BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0383.7
(316 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_483049.1| putative splicing factor, arginine/serine-rich ... 54 8e-06
gb|AAK30205.1| poly(A)-binding protein [Daucus carota] 53 1e-05
emb|CAG79094.1| unnamed protein product [Yarrowia lipolytica CLI... 53 1e-05
ref|XP_479195.1| putative splicing factor, arginine/serine-rich ... 52 2e-05
ref|ZP_00527479.1| RNA-binding region RNP-1 (RNA recognition mo... 52 3e-05
gb|AAX30173.1| unknown [Schistosoma japonicum] 50 7e-05
gb|AAW26750.1| unknown [Schistosoma japonicum] 50 7e-05
gb|AAF53192.1| CG5442-PB, isoform B [Drosophila melanogaster] gi... 50 9e-05
ref|NP_682233.1| RNA binding protein [Thermosynechococcus elonga... 50 9e-05
gb|EAA53755.1| hypothetical protein MG09505.4 [Magnaporthe grise... 50 1e-04
ref|NP_700521.1| hypothetical protein PF10_0047 [Plasmodium falc... 49 1e-04
gb|EAL33619.1| GA18884-PA [Drosophila pseudoobscura] 49 1e-04
gb|AAM47964.1| RNA-binding protein-like [Arabidopsis thaliana] g... 49 2e-04
ref|XP_655058.1| hypothetical protein 37.t00027 [Entamoeba histo... 49 2e-04
ref|XP_318826.2| ENSANGP00000010223 [Anopheles gambiae str. PEST... 49 3e-04
gb|AAH46045.1| Zgc:56283 [Danio rerio] gi|47087067|ref|NP_998547... 49 3e-04
gb|EAA56754.1| hypothetical protein MG07109.4 [Magnaporthe grise... 49 3e-04
gb|EAA71898.1| hypothetical protein FG08421.1 [Gibberella zeae P... 48 3e-04
gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis] 48 3e-04
gb|AAH65971.1| Zgc:55876 protein [Danio rerio] 48 3e-04
>ref|XP_483049.1| putative splicing factor, arginine/serine-rich [Oryza sativa
(japonica cultivar-group)] gi|51964980|ref|XP_507274.1|
PREDICTED P0481F05.17 gene product [Oryza sativa
(japonica cultivar-group)] gi|42408182|dbj|BAD09319.1|
putative splicing factor, arginine/serine-rich [Oryza
sativa (japonica cultivar-group)]
Length = 289
Score = 53.5 bits (127), Expect = 8e-06
Identities = 29/82 (35%), Positives = 47/82 (56%)
Query: 32 KKVFTIFVDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRKSRFAFIRFKYEQDACE 91
+ F++ V +S + DL +F+RYG + VF+ R R+ G FAF+R+KY ++A +
Sbjct: 13 RDTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAEEAQK 72
Query: 92 AIRSLNGSWFFESFLMVNRARY 113
AI L+G +MV A+Y
Sbjct: 73 AIDRLDGRNVDGRNIMVQFAKY 94
>gb|AAK30205.1| poly(A)-binding protein [Daucus carota]
Length = 658
Score = 52.8 bits (125), Expect = 1e-05
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 24 DRQQWRTDKKVFTIFVDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRKSRFAFIRF 83
DR + K I+V +SD+ S DLR+ F YG + V + R G+ F F+ F
Sbjct: 208 DRDSEMSKTKFNNIYVKNLSDSTSEDDLRKTFGEYGTITSVVVM-RDADGKSKCFGFVNF 266
Query: 84 KYEQDACEAIRSLNGSWFFESFLMVNRARYDYTNRRNVTNRHSKVWKQK 132
+ +DA +A+ +LNG F + V +A+ + +R + K++
Sbjct: 267 ENPEDAAKAVDALNGKKFDDKEWYVGKAQKKSEREVELKSRFEQTVKEQ 315
