGLLE 1022
++S EL + F L+L G +S G V L D+I+ Q D + E
Sbjct: 927 NMSEGRCLPWELCQEFEKLNL------GIVSKGFVAALEAKPTLFDQIREAQVNDPYIQE 980
Query: 1023 WRKLVTQGKAPEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQD 1082
+K + +GKA F + R+CVP + ++ I+ E H++ SIHPG KMYQD
Sbjct: 981 IKKNMRRGKAIGFVEDEQGTVWLGERICVPENKELKDTIMKEAHETLYSIHPGSTKMYQD 1040
Query: 1083 LKLHFWWPGMKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTALP 1142
LK FWW M++++AEYV+ C C K EHQKPAG LQ L +PEWKW+ I MDF+T LP
Sbjct: 1041 LKQQFWWASMRREIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLP 1100
Query: 1143 LTRRRFDAIWVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSRF 1202
T D+IWVVVDRLTK AHF+P+ Y KLAE+++A++V LHGVP IVSDR S+F
Sbjct: 1101 RTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGHKLAELYMARVVCLHGVPKKIVSDRGSQF 1160
Query: 1203 TSRFWGALQQALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLIE 1262
TS+FW LQ LGT+L S+AY+PQTDGQTER Q LED+LRACVLD GSWD+ LP E
Sbjct: 1161 TSKFWQKLQSELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACVLDFGGSWDKNLPYAE 1220
Query: 1263 FTYNNSFHASIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMRI 1322
F+YNNS+ AS+ M+P EALYGR+C+TPL W Q GE V G +++++ E+VK IQE++R+
Sbjct: 1221 FSYNNSYQASLQMSPNEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRV 1280
Query: 1323 S*SRQKSYADNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGPV 1382
+ S QKSYADNRR++L F+ GD+V+LRVTP+ GV R KL P+F+GP++I R G V
Sbjct: 1281 AQSCQKSYADNRRRDLVFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEV 1340
Query: 1383 AYRIALPPFLSHIHDVLHVSQLRKYMADDSHVLEPDDIQLKDDLTVVMPPIKIVDRSTKR 1442
AY++ LPP ++ IHDV HVSQL+K + + +PD I+L++DLT V P++I++ S ++
Sbjct: 1341 AYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPDCIELQEDLTYVEKPVRILEVSERK 1400
Query: 1443 LRNK*VSLVKVVW-NQATGDATWELEDKMRESHPDLFVNP*VSRAK 1487
RN+ + KV W N + +ATWE ED+++ +HP LF + SR +
Sbjct: 1401 TRNRVIRFCKVQWSNHSEEEATWEREDELKSAHPHLFSSSSESRGR 1446
>gb|AAV31377.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|54287529|gb|AAV31273.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1196
Score = 847 bits (2188), Expect = 0.0
Identities = 411/766 (53%), Positives = 548/766 (70%), Gaps = 11/766 (1%)
Query: 727 EYCKGKELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFV 786
E + +LYA SKCEFW+ EVKFLGHVISS GVAVDPS +ES++SW+QPK S+IRSF+
Sbjct: 434 EKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLSWKQPKTVSEIRSFL 493
Query: 787 GLAGYYRRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGE 846
GLAGYYRRF+++++K+ P+T+L +K + WTE CE+SFQE+KKRL TA +L LP +
Sbjct: 494 GLAGYYRRFIENFSKIARPMTRLLQKEVKYKWTEDCEQSFQELKKRLVTAPVLILPDSRK 553
Query: 847 PYDVYCDASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLY 906
+ VYCDAS GLGCVMMQE KV+AYASRQL+ HE NYPTHDLELAA+V+ALKIWRHYL+
Sbjct: 554 GFQVYCDASRLGLGCVMMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHALKIWRHYLF 613
Query: 907 GSMFTIYSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAM- 965
G+ +Y+DHKSLKY+F Q DLNMRQRRW+E ++DY+ ++ HPGK NVVADALSRK+
Sbjct: 614 GNRTEMYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVADALSRKSYC 673
Query: 966 HVSSLMVKELELLEAF*DLSLDVKIAPGKLSFGMVTVSSG---LLDEIKSKQETDEGLLE 1022
++S EL + F L+LD+ +S G V L D+++ Q D + E
Sbjct: 674 NMSEGRHLPWELCQEFEKLNLDI------VSKGFVATLEAQPTLFDQVREAQVNDPDIPE 727
Query: 1023 WRKLVTQGKAPEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQD 1082
+K + +GKA + + R+CVP++ ++ I+ E H++ SIHPG KMYQD
Sbjct: 728 IKKNMRRGKAIGYVEDEQGTVWLGERICVPDNKELKDTIMKEAHETLYSIHPGSTKMYQD 787
Query: 1083 LKLHFWWPGMKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTALP 1142
LK FWW M++++AEYV+ C C K EHQKPAG LQ L +PEWKW+ I MDF+T LP
Sbjct: 788 LKQQFWWASMRREIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLP 847
Query: 1143 LTRRRFDAIWVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSRF 1202
T D+IWVVVDRL K AHF+P+ Y KLAE+++A++V LHGVP IVSDR S+F
Sbjct: 848 RTSAGHDSIWVVVDRLIKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKIVSDRGSQF 907
Query: 1203 TSRFWGALQQALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLIE 1262
T +FW LQ +GT+L S+AY+PQTDGQTER Q LED+LRACVLD GSWD+ LP E
Sbjct: 908 TWKFWQKLQVEMGTRLNFSTAYHPQTDGQTERVNQILEDMLRACVLDFGGSWDKNLPYAE 967
Query: 1263 FTYNNSFHASIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMRI 1322
F+YNNS+ AS+ MAPYEALYGR+C+TPL W Q GE V G +++++ E+VK IQE++R+
Sbjct: 968 FSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRV 1027
Query: 1323 S*SRQKSYADNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGPV 1382
+ SRQKSYADNRR++L F+ GD+V+LRVTP+ GV R KL P F+GP++I R G V
Sbjct: 1028 AQSRQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHRFQTKGKLAPCFVGPFKIVSRRGEV 1087
Query: 1383 AYRIALPPFLSHIHDVLHVSQLRKYMADDSHVLEPDDIQLKDDLTVVMPPIKIVDRSTKR 1442
AY++ LPP ++ IHDV HVSQL+K + + +PD I+L++DLT V P++I++ S +
Sbjct: 1088 AYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPDRIELQEDLTYVEKPVRILEVSERN 1147
Query: 1443 LRNK*VSLVKVVW-NQATGDATWELEDKMRESHPDLFVNP*VSRAK 1487
RN+ + KV W N + +ATWE ED+++ +HP LF + SR +
Sbjct: 1148 TRNRIIRFCKVQWSNHSEEEATWEREDELKSAHPHLFASSSESRGR 1193
>gb|AAP52378.1| putative retroelement [Oryza sativa (japonica cultivar-group)]
gi|37531578|ref|NP_920091.1| putative retroelement [Oryza
sativa (japonica cultivar-group)]
Length = 1461
Score = 845 bits (2183), Expect = 0.0
Identities = 412/766 (53%), Positives = 548/766 (70%), Gaps = 11/766 (1%)
Query: 727 EYCKGKELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFV 786
E + +LYA SKCEFW+ EVKFLGHVISS GVAVDPS +ES++SW+QPK S+IRSF+
Sbjct: 699 EKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLSWKQPKTVSEIRSFL 758
Query: 787 GLAGYYRRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGE 846
GLAGYYRRF+++++K+ P+T+L +K+ + WTE CE+SFQE+KKRL TA +L LP +
Sbjct: 759 GLAGYYRRFIENFSKIARPMTRLLQKDVKYKWTEDCEQSFQELKKRLVTAPVLILPDSRK 818
Query: 847 PYDVYCDASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLY 906
+ VYCDAS +GLGCV+MQE KV+AYASRQL HE NYPTHDLELAA+V+ALKIWRHYL+
Sbjct: 819 GFQVYCDASRHGLGCVLMQEGKVVAYASRQLCPHENNYPTHDLELAAVVHALKIWRHYLF 878
Query: 907 GSMFTIYSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAM- 965
G+ IY+DHKSLKY+F Q DLNMRQRRW+E ++DY+ ++ HPGK NVVADALSRK+
Sbjct: 879 GNRTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVADALSRKSYC 938
Query: 966 HVSSLMVKELELLEAF*DLSLDVKIAPGKLSFGMVTVSSG---LLDEIKSKQETDEGLLE 1022
++S EL + F L+L G +S G V L D+I+ Q D + E
Sbjct: 939 NMSEGRCLPWELCQEFERLNL------GIVSKGFVATLEAKPTLFDQIREAQMNDPDIQE 992
Query: 1023 WRKLVTQGKAPEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQD 1082
+K + +GKA F + R+CVP + ++ I+ E H++ SIHPG KMYQD
Sbjct: 993 IKKNMRRGKAIGFVEDEQGTVWLGERICVPENKELKNTIMKEAHETLYSIHPGSTKMYQD 1052
Query: 1083 LKLHFWWPGMKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTALP 1142
LKL FWW M++++AEYV+ C C K EHQKPAG LQ L +PEWKW+ I MDF+T LP
Sbjct: 1053 LKLQFWWASMRREIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLP 1112
Query: 1143 LTRRRFDAIWVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSRF 1202
T D+IWVVVDRLTK A F+PI Y KLAE+++A++V LHGVP IVSDR S+F
Sbjct: 1113 RTSAGHDSIWVVVDRLTKVAQFIPIKTTYTGHKLAELYMARVVCLHGVPKKIVSDRGSQF 1172
Query: 1203 TSRFWGALQQALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLIE 1262
TS+FW LQ LGT+L S+AY+PQTDGQTER Q LED+LRACVLD GSWD+ LP E
Sbjct: 1173 TSKFWQKLQSELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACVLDFGGSWDKNLPYAE 1232
