BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0383.6
(493 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAL21313.1| hypothetical protein CNBD3670 [Cryptococcus neofo... 42 0.058
ref|NP_955179.1| CNPV156 hypothetical protein [Canarypox virus] ... 39 0.29
emb|CAD43075.1| putative CENP-E like kinetochore protein [Hordeu... 39 0.37
emb|CAB51467.1| Hypothetical protein W06A7.3c [Caenorhabditis el... 39 0.49
emb|CAB01522.2| Hypothetical protein W06A7.3a [Caenorhabditis el... 39 0.49
emb|CAB90556.1| human interferon-regulated resistance GTP-bindin... 39 0.49
gb|AAO09659.1| Biotin-(acetyl-CoA carboxylase) ligase [Vibrio vu... 39 0.49
ref|XP_534667.1| PREDICTED: similar to ring finger protein 34 is... 39 0.49
dbj|BAC04017.1| unnamed protein product [Homo sapiens] 39 0.49
gb|AAX41078.1| myxovirus resistance 1 [synthetic construct] 39 0.49
gb|AAX42653.1| myxovirus resistance 1 [synthetic construct] gi|6... 39 0.49
gb|AAX36236.1| myxovirus resistance 1 [synthetic construct] 39 0.49
gb|AAH14222.2| MX1 protein [Homo sapiens] 39 0.49
gb|AAA36337.1| interferon-induced Mx protein 39 0.49
emb|CAA90093.1| Hypothetical protein C07E3.1a [Caenorhabditis el... 38 0.64
emb|CAI59824.1| MIDAS-containing protein midasin [Nyctotherus ov... 38 0.64
dbj|BAB84102.1| DNA topoisomerase II [Aspergillus niger] 38 0.64
ref|NP_999226.1| Mx protein [Sus scrofa] gi|127569|sp|P27594|MX1... 38 0.83
dbj|BAD11809.1| Mx protein [Sus scrofa] 38 0.83
emb|CAH86572.1| conserved hypothetical protein [Plasmodium chaba... 38 0.83
>gb|EAL21313.1| hypothetical protein CNBD3670 [Cryptococcus neoformans var.
neoformans B-3501A] gi|57226470|gb|AAW42930.1|
hypothetical protein CND02680 [Cryptococcus neoformans
var. neoformans JEC21] gi|58266162|ref|XP_570237.1|
hypothetical protein CND02680 [Cryptococcus neoformans
var. neoformans JEC21]
Length = 316
Score = 41.6 bits (96), Expect = 0.058
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 22/183 (12%)
Query: 47 ASGMSSRNHKAMSEVSTSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQTSESIDDMLEETV 106
A ++R+ S SE E +E EG +D V P T K E + + LEE +
Sbjct: 28 AGPSNARDEDVKMNTRGSPSEDEDEEEDIEGWTEDTFVDKPFRTLKSKLEEVTNRLEEAI 87
Query: 107 QHLREAGYSLEEIKDLAVLKDWNFENFAGYRLEEGIEEVECVAAVNECKELAVVNVANGL 166
+ +++A +++EE A D + EN G L + ++ + + C E + G
Sbjct: 88 EEIKDAAFAIEE----ANPNDESLENIEG-SLFKAFDQRQVLQIKIRCLEQLEARLKGG- 141
Query: 167 SEYMLCNQIEAVNVHDDLINLKGTQKKE----TEETNFEEIKEQFSVEGGQVGKVWFDNS 222
EY NV+D +L + KE ++ + KE +W N
Sbjct: 142 EEY--------TNVNDAFNHLSEPEIKEYLAKSQRAKLRKFKEYIDFR----SNLWSINH 189
Query: 223 DKA 225
D A
Sbjct: 190 DDA 192
>ref|NP_955179.1| CNPV156 hypothetical protein [Canarypox virus]
gi|40233919|gb|AAR83502.1| CNPV156 hypothetical protein
[Canarypox virus]
Length = 832
Score = 39.3 bits (90), Expect = 0.29
Identities = 51/231 (22%), Positives = 98/231 (42%), Gaps = 27/231 (11%)
Query: 3 GSAPAR-----ILVDSSIPITTSREITVLLDGEIVKVM-VEPDHSAGVYLASGMSSRNHK 56
G AP R L ++SI T ++ + + I K++ VE A + + K
Sbjct: 139 GLAPRRETSQDSLQENSIQQTIKIKMQKITERAIQKIIEVEIQKIAERSMNKTVERSTKK 198
Query: 57 AMSEVSTSSSEHEGDEPVDEGQRDDGVVV----TPRVTEKQTSESIDDMLEETVQHLREA 112
+ + SE+E E ++ ++ +V T RVT+ T S++++ E T+Q + E
Sbjct: 199 ILENATKKISENEMQETIERSMKETIEIVMKDITERVTQTITERSMEEITERTIQGISER 258
Query: 113 GYSLEEIKDLAV----------LKDWNFENFAGYRLEEGIE-EVECVA--AVNECKELAV 159
S++EI ++ + + D + + ++E E EVE ++ + E E+A+
Sbjct: 259 --SIQEITEIEIQEITANTIKEITDRSIQEITRRAIQEITEIEVESISEIEIQEIIEMAI 316
Query: 160 VNVANGLSEYMLCNQIEAVNVHDDLINLKGTQKKETEETNFEEIKEQFSVE 210
+ + I+ +N+ I + Q E E +EI E E
Sbjct: 317 KETIERAMKRITERAIKILNIEIRQITERAMQ--EITENTMQEIVEMIMQE 365
>emb|CAD43075.1| putative CENP-E like kinetochore protein [Hordeum vulgare subsp.