Score = 35.4 bits (80), Expect = 2.2
Identities = 21/85 (24%), Positives = 43/85 (49%)
Query: 36 TIFVDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRKSRFAFIRFKYEQDACEAIRS 95
+++V + +V+ L +F + G + V + R GR + ++ + +QDA AI
Sbjct: 41 SLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATRAIDV 100
Query: 96 LNGSWFFESFLMVNRARYDYTNRRN 120
LN + + V+ +R D T+R++
Sbjct: 101 LNFTPLNNKTIRVSVSRRDPTDRKS 125
>emb|CAG79094.1| unnamed protein product [Yarrowia lipolytica CLIB99]
gi|50552081|ref|XP_503515.1| hypothetical protein
[Yarrowia lipolytica]
Length = 294
Score = 52.8 bits (125), Expect = 1e-05
Identities = 28/90 (31%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 31 DKKVFTIFVDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRKSRFAFIRFKYEQDAC 90
D T+ V +S+ + DLRRMF +YG+++ V++ + R GR FAF+ + + A
Sbjct: 210 DDDELTLRVTNLSEEATDDDLRRMFGKYGMINRVYVAKDRDTGRPRGFAFVTYTLKSHAQ 269
Query: 91 EAIRSLNGSWFFESFLMVNRARYDYTNRRN 120
A+ +++G F++ +M + DY+ +RN
Sbjct: 270 AALEAMDGHG-FDNLIM----KVDYSKKRN 294
>ref|XP_479195.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa (japonica cultivar-group)]
gi|33146621|dbj|BAC79909.1| putative splicing factor,
arginine/serine-rich 2 (Splicing factor SC35) [Oryza
sativa (japonica cultivar-group)]
Length = 275
Score = 52.0 bits (123), Expect = 2e-05
Identities = 25/82 (30%), Positives = 47/82 (56%)
Query: 32 KKVFTIFVDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRKSRFAFIRFKYEQDACE 91
+ +++ V ++ + DL +FE+YG + +++ R R+ G FAF+R+KYE +A +
Sbjct: 13 RDTYSLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQK 72
Query: 92 AIRSLNGSWFFESFLMVNRARY 113
A+ L+G +MV A+Y
Sbjct: 73 AVDRLDGRVVDGREIMVQFAKY 94
>ref|ZP_00527479.1| RNA-binding region RNP-1 (RNA recognition motif) [Solibacter
usitatus Ellin6076] gi|67858351|gb|EAM53488.1|
RNA-binding region RNP-1 (RNA recognition motif)
[Solibacter usitatus Ellin6076]
Length = 132
Score = 51.6 bits (122), Expect = 3e-05
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 37 IFVDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRKSRFAFIRFKYEQDACEAIRSL 96
IFV + N S +R +FERYG ++ + R+ GR FAF+ + E +A +AI +L
Sbjct: 4 IFVGNLDFNASEEGVRSLFERYGQVNSARIMTDRETGRSRGFAFVEMENEGEADQAISAL 63
Query: 97 NGSWFFESFLMVNRAR 112
NG L VN AR
Sbjct: 64 NGYTLDGRALNVNEAR 79
>gb|AAX30173.1| unknown [Schistosoma japonicum]
Length = 90
Score = 50.4 bits (119), Expect = 7e-05
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 35 FTIFVDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRKSRFAFIRFKYEQDACEAIR 94
+ +FV GV V D+ + FER+G + V++ R FAFI FKY +DA A+R
Sbjct: 11 YRVFVGGVDPRVGKVDIEQEFERFGPIADVWVARN-----PPGFAFIVFKYAEDADRAVR 65
Query: 95 SLNGSWFFESFLMVNRARYDYTNRR 119
++GS F S L V A + T R
Sbjct: 66 RMDGSRPFGSRLRVEHAVNNKTANR 90
>gb|AAW26750.1| unknown [Schistosoma japonicum]
Length = 131