Query: 1263 FTYNNSFHASIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMRI 1322
F+YNNS+ AS+ M+P EALYGR+C+TPL W Q GE V G +++++ E++K IQE++R+
Sbjct: 1233 FSYNNSYQASLQMSPNEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKMKIIQERLRV 1292
Query: 1323 S*SRQKSYADNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGPV 1382
+ SRQKSYADNRR++L F+ GD+V+LRVTP+ GV R KL P+F+GP++I R G V
Sbjct: 1293 AQSRQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEV 1352
Query: 1383 AYRIALPPFLSHIHDVLHVSQLRKYMADDSHVLEPDDIQLKDDLTVVMPPIKIVDRSTKR 1442
AY++ LPP ++ IHDV HVSQL+K + + +P I+L++DLT V P++I++ S +
Sbjct: 1353 AYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPGRIELQEDLTYVEKPVRILEVSERN 1412
Query: 1443 LRNK*VSLVKVVW-NQATGDATWELEDKMRESHPDLFVNP*VSRAK 1487
RN+ + KV W N + ++TWE ED+++ +HP LF + SR +
Sbjct: 1413 TRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPHLFSSSSESRGR 1458
>gb|AAO45752.1| pol protein [Cucumis melo]
Length = 923
Score = 842 bits (2176), Expect = 0.0
Identities = 403/751 (53%), Positives = 543/751 (71%), Gaps = 2/751 (0%)
Query: 730 KGKELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFVGLA 789
+ +LYA SKCEFW+++V FLGHV+S GV+VDP+KIE++ W +P S++RSF+GLA
Sbjct: 171 RDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLA 230
Query: 790 GYYRRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGEPYD 849
GYYRRFV++++++ +PLTQLT+K PF W++ CE+SFQ +K++L TA +L +P +
Sbjct: 231 GYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFV 290
Query: 850 VYCDASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLYGSM 909
+Y DAS GLGCV+MQ+ KV+AYASRQLK HE+NYPTHDLELAA+V+ALKIWRHYLYG
Sbjct: 291 IYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEK 350
Query: 910 FTIYSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAMHVSS 969
I++DHKSLKY F QK+LNMRQRRW+E ++DY+ ++ HPGK NVVADALSRK H ++
Sbjct: 351 IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAA 410
Query: 970 LMVKELELLEAF*DLSLDVKIAPGKLSFGMVTVSSGLLDEIKSKQETDEGLLEWRKLVTQ 1029
L+ ++ L + V + + +TV L I Q D L+E R L
Sbjct: 411 LITRQAPLHRDLERAEIAVLVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA 470
Query: 1030 GKAPEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQDLKLHF-W 1088
G+ EFS+ SD L + R+CVP+D+ ++ +L E H S S+HPG + + F
Sbjct: 471 GQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTEDVSGPEAGFIG 530
Query: 1089 WPGMKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTALPLTRRRF 1148
MK++VAE+VS CL C K QKPAG LQ L +PEWKW+++SMDF+T LP T R F
Sbjct: 531 GRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF 590
Query: 1149 DAIWVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSRFTSRFWG 1208
IWVVVDRLTK+AHFVP Y K A++++++IVRLHGVP SIVSDRD+RFTS+FW
Sbjct: 591 TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK 650
Query: 1209 ALQQALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLIEFTYNNS 1268
LQ A+GT+L S+A++PQTDGQTER Q LED+LRAC L+ GSWD L L+EF YNNS
Sbjct: 651 GLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS 710
Query: 1269 FHASIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMRIS*SRQK 1328
+ A+IGMAP+EALYGR C++P+CW + GE ++GPELVQ T E +++I+ +M + SRQK
Sbjct: 711 YQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK 770
Query: 1329 SYADNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGPVAYRIAL 1388
SYAD RRK+LEF+ GD VFL+V PM GV R + KL+P+F+GP++I ER+GPVAYR+AL
Sbjct: 771 SYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL 830
Query: 1389 PPFLSHIHDVLHVSQLRKYMADDSHVLEPDDIQLKDDLTVVMPPIKIVDRSTKRLRNK*V 1448
PP LS +HDV HVS LRKY+ D SHV++ + +++ ++L+ V P++++ R K LRNK +
Sbjct: 831 PPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLARGVKTLRNKQI 890
Query: 1449 SLVKVVW-NQATGDATWELEDKMRESHPDLF 1478
LVKV+W N +ATWE ED MR +P+LF
Sbjct: 891 PLVKVLWRNHRVEEATWEREDDMRSRYPELF 921
>gb|AAU10772.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|50511449|gb|AAT77372.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1501
Score = 837 bits (2162), Expect = 0.0
Identities = 402/767 (52%), Positives = 551/767 (71%), Gaps = 13/767 (1%)
Query: 727 EYCKGKELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFV 786
E K +LYA SKC+FW+ EVKFLGH+IS+QGVAVDPS +ES+ W PK S IRSF+
Sbjct: 739 EKLKEHQLYAKFSKCDFWLSEVKFLGHIISAQGVAVDPSNVESVTKWTPPKTVSQIRSFL 798
Query: 787 GLAGYYRRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGE 846
GLAGYYRRF+++++K+ SP+TQL KK++ F W+ +C +SF+E+KKRL +A +L LP + +
Sbjct: 799 GLAGYYRRFIENFSKIASPMTQLLKKDEKFKWSAECNQSFEELKKRLVSAPVLILPDQTK 858
Query: 847 PYDVYCDASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLY 906
+ VYCDAS GLGCV+MQE +V+AYASRQL+ HE NYPTHDLELAA+V+ALKIWRHYL
Sbjct: 859 DFQVYCDASRQGLGCVLMQEGRVVAYASRQLRPHETNYPTHDLELAAVVHALKIWRHYLI 918
Query: 907 GSMFTIYSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAMH 966
G+ +Y+DHKSLKY+F Q DLN+RQRRW+E ++DY+ + HPGK NVVADALSRK+ +
Sbjct: 919 GNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADALSRKS-Y 977
Query: 967 VSSLMVKEL--ELLEAF*DLSLDVKIAPGKLSFGMVTVSSG---LLDEIKSKQETDEGLL 1021
+++ + + +L + L+L G + G V L+D++++ Q D +
Sbjct: 978 CNAVCTEGMCDKLQQDLEHLNL------GIVEHGYVAALEARPTLVDQVRAAQVNDPEIA 1031
Query: 1022 EWRKLVTQGKAPEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQ 1081
E +K + GKA +F + + R+CVP+D ++ LIL E H+++ SIHPG KMYQ
Sbjct: 1032 ELKKNMRVGKARDFHEDENGTIWLGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQ 1091
Query: 1082 DLKLHFWWPGMKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTAL 1141
DLK FWW M++++AE+V+ C C K EHQ+PAG LQ L +PEWKW+ I MDF+T L
Sbjct: 1092 DLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGL 1151
Query: 1142 PLTRRRFDAIWVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSR 1201
P T D+IWVVVDRLTK AHF+P+ Y ++LAE+++++I+ LHGVP IVSDR S+
Sbjct: 1152 PRTSSGHDSIWVVVDRLTKVAHFIPVHTTYTGKRLAELYLSRIMCLHGVPKKIVSDRGSQ 1211
Query: 1202 FTSRFWGALQQALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLI 1261
FTS+FW LQ+ LGT+L S+AY+PQTDGQTER Q LED+LRAC LD G+WD+ LP
Sbjct: 1212 FTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGAWDKSLPYA 1271
Query: 1262 EFTYNNSFHASIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMR 1321
EF+YNNS+ AS+ MAP+EALYGR+C+TPL W Q GE + G E++ + E+V+ ++E++R
Sbjct: 1272 EFSYNNSYQASLQMAPFEALYGRKCRTPLFWDQTGERQLFGTEVLTEAEEKVRTVRERLR 1331
Query: 1322 IS*SRQKSYADNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGP 1381
I+ SRQKSYADNRR+EL F+AGD+V+LRVTP+ GV R KL P+F+GPY+I ER G
Sbjct: 1332 IAQSRQKSYADNRRRELTFEAGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRILERRGE 1391
Query: 1382 VAYRIALPPFLSHIHDVLHVSQLRKYMADDSHVLEPDDIQLKDDLTVVMPPIKIVDRSTK 1441
VAY++ LPP + IHDV HVSQL+K + + I +++DLT V PI+I++ S +
Sbjct: 1392 VAYQLELPPNMVGIHDVFHVSQLKKCLRVPEEQASSEHIDIQEDLTYVEKPIRILETSER 1451
Query: 1442 RLRNK*VSLVKVVW-NQATGDATWELEDKMRESHPDLFVNP*VSRAK 1487
R RNK + KV W + + +ATWE ED+++ +HP LF N SR +
Sbjct: 1452 RTRNKVIRFCKVQWSHHSEEEATWEREDELKAAHPHLFANSSESRGR 1498
>gb|AAT66771.1| putative polyprotein [Solanum demissum]
Length = 1769
Score = 836 bits (2159), Expect = 0.0
Identities = 400/756 (52%), Positives = 543/756 (70%), Gaps = 7/756 (0%)
Query: 730 KGKELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFVGLA 789
+ + LYA SKCEFW+E V FLGHV+S +G+ VDP+KIE+I W +P ++IRSFVGLA
Sbjct: 1008 RDQRLYAKFSKCEFWLESVAFLGHVVSKEGIRVDPAKIEAIRDWVRPTSVTEIRSFVGLA 1067