vulgare]
Length = 581
Score = 38.9 bits (89), Expect = 0.37
Identities = 55/206 (26%), Positives = 87/206 (41%), Gaps = 25/206 (12%)
Query: 44 VYLASGMSSRNHKAMSEVSTSSSEHEGDEPVDEGQRDDG----VVVTPRVTEKQTSESID 99
V + SG+SS K S+ S+SSSE E + +DE + ++G ++ R+ E ++
Sbjct: 135 VSIGSGVSSDVSKKGSDGSSSSSESESE--LDESKEENGNSMFYALSQRIIE------LE 186
Query: 100 DMLEETVQHLREAGYSLEEIKDLAVLKDWNFENFAGYRLEEGIEEVECVAAVNECKELAV 159
D L ET L +LE+ ++ + + + +L E +EEV V E LA
Sbjct: 187 DELLETRGKLD----ALEDKNTISEVPEHD------EKLREDLEEVNSVKEALEAAVLAN 236
Query: 160 VNVANGLSEYM--LCNQIEAVNVHDDLINLKGTQKKETEETNFEEIKEQFSVEGGQVGKV 217
N +GL E + Q E H DL K Q+ + K E G + V
Sbjct: 237 KNETDGLKEAIASAAKQFEIELAHRDLEVDKCKQELVELSAKYLHDKSALEAEIGMLQGV 296
Query: 218 WFDNSDKAFLVGQQWKVNCGVRAQSV 243
NS+ Q K+ G R + +
Sbjct: 297 -ITNSEGELAKLSQEKLQLGSRVEEL 321
>emb|CAB51467.1| Hypothetical protein W06A7.3c [Caenorhabditis elegans]
gi|17565084|ref|NP_506656.1| RETiculon protein (ret-1)
[Caenorhabditis elegans] gi|7509048|pir||T26216
hypothetical protein W06A7.3c - Caenorhabditis elegans
Length = 2484
Score = 38.5 bits (88), Expect = 0.49
Identities = 49/190 (25%), Positives = 76/190 (39%), Gaps = 27/190 (14%)
Query: 37 EPDHSAGVYL--ASGMSSRNHKAMSEVSTSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQT 94
EP SA V +SG + +S S D+P Q +++ T Q
Sbjct: 45 EPVSSAKVIALESSGDCEEGNIKISANENSVEPDGADKPAHTEQEIPTIILPSETTVTQ- 103
Query: 95 SESIDDMLEETVQHLREAGYSLEEIKDLAVLKDWN--FENFAGYRLEEG----------- 141
++D L ET + E S++ K++ L+D F + +G E
Sbjct: 104 ---LEDHLSETEEKQNEVESSIKSEKNVIGLEDSGDTFRDTSGLAPAEDNEAEATITTDF 160
Query: 142 --IEEVECVAAVNECKELAVVNVANGLSEYMLCNQIEAVNVHDDLINLKGTQKKETEETN 199
+E + + NE KE+A GL EY++ N A V+DD+ N+ T E
Sbjct: 161 VPLESAGDIPSENEIKEVASAPDVVGLEEYIIGNIPNAPVVNDDIPNV------FTPEVA 214
Query: 200 FEEIKEQFSV 209
+E E FSV
Sbjct: 215 NDETVETFSV 224
>emb|CAB01522.2| Hypothetical protein W06A7.3a [Caenorhabditis elegans]
gi|17565086|ref|NP_506657.1| RETiculon protein (ret-1)
[Caenorhabditis elegans] gi|7509046|pir||T26215
hypothetical protein W06A7.3a - Caenorhabditis elegans
Length = 2607
Score = 38.5 bits (88), Expect = 0.49
Identities = 49/190 (25%), Positives = 76/190 (39%), Gaps = 27/190 (14%)
Query: 37 EPDHSAGVYL--ASGMSSRNHKAMSEVSTSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQT 94
EP SA V +SG + +S S D+P Q +++ T Q
Sbjct: 45 EPVSSAKVIALESSGDCEEGNIKISANENSVEPDGADKPAHTEQEIPTIILPSETTVTQ- 103
Query: 95 SESIDDMLEETVQHLREAGYSLEEIKDLAVLKDWN--FENFAGYRLEEG----------- 141
++D L ET + E S++ K++ L+D F + +G E
Sbjct: 104 ---LEDHLSETEEKQNEVESSIKSEKNVIGLEDSGDTFRDTSGLAPAEDNEAEATITTDF 160
Query: 142 --IEEVECVAAVNECKELAVVNVANGLSEYMLCNQIEAVNVHDDLINLKGTQKKETEETN 199
+E + + NE KE+A GL EY++ N A V+DD+ N+ T E