Score = 50.4 bits (119), Expect = 7e-05
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 35 FTIFVDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRKSRFAFIRFKYEQDACEAIR 94
+ +FV GV V D+ + FER+G + V++ R FAFI FKY +DA A+R
Sbjct: 11 YRVFVGGVDPRVGKVDIEQEFERFGPIADVWVARN-----PPGFAFIVFKYAEDADRAVR 65
Query: 95 SLNGSWFFESFLMVNRARYDYTNRR 119
++GS F S L V A + T R
Sbjct: 66 RMDGSRPFGSRLRVEHAVNNKTANR 90
>gb|AAF53192.1| CG5442-PB, isoform B [Drosophila melanogaster]
gi|21358099|ref|NP_652612.1| CG5442-PB, isoform B
[Drosophila melanogaster] gi|17862504|gb|AAL39729.1|
LD32469p [Drosophila melanogaster]
gi|7243688|gb|AAF43415.1| SR family splicing factor SC35
[Drosophila melanogaster]
Length = 195
Score = 50.1 bits (118), Expect = 9e-05
Identities = 32/95 (33%), Positives = 50/95 (51%), Gaps = 1/95 (1%)
Query: 19 GSHGVDRQQWRTDKKVFTIFVDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRKSRF 78
G G R R D V ++ VD ++ + DLRR+FER G + +++ R R F
Sbjct: 8 GGLGAARPPPRIDGMV-SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 66
Query: 79 AFIRFKYEQDACEAIRSLNGSWFFESFLMVNRARY 113
AF+RF ++DA +A+ +++G L V ARY
Sbjct: 67 AFVRFYDKRDAEDALEAMDGRMLDGRELRVQMARY 101
>ref|NP_682233.1| RNA binding protein [Thermosynechococcus elongatus BP-1]
gi|22295168|dbj|BAC08995.1| RNA binding protein
[Thermosynechococcus elongatus BP-1]
Length = 90
Score = 50.1 bits (118), Expect = 9e-05
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 36 TIFVDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRKSRFAFIRFKYEQDACEAIRS 95
T+++ +S + +DLR +FE+YG + + L R+ G++ FAF+ E AI
Sbjct: 2 TLYIGNLSYEATENDLREVFEKYGAIRRIVLPVDRETGKRRGFAFVELADETQEAVAIDD 61
Query: 96 LNGSWFFESFLMVNRAR 112
L+G+ + L VN+A+
Sbjct: 62 LDGATWLGRVLKVNKAK 78
>gb|EAA53755.1| hypothetical protein MG09505.4 [Magnaporthe grisea 70-15]
gi|39961142|ref|XP_364660.1| hypothetical protein
MG09505.4 [Magnaporthe grisea 70-15]
Length = 762
Score = 49.7 bits (117), Expect = 1e-04
Identities = 31/111 (27%), Positives = 54/111 (47%), Gaps = 2/111 (1%)
Query: 24 DRQQWRTDKKV-FT-IFVDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRKSRFAFI 81
DRQ + K FT I+V ++ V+ + R +FE+YG + L R ++ G+ F F+
Sbjct: 229 DRQSKFDEMKANFTNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFV 288
Query: 82 RFKYEQDACEAIRSLNGSWFFESFLMVNRARYDYTNRRNVTNRHSKVWKQK 132
F +DA +A++ LN F L V RA+ + + + ++K
Sbjct: 289 NFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHEREEELRKSYEAARQEK 339
>ref|NP_700521.1| hypothetical protein PF10_0047 [Plasmodium falciparum 3D7]
gi|23494910|gb|AAN35245.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 880
Score = 49.3 bits (116), Expect = 1e-04
Identities = 60/254 (23%), Positives = 105/254 (40%), Gaps = 34/254 (13%)
Query: 37 IFVDGVSDNVSYHDLRRMFERYG-VLHGVFLQRRRKQGRKSRFAFIRFKYEQDACEAIRS 95
IFV +S + D+RR FE+YG ++H + K RFAFI + A A+