Query: 790 GYYRRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGEPYD 849
GYYRRFV+ ++ + + LT+LT+ + PF W+E+CE SF +K+ LTTA IL LP EGE +
Sbjct: 1068 GYYRRFVEGFSTIAALLTRLTRVDVPFVWSEECEASFLRLKELLTTAPILTLPVEGEGFT 1127
Query: 850 VYCDASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLYGSM 909
VYCDAS GLGCV+MQ+ +VIAYASRQLKIHE NYPTHDLELAA+V+ALKIWRHYLYG
Sbjct: 1128 VYCDASGVGLGCVLMQQGRVIAYASRQLKIHEHNYPTHDLELAAVVFALKIWRHYLYGVR 1187
Query: 910 FTIYSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAMHVSS 969
IY+DH+SL+Y+ Q+DLN RQRRW+E L+DY+ + HPGK NVVADALSRKA+ + S
Sbjct: 1188 CEIYTDHRSLQYIMSQRDLNSRQRRWIELLKDYDLSILYHPGKANVVADALSRKAVSMGS 1247
Query: 970 LMVKELEL------LEAF*DLSLDVKIAPGKLSFGMVTVSSGLLDEIKSKQETDEGLLEW 1023
L +E +++ + + + I+ + + V S LLD I+ Q D+ L+
Sbjct: 1248 LAFLSVEERPLALDIQSLANSMVRLDISDSRCVLAFMRVQSSLLDRIRGCQFEDDTLVAL 1307
Query: 1024 RKLVTQGKAPEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQDL 1083
R V + ++ D +L+ GR+CVP + +LIL E H+SR SIHPG KMY+DL
Sbjct: 1308 RDRVLADDGGQATLDPDGVLKFAGRICVPRVGDLIQLILSEAHESRYSIHPGTAKMYRDL 1367
Query: 1084 KLHFWWPGMKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTALPL 1143
+ H+WW GM++ +A++VS CL C K EH +P G+ Q L +PEWKW+ I+MDFV LP
Sbjct: 1368 RQHYWWSGMRRDIADFVSRCLCCQQVKAEHLRPGGEFQRLPIPEWKWERITMDFVVGLPR 1427
Query: 1144 TRRRFDAIWVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSRFT 1203
T R D+IWV+VDRLTK+AHF+P+ + E+LA I+I ++VRLHGVP SI+SDR S+FT
Sbjct: 1428 TSRGVDSIWVIVDRLTKSAHFLPVHTTFSAERLARIYIREVVRLHGVPVSIISDRGSQFT 1487
Query: 1204 SRFWGALQQALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLIEF 1263
S FW A Q+ LGT++ LS++++PQTDGQ+ERTIQ LED+LRACV+D G W++ LPL EF
Sbjct: 1488 SSFWRAFQEELGTRVHLSTSFHPQTDGQSERTIQVLEDMLRACVMDFGGQWEQFLPLAEF 1547
Query: 1264 TYNNSFHASIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMRIS 1323
YNNS+H+SI MAP+EALYGRRC++P+ W + E G +L+Q+ ++V+ IQ+++R +
Sbjct: 1548 AYNNSYHSSIQMAPFEALYGRRCRSPVGWFESTEPRPRGTDLLQEALDQVRVIQDRLRTA 1607
Query: 1324 *SRQKSYADNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGPVA 1383
SR +SYAD RR+ L F GD VFLRV+PM GV R + KL+P++IGP++I VG VA
Sbjct: 1608 QSRHQSYADQRRRPLRFSVGDRVFLRVSPMKGVMRFGRRGKLSPRYIGPFEILRTVGEVA 1667
Query: 1384 YRIALPPFLSHIHDVLHVSQLRKYMADDSHVLEPDDIQLKDDLTVVMPPIKIVDRSTKRL 1443
Y +ALPP S IH V HVS LR+Y+ D+SHVL+ D ++L D LT V P+ I+ R +RL
Sbjct: 1668 YELALPPVFSAIHPVFHVSMLRRYVPDESHVLQYDAVELDDRLTFVEEPVAILARDVRRL 1727
Query: 1444 RNK*VSLVKVVW-NQATGDATWELEDKMRESHPDLF 1478
R++ + +VKV W ++ +ATWE E +MRE P LF
Sbjct: 1728 RSRAIPVVKVRWRHRPVEEATWETEQEMREQFPSLF 1763
>gb|AAP52863.1| putative retroelement [Oryza sativa (japonica cultivar-group)]
gi|37532548|ref|NP_920576.1| putative retroelement [Oryza
sativa (japonica cultivar-group)]
gi|15217216|gb|AAK92560.1| Putative retroelement [Oryza
sativa]
Length = 1714
Score = 835 bits (2158), Expect = 0.0
Identities = 403/767 (52%), Positives = 551/767 (71%), Gaps = 13/767 (1%)
Query: 727 EYCKGKELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFV 786
E K +LYA SKC+FW+ EVKFLGHVI++QGVAVDPS +ES+ W PK S IRSF+
Sbjct: 952 EKLKEHQLYAKFSKCDFWLTEVKFLGHVITAQGVAVDPSNVESVTKWTPPKTVSQIRSFL 1011
Query: 787 GLAGYYRRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGE 846
GLAGYYRRF+++++++ P+TQL KK++ F WT +C++SF+E+KK+L +A +L LP +
Sbjct: 1012 GLAGYYRRFIENFSRIARPMTQLLKKDEKFKWTAECDKSFEELKKKLVSAPVLILPDPTK 1071
Query: 847 PYDVYCDASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLY 906
+ VYCDAS +GLGCV+MQE +V+AYASRQL+ HE NYPTHDLELAA+V+ALKIWRHYL
Sbjct: 1072 DFQVYCDASRHGLGCVLMQEGRVVAYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLI 1131
Query: 907 GSMFTIYSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAMH 966
G+ +Y+DHKSLKY+F Q DLN+RQRRW+E ++DY+ + HPGK NVVADALSRK+ +
Sbjct: 1132 GNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADALSRKS-Y 1190
Query: 967 VSSLMVKEL--ELLEAF*DLSLDVKIAPGKLSFGMVTVSSG---LLDEIKSKQETDEGLL 1021
++L V+ + EL + F L++ G + G V L+D++++ Q D +
Sbjct: 1191 CTALCVEGMCEELRQEFEHLNV------GIVEHGFVAALEARPTLVDQVRAAQVNDSEIA 1244
Query: 1022 EWRKLVTQGKAPEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQ 1081
E +K + GKA +F + R+CVPND ++ LIL E H+++ SIHPG KMYQ
Sbjct: 1245 ELKKNMRVGKARDFHEDEHGTIWMGERLCVPNDKELKDLILTEAHQTQYSIHPGSTKMYQ 1304
Query: 1082 DLKLHFWWPGMKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTAL 1141
DLK FWW M++++AE+V+ C C K EHQ+PAG LQ L +PEWKW+ I MDF+T L
Sbjct: 1305 DLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGL 1364
Query: 1142 PLTRRRFDAIWVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSR 1201
P T D+IWVVVDRLTK AHF+P+ Y ++LAE+++A+I+ LHGVP IVSDR S+
Sbjct: 1365 PRTSLGHDSIWVVVDRLTKVAHFIPVHTTYTGKRLAELYLARIMCLHGVPKKIVSDRGSQ 1424
Query: 1202 FTSRFWGALQQALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLI 1261
FTS+FW LQ+ LGT+L S+AY+PQTDGQTER Q LED+LRAC LD G+WD+ LP
Sbjct: 1425 FTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGAWDKSLPYA 1484
Query: 1262 EFTYNNSFHASIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMR 1321
EF+YNNS+ AS+ MAP+EALYGR+C+TPL W Q GE + G E++ + E+V+ I+E++R
Sbjct: 1485 EFSYNNSYQASLQMAPFEALYGRKCRTPLFWDQTGERQLFGTEVLAEAEEKVRIIRERLR 1544
Query: 1322 IS*SRQKSYADNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGP 1381
I+ SRQKSYADNRR+EL F+AGD+V+LRVTP+ GV R KL P+F+GPY+I ER G
Sbjct: 1545 IAQSRQKSYADNRRRELTFEAGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYKILERRGE 1604
Query: 1382 VAYRIALPPFLSHIHDVLHVSQLRKYMADDSHVLEPDDIQLKDDLTVVMPPIKIVDRSTK 1441
VAY++ LP + IHDV HVSQL+K + + + I +++DLT V P++I+D S +
Sbjct: 1605 VAYQLELPSNMIGIHDVFHVSQLKKCLRVPEEQADSEHIDIQEDLTYVEKPVRILDTSER 1664
Query: 1442 RLRNK*VSLVKVVW-NQATGDATWELEDKMRESHPDLFVNP*VSRAK 1487
R RNK +V W + + +ATWE ED+++ +HP LF + SR +
Sbjct: 1665 RTRNKVTRFCRVQWSHHSEEEATWEREDELKAAHPHLFTSSSESRGR 1711
>ref|XP_476280.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|46485886|gb|AAS98511.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1678
Score = 834 bits (2155), Expect = 0.0
Identities = 402/763 (52%), Positives = 543/763 (70%), Gaps = 5/763 (0%)
Query: 727 EYCKGKELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFV 786
E + +LYA SKCEFW+ EVKFLGHVIS+ GVAVDPS +ES+ +W+QPK S+IRSF+
Sbjct: 916 EKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFL 975
Query: 787 GLAGYYRRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGE 846
GLAGYYRRF+++++K+ P+T+L +K+ + W+E+CE+SFQE+K RL +A IL LP +
Sbjct: 976 GLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDPKK 1035
Query: 847 PYDVYCDASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLY 906
+ VYCDAS GLGCV+MQE KV+AYASRQL+ HEKNYPTHD+ELAA+V+ALKIWRHYL+
Sbjct: 1036 GFQVYCDASKFGLGCVLMQEGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLF 1095
Query: 907 GSMFTIYSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAM- 965
G+ +Y+DHKSLKY+F Q DLNMRQRRW+E ++DY+ + HPGK NVVADALSRK
Sbjct: 1096 GTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYC 1155
Query: 966 HVSSLMVKELELLEAF*DLSLDVKIAPGKLSFGMVTVSSGLLDEIKSKQETDEGLLEWRK 1025
+ + LEL + F L+L + G+ + L+D+++ Q D + E +K
Sbjct: 1156 NATEGRQLPLELCKEFERLNLGIV---GRGFVAALEAKPTLIDQVREAQINDPDIQEIKK 1212
Query: 1026 LVTQGKAPEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQDLKL 1085
+ +GKA F + R+CVP++ ++ IL E H + SIHPG KMYQDLK
Sbjct: 1213 KMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKE 1272