Sbjct: 161 VPLESAGDIPSENEIKEVASAPDVVGLEEYIIGNIPNAPVVNDDIPNV------FTPEVA 214
Query: 200 FEEIKEQFSV 209
+E E FSV
Sbjct: 215 NDETVETFSV 224
>emb|CAB90556.1| human interferon-regulated resistance GTP-binding protein MXA [Homo
sapiens] gi|21619147|gb|AAH32602.1| Myxovirus resistance
protein 1 [Homo sapiens] gi|4505291|ref|NP_002453.1|
myxovirus resistance protein 1 [Homo sapiens]
gi|5410451|gb|AAD43063.1| interferon-induced protein p78
[Homo sapiens] gi|127566|sp|P20591|MX1_HUMAN
Interferon-induced GTP-binding protein Mx1
(Interferon-regulated resistance GTP-binding protein
MxA) (Interferon-induced protein p78) (IFI-78K)
gi|190136|gb|AAA36458.1| p78 protein
Length = 662
Score = 38.5 bits (88), Expect = 0.49
Identities = 30/104 (28%), Positives = 51/104 (48%), Gaps = 15/104 (14%)
Query: 60 EVSTSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQTSESIDDMLEETVQHLREAGYSL--- 116
+++T+ + E EG R G++ P + +K T + + D++ V HL++ GY +
Sbjct: 222 DIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKK-GYMIVKC 280
Query: 117 ---EEIKDLAVLKD------WNFENFAGYR--LEEGIEEVECVA 149
+EI+D L + FEN +R LEEG V C+A
Sbjct: 281 RGQQEIQDQLSLSEALQREKIFFENHPYFRDLLEEGKATVPCLA 324
>gb|AAO09659.1| Biotin-(acetyl-CoA carboxylase) ligase [Vibrio vulnificus CMCP6]
gi|27364604|ref|NP_760132.1| Biotin-(acetyl-CoA
carboxylase) ligase [Vibrio vulnificus CMCP6]
Length = 202
Score = 38.5 bits (88), Expect = 0.49
Identities = 39/184 (21%), Positives = 75/184 (40%), Gaps = 31/184 (16%)
Query: 104 ETVQHLREAGYSLEEI-KDLAVLKDWNFENFA----GYRLEEGIEEVECVAAVNE-CKEL 157
ET+ H E G S I K + L+DW + + GY+L + + ++ V + +
Sbjct: 24 ETLGH--ELGISRAAISKHINALQDWGVDVYRIQGRGYQLAQPMTLLDEHQLVEQSANNV 81
Query: 158 AVVNVANGLSEYMLCNQIEAVNVHDDLINLKGTQKKETEETNFEEIKEQFSVEGGQVGKV 217
V+ V + ++Y+L ++ E +T + E S G+ G+
Sbjct: 82 EVIPVIDSTNQYLL-------------------ERIENLQTGHVCLAEYQSQGRGRRGRQ 122
Query: 218 WFDNSDKAFLVGQQWKVNCGVRA----QSVLNVGSVSCNDNPLRWGMNLRWPNNTWVMPS 273
WF + W+++ G+ A V+ + +V + G+ L+WPN+ +
Sbjct: 123 WFSPFGSNLYMSMYWRLDAGMAAAMGLSLVVGIAAVEALETLGVQGVKLKWPNDVYYQDK 182
Query: 274 LLTG 277
L G
Sbjct: 183 KLAG 186
>ref|XP_534667.1| PREDICTED: similar to ring finger protein 34 isoform 2 [Canis
familiaris]
Length = 406
Score = 38.5 bits (88), Expect = 0.49
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 28/134 (20%)
Query: 10 LVDSSIPITTSREITVLLD-GEIVKVMVEPDHSAGVYLASGMSSRNHKAMSEVSTSSSEH 68
L+ +IPI T RE L+D G+ + L SG+ ++ SE++++++E
Sbjct: 206 LILRNIPIDTCREKEDLVDLGDFM--------GGDQILGSGVLAQ---VQSEIASANTEE 254
Query: 69 EGDEPVDEGQRDDG-----VVVTPRVTEKQTSESIDDM--LEETVQHLREAGYSLEEIKD 121
E DE DE DD TP ++EK+ S+ D+ LE+ G S+ ++K+
Sbjct: 255 EDDEDDDEDDEDDDDEENLEERTPGLSEKRVRASLSDLSSLEDV------EGMSVRQLKE 308