Sbjct: 333 IFVGNISSSAREEDVRRRFEQYGDIMHMQW---------KKRFAFIEYYKASHALNALEK 383
Query: 96 LNGSWFFESFLMVNRARYDYTN----RRNVTNRHSKVWKQKFVGEKQAFGQETVVSEG-- 149
NG FF L V +Y+ + N ++ H KV + F E++
Sbjct: 384 ENGKMFFGEELSVQEHQYNMNSYGYKNDNRSHFHLKVSRNY---SPPNFSNESIERRNSL 440
Query: 150 RKQVGQQPAKQVWRE-KCRTQEVHDMIFHTMVEDQRRLETWAEASLDEIYTIEVLQDFL- 207
R V K W++ K +EV + + +V+D E + + E Y E +D +
Sbjct: 441 RIVVKNIDEKASWQDLKDFGREVGSVSYANIVDDYHSKEKF---GIIEFYNHENAKDAIN 497
Query: 208 -------IGNGLSSIRFKPLGAKEVLLEFETREEMLDIIKDGFLQQK--FQSITPCTRAT 258
G + IR+ + E E + + D +++++ ++ P R
Sbjct: 498 ILNGKSFYGRSVDVIRYNDSDLSKRFKNKEREENYMRGVNDRYVREERAYRDKFPFDRIN 557
Query: 259 RSRSHSTWLKVRNV 272
R+R H+ + + RN+
Sbjct: 558 RTR-HTFFNRGRNI 570
>gb|EAL33619.1| GA18884-PA [Drosophila pseudoobscura]
Length = 188
Score = 49.3 bits (116), Expect = 1e-04
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 43 SDNVSYH----DLRRMFERYGVLHGVFLQRRRKQGRKSRFAFIRFKYEQDACEAIRSLNG 98
SDN++Y DLRR+FER G + +++ R R FAF+RF ++DA +A+ +++G
Sbjct: 28 SDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDG 87
Query: 99 SWFFESFLMVNRARY 113
L V ARY
Sbjct: 88 RMLDGRELRVQMARY 102
>gb|AAM47964.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|20260152|gb|AAM12974.1| RNA-binding protein-like
[Arabidopsis thaliana] gi|15237666|ref|NP_196048.1|
glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 310
Score = 48.9 bits (115), Expect = 2e-04
Identities = 28/75 (37%), Positives = 39/75 (51%)
Query: 37 IFVDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRKSRFAFIRFKYEQDACEAIRSL 96
IFV G+S V+ DL R F R+G + + R GR F FI F + E+IR +
Sbjct: 9 IFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMDESIREM 68
Query: 97 NGSWFFESFLMVNRA 111
+G F + + VNRA
Sbjct: 69 HGRDFGDRVISVNRA 83
>ref|XP_655058.1| hypothetical protein 37.t00027 [Entamoeba histolytica HM-1:IMSS]
gi|56472162|gb|EAL49670.1| hypothetical protein
37.t00027 [Entamoeba histolytica HM-1:IMSS]
Length = 685
Score = 48.9 bits (115), Expect = 2e-04
Identities = 29/108 (26%), Positives = 53/108 (48%), Gaps = 1/108 (0%)
Query: 5 GSARAWPVSRPEVVGSHGVDRQQWRTDKKVFTIFVDGVSDNVSYHDLRRMFERYGVLHGV 64
G A +S+P+V +R++ K + V V + ++R +F YG L GV
Sbjct: 574 GHAVQIEISQPKVKDEDHKERKEIEEHKVSNKLLVKNVPFETNIKEVRELFRTYGTLRGV 633
Query: 65 FLQRRRKQGRKSRFAFIRFKYEQDACEAIRSLNGSWFFESFLMVNRAR 112
L ++ G+ FAF+ + +Q+A A+ +L S F+ L++ A+
Sbjct: 634 RLPKK-VDGQNKGFAFVEYATKQEAANAMAALKNSHFYGRHLIIEYAK 680
Score = 40.4 bits (93), Expect = 0.068
Identities = 52/268 (19%), Positives = 109/268 (40%), Gaps = 25/268 (9%)
Query: 23 VDRQQWRTDKKVFTIFVDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRKSRFAFIR 82
+D + W + I++ + N + D+R+ F+R+G + + L + + F F+
Sbjct: 179 IDVKDWEEGR----IYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVL 234
Query: 83 FKYEQDACEAIRSLNGSWFFESFLMVNRARYD-YTNRRNVTNRHSKVWKQKFVGEKQA-- 139