Query: 1086 HFWWPGMKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTALPLTR 1145
FWW MK+++AEYV+ C C K EHQKPAG LQ L +PEWKW+ I MDF+T LP T
Sbjct: 1273 RFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTS 1332
Query: 1146 RRFDAIWVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSRFTSR 1205
D+IWV+VDRLTK AHF+P+ Y +LAE+++A+IV LHGVP IVSDR S+FTS
Sbjct: 1333 SGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSN 1392
Query: 1206 FWGALQQALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLIEFTY 1265
FW LQ+ +G+KL S+AY+PQTDGQTER Q LED+LRAC LD GSWD+ LP EF Y
Sbjct: 1393 FWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFLY 1452
Query: 1266 NNSFHASIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMRIS*S 1325
NNS+ AS+ MAPYEALYGR+C+TPL W Q GE V G +++++ E+VK IQE++R++ S
Sbjct: 1453 NNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQS 1512
Query: 1326 RQKSYADNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGPVAYR 1385
R KSYADNRR++L F+ GD+V+LRVTP+ GV R KL P+F+GPY+I R G VAY+
Sbjct: 1513 RHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQ 1572
Query: 1386 IALPPFLSHIHDVLHVSQLRKYMADDSHVLEPDDIQLKDDLTVVMPPIKIVDRSTKRLRN 1445
+ LP L+ +H+V HVSQL+K + + + I++++DLT V PI+I++ S +R RN
Sbjct: 1573 LELPQSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEKPIRILETSERRTRN 1632
Query: 1446 K*VSLVKVVW-NQATGDATWELEDKMRESHPDLFVNP*VSRAK 1487
+ + KV W N + ++TWE ED+++ +HP LF + SR +
Sbjct: 1633 RVIRFCKVQWSNHSEEESTWEREDELKSAHPYLFASSSESRGR 1675
>ref|NP_917371.1| Putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1475
Score = 834 bits (2154), Expect = 0.0
Identities = 402/763 (52%), Positives = 545/763 (70%), Gaps = 5/763 (0%)
Query: 727 EYCKGKELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFV 786
E + +LYA SKCEFW+ EVK LGHVIS+ GVAVDPS +ES+ +W+QPK S+IRSF+
Sbjct: 713 EKLREHQLYAKFSKCEFWLSEVKLLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFL 772
Query: 787 GLAGYYRRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGE 846
GLAGYYRRF+++++K+ P+T+L +K+ + W+E+CE SFQE+K RL +A IL LP +
Sbjct: 773 GLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECERSFQELKSRLISAPILILPDPKK 832
Query: 847 PYDVYCDASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLY 906
+ VYCDAS GLGCV+MQ+ KV+AYASRQL+ HEKNYPTHD+ELAA+V+ALKIWRHYL+
Sbjct: 833 GFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLF 892
Query: 907 GSMFTIYSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAM- 965
G+ +Y+DHKSLKY+F Q DLNMRQRRW+E ++DY+ + HPGK NVVADALSRK+
Sbjct: 893 GTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKSYC 952
Query: 966 HVSSLMVKELELLEAF*DLSLDVKIAPGKLSFGMVTVSSGLLDEIKSKQETDEGLLEWRK 1025
+V+ LEL + F L+L + G+ + L+D+++ Q D + E +K
Sbjct: 953 NVTEGRQLPLELCKEFERLNLGIV---GRGFIAALEAKPTLIDQVREAQINDPDIQEIKK 1009
Query: 1026 LVTQGKAPEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQDLKL 1085
+ +GKA F + R+CVP++ ++ IL E H + SIHPG KMYQDLK
Sbjct: 1010 NMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKE 1069
Query: 1086 HFWWPGMKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTALPLTR 1145
FWW MK+++AEYV+ C C K EHQKPAG LQ L +PEWKW+ I MDF+T LP T
Sbjct: 1070 RFWWVSMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTS 1129
Query: 1146 RRFDAIWVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSRFTSR 1205
D+IWV+VDRLTK AHF+P+ Y +LAE+++A+IV LHGVP IVSDR S+FTS
Sbjct: 1130 SGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSN 1189
Query: 1206 FWGALQQALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLIEFTY 1265
FW LQ+ +G+KL S+AY+PQTDGQTER Q LED+LRAC LD GSWD+ LP EF+Y
Sbjct: 1190 FWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSY 1249
Query: 1266 NNSFHASIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMRIS*S 1325
NNS+ AS+ MAPYEALYGR+C+TPL W Q GE V G +++++ E+VK IQE++R++ S
Sbjct: 1250 NNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQS 1309
Query: 1326 RQKSYADNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGPVAYR 1385
R KSYADNRR++L F+ GD+V+LRVTP+ GV R KL P+F+GPY+I R G VAY+
Sbjct: 1310 RHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYKIVSRRGEVAYQ 1369
Query: 1386 IALPPFLSHIHDVLHVSQLRKYMADDSHVLEPDDIQLKDDLTVVMPPIKIVDRSTKRLRN 1445
+ LP L+ +H+V HVSQL+K + + + I++++DLT V PI+I++ S +R RN
Sbjct: 1370 LELPQSLAGVHNVFHVSQLKKCLRVPTEEANLEQIEVQEDLTYVEKPIRILETSERRTRN 1429
Query: 1446 K*VSLVKVVW-NQATGDATWELEDKMRESHPDLFVNP*VSRAK 1487
+ + KV W N + ++TWE ED+++ +HP LFV+ SR +
Sbjct: 1430 RVIRFCKVQWSNHSEEESTWEREDELKSAHPYLFVSSSESRGR 1472
>gb|AAP52480.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37531782|ref|NP_920193.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|18657010|gb|AAL78097.1| Putative polyprotein [Oryza
sativa]
Length = 1473
Score = 833 bits (2153), Expect = 0.0
Identities = 405/766 (52%), Positives = 544/766 (70%), Gaps = 11/766 (1%)
Query: 727 EYCKGKELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFV 786
E + +LYA SKCEFW+ EVKFLGHVIS+ GVAVDPS +ES+ +W+QPK S+IRSF+
Sbjct: 711 EKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFL 770
Query: 787 GLAGYYRRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGE 846
GLAGYYRRF+++++K+ P+T+L +K+ + W+E+CE+SFQE+K RL +A IL LP +
Sbjct: 771 GLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLVSAPILILPDPKK 830
Query: 847 PYDVYCDASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLY 906
+ VYCDAS GLGCV+MQ+ KV+AYASRQL+ HEKNYPTHDL+LAA+V+ALKIWRHYL+
Sbjct: 831 GFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLKLAAVVHALKIWRHYLF 890
Query: 907 GSMFTIYSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAM- 965
G+ +Y+DHKSLKY+F Q DLNMRQRRW+E ++DY+ + HPGK NVVADALSRK
Sbjct: 891 GTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYC 950
Query: 966 HVSSLMVKELELLEAF*DLSLDVKIAPGKLSFGMVTVSSG---LLDEIKSKQETDEGLLE 1022
+ + LEL + F L+L G +S G V L+D+++ Q D + E
Sbjct: 951 NATEGRQLPLELCKEFERLNL------GIVSRGFVAALEAKPTLIDQVREAQINDPDIQE 1004
Query: 1023 WRKLVTQGKAPEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQD 1082
+K +GKA F + R+CVP++ ++ IL E H + SIHPG KMYQD
Sbjct: 1005 IKKNRRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQD 1064
Query: 1083 LKLHFWWPGMKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTALP 1142
LK FWW MK+++AEYV+ C C K EHQKPAG LQ L +PEWKW+ I MDF+T LP
Sbjct: 1065 LKKRFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLP 1124
Query: 1143 LTRRRFDAIWVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSRF 1202
T D+IWV+VDRLTK AHF+P+ Y +LAE+++A+IV LHGVP IVSDR S+F
Sbjct: 1125 RTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQF 1184
Query: 1203 TSRFWGALQQALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLIE 1262
TS FW LQ+ +G+KL S+AY+PQTDGQTER Q LED+LRAC LD GSWD+ LP E
Sbjct: 1185 TSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAE 1244
Query: 1263 FTYNNSFHASIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMRI 1322
F+YNNS+ AS+ MAPYEALYGR+C+TPL W Q GE V G +++++ E+VK IQE++R+
Sbjct: 1245 FSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRV 1304
Query: 1323 S*SRQKSYADNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGPV 1382
+ SR KSYADNRR++L F+ GD+V+LRVTP+ GV R KL P+F+GPY+I R G V
Sbjct: 1305 AQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYKIVSRRGEV 1364
Query: 1383 AYRIALPPFLSHIHDVLHVSQLRKYMADDSHVLEPDDIQLKDDLTVVMPPIKIVDRSTKR 1442
AY++ LP L+ +HDV HVSQL+K + + + I++++DLT V PI+I++ S +R