Query: 122 LAVLKDWNFENFAG 135
+ NF N++G
Sbjct: 309 ILAR---NFVNYSG 319
>dbj|BAC04017.1| unnamed protein product [Homo sapiens]
Length = 662
Score = 38.5 bits (88), Expect = 0.49
Identities = 30/104 (28%), Positives = 51/104 (48%), Gaps = 15/104 (14%)
Query: 60 EVSTSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQTSESIDDMLEETVQHLREAGYSL--- 116
+++T+ + E EG R G++ P + +K T + + D++ V HL++ GY +
Sbjct: 222 DIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKK-GYMIVKC 280
Query: 117 ---EEIKDLAVLKD------WNFENFAGYR--LEEGIEEVECVA 149
+EI+D L + FEN +R LEEG V C+A
Sbjct: 281 RGQQEIQDQLSLSEALQREKIFFENHPYFRDLLEEGKATVPCLA 324
>gb|AAX41078.1| myxovirus resistance 1 [synthetic construct]
Length = 662
Score = 38.5 bits (88), Expect = 0.49
Identities = 30/104 (28%), Positives = 51/104 (48%), Gaps = 15/104 (14%)
Query: 60 EVSTSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQTSESIDDMLEETVQHLREAGYSL--- 116
+++T+ + E EG R G++ P + +K T + + D++ V HL++ GY +
Sbjct: 222 DIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKK-GYMIVKC 280
Query: 117 ---EEIKDLAVLKD------WNFENFAGYR--LEEGIEEVECVA 149
+EI+D L + FEN +R LEEG V C+A
Sbjct: 281 RGQQEIQDQLSLSEALQREKIFFENHPYFRDLLEEGKATVPCLA 324
>gb|AAX42653.1| myxovirus resistance 1 [synthetic construct]
gi|60825048|gb|AAX36704.1| myxovirus resistance 1
[synthetic construct]
Length = 663
Score = 38.5 bits (88), Expect = 0.49
Identities = 30/104 (28%), Positives = 51/104 (48%), Gaps = 15/104 (14%)
Query: 60 EVSTSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQTSESIDDMLEETVQHLREAGYSL--- 116
+++T+ + E EG R G++ P + +K T + + D++ V HL++ GY +
Sbjct: 222 DIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKK-GYMIVKC 280
Query: 117 ---EEIKDLAVLKD------WNFENFAGYR--LEEGIEEVECVA 149
+EI+D L + FEN +R LEEG V C+A
Sbjct: 281 RGQQEIQDQLSLSEALQREKIFFENHPYFRDLLEEGKATVPCLA 324
>gb|AAX36236.1| myxovirus resistance 1 [synthetic construct]
Length = 662
Score = 38.5 bits (88), Expect = 0.49
Identities = 30/104 (28%), Positives = 51/104 (48%), Gaps = 15/104 (14%)
Query: 60 EVSTSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQTSESIDDMLEETVQHLREAGYSL--- 116
+++T+ + E EG R G++ P + +K T + + D++ V HL++ GY +
Sbjct: 222 DIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKK-GYMIVKC 280
Query: 117 ---EEIKDLAVLKD------WNFENFAGYR--LEEGIEEVECVA 149
+EI+D L + FEN +R LEEG V C+A
Sbjct: 281 RGQQEIQDQLSLSEALQREKIFFENHPYFRDLLEEGKATVPCLA 324
>gb|AAH14222.2| MX1 protein [Homo sapiens]
Length = 578
Score = 38.5 bits (88), Expect = 0.49
Identities = 30/104 (28%), Positives = 51/104 (48%), Gaps = 15/104 (14%)
Query: 60 EVSTSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQTSESIDDMLEETVQHLREAGYSL--- 116
+++T+ + E EG R G++ P + +K T + + D++ V HL++ GY +