F QDA +A ++ + + V A+ D Y+N++ +++ K KQ + K
Sbjct: 235 FVVPQDAVKACNEMDNKFIKGRIVHVTYAKADPYSNQQVGESKNYKEKKQNELKAKAGNQ 294
Query: 140 -------FGQETVVSEGRKQVGQQPAKQVWREKCRTQEVHDMIFHTMVEDQRRLETWAEA 192
Q+T VS +++G + +++ + V + V +Q + W E
Sbjct: 295 FNWSTLYMRQDTAVSAVAEELGMK-KEEILDVNAESMAVRVALAENYVINQTK--KWLEE 351
Query: 193 SLDEIYTIEVLQDFLIGNGLSSIRFKPLGAKEVLLEFETREEMLDIIKDGFLQQKFQSIT 252
+ +E N + I K + A + LE ++ E +K FL K +++
Sbjct: 352 NGVNCTVLENGMKEKCSNNI--IIVKNIAASAIELEVKSLFEKFGTLKQ-FLMPKSKALA 408
Query: 253 -----PCTRATRSRSHSTWLKVRNVPVY 275
A + + + R +P+Y
Sbjct: 409 LVEFEVANDAKTAFKRLVYSRYRGIPLY 436
Score = 37.7 bits (86), Expect = 0.44
Identities = 22/76 (28%), Positives = 38/76 (49%), Gaps = 1/76 (1%)
Query: 37 IFVDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRKSRFAFIRFKYEQDACEAIRSL 96
I + + + L++ FE++G + + R QG +F FI F+ E A AI +
Sbjct: 4 IIIKNLPERADEKILKQQFEKFGGITDCKVMRT-PQGNSRKFGFIGFENEDQAQTAITKM 62
Query: 97 NGSWFFESFLMVNRAR 112
NG++ S L V+ A+
Sbjct: 63 NGAYIQSSKLQVSLAK 78
Score = 35.4 bits (80), Expect = 2.2
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 36 TIFVDGVSDNVSYHDLRRMFERYGVLHGVFLQRRR--KQGRKSRFAFIRFKYEQDACEAI 93
T++V +S +R++FE+ G + + L + + K + S F F+ + +DA AI
Sbjct: 505 TLYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTKDKKVEKNSGFGFVEYAKHEDAINAI 564
Query: 94 RSLNG 98
++L G
Sbjct: 565 KTLQG 569
>ref|XP_318826.2| ENSANGP00000010223 [Anopheles gambiae str. PEST]
gi|55235949|gb|EAA14228.2| ENSANGP00000010223 [Anopheles
gambiae str. PEST]
Length = 172
Score = 48.5 bits (114), Expect = 3e-04
Identities = 41/154 (26%), Positives = 71/154 (45%), Gaps = 10/154 (6%)
Query: 16 EVVGSHGVDRQQWRTDKKVFTIFVDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRK 75
E + G R R D + ++ VD ++ + DLRR+FER G + +++ R R
Sbjct: 4 ESIKMSGYARPPPRIDGMI-SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRES 62
Query: 76 SRFAFIRFKYEQDACEAIRSLNGSWFFESFLMVNRARYDY-TNRRNVTNRHSKVWKQKFV 134
FAF+RF ++DA +A+ +++G L V ARY T+ + NR++
Sbjct: 63 RGFAFVRFYDKRDAEDALDAMDGRMLDGRELRVQMARYGRPTSPQRRGNRYN-------- 114
Query: 135 GEKQAFGQETVVSEGRKQVGQQPAKQVWREKCRT 168
G ++ +E R + + + R K RT
Sbjct: 115 GRERGRSRERHRRRSRSRSPEHRRRSYSRSKSRT 148
>gb|AAH46045.1| Zgc:56283 [Danio rerio] gi|47087067|ref|NP_998547.1| zgc:56283
[Danio rerio]
Length = 225
Score = 48.5 bits (114), Expect = 3e-04
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 39 VDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRKSRFAFIRFKYEQDACEAIRSLNG 98
VD ++ S LRR+FE+YG + V++ R R FAF+RF ++DA +A+ +++G
Sbjct: 18 VDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 77
Query: 99 SWFFESFLMVNRARY 113
+ L V ARY
Sbjct: 78 ALLDGRELRVQMARY 92
>gb|EAA56754.1| hypothetical protein MG07109.4 [Magnaporthe grisea 70-15]
gi|39971587|ref|XP_367184.1| hypothetical protein
MG07109.4 [Magnaporthe grisea 70-15]