Sbjct: 1365 AYQLELPQSLAGVHDVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEKPIRILETSERR 1424
Query: 1443 LRNK*VSLVKVVW-NQATGDATWELEDKMRESHPDLFVNP*VSRAK 1487
RN+ + KV W N + ++TWE ED+++ +HP LF + SR +
Sbjct: 1425 TRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPYLFASSSESRGR 1470
>gb|AAP52185.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37531192|ref|NP_919898.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|20177640|gb|AAM14695.1| Putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1680
Score = 833 bits (2153), Expect = 0.0
Identities = 403/766 (52%), Positives = 545/766 (70%), Gaps = 11/766 (1%)
Query: 727 EYCKGKELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFV 786
E + +LYA SKCEFW+ EVKFLGHVIS+ GVAVDPS +ES+ +W+QPK S+IRSF+
Sbjct: 918 EKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFL 977
Query: 787 GLAGYYRRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGE 846
GLAGYYR+F+++++K+ P+T+L +K+ + W+E+CE+SFQE+K RL +A IL LP +
Sbjct: 978 GLAGYYRKFIENFSKIAKPMTRLFQKDVKYKWSEECEQSFQELKNRLISAPILILPDPKK 1037
Query: 847 PYDVYCDASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLY 906
+ VYCDAS GLGCV+MQ+ KV+AYASRQL+ HEKNYPTHDLELAA+V+ALKIWRHYL+
Sbjct: 1038 GFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLF 1097
Query: 907 GSMFTIYSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAM- 965
G+ +Y+DHKSLKY+F Q DLNMRQRRW+E ++DY+ + HPGK NVVADALSRK
Sbjct: 1098 GTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYC 1157
Query: 966 HVSSLMVKELELLEAF*DLSLDVKIAPGKLSFGMVTVSSG---LLDEIKSKQETDEGLLE 1022
+ + LEL + F L+L G +S G V L+D+++ Q D + E
Sbjct: 1158 NATEGRQLPLELCKEFERLNL------GIVSIGFVAALEAKPTLIDQVREAQTNDPDIQE 1211
Query: 1023 WRKLVTQGKAPEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQD 1082
+K + +GKA F + R+CVP++ ++ IL E H + SIHPG KMYQD
Sbjct: 1212 IKKNMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQD 1271
Query: 1083 LKLHFWWPGMKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTALP 1142
LK FWW MK+++AEYV+ C C K EHQKPAG LQ L +PEWKW+ I MDF+T LP
Sbjct: 1272 LKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLP 1331
Query: 1143 LTRRRFDAIWVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSRF 1202
T D+IWV+VDRLTK AHF+P+ Y +LAE+++A+IV LHGVP IVSDR S+F
Sbjct: 1332 KTSLGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQF 1391
Query: 1203 TSRFWGALQQALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLIE 1262
TS FW LQ+ +G+KL S+AY+PQTDGQTER Q LED+LRAC LD GSWD+ LP E
Sbjct: 1392 TSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAE 1451
Query: 1263 FTYNNSFHASIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMRI 1322
F+YNNS+ AS+ MAPYEALYGR+C+TPL W Q GE V G +++++ E+VK IQE++R+
Sbjct: 1452 FSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRV 1511
Query: 1323 S*SRQKSYADNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGPV 1382
+ SR KSYADNRR++L F+ GD+V+LRVTP+ GV R KL P+F+GPY+I R G V
Sbjct: 1512 AQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLVPRFVGPYKIVSRRGEV 1571
Query: 1383 AYRIALPPFLSHIHDVLHVSQLRKYMADDSHVLEPDDIQLKDDLTVVMPPIKIVDRSTKR 1442
AY++ LP L+ +H+V HVSQL+K + + + I++++DLT V PI+I++ + +R
Sbjct: 1572 AYQLELPQSLAEVHNVFHVSQLKKCLRVPTEEANLEQIEVQEDLTYVEKPIRILETNERR 1631
Query: 1443 LRNK*VSLVKVVW-NQATGDATWELEDKMRESHPDLFVNP*VSRAK 1487
RN+ + KV W N + ++TWE ED+++ +HP LF + SR +
Sbjct: 1632 TRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPYLFASSSESRGR 1677
>gb|AAP52586.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37531994|ref|NP_920299.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|22857578|gb|AAN09852.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1715
Score = 833 bits (2152), Expect = 0.0
Identities = 399/763 (52%), Positives = 544/763 (71%), Gaps = 5/763 (0%)
Query: 727 EYCKGKELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFV 786
E + +LYA SKCEFW+ EVKFLGH+IS+ GVAVDPS +ES+ +W+QPK S+IRSF+
Sbjct: 953 EKLREHQLYAKFSKCEFWLSEVKFLGHIISAGGVAVDPSNVESVTNWKQPKTVSEIRSFL 1012
Query: 787 GLAGYYRRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGE 846
GLAGYYRRF+++++K+ P+T+L +K+ + W+E+CE+SFQE+K RL +A IL LP +
Sbjct: 1013 GLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDPKK 1072
Query: 847 PYDVYCDASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLY 906
+ VYCDAS GLGCV+MQ+ KV+AYASRQL+ HEKNYPTHD+ELAA+V+ALKIWRHYL+
Sbjct: 1073 GFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLF 1132
Query: 907 GSMFTIYSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAM- 965
G+ +Y+DHKSLKY+F Q DLNMRQRRW+E ++DY+ + HPGK NVVADALSRK
Sbjct: 1133 GTRTEVYTDHKSLKYIFTQSDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYC 1192
Query: 966 HVSSLMVKELELLEAF*DLSLDVKIAPGKLSFGMVTVSSGLLDEIKSKQETDEGLLEWRK 1025
+ + LEL + F L+L + G+ + L+D+++ Q D + E +K
Sbjct: 1193 NATEGRQLPLELCKEFERLNLGIV---GRGFVAALEAKPTLIDQVREAQINDPDIQEIKK 1249
Query: 1026 LVTQGKAPEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQDLKL 1085
+ +GKA F + R+CVP++ ++ IL E H + SIHPG KMYQDLK
Sbjct: 1250 NMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKE 1309
Query: 1086 HFWWPGMKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTALPLTR 1145
FWW MK+++AEYV+ C C K EHQKPAG LQ L +PEWKW+ I MDF+T LP T
Sbjct: 1310 RFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTS 1369
Query: 1146 RRFDAIWVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSRFTSR 1205
D+IWV+VDRLTK AHF+P+ Y +LAE+++A+IV LHGVP IVSDR S+FTS
Sbjct: 1370 SGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSN 1429
Query: 1206 FWGALQQALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLIEFTY 1265
FW LQ+ +G+KL S+AY+PQTDGQTER Q LED+LRAC LD GSWD+ LP EF+Y
Sbjct: 1430 FWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSY 1489
Query: 1266 NNSFHASIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMRIS*S 1325
NNS+ AS+ MAPYEALYGR+C+TPL W Q GE V G +++++ E+VK IQE++R++ S
Sbjct: 1490 NNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQS 1549
Query: 1326 RQKSYADNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGPVAYR 1385
R KSYADNRR++L F+ GD+V+LRVTP+ GV R KL P+F+GPY+I R G VAY+
Sbjct: 1550 RHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQ 1609
Query: 1386 IALPPFLSHIHDVLHVSQLRKYMADDSHVLEPDDIQLKDDLTVVMPPIKIVDRSTKRLRN 1445
+ LP L+ +H+V HVSQL+K + + + I++++DLT V PI+I++ + +R RN
Sbjct: 1610 LELPQSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEKPIRILETNERRTRN 1669
Query: 1446 K*VSLVKVVW-NQATGDATWELEDKMRESHPDLFVNP*VSRAK 1487
+ + KV W N + ++TWE ED+++ +HP LF + SR +
Sbjct: 1670 RVIRFCKVQWSNHSEEESTWEREDELKSAHPHLFASSSESRGR 1712
>emb|CAE02978.3| OSJNBa0086B14.15 [Oryza sativa (japonica cultivar-group)]
gi|50924632|ref|XP_472673.1| OSJNBa0086B14.15 [Oryza
sativa (japonica cultivar-group)]
Length = 1516
Score = 833 bits (2152), Expect = 0.0
Identities = 402/767 (52%), Positives = 549/767 (71%), Gaps = 13/767 (1%)
Query: 727 EYCKGKELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFV 786
E K +LYA SKC+FW+ EVKFLGHVIS+QGVAVDPS +ES+ W PK S IRSF+
Sbjct: 754 EKLKEHQLYAKFSKCDFWLSEVKFLGHVISAQGVAVDPSNVESVTKWTPPKTVSQIRSFL 813
Query: 787 GLAGYYRRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGE 846
GLAGYYRRF+++++K+ P+TQL KK++ F W+ +C +SF+E+KKRL +A +L LP + +
Sbjct: 814 GLAGYYRRFIENFSKIARPMTQLLKKDEKFKWSAECNQSFEELKKRLVSAPVLILPDQTK 873
Query: 847 PYDVYCDASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLY 906