Sbjct: 138 DIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKK-GYMIVKC 196
Query: 117 ---EEIKDLAVLKD------WNFENFAGYR--LEEGIEEVECVA 149
+EI+D L + FEN +R LEEG V C+A
Sbjct: 197 RGQQEIQDQLSLSEALQREKIFFENHPYFRDLLEEGKATVPCLA 240
>gb|AAA36337.1| interferon-induced Mx protein
Length = 662
Score = 38.5 bits (88), Expect = 0.49
Identities = 30/104 (28%), Positives = 51/104 (48%), Gaps = 15/104 (14%)
Query: 60 EVSTSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQTSESIDDMLEETVQHLREAGYSL--- 116
+++T+ + E EG R G++ P + +K T + + D++ V HL++ GY +
Sbjct: 222 DIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKK-GYMIVKC 280
Query: 117 ---EEIKDLAVLKD------WNFENFAGYR--LEEGIEEVECVA 149
+EI+D L + FEN +R LEEG V C+A
Sbjct: 281 RGQQEIQDQLSLSEALQREKIFFENHPYFRDLLEEGKATVPCLA 324
>emb|CAA90093.1| Hypothetical protein C07E3.1a [Caenorhabditis elegans]
gi|17531589|ref|NP_496226.1| interacting protein (2K638)
[Caenorhabditis elegans] gi|7495607|pir||T19049
hypothetical protein C07E3.1a - Caenorhabditis elegans
Length = 816
Score = 38.1 bits (87), Expect = 0.64
Identities = 33/169 (19%), Positives = 69/169 (40%), Gaps = 14/169 (8%)
Query: 321 PRVSLHQIKKIARSTKGVAASPLNTLSGWDKKSDGSIENNLVVGVQACIGHTNVFAVEEI 380
P+ + Q+ RS+ A+ +N W + DG+ +N ++ + +G+
Sbjct: 105 PKQNGAQVFAGMRSSANHGAADINQFGSW-MRGDGN--SNKIMKMMQAMGYK-------- 153
Query: 381 DTEGFGLSDTEILDKVKQRRGRKKGGLGALRGRKTEAKPKPKRGRPRGSKAKPKQQVIDL 440
EG G I++ V+ + + +G +GA T PK K ++
Sbjct: 154 PGEGLGAQGQGIVEPVQAQLRKGRGAVGAYGKESTATGPKFGESAADAQKRMAQEGTSSR 213
Query: 441 PISDDDFEWEDASARARHTWKVAKQLGVVYKGREDEIVQRLEKQLRENH 489
P +DD E + + + +WK ++ + Y+ ED + + + +H
Sbjct: 214 PTNDDQ---EKSGLKIKGSWKKSQTVKTKYRTIEDVMEEGMSASRPASH 259
>emb|CAI59824.1| MIDAS-containing protein midasin [Nyctotherus ovalis]
Length = 208
Score = 38.1 bits (87), Expect = 0.64
Identities = 32/106 (30%), Positives = 50/106 (46%), Gaps = 19/106 (17%)
Query: 59 SEVSTSSSEHEGDEPVDEGQR-DDGVVVTPRVTEKQT-------SESIDDMLEETVQHLR 110
SE S SE E +E DEG+ ++ + + E+ T E+ID+++EE V+ +
Sbjct: 12 SEDEESESESEDEESEDEGEEVEEAEEIVEEIEEEATEQVEEEIEENIDEIVEEIVEDIL 71
Query: 111 EAGYSLEEIKDLAVLKDWNFENFAGYRLEEGIEEVECVAAVNECKE 156
+ G E ++A + E EEGIEE E V E +E
Sbjct: 72 DGG----EDSEIAEEVEEELE-------EEGIEEEELEEVVEETEE 106
>dbj|BAB84102.1| DNA topoisomerase II [Aspergillus niger]
Length = 1391
Score = 38.1 bits (87), Expect = 0.64
Identities = 31/78 (39%), Positives = 39/78 (49%), Gaps = 5/78 (6%)
Query: 386 GLSDTEILDKVKQRRGRKKGGLGALRGRKTEAKPKP-KRGRPRG-SKAKPKQQVIDLPIS 443
G SD EIL K + + + A TE K P KRGRP +KAKP ++ I+L
Sbjct: 1313 GESDVEILPKKSRAAPKAASKVKAEDPDSTEVKKAPAKRGRPAAKAKAKPAEEEIEL--- 1369
Query: 444 DDDFEWEDASARARHTWK 461
DDD E A+A T K