Length = 303
Score = 48.5 bits (114), Expect = 3e-04
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 36 TIFVDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRKSRFAFIRFKYEQDACEAIRS 95
T+ V VS+ +LR MFER+G + VFL + R G FAFI F +DA +A
Sbjct: 224 TLRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRDTGLAKGFAFISFADREDAVKACNK 283
Query: 96 LNGSWFFESFLM 107
++G W F+ ++
Sbjct: 284 MDG-WGFKHLIL 294
>gb|EAA71898.1| hypothetical protein FG08421.1 [Gibberella zeae PH-1]
gi|46128087|ref|XP_388597.1| hypothetical protein
FG08421.1 [Gibberella zeae PH-1]
Length = 784
Score = 48.1 bits (113), Expect = 3e-04
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 24 DRQQWRTDKKV-FT-IFVDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRKSRFAFI 81
DRQ + K FT ++V ++ +V+ D R++FE+YG + L R ++G+ F F+
Sbjct: 227 DRQSKFEEMKANFTNVYVKNIAADVTEDDFRQLFEKYGDVTSSSL-ARDQEGKSRGFGFV 285
Query: 82 RFKYEQDACEAIRSLNGSWFFESFLMVNRARYDYTNRRNVTNRHSKVWKQKFVGEKQAFG 141
F + A +A+ LN F L V RA+ + + + + GE Q
Sbjct: 286 NFTTHESASKAVDELNNKDFHGQDLYVGRAQKKHEREEELRKSYEAARR----GEGQQMN 341
Query: 142 QETVVSEGRKQVGQQPAKQVWREKCRTQEVHD 173
+E K + + P + V +K + + V +
Sbjct: 342 KECGSITSTKVMRETPTEVVEEKKEKAETVKE 373
>gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis]
Length = 215
Score = 48.1 bits (113), Expect = 3e-04
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 39 VDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRKSRFAFIRFKYEQDACEAIRSLNG 98
VD ++ S LRR+FE+YG + V++ R R FAF+RF ++DA +A+ +++G
Sbjct: 18 VDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 77
Query: 99 SWFFESFLMVNRARY 113
+ L V ARY
Sbjct: 78 AVLDGRELRVQMARY 92
>gb|AAH65971.1| Zgc:55876 protein [Danio rerio]
Length = 220
Score = 48.1 bits (113), Expect = 3e-04
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 39 VDGVSDNVSYHDLRRMFERYGVLHGVFLQRRRKQGRKSRFAFIRFKYEQDACEAIRSLNG 98
VD ++ S LRR+FE+YG + V++ R R FAF+RF ++DA +A+ +++G
Sbjct: 18 VDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 77
Query: 99 SWFFESFLMVNRARY 113
+ L V ARY
Sbjct: 78 AILDGRELRVQMARY 92
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.323 0.137 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 526,326,822
Number of Sequences: 2540612
Number of extensions: 20659048
Number of successful extensions: 62056
Number of sequences better than 10.0: 1991
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 749
Number of HSP's that attempted gapping in prelim test: 59619
Number of HSP's gapped (non-prelim): 2981
length of query: 316
length of database: 863,360,394
effective HSP length: 128
effective length of query: 188
effective length of database: 538,162,058
effective search space: 101174466904
effective search space used: 101174466904
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 75 (33.5 bits)
Lotus: description of TM0383.7