+ VYCDAS GLGCV+MQE +V+AYASRQL+ HE NYPTHDLELAA+V+ALKIWRHYL
Sbjct: 874 DFQVYCDASRQGLGCVLMQEGRVVAYASRQLRSHETNYPTHDLELAAVVHALKIWRHYLI 933
Query: 907 GSMFTIYSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAMH 966
G+ +Y+DHKSLKY+F Q DLN+RQRRW+E ++DY+ + HPGK NVVADALSRK+ +
Sbjct: 934 GNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADALSRKS-Y 992
Query: 967 VSSLMVKEL--ELLEAF*DLSLDVKIAPGKLSFGMVTVSSG---LLDEIKSKQETDEGLL 1021
++L +++ +L + L+L G + G V L+D++++ Q D +
Sbjct: 993 CNALCTEDMCGKLQQDLEHLNL------GIVEHGYVAALEARPTLVDQVRAAQVNDSEIA 1046
Query: 1022 EWRKLVTQGKAPEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQ 1081
E +K + GKA +F + R+CVP+D ++ LIL E H+++ SIHPG KMYQ
Sbjct: 1047 ELKKNMRVGKARDFHEDEHGTIWLGERLCVPDDKELKDLILTEAHQAQYSIHPGSTKMYQ 1106
Query: 1082 DLKLHFWWPGMKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTAL 1141
DLK FWW M++++AE+V+ C C K EHQ+PAG LQ L +PEWKW+ I MDF+T L
Sbjct: 1107 DLKEKFWWASMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGL 1166
Query: 1142 PLTRRRFDAIWVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSR 1201
P T D+IWVVVDRLTK AHFVP+ Y ++LAE+++++I+ LHGVP IVSDR S+
Sbjct: 1167 PRTSSGQDSIWVVVDRLTKVAHFVPVHTTYTGKRLAELYLSRIMCLHGVPKKIVSDRGSQ 1226
Query: 1202 FTSRFWGALQQALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLI 1261
FTS+FW LQ+ LGT+L S+AY+PQTDGQTER Q LED+LRAC LD G+WD+ LP
Sbjct: 1227 FTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGAWDKSLPYA 1286
Query: 1262 EFTYNNSFHASIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMR 1321
EF+YNNS+ AS+ MAP+EALYGR+C+TPL W Q GE + G E++ + E+V+ ++E++R
Sbjct: 1287 EFSYNNSYQASLQMAPFEALYGRKCRTPLFWDQTGERQLFGTEVLTEAEEKVRTVRERLR 1346
Query: 1322 IS*SRQKSYADNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGP 1381
I+ SRQKSYADNRR+EL F+AGD+V+LRVTP+ GV R KL P+F+GPY+I ER G
Sbjct: 1347 IAQSRQKSYADNRRRELTFEAGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRILERRGE 1406
Query: 1382 VAYRIALPPFLSHIHDVLHVSQLRKYMADDSHVLEPDDIQLKDDLTVVMPPIKIVDRSTK 1441
VAY++ LP + IHDV HVSQL+K + + I +++DLT V PI+I++ S +
Sbjct: 1407 VAYQLELPSNMVGIHDVFHVSQLKKCLRVPEEQASSEHIDIQEDLTYVEKPIRILETSER 1466
Query: 1442 RLRNK*VSLVKVVW-NQATGDATWELEDKMRESHPDLFVNP*VSRAK 1487
R RNK + KV W + + +ATWE ED+++ +HP LF + SR +
Sbjct: 1467 RTRNKIIRFCKVQWSHHSEEEATWEREDELKAAHPHLFASSSESRGR 1513
>gb|AAP52970.1| putative retroelement [Oryza sativa (japonica cultivar-group)]
gi|37532762|ref|NP_920683.1| putative retroelement [Oryza
sativa (japonica cultivar-group)]
gi|20042987|gb|AAM08795.1| Putative retroelement [Oryza
sativa]
Length = 1785
Score = 833 bits (2151), Expect = 0.0
Identities = 400/767 (52%), Positives = 552/767 (71%), Gaps = 13/767 (1%)
Query: 727 EYCKGKELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFV 786
E K +LYA SKC+FW+ EVKFLGHVI++QGVAVDPS +ES+ W PK S IRSF+
Sbjct: 1023 EKLKEHQLYAKFSKCDFWLTEVKFLGHVITAQGVAVDPSNVESVTKWTPPKTVSQIRSFL 1082
Query: 787 GLAGYYRRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGE 846
GLAGYYRRF+++++++ P+TQL KK++ F WT +C++SF+E+KK+L +A +L LP + +
Sbjct: 1083 GLAGYYRRFIENFSRIARPMTQLLKKDEKFKWTAECDKSFEELKKKLVSAPVLILPDQMK 1142
Query: 847 PYDVYCDASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLY 906
+ VYCDAS +GLGCV+MQE +V+AYASRQL+ HE NYPTHDLELAA+V+ALKIWRHYL
Sbjct: 1143 DFQVYCDASRHGLGCVLMQEGRVVAYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLI 1202
Query: 907 GSMFTIYSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAMH 966
G+ +Y+DHKSLKY+F Q DLN+RQRRW+E ++DY+ + HPGK NVVADALSRK+ +
Sbjct: 1203 GNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADALSRKS-Y 1261
Query: 967 VSSLMVKEL--ELLEAF*DLSLDVKIAPGKLSFGMVTVSSG---LLDEIKSKQETDEGLL 1021
++L ++ L +L + F L++ G + G V L+D++++ Q D +
Sbjct: 1262 CTALCIEGLCEKLRQEFEHLNV------GIVEHGFVAALEARPTLVDQVRAAQVNDSEIA 1315
Query: 1022 EWRKLVTQGKAPEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQ 1081
E +K + GKA +F + R+CVP+D ++ LIL E H+++ SIHPG KMYQ
Sbjct: 1316 ELKKNMRVGKARDFHEDEHGTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQ 1375
Query: 1082 DLKLHFWWPGMKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTAL 1141
DLK FWW M++++AE+V+ C C K EHQ+PAG LQ L +PEWKW+ I MDF+T L
Sbjct: 1376 DLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGL 1435
Query: 1142 PLTRRRFDAIWVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSR 1201
P T D+IWVVVDRLTK AHF+P+ Y ++LAE+++A+I+ LHGVP IVSDR S+
Sbjct: 1436 PRTSSGHDSIWVVVDRLTKVAHFIPVHTTYTGKRLAELYLARIMCLHGVPKKIVSDRGSQ 1495
Query: 1202 FTSRFWGALQQALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLI 1261
FTS+FW LQ+ +GT+L S+AY+PQTDGQTER Q LED+LRAC LD G+WD+ LP
Sbjct: 1496 FTSKFWQKLQEEMGTRLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGAWDKSLPYA 1555
Query: 1262 EFTYNNSFHASIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMR 1321
EF+YNNS+ AS+ MAP+EALYGR+C+TPL W Q GE + G E++ + E+V+ I+E++R
Sbjct: 1556 EFSYNNSYQASLQMAPFEALYGRKCRTPLFWDQTGERQLFGTEVLAEAEEKVRIIRERLR 1615
Query: 1322 IS*SRQKSYADNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGP 1381
I+ SRQKSYADNRR+EL F+AGD+V+LRVTP+ GV R KL P+F+GPY+I ER G
Sbjct: 1616 IAQSRQKSYADNRRRELTFEAGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYKILERRGE 1675
Query: 1382 VAYRIALPPFLSHIHDVLHVSQLRKYMADDSHVLEPDDIQLKDDLTVVMPPIKIVDRSTK 1441
VAY++ LP + IHDV HVSQL+K + + + I +++DLT V P++I+D S +
Sbjct: 1676 VAYQLELPSNMIGIHDVFHVSQLKKCLRVPEEQADSEHIDIQEDLTYVEKPVRILDASER 1735
Query: 1442 RLRNK*VSLVKVVW-NQATGDATWELEDKMRESHPDLFVNP*VSRAK 1487
R RNK +V W + + +ATWE ED+++ +HP LF + SR +
Sbjct: 1736 RTRNKVTRFCRVQWSHHSEEEATWEREDELKAAHPHLFTSSSESRGR 1782
>gb|AAP52680.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37532182|ref|NP_920393.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|23266283|gb|AAN16322.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1796
Score = 832 bits (2150), Expect = 0.0
Identities = 399/767 (52%), Positives = 551/767 (71%), Gaps = 13/767 (1%)
Query: 727 EYCKGKELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFV 786
E K +LYA SKC+FW+ EVKFLGHVI++QGVAVDPS +ES+ W PK S IRSF+
Sbjct: 1034 EKLKEHQLYAKFSKCDFWLTEVKFLGHVITAQGVAVDPSNVESVTKWTPPKTVSQIRSFL 1093
Query: 787 GLAGYYRRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGE 846
GLAGYYRRF+++++++ P+TQL KK++ F WT +C++SF+E+KK+L +A +L LP +
Sbjct: 1094 GLAGYYRRFIENFSRIARPMTQLLKKDEKFKWTAECDKSFEELKKKLVSAPVLILPDPTK 1153
Query: 847 PYDVYCDASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLY 906
+ VYCDAS +GLGCV+MQE +V+AYASRQL+ HE NYPTHDLELAA+V+ALKIWRHYL
Sbjct: 1154 DFQVYCDASRHGLGCVLMQEGRVVAYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLI 1213
Query: 907 GSMFTIYSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAMH 966
G+ +Y+DHKSLKY+F Q DLN+RQRRW+E ++DY+ + HPGK NVVADAL RK+ +
Sbjct: 1214 GNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADALRRKS-Y 1272
Query: 967 VSSLMVKEL--ELLEAF*DLSLDVKIAPGKLSFGMVTVSSG---LLDEIKSKQETDEGLL 1021
++L ++ + EL + F L++ G + G V L+D++++ Q D +
Sbjct: 1273 CTALCIEGMCEELRQEFEHLNM------GIVEHGFVAALEARPTLVDQVRAAQVNDPEIA 1326
Query: 1022 EWRKLVTQGKAPEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQ 1081
E +K + GKA +F + R+CVP+D ++ LIL E H+++ SIHPG KMYQ
Sbjct: 1327 ELKKNMRVGKARDFFEDEHGTIWMGERLCVPDDKELKELILTEAHQTQYSIHPGSTKMYQ 1386
Query: 1082 DLKLHFWWPGMKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTAL 1141
DLK FWW M++++AE+V+ C C K EHQ+PAG LQ L +PEWKW+ I MDF+T L