Sbjct: 1370 DDDEFMEITKAQAAETSK 1387
>ref|NP_999226.1| Mx protein [Sus scrofa] gi|127569|sp|P27594|MX1_PIG
Interferon-induced GTP-binding protein Mx1
gi|164592|gb|AAA31090.1| Mx protein
Length = 663
Score = 37.7 bits (86), Expect = 0.83
Identities = 29/104 (27%), Positives = 50/104 (47%), Gaps = 15/104 (14%)
Query: 60 EVSTSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQTSESIDDMLEETVQHLREAGYSLEEI 119
+++T+ + E EG R G++ P + +K T + I D+ V HL++ GY + +
Sbjct: 223 DIATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHLKK-GYMIVKC 281
Query: 120 K-------DLAVLKDWN-----FENFAGYR--LEEGIEEVECVA 149
+ L++ K FEN A +R LEEG + C+A
Sbjct: 282 RGQQDIQEQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLA 325
>dbj|BAD11809.1| Mx protein [Sus scrofa]
Length = 662
Score = 37.7 bits (86), Expect = 0.83
Identities = 29/104 (27%), Positives = 50/104 (47%), Gaps = 15/104 (14%)
Query: 60 EVSTSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQTSESIDDMLEETVQHLREAGYSLEEI 119
+++T+ + E EG R G++ P + +K T + I D+ V HL++ GY + +
Sbjct: 223 DIATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHLKK-GYMIVKC 281
Query: 120 K-------DLAVLKDWN-----FENFAGYR--LEEGIEEVECVA 149
+ L++ K FEN A +R LEEG + C+A
Sbjct: 282 RGQQDIQEQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLA 325
>emb|CAH86572.1| conserved hypothetical protein [Plasmodium chabaudi]
Length = 479
Score = 37.7 bits (86), Expect = 0.83
Identities = 44/170 (25%), Positives = 75/170 (43%), Gaps = 16/170 (9%)
Query: 51 SSRNHKAMSEVSTSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQTSESIDDMLEETVQHLR 110
+S + +A E+S S+ EPV+E + + V E+ E I+++ EE V+ +
Sbjct: 153 ASDSVEAPEEISEQDSDSTVVEPVEEVKEEQVEEVKVEPVEEVKEEQIEEVKEEPVEEEK 212
Query: 111 EAGYSLEEIKDLAV--LKDWNFENFAGYRL------------EEGIEEVECVAAVNECKE 156
E +EE+K+ V +K+ E ++ EE +EEV+ V V E KE
Sbjct: 213 EP-EPVEEVKEEQVEEVKEEQVEEEKEEQVEEVKEEPVEEVKEEQVEEVKEVEHVEEEKE 271
Query: 157 LAVVNVANGLSEYMLCNQIEAVNVHDDLINLKGTQKKETEETNFEEIKEQ 206
V E + +E V + + K +E +E EE+KE+
Sbjct: 272 EQVEEEKVEPVEEVKVEPVEEVK-EEQVEEEKVEPVEEVKEEQVEEVKEE 320
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.313 0.132 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 855,896,023
Number of Sequences: 2540612
Number of extensions: 37624054
Number of successful extensions: 87797
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 87739
Number of HSP's gapped (non-prelim): 118
length of query: 493
length of database: 863,360,394
effective HSP length: 132
effective length of query: 361
effective length of database: 527,999,610
effective search space: 190607859210
effective search space used: 190607859210
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)
Lotus: description of TM0383.6