Sbjct: 1387 DLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGL 1446
Query: 1142 PLTRRRFDAIWVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSR 1201
P T D+IWVVVDRLTK AHF+P+ Y ++LAE+++A+I+ LHGVP IVSDR S+
Sbjct: 1447 PRTSSGHDSIWVVVDRLTKVAHFIPVHTTYTGKRLAELYLARIMCLHGVPKKIVSDRGSQ 1506
Query: 1202 FTSRFWGALQQALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLI 1261
FTS+FW LQ+ LGT+L S+AY+PQTDGQTER Q LED+LRAC LD G+WD+ LP
Sbjct: 1507 FTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGAWDKSLPYA 1566
Query: 1262 EFTYNNSFHASIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMR 1321
EF+YNNS+ AS+ MAP+EALYGR+C+TPL W Q GE + G E++ + E+V+ I+E++R
Sbjct: 1567 EFSYNNSYQASLRMAPFEALYGRKCRTPLFWDQTGERQLFGTEVLAEAEEKVRTIRERLR 1626
Query: 1322 IS*SRQKSYADNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGP 1381
I+ SRQKSYADNR++EL F+AGD+V+LRVTP+ GV R KL P+F+GPY+I ER G
Sbjct: 1627 IAQSRQKSYADNRQRELTFEAGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYKILERRGE 1686
Query: 1382 VAYRIALPPFLSHIHDVLHVSQLRKYMADDSHVLEPDDIQLKDDLTVVMPPIKIVDRSTK 1441
VAY++ LP + IHDV HVSQL+K + + + I +++DLT V P++I+D S +
Sbjct: 1687 VAYQLELPSNMIGIHDVFHVSQLKKCLRVPEEQADSEHIDIQEDLTYVEKPVRILDTSER 1746
Query: 1442 RLRNK*VSLVKVVW-NQATGDATWELEDKMRESHPDLFVNP*VSRAK 1487
R RNK + +V W + + +ATWE ED+++ +HP LF + SR +
Sbjct: 1747 RTRNKVIRFCRVQWSHHSEEEATWEREDELKAAHPHLFASSSESRGR 1793
>gb|AAP52558.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37531938|ref|NP_920271.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|22138474|gb|AAM93458.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1406
Score = 832 bits (2150), Expect = 0.0
Identities = 401/763 (52%), Positives = 543/763 (70%), Gaps = 5/763 (0%)
Query: 727 EYCKGKELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFV 786
E + +LYA SKCEFW+ EVKFLGHVIS+ GVAVDPS +ES+ +W+QPK S+IRSF+
Sbjct: 644 EKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFL 703
Query: 787 GLAGYYRRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGE 846
GLAGYYRRF+++++K+ P+T+L +K+ + W+E+CE SFQE+K RL +A IL LP +
Sbjct: 704 GLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECERSFQELKSRLISAPILILPDPKK 763
Query: 847 PYDVYCDASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLY 906
+ VYCDAS GLGCV+MQ+ KV+AYASRQL+ HEKNYPTHD+ELAA+V+ALKIWRHYL+
Sbjct: 764 GFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLF 823
Query: 907 GSMFTIYSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAM- 965
G+ +Y+DHKSLKY+F Q DLNMRQRRW+E ++DY+ + HPGK NVVADALSRK
Sbjct: 824 GTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYC 883
Query: 966 HVSSLMVKELELLEAF*DLSLDVKIAPGKLSFGMVTVSSGLLDEIKSKQETDEGLLEWRK 1025
+ + LEL + F L+L + G+ + L+D+++ Q D + E +K
Sbjct: 884 NATEGRQLPLELCKEFERLNLGIV---GRGFVAALEAKPTLIDQVREAQINDPDIQEIKK 940
Query: 1026 LVTQGKAPEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQDLKL 1085
+ +GKA F + R+CVP++ ++ IL E H + SIHPG KMYQDLK
Sbjct: 941 NMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKE 1000
Query: 1086 HFWWPGMKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTALPLTR 1145
FWW MK+++AEYV+ C C K EHQKPAG LQ L +PEWKW+ I MDF+T LP T
Sbjct: 1001 RFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTS 1060
Query: 1146 RRFDAIWVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSRFTSR 1205
D+IWV+VDRLTK AHF+P+ Y +LAE+++A+IV LHGVP IVSDR S+FTS
Sbjct: 1061 SGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSN 1120
Query: 1206 FWGALQQALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLIEFTY 1265
FW LQ+ +G+KL S+AY+PQTDGQTER Q LED+LRAC LD GSWD+ LP EF+Y
Sbjct: 1121 FWEKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSY 1180
Query: 1266 NNSFHASIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMRIS*S 1325
NNS+ AS+ MAPYEALYGR+C+TPL W Q GE V G +++++ E+VK IQE++R++ S
Sbjct: 1181 NNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQS 1240
Query: 1326 RQKSYADNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGPVAYR 1385
R KSYADNRR++L F+ GD+V+LRVTP+ GV R KL P+F+GPY+I R G VAY+
Sbjct: 1241 RYKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYKIVSRRGEVAYQ 1300
Query: 1386 IALPPFLSHIHDVLHVSQLRKYMADDSHVLEPDDIQLKDDLTVVMPPIKIVDRSTKRLRN 1445
+ LP L+ +H+V HVSQL+K + + D I++++DLT V PI+I++ + +R RN
Sbjct: 1301 LELPQSLAGVHNVFHVSQLKKCLRVPTEEANIDQIEVQEDLTYVEKPIRILETNERRTRN 1360
Query: 1446 K*VSLVKVVW-NQATGDATWELEDKMRESHPDLFVNP*VSRAK 1487
+ + KV W N + ++TWE ED+++ +HP LF + SR +
Sbjct: 1361 RVIRFCKVQWSNHSEEESTWEREDELKSAHPLLFASSSESRGR 1403
>gb|AAP52470.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37531762|ref|NP_920183.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|21321760|gb|AAM47295.1| Putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|18657020|gb|AAL78107.1| Putative polyprotein [Oryza
sativa]
Length = 1819
Score = 832 bits (2150), Expect = 0.0
Identities = 401/767 (52%), Positives = 551/767 (71%), Gaps = 13/767 (1%)
Query: 727 EYCKGKELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFV 786
E K +LYA SKC+FW+ EVKFLGHVI++QGVAVDPS +ES+ W PK S IRSF+
Sbjct: 1057 EKLKEHQLYAKFSKCDFWLTEVKFLGHVITAQGVAVDPSNVESVTKWTPPKTVSQIRSFL 1116
Query: 787 GLAGYYRRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGE 846
GLAGYYRRF+++++++ P+TQL KK++ F WT +C++SF+E+KK+L +A +L LP + +
Sbjct: 1117 GLAGYYRRFIENFSRIARPMTQLLKKDEKFKWTAECDKSFEELKKKLVSAPVLILPDQMK 1176
Query: 847 PYDVYCDASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLY 906
+ VYCDAS +GLGCV+MQE +V+AYASRQL+ HE NYPTHDLELAA+V+ALKIWRHYL
Sbjct: 1177 DFQVYCDASRHGLGCVLMQEGRVVAYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLI 1236
Query: 907 GSMFTIYSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAMH 966
G+ +Y+DHKSLKY+F Q DLN+RQRRW+E ++DY+ + HPGK NVVADALSRK+ +
Sbjct: 1237 GNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADALSRKS-Y 1295
Query: 967 VSSLMVKEL--ELLEAF*DLSLDVKIAPGKLSFGMVTVSSG---LLDEIKSKQETDEGLL 1021
++L + + EL + F L++ G + G V L+D++++ Q D +
Sbjct: 1296 CTALCTEGMCEELRQEFEHLNI------GIVEHGFVAALEARPTLVDQVRAAQVNDPEIA 1349
Query: 1022 EWRKLVTQGKAPEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQ 1081
E +K + GKA +F + R+CVP+D ++ LIL E H+++ SIHPG KMYQ
Sbjct: 1350 ELKKNMRVGKARDFLEDEHGTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQ 1409
Query: 1082 DLKLHFWWPGMKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTAL 1141
DLK FWW M++++AE+V+ C C K EHQ+PAG LQ L +PEWKW+ I MDF+T L
Sbjct: 1410 DLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGL 1469
Query: 1142 PLTRRRFDAIWVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSR 1201
P T D+IWVVVDRLTK AHF+P+ Y ++LAE+++A+I+ LHGVP IVSDR S+
Sbjct: 1470 PRTSSGHDSIWVVVDRLTKVAHFIPVHTTYTGKRLAELYLARIMCLHGVPRKIVSDRGSQ 1529
Query: 1202 FTSRFWGALQQALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLI 1261
FTS+FW LQ+ LGT+L S+AY+PQTDGQTER Q LED+LRAC LD G+WD+ LP
Sbjct: 1530 FTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGAWDKSLPYA 1589
Query: 1262 EFTYNNSFHASIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMR 1321
EF+YNNS+ AS+ MAP+EALYGR+C+TPL W Q GE + G E++ + E+V+ I+E++R
Sbjct: 1590 EFSYNNSYQASLQMAPFEALYGRKCRTPLFWDQTGERQLFGTEVLAEAEEKVRIIRERLR 1649
Query: 1322 IS*SRQKSYADNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGP 1381
I+ SRQKSYADNRR+EL F+AGD+V+LRVTP+ GV R KL P+F+GPY+I ER G
Sbjct: 1650 IAQSRQKSYADNRRRELTFEAGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYKILERRGE 1709
Query: 1382 VAYRIALPPFLSHIHDVLHVSQLRKYMADDSHVLEPDDIQLKDDLTVVMPPIKIVDRSTK 1441
VAY++ LP + IHDV HVSQL+K + + + I +++DLT V P++I+D S +
Sbjct: 1710 VAYQLELPSNMIGIHDVFHVSQLKKCLRVPEEQADSEHIDIQEDLTYVEKPVRILDTSER 1769
Query: 1442 RLRNK*VSLVKVVW-NQATGDATWELEDKMRESHPDLFVNP*VSRAK 1487
R RNK +V W + + +ATWE ED+++ +HP LF + SR +
Sbjct: 1770 RTRNKVTRFCRVQWSHHSEEEATWEREDELKAAHPHLFTSSSESRGR 1816
>ref|NP_914275.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1521
Score = 832 bits (2149), Expect = 0.0
Identities = 400/767 (52%), Positives = 551/767 (71%), Gaps = 13/767 (1%)
Query: 727 EYCKGKELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFV 786
E K +LYA SKC+FW+ EVKFLGHVI++QGVAVDPS +ES+ W PK S IRSF+
Sbjct: 759 EKLKEHQLYAKFSKCDFWLTEVKFLGHVITAQGVAVDPSNVESVTKWTPPKTVSQIRSFL 818
Query: 787 GLAGYYRRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGE 846
GLAGYYRRF+++++++ P+TQL KK++ F WT +C++SF+E+K++L +A +L LP + +
Sbjct: 819 GLAGYYRRFIENFSRIARPMTQLLKKDEKFKWTAECDKSFEELKRKLVSAPVLILPDQTK 878
Query: 847 PYDVYCDASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLY 906
+ VYCDAS +GLGCV+MQE +V+AYASRQL+ HE NYPTHDLELAA+V+ALKIWRHYL
Sbjct: 879 DFQVYCDASRHGLGCVLMQEGRVVAYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLI 938
Query: 907 GSMFTIYSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAMH 966
G+ +Y+DHKSLKY+F Q DLN+RQRRW+E ++DY+ + HPGK NVVADALSRK+ +
Sbjct: 939 GNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADALSRKS-Y 997
Query: 967 VSSLMVKEL--ELLEAF*DLSLDVKIAPGKLSFGMVTVSSG---LLDEIKSKQETDEGLL 1021
++L ++ + EL + F L++ G + G V L+D++++ Q D +
Sbjct: 998 CTALCIEGMCEELRQEFEHLNV------GIVEHGFVAALEARPTLVDQVRAAQVNDPEIA 1051
Query: 1022 EWRKLVTQGKAPEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQ 1081
E +K + GKA +F + R+CVP+D ++ LIL E H++ SIHPG KMYQ
Sbjct: 1052 ELKKNMRVGKARDFLEDEHGTIWMGERLCVPDDKELKDLILTEAHQTPYSIHPGSTKMYQ 1111
Query: 1082 DLKLHFWWPGMKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTAL 1141
DLK FWW M++++AE+V+ C C K EHQ+PAG LQ L +PEWKW+ I MDF+T L
Sbjct: 1112 DLKEKFWWVSMRREIAEFVALCNVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGL 1171
Query: 1142 PLTRRRFDAIWVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSR 1201
P T D+IWVVVDRLTK AHF+P+ Y ++LAE+++A+I+ LHGVP IVSDR S+
Sbjct: 1172 PRTSSGHDSIWVVVDRLTKVAHFIPVHTTYTGKRLAELYLARIMCLHGVPKKIVSDRGSQ 1231
Query: 1202 FTSRFWGALQQALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLI 1261
FTS+FW LQ+ LGT+L S+AY+PQTDGQTER Q LED+LRAC LD G+WD+ LP
Sbjct: 1232 FTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGAWDKSLPYA 1291
Query: 1262 EFTYNNSFHASIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMR 1321
EF+YNNS+ AS+ MAP+EALYGR+C+TPL W Q GE + G E++ + E+V+ I+E++R
Sbjct: 1292 EFSYNNSYQASLQMAPFEALYGRKCRTPLFWDQTGERQLFGTEVLAEAEEKVRIIRERLR 1351
Query: 1322 IS*SRQKSYADNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGP 1381
I+ SRQKSYADNRR+EL F+AGD+V+LRVTP+ GV R KL P+F+GPY+I ER G
Sbjct: 1352 IAQSRQKSYADNRRRELTFEAGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYKILERRGE 1411
Query: 1382 VAYRIALPPFLSHIHDVLHVSQLRKYMADDSHVLEPDDIQLKDDLTVVMPPIKIVDRSTK 1441
VAY++ LP + IHDV HVSQL+K + + + I +++DLT V P++I+D S +
Sbjct: 1412 VAYQLELPSNMIGIHDVFHVSQLKKCLRVPEEQADSEHIDIQEDLTYVEKPVRILDTSER 1471
Query: 1442 RLRNK*VSLVKVVW-NQATGDATWELEDKMRESHPDLFVNP*VSRAK 1487
R RNK +V W + + +ATWE ED+++ +HP LF + SR +
Sbjct: 1472 RTRNKVTRFCRVQWSHHSEEEATWEREDELKAAHPHLFTSSSESRGR 1518
>gb|AAV25053.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1777
Score = 832 bits (2149), Expect = 0.0
Identities = 401/767 (52%), Positives = 551/767 (71%), Gaps = 13/767 (1%)
Query: 727 EYCKGKELYANGSKCEFWMEEVKFLGHVISSQGVAVDPSKIESIMSWEQPKIASDIRSFV 786
E K +LYA SKC+FW+ EVKFLGHVI++QGVAVDPS +ES+ W PK S IRSF+
Sbjct: 1015 EKLKEHQLYAKFSKCDFWLTEVKFLGHVITAQGVAVDPSNVESVTKWTPPKTVSQIRSFL 1074
Query: 787 GLAGYYRRFVKDYAKLTSPLTQLTKKNQPFAWTEKCEESFQEMKKRLTTALILALPKEGE 846
GLAGYYRRF+++++++ P+TQL KK++ F WT +C++SF+E+KK+L +A +L LP +
Sbjct: 1075 GLAGYYRRFIENFSRIARPMTQLLKKDEKFKWTAECDKSFEELKKKLVSAPVLILPDPTK 1134
Query: 847 PYDVYCDASHNGLGCVMMQEKKVIAYASRQLKIHEKNYPTHDLELAAIVYALKIWRHYLY 906
+ VYCDAS +GLGCV+MQE +V+AYASRQL+ HE NYPTHDLELAA+V+ALKIWRHYL
Sbjct: 1135 DFQVYCDASRHGLGCVLMQEGRVVAYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLI 1194
Query: 907 GSMFTIYSDHKSLKYLFDQKDLNMRQRRWMEFLQDYEFDLQ*HPGKTNVVADALSRKAMH 966
G+ +Y+DHKSLKY+F Q DLN+RQRRW+E ++DY+ + HPGK NVVADALSRK+ +
Sbjct: 1195 GNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADALSRKS-Y 1253
Query: 967 VSSLMVKEL--ELLEAF*DLSLDVKIAPGKLSFGMVTVSSG---LLDEIKSKQETDEGLL 1021
++L V+ + +L + F L++ G + G V L+D++++ Q D +
Sbjct: 1254 CTALCVEGMCEKLRQEFEHLNV------GIVEHGFVAALEARPTLVDQVRAAQVNDSEIA 1307
Query: 1022 EWRKLVTQGKAPEFSIGSDNILRCKGRVCVPNDATMRRLILDEGHKSRLSIHPGMNKMYQ 1081
E +K + GKA +F + R+CVP+D ++ LIL E H+++ SIHPG KMYQ
Sbjct: 1308 ELKKNMRVGKARDFHEDEHGTIWMGERLCVPDDKELKGLILTEAHQTQYSIHPGSTKMYQ 1367
Query: 1082 DLKLHFWWPGMKKQVAEYVSTCLTC*NAKVEHQKPAGKLQSLDVPEWKWDSISMDFVTAL 1141
DLK FWW M++++AE+V+ C C K EHQ+PAG LQ L +PEWKW+ I MDF+T L
Sbjct: 1368 DLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGL 1427
Query: 1142 PLTRRRFDAIWVVVDRLTKTAHFVPISLNYKVEKLAEIHIAKIVRLHGVPSSIVSDRDSR 1201
P T D+IWVVVDRLTK AHF+P+ Y ++LAE+++A+I+ LHGVP IVSDR S+
Sbjct: 1428 PRTSSGHDSIWVVVDRLTKVAHFIPVHTTYTGKRLAELYLARIMCLHGVPRKIVSDRGSQ 1487
Query: 1202 FTSRFWGALQQALGTKLRLSSAYNPQTDGQTERTIQSLEDLLRACVLDHKGSWDELLPLI 1261
FTS+FW LQ+ LGT+L S+AY+PQTDGQTER Q LED+LRAC LD G+WD+ LP
Sbjct: 1488 FTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGAWDKSLPYA 1547
Query: 1262 EFTYNNSFHASIGMAPYEALYGRRCQTPLCWHQDGEHLVIGPELVQQTTEEVKRIQEKMR 1321
EF+YNNS+ AS+ MAP+EALYGR+C+TPL W Q GE + G E++ + E+V+ I+E++R
Sbjct: 1548 EFSYNNSYQASLQMAPFEALYGRKCRTPLFWDQTGERQLFGTEVLTEAEEKVRIIRERLR 1607
Query: 1322 IS*SRQKSYADNRRKELEFQAGDHVFLRVTPMTGVGRAIKSKKLTPKFIGPYQITERVGP 1381
I+ SRQKSYADNRR+EL F+AGD+V+LRVTP+ GV R KL P+F+GPY+I ER G
Sbjct: 1608 IAQSRQKSYADNRRRELTFEAGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYKILERRGE 1667
Query: 1382 VAYRIALPPFLSHIHDVLHVSQLRKYMADDSHVLEPDDIQLKDDLTVVMPPIKIVDRSTK 1441
VAY++ LP + IHDV HVSQL+K + + + I +++DLT V P++I+D S +
Sbjct: 1668 VAYQLELPSNMIGIHDVFHVSQLKKCLRVPEEQADSEHIDIQEDLTYVEKPVRILDTSER 1727
Query: 1442 RLRNK*VSLVKVVW-NQATGDATWELEDKMRESHPDLFVNP*VSRAK 1487
R RNK +V W + + +ATWE ED+++ +HP LF + SR +
Sbjct: 1728 RTRNKVTRFCRVQWSHHSEEEATWEREDELKAAHPHLFTSSSESRGR 1774
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.342 0.148 0.511
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,320,747,362
Number of Sequences: 2540612
Number of extensions: 89697652
Number of successful extensions: 261121
Number of sequences better than 10.0: 2637
Number of HSP's better than 10.0 without gapping: 2156
Number of HSP's successfully gapped in prelim test: 481
Number of HSP's that attempted gapping in prelim test: 252682
Number of HSP's gapped (non-prelim): 5009
length of query: 1489
length of database: 863,360,394
effective HSP length: 141
effective length of query: 1348
effective length of database: 505,134,102
effective search space: 680920769496
effective search space used: 680920769496
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (22.0 bits)
S2: 82 (36.2 bits)
Lotus: description of TM0388a.4